Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:03:09 (985274): wrapper (7.7.26015): starting
02:03:09 (985274): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 02:03:09] Arguments: --nthreads 8
[2025-06-03 02:03:09] Threads: 8
[2025-06-03 02:03:09] Checking for CVMFS
[2025-06-03 02:03:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 02:03:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 02:03:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 02:03:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 02:03:09] 2.12.6.0 3036893 21475 435452 146731 3 420 32684450 32935936 12866 16776704 0 105896019 99.636 95970271 24436 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 02:03:09] CVMFS is ok
[2025-06-03 02:03:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 02:03:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 02:03:09] Further information can be found at the LHC@home message board.
[2025-06-03 02:03:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 02:03:09] Checking for apptainer binary...
[2025-06-03 02:03:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 02:03:09] Running /usr/bin/apptainer --version
[2025-06-03 02:03:09] apptainer version 1.4.1-1.el9
[2025-06-03 02:03:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 02:03:09] c6-12-29-4.aglt2.org
[2025-06-03 02:03:09] apptainer works
[2025-06-03 02:03:09] Set ATHENA_PROC_NUMBER=8
[2025-06-03 02:03:09] Set ATHENA_CORE_NUMBER=8
[2025-06-03 02:03:09] Starting ATLAS job with PandaID=6677443941
[2025-06-03 02:03:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 03:41:25]  *** The last 200 lines of the pilot log: ***
[2025-06-03 03:41:25]  guid=972ebb00-b524-4582-bc77-4e3dc62ff36c
[2025-06-03 03:41:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 03:41:25]  is_altstaged=None
[2025-06-03 03:41:25]  is_tar=False
[2025-06-03 03:41:25]  lfn=log.45006595._017362.job.log.tgz.1
[2025-06-03 03:41:25]  mtime=0
[2025-06-03 03:41:25]  protocol_id=None
[2025-06-03 03:41:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 03:41:25]  replicas=None
[2025-06-03 03:41:25]  scope=mc23_13p6TeV
[2025-06-03 03:41:25]  status=None
[2025-06-03 03:41:25]  status_code=0
[2025-06-03 03:41:25]  storage_token=
[2025-06-03 03:41:25]  surl=/tmp/boinchome/slots/9/PanDA_Pilot-6677443941/log.45006595._017362.job.log.tgz.1
[2025-06-03 03:41:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/66/log.45006595._017362.job.log.tgz.1
[2025-06-03 03:41:25]  workdir=None
[2025-06-03 03:41:25] ]
[2025-06-03 03:41:25] 2025-06-03 07:40:55,949 | INFO     | transferring file log.45006595._017362.job.log.tgz.1 from /tmp/boinchome/slots/9/PanDA_Pilot-6677443941/log.45006595._017362.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 03:41:25] 2025-06-03 07:40:55,949 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/9/PanDA_Pilot-6677443941/log.45006595._017362.job.log.tgz.1 /tmp/boinchome/slots/9/log.45006595._017362.job
[2025-06-03 03:41:25] 2025-06-03 07:40:55,963 | INFO     | adding to output.list: log.45006595._017362.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/66/log.45006595._017362.job.log.tg
[2025-06-03 03:41:25] 2025-06-03 07:40:55,963 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 03:41:25] 2025-06-03 07:40:55,963 | INFO     | summary of transferred files:
[2025-06-03 03:41:25] 2025-06-03 07:40:55,964 | INFO     |  -- lfn=log.45006595._017362.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 03:41:25] 2025-06-03 07:40:55,964 | INFO     | stage-out finished correctly
[2025-06-03 03:41:25] 2025-06-03 07:40:59,476 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 03:41:25] 2025-06-03 07:40:59,804 | WARNING  | process 1018775 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 03:41:25] 2025-06-03 07:40:59,804 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6677443941/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 03:41:25] 2025-06-03 07:41:00,194 | INFO     | number of running child processes to parent process 1018775: 1
