Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:29:39 (1010): wrapper (7.7.26015): starting
16:29:39 (1010): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 16:29:39] Arguments: --nthreads 8
[2025-06-03 16:29:39] Threads: 8
[2025-06-03 16:29:39] Checking for CVMFS
[2025-06-03 16:29:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 16:29:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 16:29:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 16:29:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 16:29:41] 2.11.2.0 31392 31902 95444 146743 3 60 23754378 25165825 4634 130560 0 16682112 99.771 19040084 2001 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 16:29:41] CVMFS is ok
[2025-06-03 16:29:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 16:29:41] Checking for apptainer binary...
[2025-06-03 16:29:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 16:29:41] Running /usr/bin/apptainer --version
[2025-06-03 16:29:41] apptainer version 1.3.2-1.el7
[2025-06-03 16:29:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 16:58:56] cg-vwn267.simple-grid.lan
[2025-06-03 16:58:56] apptainer works
[2025-06-03 16:58:56] Set ATHENA_PROC_NUMBER=8
[2025-06-03 16:58:56] Set ATHENA_CORE_NUMBER=8
[2025-06-03 16:58:56] Starting ATLAS job with PandaID=6677454503
[2025-06-03 16:58:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:47:25]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:47:25] 2025-06-03 18:47:05,349 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 20:47:25] 2025-06-03 18:47:07,854 | INFO     | monitor loop #934: job 0:6677454503 is in state 'finished'
[2025-06-03 20:47:25] 2025-06-03 18:47:07,854 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 20:47:25] 2025-06-03 18:47:07,986 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 20:47:25] 2025-06-03 18:47:07,986 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6677454503/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:47:25] 2025-06-03 18:47:07,987 | INFO     | extracted standard info from prmon json
[2025-06-03 20:47:25] 2025-06-03 18:47:07,987 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:47:25] 2025-06-03 18:47:07,987 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:47:25] 2025-06-03 18:47:07,988 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:47:25] 2025-06-03 18:47:07,988 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:47:25] 2025-06-03 18:47:07,993 | INFO     | fitting pss+swap vs Time
[2025-06-03 20:47:25] 2025-06-03 18:47:07,994 | INFO     | sum of square deviations: 3438620752.0
[2025-06-03 20:47:25] 2025-06-03 18:47:07,996 | INFO     | sum of deviations: 35507786216.00001
[2025-06-03 20:47:25] 2025-06-03 18:47:07,996 | INFO     | mean x: 1748969593.0
[2025-06-03 20:47:25] 2025-06-03 18:47:07,996 | INFO     | mean y: 2481879.2959641255
[2025-06-03 20:47:25] 2025-06-03 18:47:07,996 | INFO     | -- intersect: -18057677377.990036
[2025-06-03 20:47:25] 2025-06-03 18:47:07,996 | INFO     | intersect: -18057677377.990036
[2025-06-03 20:47:25] 2025-06-03 18:47:07,997 | INFO     | chi2: 1.6980765495922918
[2025-06-03 20:47:25] 2025-06-03 18:47:07,997 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 20:47:25] 2025-06-03 18:47:07,999 | INFO     | sum of deviations: 34504944965.49999
[2025-06-03 20:47:25] 2025-06-03 18:47:07,999 | INFO     | mean x: 1748969440.5
[2025-06-03 20:47:25] 2025-06-03 18:47:07,999 | INFO     | mean y: 2481202.9403669727
[2025-06-03 20:47:25] 2025-06-03 18:47:07,999 | INFO     | -- intersect: -18783106826.419838
