Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:04:57 (15833): wrapper (7.7.26015): starting
02:04:57 (15833): wrapper: running run_atlas (--nthreads 10)
[2025-06-03 02:04:57] Arguments: --nthreads 10
[2025-06-03 02:04:57] Threads: 10
[2025-06-03 02:04:57] Checking for CVMFS
[2025-06-03 02:04:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 02:04:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 02:04:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 02:04:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 02:04:58] 2.11.2.0 13662 106868 211600 146731 1 505 18304474 18432001 3545 130560 0 485321555 99.081 986613974 35507 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 02:04:58] CVMFS is ok
[2025-06-03 02:04:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 02:04:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 02:04:58] Further information can be found at the LHC@home message board.
[2025-06-03 02:04:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 02:04:58] Checking for apptainer binary...
[2025-06-03 02:04:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 02:04:58] Running /usr/bin/apptainer --version
[2025-06-03 02:04:58] apptainer version 1.3.2-1.el7
[2025-06-03 02:04:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 02:04:58] c-210-25.aglt2.org
[2025-06-03 02:04:58] apptainer works
[2025-06-03 02:04:58] Set ATHENA_PROC_NUMBER=10
[2025-06-03 02:04:58] Set ATHENA_CORE_NUMBER=10
[2025-06-03 02:04:58] Starting ATLAS job with PandaID=6677440455
[2025-06-03 02:04:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 02:56:11]  *** The last 200 lines of the pilot log: ***
[2025-06-03 02:56:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/e6/log.45006595._015260.job.log.tgz.1
[2025-06-03 02:56:11]  workdir=None
[2025-06-03 02:56:11] ]
[2025-06-03 02:56:11] 2025-06-03 06:55:44,115 | INFO     | transferring file log.45006595._015260.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6677440455/log.45006595._015260.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 02:56:11] 2025-06-03 06:55:44,115 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6677440455/log.45006595._015260.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._015260.job
[2025-06-03 02:56:11] 2025-06-03 06:55:44,132 | INFO     | adding to output.list: log.45006595._015260.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/e6/log.45006595._015260.job.log.tg
[2025-06-03 02:56:11] 2025-06-03 06:55:44,133 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 02:56:11] 2025-06-03 06:55:44,133 | INFO     | summary of transferred files:
[2025-06-03 02:56:11] 2025-06-03 06:55:44,133 | INFO     |  -- lfn=log.45006595._015260.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 02:56:11] 2025-06-03 06:55:44,134 | INFO     | stage-out finished correctly
[2025-06-03 02:56:11] 2025-06-03 06:55:45,516 | WARNING  | process 26893 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 02:56:11] 2025-06-03 06:55:45,516 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677440455/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 02:56:11] 2025-06-03 06:55:45,517 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677440455/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 02:56:11] 2025-06-03 06:55:45,518 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3507679 B
[2025-06-03 02:56:11] 2025-06-03 06:55:45,518 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15682 B
[2025-06-03 02:56:11] 2025-06-03 06:55:45,518 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 02:56:11] 2025-06-03 06:55:45,529 | INFO     | sufficient remaining disk space (57057214464 B)
[2025-06-03 02:56:11] 2025-06-03 06:55:45,529 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-03 02:56:11] 2025-06-03 06:55:45,529 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6677440455: 3796274 B (within 2537553920 B limit)
[2025-06-03 02:56:11] 2025-06-03 06:55:45,530 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6677440455/HITS.45006595._015260.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-03 02:56:11] 2025-06-03 06:55:45,530 | INFO     | total size of present files: 0 B (workdir size: 3796274 B)
