Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:27:30 (1114614): wrapper (7.7.26015): starting
23:27:30 (1114614): wrapper: running run_atlas (--nthreads 12)
[2025-06-02 23:27:30] Arguments: --nthreads 12
[2025-06-02 23:27:30] Threads: 12
[2025-06-02 23:27:30] Checking for CVMFS
[2025-06-02 23:27:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 23:27:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 23:27:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 23:27:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 23:27:32] 2.11.5.0 1039557 21832 234976 146731 1 816 42928200 45568001 19186 130560 0 195660777 99.843 106758179 24078 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-02 23:27:32] CVMFS is ok
[2025-06-02 23:27:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 23:27:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 23:27:32] Further information can be found at the LHC@home message board.
[2025-06-02 23:27:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 23:27:32] Checking for apptainer binary...
[2025-06-02 23:27:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 23:27:32] Running /usr/bin/apptainer --version
[2025-06-02 23:27:32] apptainer version 1.4.0-1.el9
[2025-06-02 23:27:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 23:27:32] wns0098.triumf.lcg
[2025-06-02 23:27:32] apptainer works
[2025-06-02 23:27:32] Set ATHENA_PROC_NUMBER=12
[2025-06-02 23:27:32] Set ATHENA_CORE_NUMBER=12
[2025-06-02 23:27:32] Starting ATLAS job with PandaID=6677469356
[2025-06-02 23:27:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 23:33:13]  *** The last 200 lines of the pilot log: ***
[2025-06-02 23:33:13] 2025-06-03 06:33:00,886 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-02 23:33:13] 2025-06-03 06:33:00,886 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677469356/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 23:33:13] 2025-06-03 06:33:00,887 | INFO     | extracted standard info from prmon json
[2025-06-02 23:33:13] 2025-06-03 06:33:00,887 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 23:33:13] 2025-06-03 06:33:00,887 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 23:33:13] 2025-06-03 06:33:00,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 23:33:13] 2025-06-03 06:33:00,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 23:33:13] 2025-06-03 06:33:00,888 | WARNING  | wrong length of table data, x=[1748932185.0], y=[3886.0] (must be same and length>=4)
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | ..............................
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . Timing measurements:
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . get job = 0 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . initial setup = 3 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . payload setup = 29 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . stage-in = 0 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . payload execution = 75 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . stage-out = 0 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . log creation = 0 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,896 | INFO     | ..............................
[2025-06-02 23:33:13] 2025-06-03 06:33:00,896 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 23:33:13] 2025-06-03 06:33:00,896 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677469356/pilotlog.txt
[2025-06-02 23:33:13] 2025-06-03 06:33:00,921 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-02 23:33:13] - Log from pilotlog.txt -
[2025-06-02 23:33:13] 2025-06-03 06:33:00,886 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-02 23:33:13] 2025-06-03 06:33:00,886 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677469356/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 23:33:13] 2025-06-03 06:33:00,887 | INFO     | extracted standard info from prmon json
[2025-06-02 23:33:13] 2025-06-03 06:33:00,887 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 23:33:13] 2025-06-03 06:33:00,887 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 23:33:13] 2025-06-03 06:33:00,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 23:33:13] 2025-06-03 06:33:00,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 23:33:13] 2025-06-03 06:33:00,888 | WARNING  | wrong length of table data, x=[1748932185.0], y=[3886.0] (must be same and length>=4)
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | ..............................
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . Timing measurements:
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . get job = 0 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . initial setup = 3 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . payload setup = 29 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . stage-in = 0 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . payload execution = 75 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . stage-out = 0 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . log creation = 0 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,896 | INFO     | ..............................
[2025-06-02 23:33:13] 2025-06-03 06:33:00,896 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 23:33:13] 2025-06-03 06:33:00,896 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677469356/pilotlog.txt
[2025-06-02 23:33:13] 2025-06-03 06:33:00,921 | WARNING  | 
[2025-06-02 23:33:13] [begin log extracts]
[2025-06-02 23:33:13] - Log from pilotlog.txt -
[2025-06-02 23:33:13] 2025-06-03 06:33:00,886 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-02 23:33:13] 2025-06-03 06:33:00,886 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677469356/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 23:33:13] 2025-06-03 06:33:00,887 | INFO     | extracted standard info from prmon json
[2025-06-02 23:33:13] 2025-06-03 06:33:00,887 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 23:33:13] 2025-06-03 06:33:00,887 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 23:33:13] 2025-06-03 06:33:00,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 23:33:13] 2025-06-03 06:33:00,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 23:33:13] 2025-06-03 06:33:00,888 | WARNING  | wrong length of table data, x=[1748932185.0], y=[3886.0] (must be same and length>=4)
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | ..............................
