Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:14:03 (561164): wrapper (7.7.26015): starting
23:14:03 (561164): wrapper: running run_atlas (--nthreads 12)
[2025-06-02 23:14:03] Arguments: --nthreads 12
[2025-06-02 23:14:03] Threads: 12
[2025-06-02 23:14:03] Checking for CVMFS
[2025-06-02 23:14:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 23:14:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 23:14:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 23:14:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 23:14:05] 2.11.5.0 2315690 31258 265604 146731 2 854 30688836 45568000 18159 130560 0 254931501 99.775 173843484 29481 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-02 23:14:05] CVMFS is ok
[2025-06-02 23:14:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 23:14:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 23:14:05] Further information can be found at the LHC@home message board.
[2025-06-02 23:14:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 23:14:05] Checking for apptainer binary...
[2025-06-02 23:14:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 23:14:05] Running /usr/bin/apptainer --version
[2025-06-02 23:14:05] apptainer version 1.4.0-1.el9
[2025-06-02 23:14:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 23:14:06] wns0052.triumf.lcg
[2025-06-02 23:14:06] apptainer works
[2025-06-02 23:14:06] Set ATHENA_PROC_NUMBER=12
[2025-06-02 23:14:06] Set ATHENA_CORE_NUMBER=12
[2025-06-02 23:14:06] Starting ATLAS job with PandaID=6677469333
[2025-06-02 23:14:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 23:19:35]  *** The last 200 lines of the pilot log: ***
[2025-06-02 23:19:35] 2025-06-03 06:19:20,244 | INFO     | extracted standard info from prmon json
[2025-06-02 23:19:35] 2025-06-03 06:19:20,244 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 23:19:35] 2025-06-03 06:19:20,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 23:19:35] 2025-06-03 06:19:20,245 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 23:19:35] 2025-06-03 06:19:20,245 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | WARNING  | wrong length of table data, x=[1748931371.0], y=[2683.0] (must be same and length>=4)
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | ..............................
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . Timing measurements:
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . get job = 0 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . initial setup = 5 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . payload setup = 33 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . stage-in = 0 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . payload execution = 50 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . stage-out = 1 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . log creation = 0 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | ..............................
[2025-06-02 23:19:35] 2025-06-03 06:19:20,277 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 23:19:35] 2025-06-03 06:19:20,277 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677469333/pilotlog.txt
[2025-06-02 23:19:35] 2025-06-03 06:19:20,359 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-02 23:19:35] - Log from pilotlog.txt -
[2025-06-02 23:19:35] 2025-06-03 06:19:20,243 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-02 23:19:35] 2025-06-03 06:19:20,243 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677469333/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 23:19:35] 2025-06-03 06:19:20,244 | INFO     | extracted standard info from prmon json
[2025-06-02 23:19:35] 2025-06-03 06:19:20,244 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 23:19:35] 2025-06-03 06:19:20,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 23:19:35] 2025-06-03 06:19:20,245 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 23:19:35] 2025-06-03 06:19:20,245 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | WARNING  | wrong length of table data, x=[1748931371.0], y=[2683.0] (must be same and length>=4)
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | ..............................
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . Timing measurements:
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . get job = 0 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . initial setup = 5 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . payload setup = 33 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . stage-in = 0 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . payload execution = 50 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . stage-out = 1 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . log creation = 0 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | ..............................
[2025-06-02 23:19:35] 2025-06-03 06:19:20,277 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 23:19:35] 2025-06-03 06:19:20,277 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677469333/pilotlog.txt
[2025-06-02 23:19:35] 2025-06-03 06:19:20,359 | WARNING  | 
[2025-06-02 23:19:35] [begin log extracts]
[2025-06-02 23:19:35] - Log from pilotlog.txt -
[2025-06-02 23:19:35] 2025-06-03 06:19:20,243 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-02 23:19:35] 2025-06-03 06:19:20,243 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677469333/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 23:19:35] 2025-06-03 06:19:20,244 | INFO     | extracted standard info from prmon json
[2025-06-02 23:19:35] 2025-06-03 06:19:20,244 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 23:19:35] 2025-06-03 06:19:20,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 23:19:35] 2025-06-03 06:19:20,245 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 23:19:35] 2025-06-03 06:19:20,245 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | WARNING  | wrong length of table data, x=[1748931371.0], y=[2683.0] (must be same and length>=4)
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | ..............................