[2025-06-03 02:56:11] 2025-06-03 06:55:45,530 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6677440455/HITS.45006595._015260.pool.root.1 since it does not exist
[2025-06-03 02:56:11] 2025-06-03 06:55:45,649 | INFO     | number of running child processes to parent process 26893: 1
[2025-06-03 02:56:11] 2025-06-03 06:55:45,649 | INFO     | maximum number of monitored processes: 6
[2025-06-03 02:56:11] 2025-06-03 06:55:45,676 | INFO     | 3039s have passed since pilot start - server update state is 'RUNNING'
[2025-06-03 02:56:11] 2025-06-03 06:55:45,728 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 02:56:11] 2025-06-03 06:55:47,066 | INFO     | job 6677440455 has state=finished
[2025-06-03 02:56:11] 2025-06-03 06:55:47,067 | INFO     | preparing for final server update for job 6677440455 in state='finished'
[2025-06-03 02:56:11] 2025-06-03 06:55:47,067 | INFO     | this job has now completed (state=finished)
[2025-06-03 02:56:11] 2025-06-03 06:55:47,068 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 02:56:11] 2025-06-03 06:55:47,068 | INFO     | log transfer has been attempted: DONE
[2025-06-03 02:56:11] 2025-06-03 06:55:47,068 | INFO     | job 6677440455 has finished - writing final server update
[2025-06-03 02:56:11] 2025-06-03 06:55:47,068 | INFO     | total number of processed events: 400 (read)
[2025-06-03 02:56:11] 2025-06-03 06:55:47,071 | INFO     | executing command: lscpu
[2025-06-03 02:56:11] 2025-06-03 06:55:47,116 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 02:56:11] 2025-06-03 06:55:48,152 | INFO     | monitor loop #232: job 0:6677440455 is in state 'finished'
[2025-06-03 02:56:11] 2025-06-03 06:55:48,153 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 02:56:11] 2025-06-03 06:55:50,656 | INFO     | monitor loop #233: job 0:6677440455 is in state 'finished'
[2025-06-03 02:56:11] 2025-06-03 06:55:50,656 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 02:56:11] 2025-06-03 06:55:51,204 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 02:56:11] 2025-06-03 06:55:51,204 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677440455/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 02:56:11] 2025-06-03 06:55:51,205 | INFO     | extracted standard info from prmon json
[2025-06-03 02:56:11] 2025-06-03 06:55:51,205 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 02:56:11] 2025-06-03 06:55:51,205 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 02:56:11] 2025-06-03 06:55:51,206 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 02:56:11] 2025-06-03 06:55:51,206 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 02:56:11] 2025-06-03 06:55:51,207 | INFO     | fitting pss+swap vs Time
[2025-06-03 02:56:11] 2025-06-03 06:55:51,208 | INFO     | sum of square deviations: 24640462.0
[2025-06-03 02:56:11] 2025-06-03 06:55:51,208 | INFO     | sum of deviations: -1610640706.0
[2025-06-03 02:56:11] 2025-06-03 06:55:51,208 | INFO     | mean x: 1748932323.0
[2025-06-03 02:56:11] 2025-06-03 06:55:51,208 | INFO     | mean y: 2621891.488372093
[2025-06-03 02:56:11] 2025-06-03 06:55:51,208 | INFO     | -- intersect: 114322783236.79674
[2025-06-03 02:56:11] 2025-06-03 06:55:51,208 | INFO     | intersect: 114322783236.79674
[2025-06-03 02:56:11] 2025-06-03 06:55:51,208 | INFO     | chi2: 0.009263276240431013
[2025-06-03 02:56:11] 2025-06-03 06:55:51,209 | INFO     | -- intersect: 114322783236.79674
[2025-06-03 02:56:11] 2025-06-03 06:55:51,209 | INFO     | current memory leak: -65.37 B/s (using 43 data points, chi2=0.01)
[2025-06-03 02:56:11] 2025-06-03 06:55:51,209 | INFO     | ..............................
[2025-06-03 02:56:11] 2025-06-03 06:55:51,209 | INFO     | . Timing measurements:
[2025-06-03 02:56:11] 2025-06-03 06:55:51,209 | INFO     | . get job = 0 s
[2025-06-03 02:56:11] 2025-06-03 06:55:51,209 | INFO     | . initial setup = 2 s
[2025-06-03 02:56:11] 2025-06-03 06:55:51,209 | INFO     | . payload setup = 7 s
[2025-06-03 02:56:11] 2025-06-03 06:55:51,210 | INFO     | . stage-in = 0 s
[2025-06-03 02:56:11] 2025-06-03 06:55:51,210 | INFO     | . payload execution = 3008 s
[2025-06-03 02:56:11] 2025-06-03 06:55:51,210 | INFO     | . stage-out = 0 s
[2025-06-03 02:56:11] 2025-06-03 06:55:51,210 | INFO     | . log creation = 0 s
[2025-06-03 02:56:11] 2025-06-03 06:55:51,210 | INFO     | ..............................