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . Timing measurements:
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . get job = 0 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . initial setup = 3 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . payload setup = 29 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . stage-in = 0 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . payload execution = 75 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . stage-out = 0 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,895 | INFO     | . log creation = 0 s
[2025-06-02 23:33:13] 2025-06-03 06:33:00,896 | INFO     | ..............................
[2025-06-02 23:33:13] 2025-06-03 06:33:00,896 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 23:33:13] 2025-06-03 06:33:00,896 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677469356/pilotlog.txt
[2025-06-02 23:33:13] [end log extracts]
[2025-06-02 23:33:13] 2025-06-03 06:33:00,921 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-02 23:33:13] 2025-06-03 06:33:00,922 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-02 23:33:13] 2025-06-03 06:33:01,142 | INFO     | 
[2025-06-02 23:33:13] 2025-06-03 06:33:01,142 | INFO     | job summary report
[2025-06-02 23:33:13] 2025-06-03 06:33:01,142 | INFO     | --------------------------------------------------
[2025-06-02 23:33:13] 2025-06-03 06:33:01,142 | INFO     | PanDA job id: 6677469356
[2025-06-02 23:33:13] 2025-06-03 06:33:01,142 | INFO     | task id: 45006595
[2025-06-02 23:33:13] 2025-06-03 06:33:01,143 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-02 23:30:31,883 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-02 23:33:13] 2025-06-03 06:33:01,143 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 23:33:13] 2025-06-03 06:33:01,143 | INFO     | pilot state: failed 
[2025-06-02 23:33:13] 2025-06-03 06:33:01,143 | INFO     | transexitcode: 65
[2025-06-02 23:33:13] 2025-06-03 06:33:01,143 | INFO     | exeerrorcode: 65
[2025-06-02 23:33:13] 2025-06-03 06:33:01,143 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 23:33:13] 2025-06-03 06:33:01,143 | INFO     | exitcode: 65
[2025-06-02 23:33:13] 2025-06-03 06:33:01,143 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 23:33:13] 2025-06-03 06:33:01,143 | INFO     | cpuconsumptiontime: 22 s
[2025-06-02 23:33:13] 2025-06-03 06:33:01,143 | INFO     | nevents: 0
[2025-06-02 23:33:13] 2025-06-03 06:33:01,143 | INFO     | neventsw: 0
[2025-06-02 23:33:13] 2025-06-03 06:33:01,143 | INFO     | pid: 1143168
[2025-06-02 23:33:13] 2025-06-03 06:33:01,143 | INFO     | pgrp: 1143168
[2025-06-02 23:33:13] 2025-06-03 06:33:01,143 | INFO     | corecount: 12
[2025-06-02 23:33:13] 2025-06-03 06:33:01,143 | INFO     | event service: False
[2025-06-02 23:33:13] 2025-06-03 06:33:01,143 | INFO     | sizes: {0: 2404950, 1: 2405205, 2: 2405205, 13: 2405233, 23: 2405495, 24: 2405523, 110: 2428910, 111: 2428886, 113: 2433149, 115: 2433177, 249: 2433319}
[2025-06-02 23:33:13] 2025-06-03 06:33:01,143 | INFO     | --------------------------------------------------
[2025-06-02 23:33:13] 2025-06-03 06:33:01,144 | INFO     | 
[2025-06-02 23:33:13] 2025-06-03 06:33:01,144 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-02 23:33:13] 2025-06-03 06:33:01,221 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 23:33:13] 2025-06-03 06:33:01,222 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 23:33:13] 2025-06-03 06:33:01,222 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 23:33:13] 2025-06-03 06:33:01,222 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 23:33:13] 2025-06-03 06:33:01,222 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 23:33:13] 2025-06-03 06:33:01,222 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 23:33:13] 2025-06-03 06:33:01,222 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 23:33:13] 2025-06-03 06:33:01,222 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 23:33:13] 2025-06-03 06:33:01,222 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 23:33:13] 