Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:02:41 (948945): wrapper (7.7.26015): starting
02:02:41 (948945): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 02:02:41] Arguments: --nthreads 8
[2025-06-03 02:02:41] Threads: 8
[2025-06-03 02:02:41] Checking for CVMFS
[2025-06-03 02:02:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 02:02:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 02:02:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 02:02:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 02:02:41] 2.12.6.0 3036893 21475 432244 146731 0 420 32684450 32935936 11306 16776704 0 105801846 99.636 95970271 24436 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 02:02:41] CVMFS is ok
[2025-06-03 02:02:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 02:02:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 02:02:41] Further information can be found at the LHC@home message board.
[2025-06-03 02:02:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 02:02:41] Checking for apptainer binary...
[2025-06-03 02:02:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 02:02:41] Running /usr/bin/apptainer --version
[2025-06-03 02:02:41] apptainer version 1.4.1-1.el9
[2025-06-03 02:02:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 02:02:41] c6-12-29-4.aglt2.org
[2025-06-03 02:02:41] apptainer works
[2025-06-03 02:02:41] Set ATHENA_PROC_NUMBER=8
[2025-06-03 02:02:41] Set ATHENA_CORE_NUMBER=8
[2025-06-03 02:02:41] Starting ATLAS job with PandaID=6677443526
[2025-06-03 02:02:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 03:33:56]  *** The last 200 lines of the pilot log: ***
[2025-06-03 03:33:56]  filesize=304979
[2025-06-03 03:33:56]  filetype=log
[2025-06-03 03:33:56]  guid=0c613af5-681d-4c5f-b623-a3243d6a5f47
[2025-06-03 03:33:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 03:33:56]  is_altstaged=None
[2025-06-03 03:33:56]  is_tar=False
[2025-06-03 03:33:56]  lfn=log.45006595._017034.job.log.tgz.1
[2025-06-03 03:33:56]  mtime=0
[2025-06-03 03:33:56]  protocol_id=None
[2025-06-03 03:33:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 03:33:56]  replicas=None
[2025-06-03 03:33:56]  scope=mc23_13p6TeV
[2025-06-03 03:33:56]  status=None
[2025-06-03 03:33:56]  status_code=0
[2025-06-03 03:33:56]  storage_token=
[2025-06-03 03:33:56]  surl=/tmp/boinchome/slots/7/PanDA_Pilot-6677443526/log.45006595._017034.job.log.tgz.1
[2025-06-03 03:33:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/8b/log.45006595._017034.job.log.tgz.1
[2025-06-03 03:33:56]  workdir=None
[2025-06-03 03:33:56] ]
[2025-06-03 03:33:56] 2025-06-03 07:33:39,835 | INFO     | transferring file log.45006595._017034.job.log.tgz.1 from /tmp/boinchome/slots/7/PanDA_Pilot-6677443526/log.45006595._017034.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 03:33:56] 2025-06-03 07:33:39,835 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-6677443526/log.45006595._017034.job.log.tgz.1 /tmp/boinchome/slots/7/log.45006595._017034.job
[2025-06-03 03:33:56] 2025-06-03 07:33:39,853 | INFO     | adding to output.list: log.45006595._017034.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/8b/log.45006595._017034.job.log.tg
[2025-06-03 03:33:56] 2025-06-03 07:33:39,854 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 03:33:56] 2025-06-03 07:33:39,854 | INFO     | summary of transferred files:
[2025-06-03 03:33:56] 2025-06-03 07:33:39,854 | INFO     |  -- lfn=log.45006595._017034.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 03:33:56] 2025-06-03 07:33:39,855 | INFO     | stage-out finished correctly
