Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:08:34 (1639677): wrapper (7.7.26015): starting
15:08:34 (1639677): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 15:08:34] Arguments: --nthreads 4
[2025-06-04 15:08:34] Threads: 4
[2025-06-04 15:08:34] Checking for CVMFS
[2025-06-04 15:08:34] No cvmfs_config command found, will try listing directly
[2025-06-04 15:08:34] CVMFS is ok
[2025-06-04 15:08:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 15:08:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 15:08:34] Further information can be found at the LHC@home message board.
[2025-06-04 15:08:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:08:34] Checking for apptainer binary...
[2025-06-04 15:08:34] which: no apptainer in ((null))
[2025-06-04 15:08:35] apptainer is not installed, using version from CVMFS
[2025-06-04 15:08:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:08:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-06-04 15:08:35] apptainer works
[2025-06-04 15:08:35] Set ATHENA_PROC_NUMBER=4
[2025-06-04 15:08:35] Set ATHENA_CORE_NUMBER=4
[2025-06-04 15:08:35] Starting ATLAS job with PandaID=6677443865
[2025-06-04 15:08:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:09:22]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:09:22] 2025-06-04 15:08:53,296 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 17:09:22] 2025-06-04 15:08:53,297 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6677443865/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:09:22] 2025-06-04 15:08:53,297 | INFO     | extracted standard info from prmon json
[2025-06-04 17:09:22] 2025-06-04 15:08:53,297 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:09:22] 2025-06-04 15:08:53,297 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:09:22] 2025-06-04 15:08:53,298 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:09:22] 2025-06-04 15:08:53,298 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:09:22] 2025-06-04 15:08:53,301 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:09:22] 2025-06-04 15:08:53,302 | INFO     | sum of square deviations: 509440249.5
[2025-06-04 17:09:22] 2025-06-04 15:08:53,303 | INFO     | sum of deviations: 7420737626.500001
[2025-06-04 17:09:22] 2025-06-04 15:08:53,303 | INFO     | mean x: 1749046129.5
[2025-06-04 17:09:22] 2025-06-04 15:08:53,303 | INFO     | mean y: 2277807.2288135593
[2025-06-04 17:09:22] 2025-06-04 15:08:53,303 | INFO     | -- intersect: -25475121036.70537
[2025-06-04 17:09:22] 2025-06-04 15:08:53,303 | INFO     | intersect: -25475121036.70537
[2025-06-04 17:09:22] 2025-06-04 15:08:53,304 | INFO     | chi2: 2.0942617352335464
[2025-06-04 17:09:22] 2025-06-04 15:08:53,304 | INFO     | sum of square deviations: 447383272.0
[2025-06-04 17:09:22] 2025-06-04 15:08:53,305 | INFO     | sum of deviations: 13636063036.999998
[2025-06-04 17:09:22] 2025-06-04 15:08:53,305 | INFO     | mean x: 1749045977.0
[2025-06-04 17:09:22] 2025-06-04 15:08:53,305 | INFO     | mean y: 2292513.407079646
[2025-06-04 17:09:22] 2025-06-04 15:08:53,305 | INFO     | -- intersect: -53307928698.8497
[2025-06-04 17:09:22] 2025-06-04 15:08:53,305 | INFO     | intersect: -53307928698.8497
[2025-06-04 17:09:22] 2025-06-04 15:08:53,306 | INFO     | chi2: 1.4275180509125935
[2025-06-04 17:09:22] 2025-06-04 15:08:53,306 | INFO     | current chi2=1.4275180509125935 (change=31.836693241525488 %)