[2025-06-03 02:56:11] 2025-06-03 06:55:51,472 | INFO     | 
[2025-06-03 02:56:11] 2025-06-03 06:55:51,472 | INFO     | job summary report
[2025-06-03 02:56:11] 2025-06-03 06:55:51,472 | INFO     | --------------------------------------------------
[2025-06-03 02:56:11] 2025-06-03 06:55:51,473 | INFO     | PanDA job id: 6677440455
[2025-06-03 02:56:11] 2025-06-03 06:55:51,473 | INFO     | task id: 45006595
[2025-06-03 02:56:11] 2025-06-03 06:55:51,473 | INFO     | errors: (none)
[2025-06-03 02:56:11] 2025-06-03 06:55:51,473 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 02:56:11] 2025-06-03 06:55:51,473 | INFO     | pilot state: finished 
[2025-06-03 02:56:11] 2025-06-03 06:55:51,473 | INFO     | transexitcode: 0
[2025-06-03 02:56:11] 2025-06-03 06:55:51,473 | INFO     | exeerrorcode: 0
[2025-06-03 02:56:11] 2025-06-03 06:55:51,473 | INFO     | exeerrordiag: 
[2025-06-03 02:56:11] 2025-06-03 06:55:51,474 | INFO     | exitcode: 0
[2025-06-03 02:56:11] 2025-06-03 06:55:51,474 | INFO     | exitmsg: OK
[2025-06-03 02:56:11] 2025-06-03 06:55:51,474 | INFO     | cpuconsumptiontime: 27187 s
[2025-06-03 02:56:11] 2025-06-03 06:55:51,474 | INFO     | nevents: 400
[2025-06-03 02:56:11] 2025-06-03 06:55:51,474 | INFO     | neventsw: 0
[2025-06-03 02:56:11] 2025-06-03 06:55:51,474 | INFO     | pid: 26893
[2025-06-03 02:56:11] 2025-06-03 06:55:51,474 | INFO     | pgrp: 26893
[2025-06-03 02:56:11] 2025-06-03 06:55:51,474 | INFO     | corecount: 10
[2025-06-03 02:56:11] 2025-06-03 06:55:51,475 | INFO     | event service: False
[2025-06-03 02:56:11] 2025-06-03 06:55:51,475 | INFO     | sizes: {0: 2405011, 1: 2405210, 5: 2405416, 11: 2405472, 3019: 2430706, 3020: 2439647, 3021: 2439859, 3027: 2440029}
[2025-06-03 02:56:11] 2025-06-03 06:55:51,475 | INFO     | --------------------------------------------------
[2025-06-03 02:56:11] 2025-06-03 06:55:51,475 | INFO     | 
[2025-06-03 02:56:11] 2025-06-03 06:55:51,475 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 02:56:11] 2025-06-03 06:55:51,498 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 02:56:11] 2025-06-03 06:55:51,498 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 02:56:11] 2025-06-03 06:55:51,499 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 02:56:11] 2025-06-03 06:55:51,499 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 02:56:11] 2025-06-03 06:55:51,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 02:56:11] 2025-06-03 06:55:51,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 02:56:11] 2025-06-03 06:55:51,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 02:56:11] 2025-06-03 06:55:51,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 02:56:11] 2025-06-03 06:55:51,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 02:56:11] 2025-06-03 06:55:51,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 02:56:11] 2025-06-03 06:55:51,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 02:56:11] 2025-06-03 06:55:51,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 02:56:11] 2025-06-03 06:55:51,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 02:56:11] 2025-06-03 06:55:51,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 02:56:11] 2025-06-03 06:55:51,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 02:56:11] 2025-06-03 06:55:51,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 02:56:11] 2025-06-03 06:55:51,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 02:56:11] 2025-06-03 06:55:51,500 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 02:56:11] 2025-06-03 06:55:51,501 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 02:56:11] 2025-06-03 06:55:51,501 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 02:56:11] 2025-06-03 06:55:51,501 | INFO     | job 6677440455 has completed (purged errors)
[2025-06-03 02:56:11] 2025-06-03 06:55:51,501 | INFO     | overall cleanup function is called