2025-06-03 06:33:01,222 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 23:33:13] 2025-06-03 06:33:01,222 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 23:33:13] 2025-06-03 06:33:01,223 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 23:33:13] 2025-06-03 06:33:01,223 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 23:33:13] 2025-06-03 06:33:01,223 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 23:33:13] 2025-06-03 06:33:01,223 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 23:33:13] 2025-06-03 06:33:01,223 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 23:33:13] 2025-06-03 06:33:01,223 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 23:33:13] 2025-06-03 06:33:01,223 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 23:33:13] 2025-06-03 06:33:01,223 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 23:33:13] 2025-06-03 06:33:01,223 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 23:33:13] 2025-06-03 06:33:01,223 | INFO     | job 6677469356 has completed (purged errors)
[2025-06-02 23:33:13] 2025-06-03 06:33:01,223 | INFO     | overall cleanup function is called
[2025-06-02 23:33:13] 2025-06-03 06:33:02,230 | INFO     | --- collectZombieJob: --- 10, [1143168]
[2025-06-02 23:33:13] 2025-06-03 06:33:02,230 | INFO     | zombie collector waiting for pid 1143168
[2025-06-02 23:33:13] 2025-06-03 06:33:02,230 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 23:33:13] 2025-06-03 06:33:02,230 | INFO     | collected zombie processes
[2025-06-02 23:33:13] 2025-06-03 06:33:02,230 | INFO     | will attempt to kill all subprocesses of pid=1143168
[2025-06-02 23:33:13] 2025-06-03 06:33:02,996 | INFO     | process IDs to be killed: [1143168] (in reverse order)
[2025-06-02 23:33:13] 2025-06-03 06:33:03,218 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 23:33:13] 2025-06-03 06:33:03,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 23:33:13] 2025-06-03 06:33:03,251 | INFO     | did not find any defunct processes belonging to 1143168
[2025-06-02 23:33:13] 2025-06-03 06:33:03,285 | INFO     | did not find any defunct processes belonging to 1143168
[2025-06-02 23:33:13] 2025-06-03 06:33:03,286 | INFO     | ready for new job
[2025-06-02 23:33:13] 2025-06-03 06:33:03,286 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 23:33:13] 2025-06-03 06:33:03,287 | INFO     | **************************************
[2025-06-02 23:33:13] 2025-06-03 06:33:03,287 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 23:33:13] 2025-06-03 06:33:03,287 | INFO     | **************************************
[2025-06-02 23:33:13] 2025-06-03 06:33:03,287 | INFO     | 
[2025-06-02 23:33:13] 2025-06-03 06:33:03,290 | INFO     | architecture information:
[2025-06-02 23:33:13] 2025-06-03 06:33:03,297 | INFO     | executing command: cat /etc/os-release
[2025-06-02 23:33:13] 2025-06-03 06:33:03,378 | INFO     | cat /etc/os-release:
[2025-06-02 23:33:13] NAME="CentOS Linux"
[2025-06-02 23:33:13] VERSION="7 (Core)"
[2025-06-02 23:33:13] ID="centos"
[2025-06-02 23:33:13] ID_LIKE="rhel fedora"
[2025-06-02 23:33:13] VERSION_ID="7"
[2025-06-02 23:33:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 23:33:13] ANSI_COLOR="0;31"
[2025-06-02 23:33:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 23:33:13] HOME_URL="https://www.centos.org/"
[2025-06-02 23:33:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 23:33:13] 
[2025-06-02 23:33:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 23:33:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 23:33:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 23:33:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 23:33:13] 
[2025-06-02 23:33:13] 2025-06-03 06:33:03,378 | INFO     | **************************************
[2025-06-02 23:33:13] 2025-06-03 06:33:03,892 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-02 23:33:13] 2025-06-03 06:33:03,943 | INFO     | sufficient remaining disk space (2019723051008 B)