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . Timing measurements:
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . get job = 0 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . initial setup = 5 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . payload setup = 33 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . stage-in = 0 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . payload execution = 50 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . stage-out = 1 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | . log creation = 0 s
[2025-06-02 23:19:35] 2025-06-03 06:19:20,246 | INFO     | ..............................
[2025-06-02 23:19:35] 2025-06-03 06:19:20,277 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 23:19:35] 2025-06-03 06:19:20,277 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677469333/pilotlog.txt
[2025-06-02 23:19:35] [end log extracts]
[2025-06-02 23:19:35] 2025-06-03 06:19:20,360 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-02 23:19:35] 2025-06-03 06:19:20,360 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-02 23:19:35] 2025-06-03 06:19:21,021 | INFO     | 
[2025-06-02 23:19:35] 2025-06-03 06:19:21,021 | INFO     | job summary report
[2025-06-02 23:19:35] 2025-06-03 06:19:21,021 | INFO     | --------------------------------------------------
[2025-06-02 23:19:35] 2025-06-03 06:19:21,021 | INFO     | PanDA job id: 6677469333
[2025-06-02 23:19:35] 2025-06-03 06:19:21,022 | INFO     | task id: 45006595
[2025-06-02 23:19:35] 2025-06-03 06:19:21,022 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-02 23:16:42,982 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-02 23:19:35] 2025-06-03 06:19:21,022 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 23:19:35] 2025-06-03 06:19:21,022 | INFO     | pilot state: failed 
[2025-06-02 23:19:35] 2025-06-03 06:19:21,022 | INFO     | transexitcode: 65
[2025-06-02 23:19:35] 2025-06-03 06:19:21,022 | INFO     | exeerrorcode: 65
[2025-06-02 23:19:35] 2025-06-03 06:19:21,022 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 23:19:35] 2025-06-03 06:19:21,022 | INFO     | exitcode: 65
[2025-06-02 23:19:35] 2025-06-03 06:19:21,022 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 23:19:35] 2025-06-03 06:19:21,022 | INFO     | cpuconsumptiontime: 21 s
[2025-06-02 23:19:35] 2025-06-03 06:19:21,022 | INFO     | nevents: 0
[2025-06-02 23:19:35] 2025-06-03 06:19:21,022 | INFO     | neventsw: 0
[2025-06-02 23:19:35] 2025-06-03 06:19:21,022 | INFO     | pid: 586267
[2025-06-02 23:19:35] 2025-06-03 06:19:21,022 | INFO     | pgrp: 586267
[2025-06-02 23:19:35] 2025-06-03 06:19:21,022 | INFO     | corecount: 12
[2025-06-02 23:19:35] 2025-06-03 06:19:21,023 | INFO     | event service: False
[2025-06-02 23:19:35] 2025-06-03 06:19:21,023 | INFO     | sizes: {0: 2405008, 1: 2405179, 2: 2405207, 13: 2405235, 19: 2405497, 23: 2405525, 87: 2428804, 90: 2433039, 92: 2433067, 236: 2433209}
[2025-06-02 23:19:35] 2025-06-03 06:19:21,023 | INFO     | --------------------------------------------------
[2025-06-02 23:19:35] 2025-06-03 06:19:21,023 | INFO     | 
[2025-06-02 23:19:35] 2025-06-03 06:19:21,023 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-02 23:19:35] 2025-06-03 06:19:21,212 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 23:19:35] 2025-06-03 06:19:21,212 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 23:19:35] 2025-06-03 06:19:21,212 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 23:19:35] 2025-06-03 06:19:21,213 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 23:19:35] 2025-06-03 06:19:21,213 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 23:19:35] 2025-06-03 06:19:21,213 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 23:19:35] 2025-06-03 06:19:21,213 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 23:19:35] 2025-06-03 06:19:21,213 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 23:19:35] 2025-06-03 06:19:21,213 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 23:19:35] 2025-06-03 06:19:21,213 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 