[2025-06-03 03:33:56] 2025-06-03 07:33:40,192 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 03:33:56] 2025-06-03 07:33:40,283 | INFO     | job 6677443526 has state=finished
[2025-06-03 03:33:56] 2025-06-03 07:33:40,283 | INFO     | preparing for final server update for job 6677443526 in state='finished'
[2025-06-03 03:33:56] 2025-06-03 07:33:40,283 | INFO     | this job has now completed (state=finished)
[2025-06-03 03:33:56] 2025-06-03 07:33:40,284 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 03:33:56] 2025-06-03 07:33:40,284 | INFO     | log transfer has been attempted: DONE
[2025-06-03 03:33:56] 2025-06-03 07:33:40,284 | INFO     | job 6677443526 has finished - writing final server update
[2025-06-03 03:33:56] 2025-06-03 07:33:40,284 | INFO     | total number of processed events: 400 (read)
[2025-06-03 03:33:56] 2025-06-03 07:33:40,301 | INFO     | executing command: lscpu
[2025-06-03 03:33:56] 2025-06-03 07:33:40,364 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 03:33:56] 2025-06-03 07:33:41,252 | INFO     | monitor loop #390: job 0:6677443526 is in state 'finished'
[2025-06-03 03:33:56] 2025-06-03 07:33:41,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 03:33:56] 2025-06-03 07:33:43,543 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 03:33:56] 2025-06-03 07:33:43,544 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6677443526/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 03:33:56] 2025-06-03 07:33:43,545 | INFO     | extracted standard info from prmon json
[2025-06-03 03:33:56] 2025-06-03 07:33:43,545 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 03:33:56] 2025-06-03 07:33:43,545 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 03:33:56] 2025-06-03 07:33:43,545 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 03:33:56] 2025-06-03 07:33:43,546 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 03:33:56] 2025-06-03 07:33:43,548 | INFO     | fitting pss+swap vs Time
[2025-06-03 03:33:56] 2025-06-03 07:33:43,548 | INFO     | sum of square deviations: 170940636.4878044
[2025-06-03 03:33:56] 2025-06-03 07:33:43,549 | INFO     | sum of deviations: 13129877350.731705
[2025-06-03 03:33:56] 2025-06-03 07:33:43,549 | INFO     | mean x: 1748933368.512195
[2025-06-03 03:33:56] 2025-06-03 07:33:43,549 | INFO     | mean y: 2101815.7682926827
[2025-06-03 03:33:56] 2025-06-03 07:33:43,549 | INFO     | -- intersect: -134332723975.08728
[2025-06-03 03:33:56] 2025-06-03 07:33:43,549 | INFO     | intersect: -134332723975.08728
[2025-06-03 03:33:56] 2025-06-03 07:33:43,549 | INFO     | chi2: 1.0583344723560104
[2025-06-03 03:33:56] 2025-06-03 07:33:43,550 | INFO     | -- intersect: -134332723975.08728
[2025-06-03 03:33:56] 2025-06-03 07:33:43,550 | INFO     | current memory leak: 76.81 B/s (using 82 data points, chi2=1.06)
[2025-06-03 03:33:56] 2025-06-03 07:33:43,550 | INFO     | ..............................
[2025-06-03 03:33:56] 2025-06-03 07:33:43,550 | INFO     | . Timing measurements:
[2025-06-03 03:33:56] 2025-06-03 07:33:43,550 | INFO     | . get job = 0 s
[2025-06-03 03:33:56] 2025-06-03 07:33:43,551 | INFO     | . initial setup = 2 s
[2025-06-03 03:33:56] 2025-06-03 07:33:43,551 | INFO     | . payload setup = 5 s
[2025-06-03 03:33:56] 2025-06-03 07:33:43,551 | INFO     | . stage-in = 0 s
[2025-06-03 03:33:56] 2025-06-03 07:33:43,551 | INFO     | . payload execution = 5426 s
[2025-06-03 03:33:56] 2025-06-03 07:33:43,551 | INFO     | . stage-out = 0 s
[2025-06-03 03:33:56] 2025-06-03 07:33:43,551 | INFO     | . log creation = 0 s
[2025-06-03 03:33:56] 2025-06-03 07:33:43,551 | INFO     | ..............................