[2025-06-04 17:09:22] 2025-06-04 15:08:53,306 | INFO     | sum of square deviations: 390582207.0
[2025-06-04 17:09:22] 2025-06-04 15:08:53,307 | INFO     | sum of deviations: 13064171841.500002
[2025-06-04 17:09:22] 2025-06-04 15:08:53,307 | INFO     | mean x: 1749045824.5
[2025-06-04 17:09:22] 2025-06-04 15:08:53,307 | INFO     | mean y: 2290976.953703704
[2025-06-04 17:09:22] 2025-06-04 15:08:53,308 | INFO     | -- intersect: -58499696057.81681
[2025-06-04 17:09:22] 2025-06-04 15:08:53,308 | INFO     | intersect: -58499696057.81681
[2025-06-04 17:09:22] 2025-06-04 15:08:53,308 | INFO     | chi2: 1.4298655777421092
[2025-06-04 17:09:22] 2025-06-04 15:08:53,308 | INFO     | current chi2=1.4298655777421092 (change=-0.1644481362610388 %)
[2025-06-04 17:09:22] 2025-06-04 15:08:53,308 | INFO     | right removable region: 107
[2025-06-04 17:09:22] 2025-06-04 15:08:53,309 | INFO     | sum of square deviations: 447383272.0
[2025-06-04 17:09:22] 2025-06-04 15:08:53,310 | INFO     | sum of deviations: -7518111713.000001
[2025-06-04 17:09:22] 2025-06-04 15:08:53,310 | INFO     | mean x: 1749046282.0
[2025-06-04 17:09:22] 2025-06-04 15:08:53,310 | INFO     | mean y: 2313675.424778761
[2025-06-04 17:09:22] 2025-06-04 15:08:53,310 | INFO     | -- intersect: 29394394609.74121
[2025-06-04 17:09:22] 2025-06-04 15:08:53,310 | INFO     | intersect: 29394394609.74121
[2025-06-04 17:09:22] 2025-06-04 15:08:53,310 | INFO     | chi2: 0.6972745822447134
[2025-06-04 17:09:22] 2025-06-04 15:08:53,311 | INFO     | current chi2=0.6972745822447134 (change=66.70547092973766 %)
[2025-06-04 17:09:22] 2025-06-04 15:08:53,311 | INFO     | sum of square deviations: 390582207.0
[2025-06-04 17:09:22] 2025-06-04 15:08:53,312 | INFO     | sum of deviations: -6650984116.5
[2025-06-04 17:09:22] 2025-06-04 15:08:53,312 | INFO     | mean x: 1749046434.5
[2025-06-04 17:09:22] 2025-06-04 15:08:53,312 | INFO     | mean y: 2311368.157407407
[2025-06-04 17:09:22] 2025-06-04 15:08:53,312 | INFO     | -- intersect: 29785747086.416985
[2025-06-04 17:09:22] 2025-06-04 15:08:53,313 | INFO     | intersect: 29785747086.416985
[2025-06-04 17:09:22] 2025-06-04 15:08:53,313 | INFO     | chi2: 0.6969269671456207
[2025-06-04 17:09:22] 2025-06-04 15:08:53,313 | INFO     | current chi2=0.6969269671456207 (change=0.049853401793821354 %)
[2025-06-04 17:09:22] 2025-06-04 15:08:53,313 | INFO     | left removable region: 20
[2025-06-04 17:09:22] 2025-06-04 15:08:53,314 | INFO     | sum of square deviations: 204163828.0
[2025-06-04 17:09:22] 2025-06-04 15:08:53,314 | INFO     | sum of deviations: -118603153.99999999
[2025-06-04 17:09:22] 2025-06-04 15:08:53,314 | INFO     | mean x: 1749046404.0
[2025-06-04 17:09:22] 2025-06-04 15:08:53,314 | INFO     | mean y: 2328575.264367816
[2025-06-04 17:09:22] 2025-06-04 15:08:53,315 | INFO     | -- intersect: 1018387208.3673785
[2025-06-04 17:09:22] 2025-06-04 15:08:53,315 | INFO     | intersect: 1018387208.3673785
[2025-06-04 17:09:22] 2025-06-04 15:08:53,315 | INFO     | chi2: 0.00012388454621200477
[2025-06-04 17:09:22] 2025-06-04 15:08:53,315 | INFO     | -- intersect: 1018387208.3673785
[2025-06-04 17:09:22] 2025-06-04 15:08:53,315 | INFO     | current memory leak: -0.58 B/s (using 87 data points, chi2=0.00)
[2025-06-04 17:09:22] 2025-06-04 15:08:53,316 | INFO     | ..............................