[2025-06-03 02:56:11] 2025-06-03 06:55:52,509 | INFO     | --- collectZombieJob: --- 10, [26893]
[2025-06-03 02:56:11] 2025-06-03 06:55:52,509 | INFO     | zombie collector waiting for pid 26893
[2025-06-03 02:56:11] 2025-06-03 06:55:52,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 02:56:11] 2025-06-03 06:55:52,510 | INFO     | collected zombie processes
[2025-06-03 02:56:11] 2025-06-03 06:55:52,510 | INFO     | will attempt to kill all subprocesses of pid=26893
[2025-06-03 02:56:11] 2025-06-03 06:55:52,659 | INFO     | process IDs to be killed: [26893] (in reverse order)
[2025-06-03 02:56:11] 2025-06-03 06:55:52,734 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 02:56:11] 2025-06-03 06:55:52,735 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 02:56:11] 2025-06-03 06:55:52,738 | INFO     | did not find any defunct processes belonging to 26893
[2025-06-03 02:56:11] 2025-06-03 06:55:52,741 | INFO     | did not find any defunct processes belonging to 26893
[2025-06-03 02:56:11] 2025-06-03 06:55:52,741 | INFO     | ready for new job
[2025-06-03 02:56:11] 2025-06-03 06:55:52,741 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 02:56:11] 2025-06-03 06:55:52,742 | INFO     | **************************************
[2025-06-03 02:56:11] 2025-06-03 06:55:52,742 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 02:56:11] 2025-06-03 06:55:52,742 | INFO     | **************************************
[2025-06-03 02:56:11] 2025-06-03 06:55:52,742 | INFO     | 
[2025-06-03 02:56:11] 2025-06-03 06:55:52,743 | INFO     | architecture information:
[2025-06-03 02:56:11] 2025-06-03 06:55:52,744 | INFO     | executing command: cat /etc/os-release
[2025-06-03 02:56:11] 2025-06-03 06:55:52,756 | INFO     | cat /etc/os-release:
[2025-06-03 02:56:11] NAME="CentOS Linux"
[2025-06-03 02:56:11] VERSION="7 (Core)"
[2025-06-03 02:56:11] ID="centos"
[2025-06-03 02:56:11] ID_LIKE="rhel fedora"
[2025-06-03 02:56:11] VERSION_ID="7"
[2025-06-03 02:56:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 02:56:11] ANSI_COLOR="0;31"
[2025-06-03 02:56:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 02:56:11] HOME_URL="https://www.centos.org/"
[2025-06-03 02:56:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 02:56:11] 
[2025-06-03 02:56:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 02:56:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 02:56:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 02:56:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 02:56:11] 
[2025-06-03 02:56:11] 2025-06-03 06:55:52,756 | INFO     | **************************************
[2025-06-03 02:56:11] 2025-06-03 06:55:53,259 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 02:56:11] 2025-06-03 06:55:53,283 | INFO     | sufficient remaining disk space (57060360192 B)
[2025-06-03 02:56:11] 2025-06-03 06:55:53,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 02:56:11] 2025-06-03 06:55:53,284 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 02:56:11] 2025-06-03 06:55:53,284 | INFO     | update_server=False
[2025-06-03 02:56:11] 2025-06-03 06:55:53,284 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 02:56:11] 2025-06-03 06:55:53,284 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 02:56:11] 2025-06-03 06:55:53,285 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:56:11] 2025-06-03 06:55:53,285 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 02:56:11] 2025-06-03 06:55:53,285 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 02:56:11] 2025-06-03 06:55:53,285 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 02:56:11] 2025-06-03 06:55:53,545 | INFO     | all data control threads have been joined
[2025-06-03 02:56:11] 2025-06-03 06:55:53,736 | INFO     | all payload control threads have been joined
[2025-06-03 02:56:11] 2025-06-03 06:55:53,748 | INFO     | all job control threads have been joined