[2025-06-03 20:47:25] 2025-06-03 18:47:08,000 | INFO     | intersect: -18783106826.419838
[2025-06-03 20:47:25] 2025-06-03 18:47:08,000 | INFO     | chi2: 1.6991310904407624
[2025-06-03 20:47:25] 2025-06-03 18:47:08,000 | INFO     | current chi2=1.6991310904407624 (change=-0.062102079480678266 %)
[2025-06-03 20:47:25] 2025-06-03 18:47:08,000 | INFO     | right removable region: 217
[2025-06-03 20:47:25] 2025-06-03 18:47:08,001 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 20:47:25] 2025-06-03 18:47:08,003 | INFO     | sum of deviations: -3095258248.500001
[2025-06-03 20:47:25] 2025-06-03 18:47:08,003 | INFO     | mean x: 1748969745.5
[2025-06-03 20:47:25] 2025-06-03 18:47:08,003 | INFO     | mean y: 2507688.0504587158
[2025-06-03 20:47:25] 2025-06-03 18:47:08,003 | INFO     | -- intersect: 1687664887.9523695
[2025-06-03 20:47:25] 2025-06-03 18:47:08,003 | INFO     | intersect: 1687664887.9523695
[2025-06-03 20:47:25] 2025-06-03 18:47:08,003 | INFO     | chi2: 0.08257345341443822
[2025-06-03 20:47:25] 2025-06-03 18:47:08,004 | INFO     | current chi2=0.08257345341443822 (change=95.1372361019729 %)
[2025-06-03 20:47:25] 2025-06-03 18:47:08,004 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 20:47:25] 2025-06-03 18:47:08,006 | INFO     | sum of deviations: -1131517304.0000005
[2025-06-03 20:47:25] 2025-06-03 18:47:08,006 | INFO     | mean x: 1748969898.0
[2025-06-03 20:47:25] 2025-06-03 18:47:08,006 | INFO     | mean y: 2506264.4929577466
[2025-06-03 20:47:25] 2025-06-03 18:47:08,006 | INFO     | -- intersect: 662950072.7740825
[2025-06-03 20:47:25] 2025-06-03 18:47:08,006 | INFO     | intersect: 662950072.7740825
[2025-06-03 20:47:25] 2025-06-03 18:47:08,007 | INFO     | chi2: 0.06720630083858042
[2025-06-03 20:47:25] 2025-06-03 18:47:08,007 | INFO     | current chi2=0.06720630083858042 (change=18.610282046373523 %)
[2025-06-03 20:47:25] 2025-06-03 18:47:08,007 | INFO     | left removable region: 20
[2025-06-03 20:47:25] 2025-06-03 18:47:08,007 | INFO     | sum of square deviations: 2370641658.0
[2025-06-03 20:47:25] 2025-06-03 18:47:08,009 | INFO     | sum of deviations: 7800282280.0
[2025-06-03 20:47:25] 2025-06-03 18:47:08,009 | INFO     | mean x: 1748970020.0
[2025-06-03 20:47:25] 2025-06-03 18:47:08,009 | INFO     | mean y: 2498916.649746193
[2025-06-03 20:47:25] 2025-06-03 18:47:08,009 | INFO     | -- intersect: -5752255206.234754
[2025-06-03 20:47:25] 2025-06-03 18:47:08,009 | INFO     | intersect: -5752255206.234754
[2025-06-03 20:47:25] 2025-06-03 18:47:08,010 | INFO     | chi2: 0.0013832175285135142
[2025-06-03 20:47:25] 2025-06-03 18:47:08,010 | INFO     | -- intersect: -5752255206.234754
[2025-06-03 20:47:25] 2025-06-03 18:47:08,010 | INFO     | current memory leak: 3.29 B/s (using 197 data points, chi2=0.00)
[2025-06-03 20:47:25] 2025-06-03 18:47:08,011 | INFO     | ..............................
[2025-06-03 20:47:25] 2025-06-03 18:47:08,011 | INFO     | . Timing measurements:
[2025-06-03 20:47:25] 2025-06-03 18:47:08,011 | INFO     | . get job = 0 s
[2025-06-03 20:47:25] 2025-06-03 18:47:08,012 | INFO     | . initial setup = 2 s
[2025-06-03 20:47:25] 2025-06-03 18:47:08,012 | INFO     | . payload setup = 20 s
[2025-06-03 20:47:25] 2025-06-03 18:47:08,012 | INFO     | . stage-in = 0 s
[2025-06-03 20:47:25] 2025-06-03 18:47:08,012 | INFO     | . payload execution = 13602 s
[2025-06-03 20:47:25] 2025-06-03 18:47:08,012 | INFO     | . stage-out = 1 s
[2025-06-03 20:47:25] 2025-06-03 18:47:08,012 | INFO     | . log creation = 0 s
[2025-06-03 20:47:25] 2025-06-03 18:47:08,012 | INFO     | ..............................