[2025-06-04 17:09:22] 2025-06-04 15:08:53,316 | INFO     | . Timing measurements:
[2025-06-04 17:09:22] 2025-06-04 15:08:53,316 | INFO     | . get job = 0 s
[2025-06-04 17:09:22] 2025-06-04 15:08:53,317 | INFO     | . initial setup = 1 s
[2025-06-04 17:09:22] 2025-06-04 15:08:53,317 | INFO     | . payload setup = 9 s
[2025-06-04 17:09:22] 2025-06-04 15:08:53,317 | INFO     | . stage-in = 0 s
[2025-06-04 17:09:22] 2025-06-04 15:08:53,317 | INFO     | . payload execution = 7163 s
[2025-06-04 17:09:22] 2025-06-04 15:08:53,317 | INFO     | . stage-out = 0 s
[2025-06-04 17:09:22] 2025-06-04 15:08:53,317 | INFO     | . log creation = 0 s
[2025-06-04 17:09:22] 2025-06-04 15:08:53,317 | INFO     | ..............................
[2025-06-04 17:09:22] 2025-06-04 15:08:53,416 | INFO     | 
[2025-06-04 17:09:22] 2025-06-04 15:08:53,417 | INFO     | job summary report
[2025-06-04 17:09:22] 2025-06-04 15:08:53,417 | INFO     | --------------------------------------------------
[2025-06-04 17:09:22] 2025-06-04 15:08:53,417 | INFO     | PanDA job id: 6677443865
[2025-06-04 17:09:22] 2025-06-04 15:08:53,417 | INFO     | task id: 45006595
[2025-06-04 17:09:22] 2025-06-04 15:08:53,417 | INFO     | errors: (none)
[2025-06-04 17:09:22] 2025-06-04 15:08:53,417 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:09:22] 2025-06-04 15:08:53,417 | INFO     | pilot state: finished 
[2025-06-04 17:09:22] 2025-06-04 15:08:53,417 | INFO     | transexitcode: 0
[2025-06-04 17:09:22] 2025-06-04 15:08:53,418 | INFO     | exeerrorcode: 0
[2025-06-04 17:09:22] 2025-06-04 15:08:53,418 | INFO     | exeerrordiag: 
[2025-06-04 17:09:22] 2025-06-04 15:08:53,418 | INFO     | exitcode: 0
[2025-06-04 17:09:22] 2025-06-04 15:08:53,418 | INFO     | exitmsg: OK
[2025-06-04 17:09:22] 2025-06-04 15:08:53,418 | INFO     | cpuconsumptiontime: 27668 s
[2025-06-04 17:09:22] 2025-06-04 15:08:53,418 | INFO     | nevents: 400
[2025-06-04 17:09:22] 2025-06-04 15:08:53,418 | INFO     | neventsw: 0
[2025-06-04 17:09:22] 2025-06-04 15:08:53,418 | INFO     | pid: 1652007
[2025-06-04 17:09:22] 2025-06-04 15:08:53,418 | INFO     | pgrp: 1652007
[2025-06-04 17:09:22] 2025-06-04 15:08:53,418 | INFO     | corecount: 4
[2025-06-04 17:09:22] 2025-06-04 15:08:53,418 | INFO     | event service: False
[2025-06-04 17:09:22] 2025-06-04 15:08:53,418 | INFO     | sizes: {0: 2397352, 1: 2397380, 7: 2397586, 11: 2397614, 7177: 2424836, 7178: 2433801, 7179: 2433985, 7189: 2434155}
[2025-06-04 17:09:22] 2025-06-04 15:08:53,418 | INFO     | --------------------------------------------------
[2025-06-04 17:09:22] 2025-06-04 15:08:53,418 | INFO     | 
[2025-06-04 17:09:22] 2025-06-04 15:08:53,419 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-06-04 17:09:22] 2025-06-04 15:08:53,446 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:09:22] 2025-06-04 15:08:53,447 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:09:22] 2025-06-04 15:08:53,447 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:09:22] 2025-06-04 15:08:53,447 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:09:22] 2025-06-04 15:08:53,447 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:09:22] 2025-06-04 15:08:53,447 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:09:22] 2025-06-04 15:08:53,447 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:09:22] 2025-06-04 15:08:53,447 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:09:22] 2025-06-04 15:08:53,447 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:09:22] 2025-06-04 15:08:53,447 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:09:22] 2025-06-04 15:08:53,447 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:09:22] 2025-06-04 15:08:53,447 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:09:22] 2025-06-04 15:08:53,447 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:09:22] 2025-06-04 15:08:53,447 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:09:22] 2025-06-04 15:08:53,448 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:09:22] 2025-06-04 15:08:53,448 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:09:22] 2025-06-04 15:08:53,448 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:09:22] 2025-06-04 15:08:53,448 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:09:22] 2025-06-04 15:08:53,448 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:09:22] 2025-06-04 15:08:53,448 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:09:22] 2025-06-04 15:08:53,448 | INFO     | job 6677443865 has completed (purged errors)