[2025-06-03 03:41:25] 2025-06-03 07:41:00,194 | INFO     | maximum number of monitored processes: 6
[2025-06-03 03:41:25] 2025-06-03 07:41:01,289 | INFO     | job 6677443941 has state=finished
[2025-06-03 03:41:25] 2025-06-03 07:41:01,289 | INFO     | preparing for final server update for job 6677443941 in state='finished'
[2025-06-03 03:41:25] 2025-06-03 07:41:01,290 | INFO     | this job has now completed (state=finished)
[2025-06-03 03:41:25] 2025-06-03 07:41:01,290 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 03:41:25] 2025-06-03 07:41:01,290 | INFO     | log transfer has been attempted: DONE
[2025-06-03 03:41:25] 2025-06-03 07:41:01,290 | INFO     | job 6677443941 has finished - writing final server update
[2025-06-03 03:41:25] 2025-06-03 07:41:01,291 | INFO     | total number of processed events: 400 (read)
[2025-06-03 03:41:25] 2025-06-03 07:41:01,308 | INFO     | executing command: lscpu
[2025-06-03 03:41:25] 2025-06-03 07:41:01,385 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 03:41:25] 2025-06-03 07:41:02,696 | INFO     | monitor loop #417: job 0:6677443941 is in state 'finished'
[2025-06-03 03:41:25] 2025-06-03 07:41:02,696 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 03:41:25] 2025-06-03 07:41:04,295 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 03:41:25] 2025-06-03 07:41:04,296 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6677443941/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 03:41:25] 2025-06-03 07:41:04,297 | INFO     | extracted standard info from prmon json
[2025-06-03 03:41:25] 2025-06-03 07:41:04,297 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 03:41:25] 2025-06-03 07:41:04,297 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 03:41:25] 2025-06-03 07:41:04,297 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 03:41:25] 2025-06-03 07:41:04,297 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 03:41:25] 2025-06-03 07:41:04,300 | INFO     | fitting pss+swap vs Time
[2025-06-03 03:41:25] 2025-06-03 07:41:04,300 | INFO     | sum of square deviations: 218571540.0
[2025-06-03 03:41:25] 2025-06-03 07:41:04,300 | INFO     | sum of deviations: 18464874154.999996
[2025-06-03 03:41:25] 2025-06-03 07:41:04,300 | INFO     | mean x: 1748933611.0
[2025-06-03 03:41:25] 2025-06-03 07:41:04,300 | INFO     | mean y: 2106574.4606741574
[2025-06-03 03:41:25] 2025-06-03 07:41:04,301 | INFO     | -- intersect: -147747408447.3245
[2025-06-03 03:41:25] 2025-06-03 07:41:04,301 | INFO     | intersect: -147747408447.3245
[2025-06-03 03:41:25] 2025-06-03 07:41:04,301 | INFO     | chi2: 1.0808960406620949
[2025-06-03 03:41:25] 2025-06-03 07:41:04,301 | INFO     | -- intersect: -147747408447.3245
[2025-06-03 03:41:25] 2025-06-03 07:41:04,301 | INFO     | current memory leak: 84.48 B/s (using 89 data points, chi2=1.08)
[2025-06-03 03:41:25] 2025-06-03 07:41:04,302 | INFO     | ..............................
[2025-06-03 03:41:25] 2025-06-03 07:41:04,302 | INFO     | . Timing measurements:
[2025-06-03 03:41:25] 2025-06-03 07:41:04,302 | INFO     | . get job = 0 s
[2025-06-03 03:41:25] 2025-06-03 07:41:04,302 | INFO     | . initial setup = 2 s
[2025-06-03 03:41:25] 2025-06-03 07:41:04,302 | INFO     | . payload setup = 5 s
[2025-06-03 03:41:25] 2025-06-03 07:41:04,302 | INFO     | . stage-in = 0 s
[2025-06-03 03:41:25] 2025-06-03 07:41:04,302 | INFO     | . payload execution = 5832 s
[2025-06-03 03:41:25] 2025-06-03 07:41:04,302 | INFO     | . stage-out = 0 s
[2025-06-03 03:41:25] 2025-06-03 07:41:04,302 | INFO     | . log creation = 0 s
[2025-06-03 03:41:25] 2025-06-03 07:41:04,302 | INFO     | ..............................