[2025-06-03 20:47:25] 2025-06-03 18:47:08,144 | INFO     | 
[2025-06-03 20:47:25] 2025-06-03 18:47:08,144 | INFO     | job summary report
[2025-06-03 20:47:25] 2025-06-03 18:47:08,144 | INFO     | --------------------------------------------------
[2025-06-03 20:47:25] 2025-06-03 18:47:08,144 | INFO     | PanDA job id: 6677454503
[2025-06-03 20:47:25] 2025-06-03 18:47:08,145 | INFO     | task id: 45006595
[2025-06-03 20:47:25] 2025-06-03 18:47:08,145 | INFO     | errors: (none)
[2025-06-03 20:47:25] 2025-06-03 18:47:08,145 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:47:25] 2025-06-03 18:47:08,145 | INFO     | pilot state: finished 
[2025-06-03 20:47:25] 2025-06-03 18:47:08,145 | INFO     | transexitcode: 0
[2025-06-03 20:47:25] 2025-06-03 18:47:08,145 | INFO     | exeerrorcode: 0
[2025-06-03 20:47:25] 2025-06-03 18:47:08,145 | INFO     | exeerrordiag: 
[2025-06-03 20:47:25] 2025-06-03 18:47:08,145 | INFO     | exitcode: 0
[2025-06-03 20:47:25] 2025-06-03 18:47:08,145 | INFO     | exitmsg: OK
[2025-06-03 20:47:25] 2025-06-03 18:47:08,145 | INFO     | cpuconsumptiontime: 51317 s
[2025-06-03 20:47:25] 2025-06-03 18:47:08,145 | INFO     | nevents: 400
[2025-06-03 20:47:25] 2025-06-03 18:47:08,146 | INFO     | neventsw: 0
[2025-06-03 20:47:25] 2025-06-03 18:47:08,146 | INFO     | pid: 30206
[2025-06-03 20:47:25] 2025-06-03 18:47:08,146 | INFO     | pgrp: 30206
[2025-06-03 20:47:25] 2025-06-03 18:47:08,146 | INFO     | corecount: 8
[2025-06-03 20:47:25] 2025-06-03 18:47:08,146 | INFO     | event service: False
[2025-06-03 20:47:25] 2025-06-03 18:47:08,146 | INFO     | sizes: {0: 2405181, 1: 2405181, 8: 2405415, 12: 2405443, 13627: 2435205, 13630: 2444146, 13633: 2444330, 13647: 2444500}
[2025-06-03 20:47:25] 2025-06-03 18:47:08,146 | INFO     | --------------------------------------------------
[2025-06-03 20:47:25] 2025-06-03 18:47:08,146 | INFO     | 
[2025-06-03 20:47:25] 2025-06-03 18:47:08,146 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-03 20:47:25] 2025-06-03 18:47:08,219 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:47:25] 2025-06-03 18:47:08,220 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:47:25] 2025-06-03 18:47:08,220 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:47:25] 2025-06-03 18:47:08,220 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:47:25] 2025-06-03 18:47:08,220 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:47:25] 2025-06-03 18:47:08,220 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:47:25] 2025-06-03 18:47:08,220 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:47:25] 2025-06-03 18:47:08,221 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:47:25] 2025-06-03 18:47:08,221 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:47:25] 2025-06-03 18:47:08,221 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:47:25] 2025-06-03 18:47:08,221 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:47:25] 2025-06-03 18:47:08,221 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:47:25] 2025-06-03 18:47:08,221 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:47:25] 2025-06-03 18:47:08,221 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:47:25] 2025-06-03 18:47:08,221 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:47:25] 2025-06-03 18:47:08,221 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:47:25] 2025-06-03 18:47:08,221 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:47:25] 2025-06-03 18:47:08,222 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:47:25] 2025-06-03 18:47:08,222 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:47:25] 2025-06-03 18:47:08,222 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:47:25] 2025-06-03 18:47:08,222 | INFO     | job 6677454503 has completed (purged errors)
[2025-06-03 20:47:25] 2025-06-03 18:47:08,222 | INFO     | overall cleanup function is called