[2025-06-03 03:33:56] 2025-06-03 07:33:43,663 | INFO     | 
[2025-06-03 03:33:56] 2025-06-03 07:33:43,663 | INFO     | job summary report
[2025-06-03 03:33:56] 2025-06-03 07:33:43,663 | INFO     | --------------------------------------------------
[2025-06-03 03:33:56] 2025-06-03 07:33:43,663 | INFO     | PanDA job id: 6677443526
[2025-06-03 03:33:56] 2025-06-03 07:33:43,663 | INFO     | task id: 45006595
[2025-06-03 03:33:56] 2025-06-03 07:33:43,663 | INFO     | errors: (none)
[2025-06-03 03:33:56] 2025-06-03 07:33:43,663 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 03:33:56] 2025-06-03 07:33:43,663 | INFO     | pilot state: finished 
[2025-06-03 03:33:56] 2025-06-03 07:33:43,663 | INFO     | transexitcode: 0
[2025-06-03 03:33:56] 2025-06-03 07:33:43,664 | INFO     | exeerrorcode: 0
[2025-06-03 03:33:56] 2025-06-03 07:33:43,664 | INFO     | exeerrordiag: 
[2025-06-03 03:33:56] 2025-06-03 07:33:43,664 | INFO     | exitcode: 0
[2025-06-03 03:33:56] 2025-06-03 07:33:43,664 | INFO     | exitmsg: OK
[2025-06-03 03:33:56] 2025-06-03 07:33:43,664 | INFO     | cpuconsumptiontime: 36639 s
[2025-06-03 03:33:56] 2025-06-03 07:33:43,664 | INFO     | nevents: 400
[2025-06-03 03:33:56] 2025-06-03 07:33:43,664 | INFO     | neventsw: 0
[2025-06-03 03:33:56] 2025-06-03 07:33:43,664 | INFO     | pid: 985593
[2025-06-03 03:33:56] 2025-06-03 07:33:43,664 | INFO     | pgrp: 985593
[2025-06-03 03:33:56] 2025-06-03 07:33:43,664 | INFO     | corecount: 8
[2025-06-03 03:33:56] 2025-06-03 07:33:43,664 | INFO     | event service: False
[2025-06-03 03:33:56] 2025-06-03 07:33:43,664 | INFO     | sizes: {0: 2405182, 4: 2405388, 11: 2405416, 5434: 2431963, 5435: 2440960, 5439: 2441074}
[2025-06-03 03:33:56] 2025-06-03 07:33:43,664 | INFO     | --------------------------------------------------
[2025-06-03 03:33:56] 2025-06-03 07:33:43,664 | INFO     | 
[2025-06-03 03:33:56] 2025-06-03 07:33:43,665 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-06-03 03:33:56] 2025-06-03 07:33:43,678 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 03:33:56] 2025-06-03 07:33:43,679 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 03:33:56] 2025-06-03 07:33:43,679 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 03:33:56] 2025-06-03 07:33:43,679 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 03:33:56] 2025-06-03 07:33:43,679 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 03:33:56] 2025-06-03 07:33:43,679 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 03:33:56] 2025-06-03 07:33:43,679 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 03:33:56] 2025-06-03 07:33:43,679 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 03:33:56] 2025-06-03 07:33:43,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 03:33:56] 2025-06-03 07:33:43,679 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 03:33:56] 2025-06-03 07:33:43,679 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 03:33:56] 2025-06-03 07:33:43,680 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 03:33:56] 2025-06-03 07:33:43,680 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 03:33:56] 2025-06-03 07:33:43,680 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 03:33:56] 2025-06-03 07:33:43,680 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 03:33:56] 2025-06-03 07:33:43,680 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 03:33:56] 2025-06-03 07:33:43,680 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 03:33:56] 2025-06-03 07:33:43,680 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 03:33:56] 2025-06-03 07:33:43,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 03:33:56] 2025-06-03 07:33:43,680 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 03:33:56] 2025-06-03 07:33:43,680 | INFO     | job 6677443526 has completed (purged errors)
[2025-06-03 03:33:56] 2025-06-03 07:33:43,680 | INFO     | overall cleanup function is called