[2025-06-04 17:09:22] 2025-06-04 15:08:53,448 | INFO     | overall cleanup function is called
[2025-06-04 17:09:22] 2025-06-04 15:08:54,457 | INFO     | --- collectZombieJob: --- 10, [1652007]
[2025-06-04 17:09:22] 2025-06-04 15:08:54,457 | INFO     | zombie collector waiting for pid 1652007
[2025-06-04 17:09:22] 2025-06-04 15:08:54,457 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:09:22] 2025-06-04 15:08:54,457 | INFO     | collected zombie processes
[2025-06-04 17:09:22] 2025-06-04 15:08:54,457 | INFO     | will attempt to kill all subprocesses of pid=1652007
[2025-06-04 17:09:22] 2025-06-04 15:08:55,046 | INFO     | process IDs to be killed: [1652007] (in reverse order)
[2025-06-04 17:09:22] 2025-06-04 15:08:55,274 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:09:22] 2025-06-04 15:08:55,274 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:09:22] 2025-06-04 15:08:55,300 | INFO     | did not find any defunct processes belonging to 1652007
[2025-06-04 17:09:22] 2025-06-04 15:08:55,325 | INFO     | did not find any defunct processes belonging to 1652007
[2025-06-04 17:09:22] 2025-06-04 15:08:55,325 | INFO     | ready for new job
[2025-06-04 17:09:22] 2025-06-04 15:08:55,325 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:09:22] 2025-06-04 15:08:55,327 | INFO     | **************************************
[2025-06-04 17:09:22] 2025-06-04 15:08:55,327 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:09:22] 2025-06-04 15:08:55,327 | INFO     | **************************************
[2025-06-04 17:09:22] 2025-06-04 15:08:55,327 | INFO     | 
[2025-06-04 17:09:22] 2025-06-04 15:08:55,335 | INFO     | architecture information:
[2025-06-04 17:09:22] 2025-06-04 15:08:55,335 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:09:22] 2025-06-04 15:08:55,352 | INFO     | cat /etc/os-release:
[2025-06-04 17:09:22] NAME="CentOS Linux"
[2025-06-04 17:09:22] VERSION="7 (Core)"
[2025-06-04 17:09:22] ID="centos"
[2025-06-04 17:09:22] ID_LIKE="rhel fedora"
[2025-06-04 17:09:22] VERSION_ID="7"
[2025-06-04 17:09:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:09:22] ANSI_COLOR="0;31"
[2025-06-04 17:09:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:09:22] HOME_URL="https://www.centos.org/"
[2025-06-04 17:09:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:09:22] 
[2025-06-04 17:09:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:09:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:09:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:09:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:09:22] 
[2025-06-04 17:09:22] 2025-06-04 15:08:55,352 | INFO     | **************************************
[2025-06-04 17:09:22] 2025-06-04 15:08:55,855 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-06-04 17:09:22] 2025-06-04 15:08:55,878 | INFO     | sufficient remaining disk space (3215778119680 B)
[2025-06-04 17:09:22] 2025-06-04 15:08:55,878 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:09:22] 2025-06-04 15:08:55,878 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:09:22] 2025-06-04 15:08:55,878 | INFO     | update_server=False
[2025-06-04 17:09:22] 2025-06-04 15:08:55,878 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:09:22] 2025-06-04 15:08:55,879 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:09:22] 2025-06-04 15:08:55,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:09:22] 2025-06-04 15:08:55,880 | INFO     | aborting loop