[2025-06-03 20:47:25] 2025-06-03 18:47:09,235 | INFO     | --- collectZombieJob: --- 10, [30206]
[2025-06-03 20:47:25] 2025-06-03 18:47:09,235 | INFO     | zombie collector waiting for pid 30206
[2025-06-03 20:47:25] 2025-06-03 18:47:09,235 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:47:25] 2025-06-03 18:47:09,235 | INFO     | collected zombie processes
[2025-06-03 20:47:25] 2025-06-03 18:47:09,235 | INFO     | will attempt to kill all subprocesses of pid=30206
[2025-06-03 20:47:25] 2025-06-03 18:47:09,336 | INFO     | process IDs to be killed: [30206] (in reverse order)
[2025-06-03 20:47:25] 2025-06-03 18:47:09,495 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:47:25] 2025-06-03 18:47:09,496 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:47:25] 2025-06-03 18:47:09,499 | INFO     | did not find any defunct processes belonging to 30206
[2025-06-03 20:47:25] 2025-06-03 18:47:09,502 | INFO     | did not find any defunct processes belonging to 30206
[2025-06-03 20:47:25] 2025-06-03 18:47:09,503 | INFO     | ready for new job
[2025-06-03 20:47:25] 2025-06-03 18:47:09,503 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:47:25] 2025-06-03 18:47:09,505 | INFO     | **************************************
[2025-06-03 20:47:25] 2025-06-03 18:47:09,505 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:47:25] 2025-06-03 18:47:09,505 | INFO     | **************************************
[2025-06-03 20:47:25] 2025-06-03 18:47:09,505 | INFO     | 
[2025-06-03 20:47:25] 2025-06-03 18:47:09,506 | INFO     | pilot is running in a VM
[2025-06-03 20:47:25] 2025-06-03 18:47:09,506 | INFO     | architecture information:
[2025-06-03 20:47:25] 2025-06-03 18:47:09,512 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:47:25] 2025-06-03 18:47:09,632 | INFO     | cat /etc/os-release:
[2025-06-03 20:47:25] NAME="CentOS Linux"
[2025-06-03 20:47:25] VERSION="7 (Core)"
[2025-06-03 20:47:25] ID="centos"
[2025-06-03 20:47:25] ID_LIKE="rhel fedora"
[2025-06-03 20:47:25] VERSION_ID="7"
[2025-06-03 20:47:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:47:25] ANSI_COLOR="0;31"
[2025-06-03 20:47:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:47:25] HOME_URL="https://www.centos.org/"
[2025-06-03 20:47:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:47:25] 
[2025-06-03 20:47:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:47:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:47:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:47:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:47:25] 
[2025-06-03 20:47:25] 2025-06-03 18:47:09,632 | INFO     | **************************************
[2025-06-03 20:47:25] 2025-06-03 18:47:10,136 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-03 20:47:25] 2025-06-03 18:47:10,278 | INFO     | sufficient remaining disk space (497155047424 B)
[2025-06-03 20:47:25] 2025-06-03 18:47:10,278 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:47:25] 2025-06-03 18:47:10,279 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:47:25] 2025-06-03 18:47:10,279 | INFO     | update_server=False
[2025-06-03 20:47:25] 2025-06-03 18:47:10,279 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:47:25] 2025-06-03 18:47:10,368 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 20:47:25] 2025-06-03 18:47:10,368 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 20:47:25] 2025-06-03 18:47:10,368 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:47:25] 2025-06-03 18:47:10,369 | INFO     | will abort loop
[2025-06-03 20:47:25] 2025-06-03 18:47:10,394 | INFO     | all payload control threads have been joined
[2025-06-03 20:47:25] 2025-06-03 18:47:10,983 | INFO     | all data control threads have been joined
[2025-06-03 20:47:25] 2025-06-03 18:47:11,066 | INFO     | PID=15748 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 20:47:25] 2025-06-03 18:47:11,066 | INFO     | .. there are 8 such processes running