[2025-06-03 02:56:11] 2025-06-03 06:55:54,162 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:56:11] 2025-06-03 06:55:54,162 | INFO     | aborting loop
[2025-06-03 02:56:11] 2025-06-03 06:55:54,286 | INFO     | [job] retrieve thread has finished
[2025-06-03 02:56:11] 2025-06-03 06:55:54,290 | INFO     | [job] queue monitor thread has finished
[2025-06-03 02:56:11] 2025-06-03 06:55:54,344 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 02:56:11] 2025-06-03 06:55:54,550 | INFO     | [data] control thread has finished
[2025-06-03 02:56:11] 2025-06-03 06:55:54,724 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 02:56:11] 2025-06-03 06:55:54,738 | INFO     | [payload] control thread has finished
[2025-06-03 02:56:11] 2025-06-03 06:55:54,751 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 02:56:11] 2025-06-03 06:55:54,753 | INFO     | [job] control thread has finished
[2025-06-03 02:56:11] 2025-06-03 06:55:54,967 | INFO     | [payload] failed_post thread has finished
[2025-06-03 02:56:11] 2025-06-03 06:55:55,167 | INFO     | [job] job monitor thread has finished
[2025-06-03 02:56:11] 2025-06-03 06:55:55,269 | INFO     | [data] copytool_in thread has finished
[2025-06-03 02:56:11] 2025-06-03 06:55:55,483 | INFO     | [job] validate thread has finished
[2025-06-03 02:56:11] 2025-06-03 06:55:55,516 | INFO     | [payload] validate_post thread has finished
[2025-06-03 02:56:11] 2025-06-03 06:55:55,703 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 02:56:11] 2025-06-03 06:55:56,336 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 02:56:11] 2025-06-03 06:55:56,731 | INFO     | [data] copytool_out thread has finished
[2025-06-03 02:56:11] 2025-06-03 06:56:00,342 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 02:56:11] 2025-06-03 06:56:04,083 | INFO     | job.realtimelogging is not enabled
[2025-06-03 02:56:11] 2025-06-03 06:56:05,089 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 02:56:11] 2025-06-03 06:56:06,209 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139896087586624)>', '<ExcThread(monitor, started 139895523759872)>']
[2025-06-03 02:56:11] 2025-06-03 06:56:06,343 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 02:56:11] 2025-06-03 06:56:06,344 | INFO     | [monitor] control thread has ended
[2025-06-03 02:56:11] 2025-06-03 06:56:11,234 | INFO     | all workflow threads have been joined
[2025-06-03 02:56:11] 2025-06-03 06:56:11,234 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 02:56:11] 2025-06-03 06:56:11,235 | INFO     | traces error code: 0
[2025-06-03 02:56:11] 2025-06-03 06:56:11,235 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 02:56:11] 2025-06-03 06:56:11,335 [wrapper] ==== pilot stdout END ====
[2025-06-03 02:56:11] 2025-06-03 06:56:11,339 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 02:56:11] 2025-06-03 06:56:11,343 [wrapper] pilotpid: 20005
[2025-06-03 02:56:11] 2025-06-03 06:56:11,346 [wrapper] Pilot exit status: 0
[2025-06-03 02:56:11] 2025-06-03 06:56:11,359 [wrapper] pandaids: 6677440455
[2025-06-03 02:56:11] 2025-06-03 06:56:11,416 [wrapper] cleanup supervisor_pilot  5219 20006
[2025-06-03 02:56:11] 2025-06-03 06:56:11,423 [wrapper] Test setup, not cleaning
[2025-06-03 02:56:11] 2025-06-03 06:56:11,428 [wrapper] apfmon messages muted
[2025-06-03 02:56:11] 2025-06-03 06:56:11,432 [wrapper] ==== wrapper stdout END ====
[2025-06-03 02:56:11] 2025-06-03 06:56:11,436 [wrapper] ==== wrapper stderr END ====
[2025-06-03 02:56:11]  *** Error codes and diagnostics ***
[2025-06-03 02:56:11]     "exeErrorCode": 0,
[2025-06-03 02:56:11]     "exeErrorDiag": "",
[2025-06-03 02:56:11]     "pilotErrorCode": 0,
[2025-06-03 02:56:11]     "pilotErrorDiag": "",
[2025-06-03 02:56:11]  *** Listing of results directory ***
[2025-06-03 02:56:11] total 387228