23:19:35] 2025-06-03 06:19:21,213 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 23:19:35] 2025-06-03 06:19:21,213 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 23:19:35] 2025-06-03 06:19:21,213 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 23:19:35] 2025-06-03 06:19:21,213 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 23:19:35] 2025-06-03 06:19:21,213 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 23:19:35] 2025-06-03 06:19:21,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 23:19:35] 2025-06-03 06:19:21,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 23:19:35] 2025-06-03 06:19:21,213 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 23:19:35] 2025-06-03 06:19:21,214 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 23:19:35] 2025-06-03 06:19:21,214 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 23:19:35] 2025-06-03 06:19:21,214 | INFO     | job 6677469333 has completed (purged errors)
[2025-06-02 23:19:35] 2025-06-03 06:19:21,214 | INFO     | overall cleanup function is called
[2025-06-02 23:19:35] 2025-06-03 06:19:22,238 | INFO     | --- collectZombieJob: --- 10, [586267]
[2025-06-02 23:19:35] 2025-06-03 06:19:22,238 | INFO     | zombie collector waiting for pid 586267
[2025-06-02 23:19:35] 2025-06-03 06:19:22,238 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 23:19:35] 2025-06-03 06:19:22,238 | INFO     | collected zombie processes
[2025-06-02 23:19:35] 2025-06-03 06:19:22,238 | INFO     | will attempt to kill all subprocesses of pid=586267
[2025-06-02 23:19:35] 2025-06-03 06:19:22,633 | INFO     | process IDs to be killed: [586267] (in reverse order)
[2025-06-02 23:19:35] 2025-06-03 06:19:22,749 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 23:19:35] 2025-06-03 06:19:22,750 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 23:19:35] 2025-06-03 06:19:22,783 | INFO     | did not find any defunct processes belonging to 586267
[2025-06-02 23:19:35] 2025-06-03 06:19:22,820 | INFO     | did not find any defunct processes belonging to 586267
[2025-06-02 23:19:35] 2025-06-03 06:19:22,821 | INFO     | ready for new job
[2025-06-02 23:19:35] 2025-06-03 06:19:22,821 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 23:19:35] 2025-06-03 06:19:22,827 | INFO     | **************************************
[2025-06-02 23:19:35] 2025-06-03 06:19:22,827 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 23:19:35] 2025-06-03 06:19:22,827 | INFO     | **************************************
[2025-06-02 23:19:35] 2025-06-03 06:19:22,828 | INFO     | 
[2025-06-02 23:19:35] 2025-06-03 06:19:22,836 | INFO     | architecture information:
[2025-06-02 23:19:35] 2025-06-03 06:19:22,843 | INFO     | executing command: cat /etc/os-release
[2025-06-02 23:19:35] 2025-06-03 06:19:22,906 | INFO     | cat /etc/os-release:
[2025-06-02 23:19:35] NAME="CentOS Linux"
[2025-06-02 23:19:35] VERSION="7 (Core)"
[2025-06-02 23:19:35] ID="centos"
[2025-06-02 23:19:35] ID_LIKE="rhel fedora"
[2025-06-02 23:19:35] VERSION_ID="7"
[2025-06-02 23:19:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 23:19:35] ANSI_COLOR="0;31"
[2025-06-02 23:19:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 23:19:35] HOME_URL="https://www.centos.org/"
[2025-06-02 23:19:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 23:19:35] 
[2025-06-02 23:19:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 23:19:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 23:19:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 23:19:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 23:19:35] 
[2025-06-02 23:19:35] 2025-06-03 06:19:22,906 | INFO     | **************************************
[2025-06-02 23:19:35] 2025-06-03 06:19:23,410 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-02 23:19:35] 2025-06-03 06:19:23,505 | INFO     | sufficient remaining disk space (1813874999296 B)
[2025-06-02 23:19:35] 2025-06-03 06:19:23,505 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 23:19:35] 2025-06-03 06:19:23,506 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 23:19:35] 2025-06-03 06:19:23,506 | INFO     | update_server=False