[2025-06-03 03:41:25] 2025-06-03 07:41:04,668 | INFO     | 
[2025-06-03 03:41:25] 2025-06-03 07:41:04,668 | INFO     | job summary report
[2025-06-03 03:41:25] 2025-06-03 07:41:04,668 | INFO     | --------------------------------------------------
[2025-06-03 03:41:25] 2025-06-03 07:41:04,668 | INFO     | PanDA job id: 6677443941
[2025-06-03 03:41:25] 2025-06-03 07:41:04,668 | INFO     | task id: 45006595
[2025-06-03 03:41:25] 2025-06-03 07:41:04,668 | INFO     | errors: (none)
[2025-06-03 03:41:25] 2025-06-03 07:41:04,668 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 03:41:25] 2025-06-03 07:41:04,668 | INFO     | pilot state: finished 
[2025-06-03 03:41:25] 2025-06-03 07:41:04,669 | INFO     | transexitcode: 0
[2025-06-03 03:41:25] 2025-06-03 07:41:04,669 | INFO     | exeerrorcode: 0
[2025-06-03 03:41:25] 2025-06-03 07:41:04,669 | INFO     | exeerrordiag: 
[2025-06-03 03:41:25] 2025-06-03 07:41:04,669 | INFO     | exitcode: 0
[2025-06-03 03:41:25] 2025-06-03 07:41:04,669 | INFO     | exitmsg: OK
[2025-06-03 03:41:25] 2025-06-03 07:41:04,669 | INFO     | cpuconsumptiontime: 37585 s
[2025-06-03 03:41:25] 2025-06-03 07:41:04,669 | INFO     | nevents: 400
[2025-06-03 03:41:25] 2025-06-03 07:41:04,669 | INFO     | neventsw: 0
[2025-06-03 03:41:25] 2025-06-03 07:41:04,669 | INFO     | pid: 1018775
[2025-06-03 03:41:25] 2025-06-03 07:41:04,669 | INFO     | pgrp: 1018775
[2025-06-03 03:41:25] 2025-06-03 07:41:04,669 | INFO     | corecount: 8
[2025-06-03 03:41:25] 2025-06-03 07:41:04,669 | INFO     | event service: False
[2025-06-03 03:41:25] 2025-06-03 07:41:04,670 | INFO     | sizes: {0: 2405182, 4: 2405388, 11: 2405416, 5841: 2432048, 5843: 2440989, 5847: 2441045, 5852: 2441343}
[2025-06-03 03:41:25] 2025-06-03 07:41:04,670 | INFO     | --------------------------------------------------
[2025-06-03 03:41:25] 2025-06-03 07:41:04,670 | INFO     | 
[2025-06-03 03:41:25] 2025-06-03 07:41:04,670 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-06-03 03:41:25] 2025-06-03 07:41:04,690 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 03:41:25] 2025-06-03 07:41:04,690 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 03:41:25] 2025-06-03 07:41:04,690 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 03:41:25] 2025-06-03 07:41:04,690 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 03:41:25] 2025-06-03 07:41:04,690 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 03:41:25] 2025-06-03 07:41:04,690 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 03:41:25] 2025-06-03 07:41:04,690 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 03:41:25] 2025-06-03 07:41:04,691 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 03:41:25] 2025-06-03 07:41:04,691 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 03:41:25] 2025-06-03 07:41:04,691 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 03:41:25] 2025-06-03 07:41:04,691 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 03:41:25] 2025-06-03 07:41:04,691 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 03:41:25] 2025-06-03 07:41:04,691 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 03:41:25] 2025-06-03 07:41:04,691 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 03:41:25] 2025-06-03 07:41:04,691 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 03:41:25] 2025-06-03 07:41:04,691 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 03:41:25] 2025-06-03 07:41:04,691 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 03:41:25] 2025-06-03 07:41:04,691 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 03:41:25] 2025-06-03 07:41:04,691 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 03:41:25] 2025-06-03 07:41:04,691 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 03:41:25] 2025-06-03 07:41:04,692 | INFO     | job 6677443941 has completed (purged errors)
[2025-06-03 03:41:25] 2025-06-03 07:41:04,692 | INFO     | overall cleanup function is called