[2025-06-03 20:47:25] 2025-06-03 18:47:11,066 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:47:25] 2025-06-03 18:47:11,066 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:47:25] 2025-06-03 18:47:11,066 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:47:25] 2025-06-03 18:47:11,285 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:47:25] 2025-06-03 18:47:11,374 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:47:25] 2025-06-03 18:47:11,400 | INFO     | [payload] control thread has finished
[2025-06-03 20:47:25] 2025-06-03 18:47:11,454 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:47:25] 2025-06-03 18:47:11,497 | INFO     | all job control threads have been joined
[2025-06-03 20:47:25] 2025-06-03 18:47:11,560 | INFO     | [job] validate thread has finished
[2025-06-03 20:47:25] 2025-06-03 18:47:11,631 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:47:25] 2025-06-03 18:47:11,902 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:47:25] 2025-06-03 18:47:11,989 | INFO     | [data] control thread has finished
[2025-06-03 20:47:25] 2025-06-03 18:47:12,472 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:47:25] 2025-06-03 18:47:12,481 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:47:25] 2025-06-03 18:47:12,503 | INFO     | [job] control thread has finished
[2025-06-03 20:47:25] 2025-06-03 18:47:12,591 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:47:25] 2025-06-03 18:47:12,634 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:47:25] 2025-06-03 18:47:12,683 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:47:25] 2025-06-03 18:47:13,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:47:25] 2025-06-03 18:47:13,195 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:47:25] 2025-06-03 18:47:13,461 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:47:25] 2025-06-03 18:47:14,162 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:47:25] 2025-06-03 18:47:17,205 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:47:25] 2025-06-03 18:47:17,568 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695658563392)>', '<ExcThread(monitor, started 139695431665408)>']
[2025-06-03 20:47:25] 2025-06-03 18:47:18,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:47:25] 2025-06-03 18:47:18,108 | INFO     | [monitor] control thread has ended
[2025-06-03 20:47:25] 2025-06-03 18:47:22,594 | INFO     | all workflow threads have been joined
[2025-06-03 20:47:25] 2025-06-03 18:47:22,594 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:47:25] 2025-06-03 18:47:22,594 | INFO     | traces error code: 0
[2025-06-03 20:47:25] 2025-06-03 18:47:22,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:47:25] 2025-06-03 18:47:22,870 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:47:25] 2025-06-03 18:47:22,907 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:47:25] 2025-06-03 18:47:22,955 [wrapper] pilotpid: 15748
[2025-06-03 20:47:25] 2025-06-03 18:47:22,970 [wrapper] Pilot exit status: 0
[2025-06-03 20:47:25] 2025-06-03 18:47:23,288 [wrapper] pandaids: 6677454503
[2025-06-03 20:47:25] 2025-06-03 18:47:23,417 [wrapper] cleanup supervisor_pilot 21896 15749
[2025-06-03 20:47:25] 2025-06-03 18:47:23,433 [wrapper] Test setup, not cleaning
[2025-06-03 20:47:25] 2025-06-03 18:47:23,462 [wrapper] apfmon messages muted
[2025-06-03 20:47:25] 2025-06-03 18:47:23,466 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:47:25] 2025-06-03 18:47:23,469 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:47:25]  *** Error codes and diagnostics ***
[2025-06-03 20:47:25]     "exeErrorCode": 0,
[2025-06-03 20:47:25]     "exeErrorDiag": "",
[2025-06-03 20:47:25]     "pilotErrorCode": 0,
[2025-06-03 20:47:25]     "pilotErrorDiag": "",
[2025-06-03 20:47:25]  *** Listing of results directory ***