[2025-06-02 23:19:35] 2025-06-03 06:19:23,506 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 23:19:35] 2025-06-03 06:19:23,509 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 23:19:35] 2025-06-03 06:19:23,550 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-02 23:19:35] 2025-06-03 06:19:23,550 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-02 23:19:35] 2025-06-03 06:19:23,550 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 23:19:35] 2025-06-03 06:19:23,550 | INFO     | will abort loop
[2025-06-02 23:19:35] 2025-06-03 06:19:23,595 | INFO     | all payload control threads have been joined
[2025-06-02 23:19:35] 2025-06-03 06:19:23,805 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 23:19:35] 2025-06-03 06:19:23,814 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 23:19:35] 2025-06-03 06:19:23,814 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 23:19:35] 2025-06-03 06:19:23,814 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 23:19:35] 2025-06-03 06:19:24,512 | INFO     | [job] retrieve thread has finished
[2025-06-02 23:19:35] 2025-06-03 06:19:24,523 | INFO     | [payload] failed_post thread has finished
[2025-06-02 23:19:35] 2025-06-03 06:19:24,546 | INFO     | all data control threads have been joined
[2025-06-02 23:19:35] 2025-06-03 06:19:24,556 | INFO     | [job] job monitor thread has finished
[2025-06-02 23:19:35] 2025-06-03 06:19:24,601 | INFO     | [payload] control thread has finished
[2025-06-02 23:19:35] 2025-06-03 06:19:24,603 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 23:19:35] 2025-06-03 06:19:24,690 | INFO     | all job control threads have been joined
[2025-06-02 23:19:35] 2025-06-03 06:19:25,073 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 23:19:35] 2025-06-03 06:19:25,088 | INFO     | [data] copytool_in thread has finished
[2025-06-02 23:19:35] 2025-06-03 06:19:25,192 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 23:19:35] 2025-06-03 06:19:25,328 | INFO     | [payload] validate_post thread has finished
[2025-06-02 23:19:35] 2025-06-03 06:19:25,344 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 23:19:35] 2025-06-03 06:19:25,559 | INFO     | [data] control thread has finished
[2025-06-02 23:19:35] 2025-06-03 06:19:25,629 | INFO     | [job] validate thread has finished
[2025-06-02 23:19:35] 2025-06-03 06:19:25,697 | INFO     | [job] control thread has finished
[2025-06-02 23:19:35] 2025-06-03 06:19:25,816 | INFO     | [data] copytool_out thread has finished
[2025-06-02 23:19:35] 2025-06-03 06:19:26,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 23:19:35] 2025-06-03 06:19:27,009 | INFO     | [job] queue monitor thread has finished
[2025-06-02 23:19:35] 2025-06-03 06:19:27,523 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 23:19:35] 2025-06-03 06:19:28,920 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139866367465280)>', '<ExcThread(monitor, started 139865979074304)>']
[2025-06-02 23:19:35] 2025-06-03 06:19:29,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 23:19:35] 2025-06-03 06:19:29,853 | INFO     | [monitor] control thread has ended
[2025-06-02 23:19:35] 2025-06-03 06:19:33,946 | INFO     | all workflow threads have been joined
[2025-06-02 23:19:35] 2025-06-03 06:19:33,946 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 23:19:35] 2025-06-03 06:19:33,946 | INFO     | traces error code: 0
[2025-06-02 23:19:35] 2025-06-03 06:19:33,946 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 23:19:35] 2025-06-03 06:19:34,440 [wrapper] ==== pilot stdout END ====
[2025-06-02 23:19:35] 2025-06-03 06:19:34,453 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 23:19:35] 2025-06-03 06:19:34,468 [wrapper] pilotpid: 575935
[2025-06-02 23:19:35] 2025-06-03 06:19:34,503 [wrapper] Pilot exit status: 0
[2025-06-02 23:19:35] 2025-06-03 06:19:34,591 [wrapper] pandaids: 6677469333
[2025-06-02 23:19:35] 2025-06-03 06:19:35,161 [wrapper] cleanup supervisor_pilot  575941 575936
[2025-06-02 23:19:35] 2025-06-03 06:19:35,194 [wrapper] Test setup, not cleaning