[2025-06-03 03:41:25] 2025-06-03 07:41:05,700 | INFO     | --- collectZombieJob: --- 10, [1018775]
[2025-06-03 03:41:25] 2025-06-03 07:41:05,700 | INFO     | zombie collector waiting for pid 1018775
[2025-06-03 03:41:25] 2025-06-03 07:41:05,700 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 03:41:25] 2025-06-03 07:41:05,700 | INFO     | collected zombie processes
[2025-06-03 03:41:25] 2025-06-03 07:41:05,700 | INFO     | will attempt to kill all subprocesses of pid=1018775
[2025-06-03 03:41:25] 2025-06-03 07:41:06,056 | INFO     | process IDs to be killed: [1018775] (in reverse order)
[2025-06-03 03:41:25] 2025-06-03 07:41:06,156 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 03:41:25] 2025-06-03 07:41:06,156 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 03:41:25] 2025-06-03 07:41:06,169 | INFO     | did not find any defunct processes belonging to 1018775
[2025-06-03 03:41:25] 2025-06-03 07:41:06,182 | INFO     | did not find any defunct processes belonging to 1018775
[2025-06-03 03:41:25] 2025-06-03 07:41:06,182 | INFO     | ready for new job
[2025-06-03 03:41:25] 2025-06-03 07:41:06,182 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 03:41:25] 2025-06-03 07:41:06,184 | INFO     | **************************************
[2025-06-03 03:41:25] 2025-06-03 07:41:06,184 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 03:41:25] 2025-06-03 07:41:06,184 | INFO     | **************************************
[2025-06-03 03:41:25] 2025-06-03 07:41:06,184 | INFO     | 
[2025-06-03 03:41:25] 2025-06-03 07:41:06,202 | INFO     | architecture information:
[2025-06-03 03:41:25] 2025-06-03 07:41:06,203 | INFO     | executing command: cat /etc/os-release
[2025-06-03 03:41:25] 2025-06-03 07:41:06,220 | INFO     | cat /etc/os-release:
[2025-06-03 03:41:25] NAME="CentOS Linux"
[2025-06-03 03:41:25] VERSION="7 (Core)"
[2025-06-03 03:41:25] ID="centos"
[2025-06-03 03:41:25] ID_LIKE="rhel fedora"
[2025-06-03 03:41:25] VERSION_ID="7"
[2025-06-03 03:41:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 03:41:25] ANSI_COLOR="0;31"
[2025-06-03 03:41:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 03:41:25] HOME_URL="https://www.centos.org/"
[2025-06-03 03:41:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 03:41:25] 
[2025-06-03 03:41:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 03:41:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 03:41:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 03:41:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 03:41:25] 
[2025-06-03 03:41:25] 2025-06-03 07:41:06,220 | INFO     | **************************************
[2025-06-03 03:41:25] 2025-06-03 07:41:06,723 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-06-03 03:41:25] 2025-06-03 07:41:06,734 | INFO     | sufficient remaining disk space (90569703424 B)
[2025-06-03 03:41:25] 2025-06-03 07:41:06,735 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 03:41:25] 2025-06-03 07:41:06,735 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 03:41:25] 2025-06-03 07:41:06,735 | INFO     | update_server=False
[2025-06-03 03:41:25] 2025-06-03 07:41:06,735 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 03:41:25] 2025-06-03 07:41:06,735 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:41:25] 2025-06-03 07:41:06,736 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 03:41:25] 2025-06-03 07:41:06,736 | INFO     | aborting loop
[2025-06-03 03:41:25] 2025-06-03 07:41:06,886 | INFO     | all data control threads have been joined
[2025-06-03 03:41:25] 2025-06-03 07:41:07,231 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 03:41:25] 2025-06-03 07:41:07,231 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 03:41:25] 2025-06-03 07:41:07,231 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 03:41:25] 2025-06-03 07:41:07,546 | INFO     | all payload control threads have been joined