[2025-06-02 23:33:13] 2025-06-03 06:33:03,944 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 23:33:13] 2025-06-03 06:33:03,944 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 23:33:13] 2025-06-03 06:33:03,944 | INFO     | update_server=False
[2025-06-02 23:33:13] 2025-06-03 06:33:03,944 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 23:33:13] 2025-06-03 06:33:03,944 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 23:33:13] 2025-06-03 06:33:03,950 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 23:33:13] 2025-06-03 06:33:04,475 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 23:33:13] 2025-06-03 06:33:04,475 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 23:33:13] 2025-06-03 06:33:04,476 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 23:33:13] 2025-06-03 06:33:04,531 | INFO     | all payload control threads have been joined
[2025-06-02 23:33:13] 2025-06-03 06:33:04,710 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 23:33:13] 2025-06-03 06:33:04,711 | INFO     | aborting loop
[2025-06-02 23:33:13] 2025-06-03 06:33:04,905 | INFO     | all data control threads have been joined
[2025-06-02 23:33:13] 2025-06-03 06:33:04,950 | INFO     | [job] retrieve thread has finished
[2025-06-02 23:33:13] 2025-06-03 06:33:05,087 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 23:33:13] 2025-06-03 06:33:05,453 | INFO     | [payload] failed_post thread has finished
[2025-06-02 23:33:13] 2025-06-03 06:33:05,518 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 23:33:13] 2025-06-03 06:33:05,538 | INFO     | [payload] control thread has finished
[2025-06-02 23:33:13] 2025-06-03 06:33:05,614 | INFO     | all job control threads have been joined
[2025-06-02 23:33:13] 2025-06-03 06:33:05,693 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 23:33:13] 2025-06-03 06:33:05,717 | INFO     | [job] job monitor thread has finished
[2025-06-02 23:33:13] 2025-06-03 06:33:05,801 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 23:33:13] 2025-06-03 06:33:05,906 | INFO     | [data] copytool_in thread has finished
[2025-06-02 23:33:13] 2025-06-03 06:33:05,915 | INFO     | [data] control thread has finished
[2025-06-02 23:33:13] 2025-06-03 06:33:05,951 | INFO     | [data] copytool_out thread has finished
[2025-06-02 23:33:13] 2025-06-03 06:33:06,108 | INFO     | [job] validate thread has finished
[2025-06-02 23:33:13] 2025-06-03 06:33:06,161 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 23:33:13] 2025-06-03 06:33:06,307 | INFO     | [payload] validate_post thread has finished
[2025-06-02 23:33:13] 2025-06-03 06:33:06,620 | INFO     | [job] control thread has finished
[2025-06-02 23:33:13] 2025-06-03 06:33:07,167 | INFO     | [job] queue monitor thread has finished
[2025-06-02 23:33:13] 2025-06-03 06:33:07,963 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 23:33:13] 2025-06-03 06:33:07,996 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140705336338240)>', '<ExcThread(monitor, started 140704789550848)>']
[2025-06-02 23:33:13] 2025-06-03 06:33:08,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 23:33:13] 2025-06-03 06:33:08,503 | INFO     | [monitor] control thread has ended
[2025-06-02 23:33:13] 2025-06-03 06:33:13,022 | INFO     | all workflow threads have been joined
[2025-06-02 23:33:13] 2025-06-03 06:33:13,022 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 23:33:13] 2025-06-03 06:33:13,023 | INFO     | traces error code: 0
[2025-06-02 23:33:13] 2025-06-03 06:33:13,023 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 23:33:13] 2025-06-03 06:33:13,173 [wrapper] ==== pilot stdout END ====
[2025-06-02 23:33:13] 2025-06-03 06:33:13,176 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 23:33:13] 2025-06-03 06:33:13,178 [wrapper] pilotpid: 1123095
[2025-06-02 23:33:13] 2025-06-03 06:33:13,180 [wrapper] Pilot exit status: 0
[2025-06-02 23:33:13] 2025-06-03 06:33:13,199 [wrapper] pandaids: 6677469356
[2025-06-02 23:33:13] 2025-06-03 06:33:13,265 [wrapper] cleanup supervisor_pilot 1123111 1123096
[2025-06-02 23:33:13] 2025-06-03 06:33:13,267 [wrapper] Test setup, not cleaning
[2025-06-02 23:33:13] 2025-06-03 06:33:13,270 [wrapper] apfmon messages muted