[2025-06-04 17:09:22] 2025-06-04 15:08:56,009 | INFO     | all data control threads have been joined
[2025-06-04 17:09:22] 2025-06-04 15:08:56,244 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:09:22] 2025-06-04 15:08:56,244 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:09:22] 2025-06-04 15:08:56,244 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:09:22] 2025-06-04 15:08:56,363 | INFO     | all payload control threads have been joined
[2025-06-04 17:09:22] 2025-06-04 15:08:56,883 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:09:22] 2025-06-04 15:08:56,886 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:09:22] 2025-06-04 15:08:56,890 | INFO     | all job control threads have been joined
[2025-06-04 17:09:22] 2025-06-04 15:08:56,892 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:09:22] 2025-06-04 15:08:57,014 | INFO     | [data] control thread has finished
[2025-06-04 17:09:22] 2025-06-04 15:08:57,101 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:09:22] 2025-06-04 15:08:57,369 | INFO     | [payload] control thread has finished
[2025-06-04 17:09:22] 2025-06-04 15:08:57,373 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:09:22] 2025-06-04 15:08:57,579 | INFO     | [job] validate thread has finished
[2025-06-04 17:09:22] 2025-06-04 15:08:57,885 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:09:22] 2025-06-04 15:08:57,895 | INFO     | [job] control thread has finished
[2025-06-04 17:09:22] 2025-06-04 15:08:58,147 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:09:22] 2025-06-04 15:08:58,229 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:09:22] 2025-06-04 15:08:58,254 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:09:22] 2025-06-04 15:08:58,342 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:09:22] 2025-06-04 15:08:58,427 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:09:22] 2025-06-04 15:08:59,043 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:09:22] 2025-06-04 15:08:59,432 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:09:22] 2025-06-04 15:09:03,049 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:09:22] 2025-06-04 15:09:04,805 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22909988738880)>', '<ExcThread(monitor, started 22909672187648)>']
[2025-06-04 17:09:22] 2025-06-04 15:09:05,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:09:22] 2025-06-04 15:09:05,298 | INFO     | [monitor] control thread has ended
[2025-06-04 17:09:22] 2025-06-04 15:09:09,830 | INFO     | all workflow threads have been joined
[2025-06-04 17:09:22] 2025-06-04 15:09:09,831 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:09:22] 2025-06-04 15:09:09,831 | INFO     | traces error code: 0
[2025-06-04 17:09:22] 2025-06-04 15:09:09,831 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:09:22] 2025-06-04 15:09:09,976 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:09:22] 2025-06-04 15:09:09,980 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:09:22] 2025-06-04 15:09:09,984 [wrapper] pilotpid: 1643934
[2025-06-04 17:09:22] 2025-06-04 15:09:09,989 [wrapper] Pilot exit status: 0
[2025-06-04 17:09:22] 2025-06-04 15:09:10,003 [wrapper] pandaids: 6677443865
[2025-06-04 17:09:22] 2025-06-04 15:09:10,149 [wrapper] cleanup supervisor_pilot 2125821 1643935
[2025-06-04 17:09:22] 2025-06-04 15:09:10,154 [wrapper] Test setup, not cleaning
[2025-06-04 17:09:22] 2025-06-04 15:09:10,158 [wrapper] apfmon messages muted
[2025-06-04 17:09:22] 2025-06-04 15:09:10,166 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:09:22] 2025-06-04 15:09:10,170 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:09:22]  *** Error codes and diagnostics ***
[2025-06-04 17:09:22]     "exeErrorCode": 0,
[2025-06-04 17:09:22]     "exeErrorDiag": "",
[2025-06-04 17:09:22]     "pilotErrorCode": 0,