[2025-06-03 03:41:25] 2025-06-03 07:41:07,738 | INFO     | [job] job monitor thread has finished
[2025-06-03 03:41:25] 2025-06-03 07:41:07,740 | INFO     | [job] retrieve thread has finished
[2025-06-03 03:41:25] 2025-06-03 07:41:07,809 | INFO     | all job control threads have been joined
[2025-06-03 03:41:25] 2025-06-03 07:41:07,892 | INFO     | [data] control thread has finished
[2025-06-03 03:41:25] 2025-06-03 07:41:08,087 | INFO     | [data] copytool_in thread has finished
[2025-06-03 03:41:25] 2025-06-03 07:41:08,113 | INFO     | [payload] failed_post thread has finished
[2025-06-03 03:41:25] 2025-06-03 07:41:08,258 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 03:41:25] 2025-06-03 07:41:08,551 | INFO     | [payload] control thread has finished
[2025-06-03 03:41:25] 2025-06-03 07:41:08,741 | INFO     | [data] copytool_out thread has finished
[2025-06-03 03:41:25] 2025-06-03 07:41:08,783 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 03:41:25] 2025-06-03 07:41:08,813 | INFO     | [job] control thread has finished
[2025-06-03 03:41:25] 2025-06-03 07:41:08,975 | INFO     | [job] validate thread has finished
[2025-06-03 03:41:25] 2025-06-03 07:41:09,116 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 03:41:25] 2025-06-03 07:41:09,213 | INFO     | [payload] validate_post thread has finished
[2025-06-03 03:41:25] 2025-06-03 07:41:09,397 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:41:25] 2025-06-03 07:41:10,075 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 03:41:25] 2025-06-03 07:41:10,402 | INFO     | [job] queue monitor thread has finished
[2025-06-03 03:41:25] 2025-06-03 07:41:14,081 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 03:41:25] 2025-06-03 07:41:17,596 | INFO     | job.realtimelogging is not enabled
[2025-06-03 03:41:25] 2025-06-03 07:41:18,601 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 03:41:25] 2025-06-03 07:41:19,948 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140007106094912)>', '<ExcThread(monitor, started 140006538606336)>']
[2025-06-03 03:41:25] 2025-06-03 07:41:20,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 03:41:25] 2025-06-03 07:41:20,286 | INFO     | [monitor] control thread has ended
[2025-06-03 03:41:25] 2025-06-03 07:41:24,965 | INFO     | all workflow threads have been joined
[2025-06-03 03:41:25] 2025-06-03 07:41:24,965 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 03:41:25] 2025-06-03 07:41:24,965 | INFO     | traces error code: 0
[2025-06-03 03:41:25] 2025-06-03 07:41:24,966 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 03:41:25] 2025-06-03 07:41:25,117 [wrapper] ==== pilot stdout END ====
[2025-06-03 03:41:25] 2025-06-03 07:41:25,119 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 03:41:25] 2025-06-03 07:41:25,122 [wrapper] pilotpid: 995329
[2025-06-03 03:41:25] 2025-06-03 07:41:25,124 [wrapper] Pilot exit status: 0
[2025-06-03 03:41:25] 2025-06-03 07:41:25,133 [wrapper] pandaids: 6677443941
[2025-06-03 03:41:25] 2025-06-03 07:41:25,203 [wrapper] cleanup supervisor_pilot 1303743 995330
[2025-06-03 03:41:25] 2025-06-03 07:41:25,206 [wrapper] Test setup, not cleaning
[2025-06-03 03:41:25] 2025-06-03 07:41:25,209 [wrapper] apfmon messages muted
[2025-06-03 03:41:25] 2025-06-03 07:41:25,211 [wrapper] ==== wrapper stdout END ====
[2025-06-03 03:41:25] 2025-06-03 07:41:25,214 [wrapper] ==== wrapper stderr END ====
[2025-06-03 03:41:25]  *** Error codes and diagnostics ***
[2025-06-03 03:41:25]     "exeErrorCode": 0,
[2025-06-03 03:41:25]     "exeErrorDiag": "",
[2025-06-03 03:41:25]     "pilotErrorCode": 0,
[2025-06-03 03:41:25]     "pilotErrorDiag": "",
[2025-06-03 03:41:25]  *** Listing of results directory ***
[2025-06-03 03:41:25] total 392164
[2025-06-03 03:41:25] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 22:22 pilot3.tar.gz