[2025-06-02 23:33:13] 2025-06-03 06:33:13,272 [wrapper] ==== wrapper stdout END ====
[2025-06-02 23:33:13] 2025-06-03 06:33:13,275 [wrapper] ==== wrapper stderr END ====
[2025-06-02 23:33:13]  *** Error codes and diagnostics ***
[2025-06-02 23:33:13]     "exeErrorCode": 65,
[2025-06-02 23:33:13]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 23:33:13]     "pilotErrorCode": 1305,
[2025-06-02 23:33:13]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 23:33:13]  *** Listing of results directory ***
[2025-06-02 23:33:13] total 213648
[2025-06-02 23:33:13] -rw-r--r--. 1 boinc boinc    495897 Jun  2 21:53 pilot3.tar.gz
[2025-06-02 23:33:13] -rw-r--r--. 1 boinc boinc      5111 Jun  2 21:58 queuedata.json
[2025-06-02 23:33:13] -rwx------. 1 boinc boinc     37140 Jun  2 21:58 runpilot2-wrapper.sh
[2025-06-02 23:33:13] -rw-r--r--. 1 boinc boinc       100 Jun  2 23:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 23:33:13] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 23:27 run_atlas
[2025-06-02 23:33:13] -rw-r--r--. 1 boinc boinc       105 Jun  2 23:27 job.xml
[2025-06-02 23:33:13] -rw-r--r--. 1 boinc boinc      6596 Jun  2 23:27 init_data.xml
[2025-06-02 23:33:13] -rw-r--r--. 2 boinc boinc 214740233 Jun  2 23:27 EVNT.45006593._000803.pool.root.1
[2025-06-02 23:33:13] -rw-r--r--. 2 boinc boinc     15093 Jun  2 23:27 start_atlas.sh
[2025-06-02 23:33:13] drwxrwx--x. 2 boinc boinc      4096 Jun  2 23:27 shared
[2025-06-02 23:33:13] -rw-r--r--. 2 boinc boinc    508879 Jun  2 23:27 input.tar.gz
[2025-06-02 23:33:13] -rw-r--r--. 1 boinc boinc         0 Jun  2 23:27 boinc_lockfile
[2025-06-02 23:33:13] -rw-r--r--. 1 boinc boinc      2523 Jun  2 23:27 pandaJob.out
[2025-06-02 23:33:13] -rw-------. 1 boinc boinc    986901 Jun  2 23:28 agis_schedconf.cvmfs.json
[2025-06-02 23:33:13] -rw-------. 1 boinc boinc   1603667 Jun  2 23:28 agis_ddmendpoints.agis.ALL.json
[2025-06-02 23:33:13] drwx------. 4 boinc boinc      4096 Jun  2 23:28 pilot3
[2025-06-02 23:33:13] -rw-r--r--. 1 boinc boinc       524 Jun  2 23:30 boinc_task_state.xml
[2025-06-02 23:33:13] -rw-------. 1 boinc boinc       969 Jun  2 23:30 memory_monitor_summary.json
[2025-06-02 23:33:13] -rw-------. 1 boinc boinc     21782 Jun  2 23:30 log.45006595._020057.job.log.tgz.1
[2025-06-02 23:33:13] -rw-------. 1 boinc boinc        95 Jun  2 23:32 pilot_heartbeat.json
[2025-06-02 23:33:13] -rw-------. 1 boinc boinc      8330 Jun  2 23:33 heartbeat.json
[2025-06-02 23:33:13] -rw-r--r--. 1 boinc boinc      8192 Jun  2 23:33 boinc_mmap_file
[2025-06-02 23:33:13] -rw-r--r--. 1 boinc boinc        23 Jun  2 23:33 wrapper_checkpoint.txt
[2025-06-02 23:33:13] -rw-------. 1 boinc boinc      4352 Jun  2 23:33 pilotlog.txt
[2025-06-02 23:33:13] -rw-------. 1 boinc boinc     80789 Jun  2 23:33 log.45006595._020057.job.log.1
[2025-06-02 23:33:13] -rw-------. 1 boinc boinc       188 Jun  2 23:33 output.list
[2025-06-02 23:33:13] -rw-r--r--. 1 boinc boinc       620 Jun  2 23:33 runtime_log
[2025-06-02 23:33:13] -rw-------. 1 boinc boinc    122880 Jun  2 23:33 result.tar.gz
[2025-06-02 23:33:13] -rw-------. 1 boinc boinc       647 Jun  2 23:33 xT2KDmYuYg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmH3hKDmfYQeRo.diag
[2025-06-02 23:33:13] -rw-r--r--. 1 boinc boinc      8484 Jun  2 23:33 runtime_log.err
[2025-06-02 23:33:13] -rw-r--r--. 1 boinc boinc     21683 Jun  2 23:33 stderr.txt
[2025-06-02 23:33:13] No HITS result produced
[2025-06-02 23:33:13]  *** Contents of shared directory: ***
[2025-06-02 23:33:13] total 210344
[2025-06-02 23:33:13] -rw-r--r--. 2 boinc boinc 214740233 Jun  2 23:27 ATLAS.root_0
[2025-06-02 23:33:13] -rw-r--r--. 2 boinc boinc     15093 Jun  2 23:27 start_atlas.sh
[2025-06-02 23:33:13] -rw-r--r--. 2 boinc boinc    508879 Jun  2 23:27 input.tar.gz
[2025-06-02 23:33:13] -rw-------. 1 boinc boinc    122880 Jun  2 23:33 result.tar.gz
23:33:15 (1114614): run_atlas exited; CPU time 33.756859
23:33:15 (1114614): called boinc_finish(0)

</stderr_txt>
]]>

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