[2025-06-04 17:09:22]     "pilotErrorDiag": "",
[2025-06-04 17:09:22]  *** Listing of results directory ***
[2025-06-04 17:09:22] total 389064
[2025-06-04 17:09:22] -rw-r--r-- 1 boinc boinc    495897 Jun  3 04:22 pilot3.tar.gz
[2025-06-04 17:09:22] -rw-r--r-- 1 boinc boinc      5111 Jun  3 04:26 queuedata.json
[2025-06-04 17:09:22] -rwx------ 1 boinc boinc     37140 Jun  3 04:26 runpilot2-wrapper.sh
[2025-06-04 17:09:22] -rw-r--r-- 1 boinc boinc       100 Jun  4 15:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:09:22] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 15:08 run_atlas
[2025-06-04 17:09:22] -rw-r--r-- 1 boinc boinc       105 Jun  4 15:08 job.xml
[2025-06-04 17:09:22] -rw-r--r-- 2 boinc boinc 216849653 Jun  4 15:08 EVNT.45006593._000692.pool.root.1
[2025-06-04 17:09:22] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:08 start_atlas.sh
[2025-06-04 17:09:22] drwxrwx--x 2 boinc boinc      4096 Jun  4 15:08 shared
[2025-06-04 17:09:22] -rw-r--r-- 2 boinc boinc    508877 Jun  4 15:08 input.tar.gz
[2025-06-04 17:09:22] -rw-r--r-- 1 boinc boinc      6686 Jun  4 15:08 init_data.xml
[2025-06-04 17:09:22] -rw-r--r-- 1 boinc boinc         0 Jun  4 15:08 boinc_lockfile
[2025-06-04 17:09:22] -rw-r--r-- 1 boinc boinc      2524 Jun  4 15:08 pandaJob.out
[2025-06-04 17:09:22] -rw------- 1 boinc boinc    986811 Jun  4 15:08 agis_schedconf.cvmfs.json
[2025-06-04 17:09:22] -rw------- 1 boinc boinc   1598969 Jun  4 15:08 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:09:22] drwx------ 4 boinc boinc      4096 Jun  4 15:08 pilot3
[2025-06-04 17:09:22] -rw------- 1 boinc boinc 175834265 Jun  4 17:08 HITS.45006595._017286.pool.root.1
[2025-06-04 17:09:22] -rw-r--r-- 1 boinc boinc       528 Jun  4 17:08 boinc_task_state.xml
[2025-06-04 17:09:22] -rw------- 1 boinc boinc      1030 Jun  4 17:08 memory_monitor_summary.json
[2025-06-04 17:09:22] -rw------- 1 boinc boinc        95 Jun  4 17:08 pilot_heartbeat.json
[2025-06-04 17:09:22] -rw------- 1 boinc boinc    261180 Jun  4 17:08 log.45006595._017286.job.log.tgz.1
[2025-06-04 17:09:22] -rw------- 1 boinc boinc      7711 Jun  4 17:08 heartbeat.json
[2025-06-04 17:09:22] -rw------- 1 boinc boinc      4365 Jun  4 17:09 pilotlog.txt
[2025-06-04 17:09:22] -rw------- 1 boinc boinc    682555 Jun  4 17:09 log.45006595._017286.job.log.1
[2025-06-04 17:09:22] -rw------- 1 boinc boinc       357 Jun  4 17:09 output.list
[2025-06-04 17:09:22] -rw-r--r-- 1 boinc boinc       620 Jun  4 17:09 runtime_log
[2025-06-04 17:09:22] -rw------- 1 boinc boinc    962560 Jun  4 17:09 result.tar.gz
[2025-06-04 17:09:22] -rw-r--r-- 1 boinc boinc      9040 Jun  4 17:09 runtime_log.err
[2025-06-04 17:09:22] -rw------- 1 boinc boinc       663 Jun  4 17:09 oFmNDmfXWg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZahKDmi1AmPo.diag
[2025-06-04 17:09:22] -rw-r--r-- 1 boinc boinc        26 Jun  4 17:09 wrapper_checkpoint.txt
[2025-06-04 17:09:22] -rw-r--r-- 1 boinc boinc      8192 Jun  4 17:09 boinc_mmap_file
[2025-06-04 17:09:22] -rw-r--r-- 1 boinc boinc     20610 Jun  4 17:09 stderr.txt
[2025-06-04 17:09:22] HITS file was successfully produced:
[2025-06-04 17:09:22] -rw------- 1 boinc boinc 175834265 Jun  4 17:08 shared/HITS.pool.root.1
[2025-06-04 17:09:22]  *** Contents of shared directory: ***
[2025-06-04 17:09:22] total 384948
[2025-06-04 17:09:22] -rw-r--r-- 2 boinc boinc 216849653 Jun  4 15:08 ATLAS.root_0
[2025-06-04 17:09:22] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:08 start_atlas.sh
[2025-06-04 17:09:22] -rw-r--r-- 2 boinc boinc    508877 Jun  4 15:08 input.tar.gz
[2025-06-04 17:09:22] -rw------- 1 boinc boinc 175834265 Jun  4 17:08 HITS.pool.root.1
[2025-06-04 17:09:22] -rw------- 1 boinc boinc    962560 Jun  4 17:09 result.tar.gz
17:09:24 (1639677): run_atlas exited; CPU time 28021.326568
17:09:24 (1639677): called boinc_finish(0)

</stderr_txt>
]]>

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