[2025-06-02 23:19:35] 2025-06-03 06:19:35,203 [wrapper] apfmon messages muted
[2025-06-02 23:19:35] 2025-06-03 06:19:35,208 [wrapper] ==== wrapper stdout END ====
[2025-06-02 23:19:35] 2025-06-03 06:19:35,214 [wrapper] ==== wrapper stderr END ====
[2025-06-02 23:19:35]  *** Error codes and diagnostics ***
[2025-06-02 23:19:35]     "exeErrorCode": 65,
[2025-06-02 23:19:35]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 23:19:35]     "pilotErrorCode": 1305,
[2025-06-02 23:19:35]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 23:19:35]  *** Listing of results directory ***
[2025-06-02 23:19:35] total 216272
[2025-06-02 23:19:35] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:53 pilot3.tar.gz
[2025-06-02 23:19:35] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:58 queuedata.json
[2025-06-02 23:19:35] -rwx------. 1 boinc boinc     37140 Jun  2 21:58 runpilot2-wrapper.sh
[2025-06-02 23:19:35] -rw-r--r--. 1 boinc boinc       100 Jun  2 23:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 23:19:35] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 23:14 run_atlas
[2025-06-02 23:19:35] -rw-r--r--. 1 boinc boinc       105 Jun  2 23:14 job.xml
[2025-06-02 23:19:35] -rw-r--r--. 1 boinc boinc      6596 Jun  2 23:14 init_data.xml
[2025-06-02 23:19:35] -rw-r--r--. 2 boinc boinc 217425518 Jun  2 23:14 EVNT.45006593._000802.pool.root.1
[2025-06-02 23:19:35] -rw-r--r--. 2 boinc boinc     15093 Jun  2 23:14 start_atlas.sh
[2025-06-02 23:19:35] drwxrwx--x. 2 boinc boinc      4096 Jun  2 23:14 shared
[2025-06-02 23:19:35] -rw-r--r--. 2 boinc boinc    508878 Jun  2 23:14 input.tar.gz
[2025-06-02 23:19:35] -rw-r--r--. 1 boinc boinc         0 Jun  2 23:14 boinc_lockfile
[2025-06-02 23:19:35] -rw-r--r--. 1 boinc boinc      2524 Jun  2 23:14 pandaJob.out
[2025-06-02 23:19:35] -rw-------. 1 boinc boinc    986901 Jun  2 23:14 agis_schedconf.cvmfs.json
[2025-06-02 23:19:35] -rw-------. 1 boinc boinc   1603667 Jun  2 23:14 agis_ddmendpoints.agis.ALL.json
[2025-06-02 23:19:35] drwx------. 4 boinc boinc      4096 Jun  2 23:14 pilot3
[2025-06-02 23:19:35] -rw-------. 1 boinc boinc       962 Jun  2 23:16 memory_monitor_summary.json
[2025-06-02 23:19:35] -rw-------. 1 boinc boinc     20371 Jun  2 23:16 log.45006595._020034.job.log.tgz.1
[2025-06-02 23:19:35] -rw-------. 1 boinc boinc        95 Jun  2 23:18 pilot_heartbeat.json
[2025-06-02 23:19:35] -rw-------. 1 boinc boinc      8311 Jun  2 23:19 heartbeat.json
[2025-06-02 23:19:35] -rw-r--r--. 1 boinc boinc       524 Jun  2 23:19 boinc_task_state.xml
[2025-06-02 23:19:35] -rw-r--r--. 1 boinc boinc        23 Jun  2 23:19 wrapper_checkpoint.txt
[2025-06-02 23:19:35] -rw-------. 1 boinc boinc      4538 Jun  2 23:19 pilotlog.txt
[2025-06-02 23:19:35] -rw-------. 1 boinc boinc     81552 Jun  2 23:19 log.45006595._020034.job.log.1
[2025-06-02 23:19:35] -rw-------. 1 boinc boinc       188 Jun  2 23:19 output.list
[2025-06-02 23:19:35] -rw-r--r--. 1 boinc boinc       620 Jun  2 23:19 runtime_log
[2025-06-02 23:19:35] -rw-------. 1 boinc boinc    122880 Jun  2 23:19 result.tar.gz
[2025-06-02 23:19:35] -rw-------. 1 boinc boinc       645 Jun  2 23:19 sXMNDmguYg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmr3hKDmDMBZJm.diag
[2025-06-02 23:19:35] -rw-r--r--. 1 boinc boinc      8484 Jun  2 23:19 runtime_log.err
[2025-06-02 23:19:35] -rw-r--r--. 1 boinc boinc      8192 Jun  2 23:19 boinc_mmap_file
[2025-06-02 23:19:35] -rw-r--r--. 1 boinc boinc     21630 Jun  2 23:19 stderr.txt
[2025-06-02 23:19:35] No HITS result produced
[2025-06-02 23:19:35]  *** Contents of shared directory: ***
[2025-06-02 23:19:35] total 212972
[2025-06-02 23:19:35] -rw-r--r--. 2 boinc boinc 217425518 Jun  2 23:14 ATLAS.root_0
[2025-06-02 23:19:35] -rw-r--r--. 2 boinc boinc     15093 Jun  2 23:14 start_atlas.sh
[2025-06-02 23:19:35] -rw-r--r--. 2 boinc boinc    508878 Jun  2 23:14 input.tar.gz
[2025-06-02 23:19:35] -rw-------. 1 boinc boinc    122880 Jun  2 23:19 result.tar.gz
23:19:37 (561164): run_atlas exited; CPU time 32.322943
23:19:37 (561164): called boinc_finish(0)

</stderr_txt>
]]>

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