[2025-06-03 03:41:25] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 22:30 queuedata.json
[2025-06-03 03:41:25] -rwx------. 1 boincer umatlas     37140 Jun  2 22:33 runpilot2-wrapper.sh
[2025-06-03 03:41:25] -rw-r--r--. 1 boincer umatlas       100 Jun  3 02:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 03:41:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 02:03 run_atlas
[2025-06-03 03:41:25] -rw-r--r--. 1 boincer umatlas       105 Jun  3 02:03 job.xml
[2025-06-03 03:41:25] -rw-r--r--. 2 boincer umatlas 214773270 Jun  3 02:03 EVNT.45006593._000695.pool.root.1
[2025-06-03 03:41:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 02:03 start_atlas.sh
[2025-06-03 03:41:25] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 02:03 shared
[2025-06-03 03:41:25] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 02:03 input.tar.gz
[2025-06-03 03:41:25] -rw-r--r--. 1 boincer umatlas         0 Jun  3 02:03 boinc_lockfile
[2025-06-03 03:41:25] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 02:03 pandaJob.out
[2025-06-03 03:41:25] -rw-------. 1 boincer umatlas    986901 Jun  3 02:03 agis_schedconf.cvmfs.json
[2025-06-03 03:41:25] -rw-------. 1 boincer umatlas   1603667 Jun  3 02:03 agis_ddmendpoints.agis.ALL.json
[2025-06-03 03:41:25] drwx------. 4 boincer umatlas      4096 Jun  3 02:03 pilot3
[2025-06-03 03:41:25] -rw-------. 1 boincer umatlas        95 Jun  3 03:40 pilot_heartbeat.json
[2025-06-03 03:41:25] -rw-------. 1 boincer umatlas 181225776 Jun  3 03:40 HITS.45006595._017362.pool.root.1
[2025-06-03 03:41:25] -rw-r--r--. 1 boincer umatlas       530 Jun  3 03:40 boinc_task_state.xml
[2025-06-03 03:41:25] -rw-r--r--. 1 boincer umatlas      6860 Jun  3 03:40 init_data.xml
[2025-06-03 03:41:25] -rw-------. 1 boincer umatlas      1037 Jun  3 03:40 memory_monitor_summary.json
[2025-06-03 03:41:25] -rw-------. 1 boincer umatlas    312682 Jun  3 03:40 log.45006595._017362.job.log.tgz.1
[2025-06-03 03:41:25] -rw-------. 1 boincer umatlas      7718 Jun  3 03:41 heartbeat.json
[2025-06-03 03:41:25] -rw-r--r--. 1 boincer umatlas        27 Jun  3 03:41 wrapper_checkpoint.txt
[2025-06-03 03:41:25] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 03:41 boinc_mmap_file
[2025-06-03 03:41:25] -rw-------. 1 boincer umatlas      4425 Jun  3 03:41 pilotlog.txt
[2025-06-03 03:41:25] -rw-------. 1 boincer umatlas    556935 Jun  3 03:41 log.45006595._017362.job.log.1
[2025-06-03 03:41:25] -rw-------. 1 boincer umatlas       357 Jun  3 03:41 output.list
[2025-06-03 03:41:25] -rw-r--r--. 1 boincer umatlas       620 Jun  3 03:41 runtime_log
[2025-06-03 03:41:25] -rw-------. 1 boincer umatlas    890880 Jun  3 03:41 result.tar.gz
[2025-06-03 03:41:25] -rw-r--r--. 1 boincer umatlas      8669 Jun  3 03:41 runtime_log.err
[2025-06-03 03:41:25] -rw-------. 1 boincer umatlas       654 Jun  3 03:41 IpxLDmhdWg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMbhKDmdkfsgm.diag
[2025-06-03 03:41:25] -rw-r--r--. 1 boincer umatlas     21292 Jun  3 03:41 stderr.txt
[2025-06-03 03:41:25] HITS file was successfully produced:
[2025-06-03 03:41:25] -rw-------. 1 boincer umatlas 181225776 Jun  3 03:40 shared/HITS.pool.root.1
[2025-06-03 03:41:25]  *** Contents of shared directory: ***
[2025-06-03 03:41:25] total 388116
[2025-06-03 03:41:25] -rw-r--r--. 2 boincer umatlas 214773270 Jun  3 02:03 ATLAS.root_0
[2025-06-03 03:41:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 02:03 start_atlas.sh
[2025-06-03 03:41:25] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 02:03 input.tar.gz
[2025-06-03 03:41:25] -rw-------. 1 boincer umatlas 181225776 Jun  3 03:40 HITS.pool.root.1
[2025-06-03 03:41:25] -rw-------. 1 boincer umatlas    890880 Jun  3 03:41 result.tar.gz
03:41:27 (985274): run_atlas exited; CPU time 37845.514135
03:41:27 (985274): called boinc_finish(0)

</stderr_txt>
]]>

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