[2025-06-03 20:47:25] total 392496
[2025-06-03 20:47:25] -rw-r--r--. 1 boinc boinc    495897 Jun  3 04:50 pilot3.tar.gz
[2025-06-03 20:47:25] -rw-r--r--. 1 boinc boinc      5111 Jun  3 04:58 queuedata.json
[2025-06-03 20:47:25] -rwx------. 1 boinc boinc     37140 Jun  3 04:59 runpilot2-wrapper.sh
[2025-06-03 20:47:25] -rw-r--r--. 1 boinc boinc       100 Jun  3 16:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:47:25] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 16:29 run_atlas
[2025-06-03 20:47:25] -rw-r--r--. 1 boinc boinc       105 Jun  3 16:29 job.xml
[2025-06-03 20:47:25] -rw-r--r--. 1 boinc boinc      6391 Jun  3 16:29 init_data.xml
[2025-06-03 20:47:25] -rw-r--r--. 2 boinc boinc 213377590 Jun  3 16:29 EVNT.45006593._000719.pool.root.1
[2025-06-03 20:47:25] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:29 start_atlas.sh
[2025-06-03 20:47:25] drwxrwx--x. 2 boinc boinc        68 Jun  3 16:29 shared
[2025-06-03 20:47:25] -rw-r--r--. 2 boinc boinc    508880 Jun  3 16:29 input.tar.gz
[2025-06-03 20:47:25] -rw-r--r--. 1 boinc boinc         0 Jun  3 16:29 boinc_lockfile
[2025-06-03 20:47:25] -rw-r--r--. 1 boinc boinc      2523 Jun  3 16:58 pandaJob.out
[2025-06-03 20:47:25] -rw-------. 1 boinc boinc    982724 Jun  3 16:59 agis_schedconf.cvmfs.json
[2025-06-03 20:47:25] drwx------. 4 boinc boinc      4096 Jun  3 16:59 pilot3
[2025-06-03 20:47:25] -rw-------. 1 boinc boinc 181604080 Jun  3 20:46 HITS.45006595._017958.pool.root.1
[2025-06-03 20:47:25] -rw-r--r--. 1 boinc boinc       531 Jun  3 20:46 boinc_task_state.xml
[2025-06-03 20:47:25] -rw-------. 1 boinc boinc      1018 Jun  3 20:46 memory_monitor_summary.json
[2025-06-03 20:47:25] -rw-------. 1 boinc boinc   1603667 Jun  3 20:46 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:47:25] -rw-------. 1 boinc boinc    373796 Jun  3 20:46 log.45006595._017958.job.log.tgz.1
[2025-06-03 20:47:25] -rw-------. 1 boinc boinc        95 Jun  3 20:46 pilot_heartbeat.json
[2025-06-03 20:47:25] -rw-------. 1 boinc boinc      7683 Jun  3 20:47 heartbeat.json
[2025-06-03 20:47:25] -rw-r--r--. 1 boinc boinc      8192 Jun  3 20:47 boinc_mmap_file
[2025-06-03 20:47:25] -rw-r--r--. 1 boinc boinc        28 Jun  3 20:47 wrapper_checkpoint.txt
[2025-06-03 20:47:25] -rw-------. 1 boinc boinc      4994 Jun  3 20:47 pilotlog.txt
[2025-06-03 20:47:25] -rw-------. 1 boinc boinc   1183868 Jun  3 20:47 log.45006595._017958.job.log.1
[2025-06-03 20:47:25] -rw-------. 1 boinc boinc       357 Jun  3 20:47 output.list
[2025-06-03 20:47:25] -rw-r--r--. 1 boinc boinc       620 Jun  3 20:47 runtime_log
[2025-06-03 20:47:25] -rw-------. 1 boinc boinc   1576960 Jun  3 20:47 result.tar.gz
[2025-06-03 20:47:25] -rw-r--r--. 1 boinc boinc      8659 Jun  3 20:47 runtime_log.err
[2025-06-03 20:47:25] -rw-------. 1 boinc boinc       656 Jun  3 20:47 kNaLDmB3Wg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVhhKDm9Lb3Wn.diag
[2025-06-03 20:47:25] -rw-r--r--. 1 boinc boinc     20798 Jun  3 20:47 stderr.txt
[2025-06-03 20:47:25] HITS file was successfully produced:
[2025-06-03 20:47:25] -rw-------. 1 boinc boinc 181604080 Jun  3 20:46 shared/HITS.pool.root.1
[2025-06-03 20:47:25]  *** Contents of shared directory: ***
[2025-06-03 20:47:25] total 387784
[2025-06-03 20:47:25] -rw-r--r--. 2 boinc boinc 213377590 Jun  3 16:29 ATLAS.root_0
[2025-06-03 20:47:25] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:29 start_atlas.sh
[2025-06-03 20:47:25] -rw-r--r--. 2 boinc boinc    508880 Jun  3 16:29 input.tar.gz
[2025-06-03 20:47:25] -rw-------. 1 boinc boinc 181604080 Jun  3 20:46 HITS.pool.root.1
[2025-06-03 20:47:25] -rw-------. 1 boinc boinc   1576960 Jun  3 20:47 result.tar.gz
20:47:27 (1010): run_atlas exited; CPU time 51494.798714
20:47:27 (1010): called boinc_finish(0)

</stderr_txt>
]]>

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