[2025-06-03 03:33:56] 2025-06-03 07:33:44,688 | INFO     | --- collectZombieJob: --- 10, [985593]
[2025-06-03 03:33:56] 2025-06-03 07:33:44,689 | INFO     | zombie collector waiting for pid 985593
[2025-06-03 03:33:56] 2025-06-03 07:33:44,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 03:33:56] 2025-06-03 07:33:44,689 | INFO     | collected zombie processes
[2025-06-03 03:33:56] 2025-06-03 07:33:44,689 | INFO     | will attempt to kill all subprocesses of pid=985593
[2025-06-03 03:33:56] 2025-06-03 07:33:45,057 | INFO     | process IDs to be killed: [985593] (in reverse order)
[2025-06-03 03:33:56] 2025-06-03 07:33:45,161 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 03:33:56] 2025-06-03 07:33:45,161 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 03:33:56] 2025-06-03 07:33:45,176 | INFO     | did not find any defunct processes belonging to 985593
[2025-06-03 03:33:56] 2025-06-03 07:33:45,189 | INFO     | did not find any defunct processes belonging to 985593
[2025-06-03 03:33:56] 2025-06-03 07:33:45,190 | INFO     | ready for new job
[2025-06-03 03:33:56] 2025-06-03 07:33:45,190 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 03:33:56] 2025-06-03 07:33:45,192 | INFO     | **************************************
[2025-06-03 03:33:56] 2025-06-03 07:33:45,192 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 03:33:56] 2025-06-03 07:33:45,192 | INFO     | **************************************
[2025-06-03 03:33:56] 2025-06-03 07:33:45,192 | INFO     | 
[2025-06-03 03:33:56] 2025-06-03 07:33:45,209 | INFO     | architecture information:
[2025-06-03 03:33:56] 2025-06-03 07:33:45,209 | INFO     | executing command: cat /etc/os-release
[2025-06-03 03:33:56] 2025-06-03 07:33:45,224 | INFO     | cat /etc/os-release:
[2025-06-03 03:33:56] NAME="CentOS Linux"
[2025-06-03 03:33:56] VERSION="7 (Core)"
[2025-06-03 03:33:56] ID="centos"
[2025-06-03 03:33:56] ID_LIKE="rhel fedora"
[2025-06-03 03:33:56] VERSION_ID="7"
[2025-06-03 03:33:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 03:33:56] ANSI_COLOR="0;31"
[2025-06-03 03:33:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 03:33:56] HOME_URL="https://www.centos.org/"
[2025-06-03 03:33:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 03:33:56] 
[2025-06-03 03:33:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 03:33:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 03:33:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 03:33:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 03:33:56] 
[2025-06-03 03:33:56] 2025-06-03 07:33:45,224 | INFO     | **************************************
[2025-06-03 03:33:56] 2025-06-03 07:33:45,729 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-06-03 03:33:56] 2025-06-03 07:33:45,763 | INFO     | sufficient remaining disk space (90000326656 B)
[2025-06-03 03:33:56] 2025-06-03 07:33:45,763 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 03:33:56] 2025-06-03 07:33:45,764 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 03:33:56] 2025-06-03 07:33:45,764 | INFO     | update_server=False
[2025-06-03 03:33:56] 2025-06-03 07:33:45,764 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 03:33:56] 2025-06-03 07:33:45,764 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 03:33:56] 2025-06-03 07:33:45,764 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 03:33:56] 2025-06-03 07:33:45,765 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 03:33:56] 2025-06-03 07:33:45,765 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 03:33:56] 2025-06-03 07:33:45,766 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 03:33:56] 2025-06-03 07:33:46,263 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 03:33:56] 2025-06-03 07:33:46,263 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 03:33:56] 2025-06-03 07:33:46,263 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:33:56] 2025-06-03 07:33:46,263 | INFO     | will abort loop
[2025-06-03 03:33:56] 2025-06-03 07:33:46,290 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 03:33:56] 2025-06-03 07:33:46,507 | INFO     | all data control threads have been joined
[2025-06-03 03:33:56] 2025-06-03 07:33:46,766 | INFO     | [job] retrieve thread has finished
[2025-06-03 03:33:56] 2025-06-03 07:33:46,856 | INFO     | all payload control threads have been joined
[2025-06-03 03:33:56] 2025-06-03 07:33:46,940 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 03:33:56] 2025-06-03 07:33:47,226 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 03:33:56] 2025-06-03 07:33:47,269 | INFO     | [job] job monitor thread has finished
[2025-06-03 03:33:56] 2025-06-03 07:33:47,357 | INFO     | all job control threads have been joined
[2025-06-03 03:33:56] 2025-06-03 07:33:47,498 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 03:33:56] 2025-06-03 07:33:47,513 | INFO     | [data] control thread has finished
[2025-06-03 03:33:56] 2025-06-03 07:33:47,770 | INFO     | [data] copytool_out thread has finished
[2025-06-03 03:33:56] 2025-06-03 07:33:47,862 | INFO     | [payload] control thread has finished
[2025-06-03 03:33:56] 2025-06-03 07:33:47,983 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 03:33:56] 2025-06-03 07:33:48,092 | INFO     | [payload] validate_post thread has finished
[2025-06-03 03:33:56] 2025-06-03 07:33:48,100 | INFO     | [payload] failed_post thread has finished
[2025-06-03 03:33:56] 2025-06-03 07:33:48,110 | INFO     | [job] validate thread has finished
[2025-06-03 03:33:56] 2025-06-03 07:33:48,118 | INFO     | [data] copytool_in thread has finished
[2025-06-03 03:33:56] 2025-06-03 07:33:48,363 | INFO     | [job] control thread has finished
[2025-06-03 03:33:56] 2025-06-03 07:33:48,669 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:33:56] 2025-06-03 07:33:49,674 | INFO     | [job] queue monitor thread has finished
[2025-06-03 03:33:56] 2025-06-03 07:33:50,296 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 03:33:56] 2025-06-03 07:33:51,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140482090542912)>', '<ExcThread(monitor, started 140481442858752)>']
[2025-06-03 03:33:56] 2025-06-03 07:33:51,791 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 03:33:56] 2025-06-03 07:33:51,791 | INFO     | [monitor] control thread has ended
[2025-06-03 03:33:56] 2025-06-03 07:33:56,628 | INFO     | all workflow threads have been joined
[2025-06-03 03:33:56] 2025-06-03 07:33:56,628 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 03:33:56] 2025-06-03 07:33:56,628 | INFO     | traces error code: 0
[2025-06-03 03:33:56] 2025-06-03 07:33:56,628 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 03:33:56] 2025-06-03 07:33:56,768 [wrapper] ==== pilot stdout END ====
[2025-06-03 03:33:56] 2025-06-03 07:33:56,772 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 03:33:56] 2025-06-03 07:33:56,774 [wrapper] pilotpid: 961989
[2025-06-03 03:33:56] 2025-06-03 07:33:56,776 [wrapper] Pilot exit status: 0
[2025-06-03 03:33:56] 2025-06-03 07:33:56,785 [wrapper] pandaids: 6677443526
[2025-06-03 03:33:56] 2025-06-03 07:33:56,851 [wrapper] cleanup supervisor_pilot 1300751 961990
[2025-06-03 03:33:56] 2025-06-03 07:33:56,853 [wrapper] Test setup, not cleaning
[2025-06-03 03:33:56] 2025-06-03 07:33:56,855 [wrapper] apfmon messages muted
[2025-06-03 03:33:56] 2025-06-03 07:33:56,858 [wrapper] ==== wrapper stdout END ====
[2025-06-03 03:33:56] 2025-06-03 07:33:56,860 [wrapper] ==== wrapper stderr END ====
[2025-06-03 03:33:56]  *** Error codes and diagnostics ***
[2025-06-03 03:33:56]     "exeErrorCode": 0,
[2025-06-03 03:33:56]     "exeErrorDiag": "",
[2025-06-03 03:33:56]     "pilotErrorCode": 0,
[2025-06-03 03:33:56]     "pilotErrorDiag": "",
[2025-06-03 03:33:56]  *** Listing of results directory ***
[2025-06-03 03:33:56] total 385112
[2025-06-03 03:33:56] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 21:51 pilot3.tar.gz
[2025-06-03 03:33:56] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 22:17 queuedata.json
[2025-06-03 03:33:56] -rwx------. 1 boincer umatlas     37140 Jun  2 22:17 runpilot2-wrapper.sh
[2025-06-03 03:33:56] -rw-r--r--. 1 boincer umatlas       100 Jun  3 02:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 03:33:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 02:02 run_atlas
[2025-06-03 03:33:56] -rw-r--r--. 1 boincer umatlas       105 Jun  3 02:02 job.xml
[2025-06-03 03:33:56] -rw-r--r--. 2 boincer umatlas 214370747 Jun  3 02:02 EVNT.45006593._000682.pool.root.1
[2025-06-03 03:33:56] -rw-r--r--. 2 boincer umatlas    508880 Jun  3 02:02 input.tar.gz
[2025-06-03 03:33:56] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 02:02 start_atlas.sh
[2025-06-03 03:33:56] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 02:02 shared
[2025-06-03 03:33:56] -rw-r--r--. 1 boincer umatlas         0 Jun  3 02:02 boinc_lockfile
[2025-06-03 03:33:56] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 02:02 pandaJob.out
[2025-06-03 03:33:56] -rw-------. 1 boincer umatlas    986901 Jun  3 02:02 agis_schedconf.cvmfs.json
[2025-06-03 03:33:56] -rw-------. 1 boincer umatlas   1603667 Jun  3 02:02 agis_ddmendpoints.agis.ALL.json
[2025-06-03 03:33:56] drwx------. 4 boincer umatlas      4096 Jun  3 02:02 pilot3
[2025-06-03 03:33:56] -rw-r--r--. 1 boincer umatlas      6860 Jun  3 03:30 init_data.xml
[2025-06-03 03:33:56] -rw-------. 1 boincer umatlas 174488037 Jun  3 03:33 HITS.45006595._017034.pool.root.1
[2025-06-03 03:33:56] -rw-r--r--. 1 boincer umatlas       529 Jun  3 03:33 boinc_task_state.xml
[2025-06-03 03:33:56] -rw-------. 1 boincer umatlas      1038 Jun  3 03:33 memory_monitor_summary.json
[2025-06-03 03:33:56] -rw-------. 1 boincer umatlas        95 Jun  3 03:33 pilot_heartbeat.json
[2025-06-03 03:33:56] -rw-------. 1 boincer umatlas    304979 Jun  3 03:33 log.45006595._017034.job.log.tgz.1
[2025-06-03 03:33:56] -rw-------. 1 boincer umatlas      7717 Jun  3 03:33 heartbeat.json
[2025-06-03 03:33:56] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 03:33 boinc_mmap_file
[2025-06-03 03:33:56] -rw-r--r--. 1 boincer umatlas        27 Jun  3 03:33 wrapper_checkpoint.txt
[2025-06-03 03:33:56] -rw-------. 1 boincer umatlas      4662 Jun  3 03:33 pilotlog.txt
[2025-06-03 03:33:56] -rw-------. 1 boincer umatlas    523727 Jun  3 03:33 log.45006595._017034.job.log.1
[2025-06-03 03:33:56] -rw-------. 1 boincer umatlas       357 Jun  3 03:33 output.list
[2025-06-03 03:33:56] -rw-r--r--. 1 boincer umatlas       620 Jun  3 03:33 runtime_log
[2025-06-03 03:33:56] -rw-------. 1 boincer umatlas    849920 Jun  3 03:33 result.tar.gz
[2025-06-03 03:33:56] -rw-r--r--. 1 boincer umatlas      8669 Jun  3 03:33 runtime_log.err
[2025-06-03 03:33:56] -rw-------. 1 boincer umatlas       654 Jun  3 03:33 A6WMDmwOWg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmjAXKDmMe8mQn.diag
[2025-06-03 03:33:56] -rw-r--r--. 1 boincer umatlas     21119 Jun  3 03:33 stderr.txt
[2025-06-03 03:33:56] HITS file was successfully produced:
[2025-06-03 03:33:56] -rw-------. 1 boincer umatlas 174488037 Jun  3 03:33 shared/HITS.pool.root.1
[2025-06-03 03:33:56]  *** Contents of shared directory: ***
[2025-06-03 03:33:56] total 381104
[2025-06-03 03:33:56] -rw-r--r--. 2 boincer umatlas 214370747 Jun  3 02:02 ATLAS.root_0
[2025-06-03 03:33:56] -rw-r--r--. 2 boincer umatlas    508880 Jun  3 02:02 input.tar.gz
[2025-06-03 03:33:56] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 02:02 start_atlas.sh
[2025-06-03 03:33:56] -rw-------. 1 boincer umatlas 174488037 Jun  3 03:33 HITS.pool.root.1
[2025-06-03 03:33:56] -rw-------. 1 boincer umatlas    849920 Jun  3 03:33 result.tar.gz
03:33:58 (948945): run_atlas exited; CPU time 36871.505163
03:33:58 (948945): called boinc_finish(0)

</stderr_txt>
]]>

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