[2025-06-03 02:56:11] -rw-r--r-- 1 boincer umatlas    495897 Jun  2 20:19 pilot3.tar.gz
[2025-06-03 02:56:11] -rw-r--r-- 1 boincer umatlas      5111 Jun  2 20:30 queuedata.json
[2025-06-03 02:56:11] -rwx------ 1 boincer umatlas     37140 Jun  2 20:31 runpilot2-wrapper.sh
[2025-06-03 02:56:11] -rw-r--r-- 1 boincer umatlas       100 Jun  3 02:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 02:56:11] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 02:04 run_atlas
[2025-06-03 02:56:11] -rw-r--r-- 1 boincer umatlas       105 Jun  3 02:04 job.xml
[2025-06-03 02:56:11] -rw-r--r-- 2 boincer umatlas 215440635 Jun  3 02:04 EVNT.45006593._000611.pool.root.1
[2025-06-03 02:56:11] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 02:04 start_atlas.sh
[2025-06-03 02:56:11] drwxrwx--x 2 boincer umatlas      4096 Jun  3 02:04 shared
[2025-06-03 02:56:11] -rw-r--r-- 2 boincer umatlas    508878 Jun  3 02:04 input.tar.gz
[2025-06-03 02:56:11] -rw-r--r-- 1 boincer umatlas         0 Jun  3 02:04 boinc_lockfile
[2025-06-03 02:56:11] -rw-r--r-- 1 boincer umatlas      2524 Jun  3 02:04 pandaJob.out
[2025-06-03 02:56:11] -rw------- 1 boincer umatlas    986901 Jun  3 02:05 agis_schedconf.cvmfs.json
[2025-06-03 02:56:11] -rw------- 1 boincer umatlas   1603667 Jun  3 02:05 agis_ddmendpoints.agis.ALL.json
[2025-06-03 02:56:11] drwx------ 4 boincer umatlas      4096 Jun  3 02:05 pilot3
[2025-06-03 02:56:11] -rw-r--r-- 1 boincer umatlas      6228 Jun  3 02:49 init_data.xml
[2025-06-03 02:56:11] -rw------- 1 boincer umatlas 175978289 Jun  3 02:55 HITS.45006595._015260.pool.root.1
[2025-06-03 02:56:11] -rw-r--r-- 1 boincer umatlas       529 Jun  3 02:55 boinc_task_state.xml
[2025-06-03 02:56:11] -rw------- 1 boincer umatlas      1044 Jun  3 02:55 memory_monitor_summary.json
[2025-06-03 02:56:11] -rw------- 1 boincer umatlas        95 Jun  3 02:55 pilot_heartbeat.json
[2025-06-03 02:56:11] -rw------- 1 boincer umatlas    312558 Jun  3 02:55 log.45006595._015260.job.log.tgz.1
[2025-06-03 02:56:11] -rw------- 1 boincer umatlas      7735 Jun  3 02:55 heartbeat.json
[2025-06-03 02:56:11] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 02:56 boinc_mmap_file
[2025-06-03 02:56:11] -rw-r--r-- 1 boincer umatlas        27 Jun  3 02:56 wrapper_checkpoint.txt
[2025-06-03 02:56:11] -rw------- 1 boincer umatlas      4548 Jun  3 02:56 pilotlog.txt
[2025-06-03 02:56:11] -rw------- 1 boincer umatlas    320107 Jun  3 02:56 log.45006595._015260.job.log.1
[2025-06-03 02:56:11] -rw------- 1 boincer umatlas       357 Jun  3 02:56 output.list
[2025-06-03 02:56:11] -rw-r--r-- 1 boincer umatlas       620 Jun  3 02:56 runtime_log
[2025-06-03 02:56:11] -rw------- 1 boincer umatlas    655360 Jun  3 02:56 result.tar.gz
[2025-06-03 02:56:11] -rw-r--r-- 1 boincer umatlas      8661 Jun  3 02:56 runtime_log.err
[2025-06-03 02:56:11] -rw------- 1 boincer umatlas       657 Jun  3 02:56 h2ZLDmnjUg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuGhKDmpV3sUm.diag
[2025-06-03 02:56:11] -rw-r--r-- 1 boincer umatlas     22501 Jun  3 02:56 stderr.txt
[2025-06-03 02:56:11] HITS file was successfully produced:
[2025-06-03 02:56:11] -rw------- 1 boincer umatlas 175978289 Jun  3 02:55 shared/HITS.pool.root.1
[2025-06-03 02:56:11]  *** Contents of shared directory: ***
[2025-06-03 02:56:11] total 383408
[2025-06-03 02:56:11] -rw-r--r-- 2 boincer umatlas 215440635 Jun  3 02:04 ATLAS.root_0
[2025-06-03 02:56:11] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 02:04 start_atlas.sh
[2025-06-03 02:56:11] -rw-r--r-- 2 boincer umatlas    508878 Jun  3 02:04 input.tar.gz
[2025-06-03 02:56:11] -rw------- 1 boincer umatlas 175978289 Jun  3 02:55 HITS.pool.root.1
[2025-06-03 02:56:11] -rw------- 1 boincer umatlas    655360 Jun  3 02:56 result.tar.gz
02:56:13 (15833): run_atlas exited; CPU time 27122.093974
02:56:13 (15833): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN