Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:01:50 (902932): wrapper (7.7.26015): starting
02:01:50 (902932): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 02:01:50] Arguments: --nthreads 8
[2025-06-03 02:01:50] Threads: 8
[2025-06-03 02:01:50] Checking for CVMFS
[2025-06-03 02:01:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 02:01:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 02:01:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 02:01:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 02:01:51] 2.12.6.0 3036893 21474 432556 146731 1 420 32684275 32935936 10211 16776704 0 105680792 99.635 95970271 24436 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 02:01:51] CVMFS is ok
[2025-06-03 02:01:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 02:01:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 02:01:51] Further information can be found at the LHC@home message board.
[2025-06-03 02:01:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 02:01:51] Checking for apptainer binary...
[2025-06-03 02:01:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 02:01:51] Running /usr/bin/apptainer --version
[2025-06-03 02:01:51] apptainer version 1.4.1-1.el9
[2025-06-03 02:01:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 02:01:51] c6-12-29-4.aglt2.org
[2025-06-03 02:01:51] apptainer works
[2025-06-03 02:01:51] Set ATHENA_PROC_NUMBER=8
[2025-06-03 02:01:51] Set ATHENA_CORE_NUMBER=8
[2025-06-03 02:01:51] Starting ATLAS job with PandaID=6677443239
[2025-06-03 02:01:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 03:34:00]  *** The last 200 lines of the pilot log: ***
[2025-06-03 03:34:00]  is_altstaged=None
[2025-06-03 03:34:00]  is_tar=False
[2025-06-03 03:34:00]  lfn=log.45006595._016815.job.log.tgz.1
[2025-06-03 03:34:00]  mtime=0
[2025-06-03 03:34:00]  protocol_id=None
[2025-06-03 03:34:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 03:34:00]  replicas=None
[2025-06-03 03:34:00]  scope=mc23_13p6TeV
[2025-06-03 03:34:00]  status=None
[2025-06-03 03:34:00]  status_code=0
[2025-06-03 03:34:00]  storage_token=
[2025-06-03 03:34:00]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6677443239/log.45006595._016815.job.log.tgz.1
[2025-06-03 03:34:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/57/log.45006595._016815.job.log.tgz.1
[2025-06-03 03:34:00]  workdir=None
[2025-06-03 03:34:00] ]
[2025-06-03 03:34:00] 2025-06-03 07:33:33,254 | INFO     | transferring file log.45006595._016815.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6677443239/log.45006595._016815.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 03:34:00] 2025-06-03 07:33:33,255 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6677443239/log.45006595._016815.job.log.tgz.1 /tmp/boinchome/slots/3/log.45006595._016815.job
[2025-06-03 03:34:00] 2025-06-03 07:33:33,276 | INFO     | adding to output.list: log.45006595._016815.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/57/log.45006595._016815.job.log.tg
[2025-06-03 03:34:00] 2025-06-03 07:33:33,276 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 03:34:00] 2025-06-03 07:33:33,277 | INFO     | summary of transferred files:
[2025-06-03 03:34:00] 2025-06-03 07:33:33,277 | INFO     |  -- lfn=log.45006595._016815.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 03:34:00] 2025-06-03 07:33:33,277 | INFO     | stage-out finished correctly
[2025-06-03 03:34:00] 2025-06-03 07:33:36,486 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 03:34:00] 2025-06-03 07:33:36,558 | INFO     | job 6677443239 has state=finished
[2025-06-03 03:34:00] 2025-06-03 07:33:36,559 | INFO     | preparing for final server update for job 6677443239 in state='finished'
[2025-06-03 03:34:00] 2025-06-03 07:33:36,559 | INFO     | this job has now completed (state=finished)
[2025-06-03 03:34:00] 2025-06-03 07:33:36,559 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 03:34:00] 2025-06-03 07:33:36,559 | INFO     | log transfer has been attempted: DONE
[2025-06-03 03:34:00] 2025-06-03 07:33:36,560 | INFO     | job 6677443239 has finished - writing final server update
[2025-06-03 03:34:00] 2025-06-03 07:33:36,560 | INFO     | total number of processed events: 400 (read)
[2025-06-03 03:34:00] 2025-06-03 07:33:36,578 | INFO     | executing command: lscpu
[2025-06-03 03:34:00] 2025-06-03 07:33:36,649 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 03:34:00] 2025-06-03 07:33:37,003 | WARNING  | process 921314 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 03:34:00] 2025-06-03 07:33:37,004 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677443239/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 03:34:00] 2025-06-03 07:33:37,355 | INFO     | number of running child processes to parent process 921314: 1
[2025-06-03 03:34:00] 2025-06-03 07:33:37,355 | INFO     | maximum number of monitored processes: 6
[2025-06-03 03:34:00] 2025-06-03 07:33:39,858 | INFO     | monitor loop #392: job 0:6677443239 is in state 'finished'
[2025-06-03 03:34:00] 2025-06-03 07:33:39,858 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 03:34:00] 2025-06-03 07:33:40,006 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 03:34:00] 2025-06-03 07:33:40,006 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677443239/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 03:34:00] 2025-06-03 07:33:40,006 | INFO     | extracted standard info from prmon json
[2025-06-03 03:34:00] 2025-06-03 07:33:40,007 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 03:34:00] 2025-06-03 07:33:40,007 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 03:34:00] 2025-06-03 07:33:40,007 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 03:34:00] 2025-06-03 07:33:40,007 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 03:34:00] 2025-06-03 07:33:40,009 | INFO     | fitting pss+swap vs Time
[2025-06-03 03:34:00] 2025-06-03 07:33:40,009 | INFO     | sum of square deviations: 177272100.98795226
[2025-06-03 03:34:00] 2025-06-03 07:33:40,010 | INFO     | sum of deviations: 12440194328.626514
[2025-06-03 03:34:00] 2025-06-03 07:33:40,010 | INFO     | mean x: 1748933351.0120482
[2025-06-03 03:34:00] 2025-06-03 07:33:40,010 | INFO     | mean y: 2113936.373493976
[2025-06-03 03:34:00] 2025-06-03 07:33:40,010 | INFO     | -- intersect: -122730513663.52448
[2025-06-03 03:34:00] 2025-06-03 07:33:40,010 | INFO     | intersect: -122730513663.52448
[2025-06-03 03:34:00] 2025-06-03 07:33:40,010 | INFO     | chi2: 1.1488752734280427
[2025-06-03 03:34:00] 2025-06-03 07:33:40,010 | INFO     | -- intersect: -122730513663.52448
[2025-06-03 03:34:00] 2025-06-03 07:33:40,010 | INFO     | current memory leak: 70.18 B/s (using 83 data points, chi2=1.15)
[2025-06-03 03:34:00] 2025-06-03 07:33:40,011 | INFO     | ..............................
[2025-06-03 03:34:00] 2025-06-03 07:33:40,011 | INFO     | . Timing measurements:
[2025-06-03 03:34:00] 2025-06-03 07:33:40,011 | INFO     | . get job = 0 s
[2025-06-03 03:34:00] 2025-06-03 07:33:40,011 | INFO     | . initial setup = 2 s
[2025-06-03 03:34:00] 2025-06-03 07:33:40,011 | INFO     | . payload setup = 5 s
[2025-06-03 03:34:00] 2025-06-03 07:33:40,011 | INFO     | . stage-in = 0 s
[2025-06-03 03:34:00] 2025-06-03 07:33:40,011 | INFO     | . payload execution = 5469 s
[2025-06-03 03:34:00] 2025-06-03 07:33:40,011 | INFO     | . stage-out = 0 s
[2025-06-03 03:34:00] 2025-06-03 07:33:40,011 | INFO     | . log creation = 0 s
[2025-06-03 03:34:00] 2025-06-03 07:33:40,011 | INFO     | ..............................
[2025-06-03 03:34:00] 2025-06-03 07:33:40,104 | INFO     | 
[2025-06-03 03:34:00] 2025-06-03 07:33:40,104 | INFO     | job summary report
[2025-06-03 03:34:00] 2025-06-03 07:33:40,104 | INFO     | --------------------------------------------------
[2025-06-03 03:34:00] 2025-06-03 07:33:40,104 | INFO     | PanDA job id: 6677443239
[2025-06-03 03:34:00] 2025-06-03 07:33:40,105 | INFO     | task id: 45006595
[2025-06-03 03:34:00] 2025-06-03 07:33:40,105 | INFO     | errors: (none)
[2025-06-03 03:34:00] 2025-06-03 07:33:40,105 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 03:34:00] 2025-06-03 07:33:40,105 | INFO     | pilot state: finished 
[2025-06-03 03:34:00] 2025-06-03 07:33:40,105 | INFO     | transexitcode: 0
[2025-06-03 03:34:00] 2025-06-03 07:33:40,105 | INFO     | exeerrorcode: 0
[2025-06-03 03:34:00] 2025-06-03 07:33:40,105 | INFO     | exeerrordiag: 
[2025-06-03 03:34:00] 2025-06-03 07:33:40,105 | INFO     | exitcode: 0
[2025-06-03 03:34:00] 2025-06-03 07:33:40,105 | INFO     | exitmsg: OK
[2025-06-03 03:34:00] 2025-06-03 07:33:40,105 | INFO     | cpuconsumptiontime: 37240 s
[2025-06-03 03:34:00] 2025-06-03 07:33:40,105 | INFO     | nevents: 400
[2025-06-03 03:34:00] 2025-06-03 07:33:40,105 | INFO     | neventsw: 0
[2025-06-03 03:34:00] 2025-06-03 07:33:40,105 | INFO     | pid: 921314
[2025-06-03 03:34:00] 2025-06-03 07:33:40,105 | INFO     | pgrp: 921314
[2025-06-03 03:34:00] 2025-06-03 07:33:40,105 | INFO     | corecount: 8
[2025-06-03 03:34:00] 2025-06-03 07:33:40,106 | INFO     | event service: False
[2025-06-03 03:34:00] 2025-06-03 07:33:40,106 | INFO     | sizes: {0: 2405011, 1: 2405210, 5: 2405416, 12: 2405472, 5475: 2431992, 5476: 2431991, 5478: 2441116, 5481: 2441172, 5484: 2441342}
[2025-06-03 03:34:00] 2025-06-03 07:33:40,106 | INFO     | --------------------------------------------------
[2025-06-03 03:34:00] 2025-06-03 07:33:40,106 | INFO     | 
[2025-06-03 03:34:00] 2025-06-03 07:33:40,106 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-03 03:34:00] 2025-06-03 07:33:40,120 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 03:34:00] 2025-06-03 07:33:40,120 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 03:34:00] 2025-06-03 07:33:40,120 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 03:34:00] 2025-06-03 07:33:40,120 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 03:34:00] 2025-06-03 07:33:40,120 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 03:34:00] 2025-06-03 07:33:40,120 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 03:34:00] 2025-06-03 07:33:40,120 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 03:34:00] 2025-06-03 07:33:40,120 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 03:34:00] 2025-06-03 07:33:40,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 03:34:00] 2025-06-03 07:33:40,120 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 03:34:00] 2025-06-03 07:33:40,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 03:34:00] 2025-06-03 07:33:40,121 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 03:34:00] 2025-06-03 07:33:40,121 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 03:34:00] 2025-06-03 07:33:40,121 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 03:34:00] 2025-06-03 07:33:40,121 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 03:34:00] 2025-06-03 07:33:40,121 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 03:34:00] 2025-06-03 07:33:40,121 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 03:34:00] 2025-06-03 07:33:40,121 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 03:34:00] 2025-06-03 07:33:40,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 03:34:00] 2025-06-03 07:33:40,121 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 03:34:00] 2025-06-03 07:33:40,121 | INFO     | job 6677443239 has completed (purged errors)
[2025-06-03 03:34:00] 2025-06-03 07:33:40,121 | INFO     | overall cleanup function is called
[2025-06-03 03:34:00] 2025-06-03 07:33:41,129 | INFO     | --- collectZombieJob: --- 10, [921314]
[2025-06-03 03:34:00] 2025-06-03 07:33:41,129 | INFO     | zombie collector waiting for pid 921314
[2025-06-03 03:34:00] 2025-06-03 07:33:41,129 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 03:34:00] 2025-06-03 07:33:41,129 | INFO     | collected zombie processes
[2025-06-03 03:34:00] 2025-06-03 07:33:41,129 | INFO     | will attempt to kill all subprocesses of pid=921314
[2025-06-03 03:34:00] 2025-06-03 07:33:41,495 | INFO     | process IDs to be killed: [921314] (in reverse order)
[2025-06-03 03:34:00] 2025-06-03 07:33:41,567 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 03:34:00] 2025-06-03 07:33:41,567 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 03:34:00] 2025-06-03 07:33:41,581 | INFO     | did not find any defunct processes belonging to 921314
[2025-06-03 03:34:00] 2025-06-03 07:33:41,595 | INFO     | did not find any defunct processes belonging to 921314
[2025-06-03 03:34:00] 2025-06-03 07:33:41,596 | INFO     | ready for new job
[2025-06-03 03:34:00] 2025-06-03 07:33:41,596 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 03:34:00] 2025-06-03 07:33:41,597 | INFO     | **************************************
[2025-06-03 03:34:00] 2025-06-03 07:33:41,597 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 03:34:00] 2025-06-03 07:33:41,598 | INFO     | **************************************
[2025-06-03 03:34:00] 2025-06-03 07:33:41,598 | INFO     | 
[2025-06-03 03:34:00] 2025-06-03 07:33:41,616 | INFO     | architecture information:
[2025-06-03 03:34:00] 2025-06-03 07:33:41,616 | INFO     | executing command: cat /etc/os-release
[2025-06-03 03:34:00] 2025-06-03 07:33:41,629 | INFO     | cat /etc/os-release:
[2025-06-03 03:34:00] NAME="CentOS Linux"
[2025-06-03 03:34:00] VERSION="7 (Core)"
[2025-06-03 03:34:00] ID="centos"
[2025-06-03 03:34:00] ID_LIKE="rhel fedora"
[2025-06-03 03:34:00] VERSION_ID="7"
[2025-06-03 03:34:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 03:34:00] ANSI_COLOR="0;31"
[2025-06-03 03:34:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 03:34:00] HOME_URL="https://www.centos.org/"
[2025-06-03 03:34:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 03:34:00] 
[2025-06-03 03:34:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 03:34:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 03:34:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 03:34:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 03:34:00] 
[2025-06-03 03:34:00] 2025-06-03 07:33:41,629 | INFO     | **************************************
[2025-06-03 03:34:00] 2025-06-03 07:33:42,132 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-03 03:34:00] 2025-06-03 07:33:42,147 | INFO     | sufficient remaining disk space (89996132352 B)
[2025-06-03 03:34:00] 2025-06-03 07:33:42,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 03:34:00] 2025-06-03 07:33:42,149 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 03:34:00] 2025-06-03 07:33:42,149 | INFO     | update_server=False
[2025-06-03 03:34:00] 2025-06-03 07:33:42,149 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 03:34:00] 2025-06-03 07:33:42,150 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 03:34:00] 2025-06-03 07:33:42,226 | INFO     | all data control threads have been joined
[2025-06-03 03:34:00] 2025-06-03 07:33:42,361 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 03:34:00] 2025-06-03 07:33:42,361 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 03:34:00] 2025-06-03 07:33:42,361 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:34:00] 2025-06-03 07:33:42,361 | INFO     | will abort loop
[2025-06-03 03:34:00] 2025-06-03 07:33:42,569 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 03:34:00] 2025-06-03 07:33:42,576 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 03:34:00] 2025-06-03 07:33:42,576 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 03:34:00] 2025-06-03 07:33:42,577 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 03:34:00] 2025-06-03 07:33:42,909 | INFO     | all job control threads have been joined
[2025-06-03 03:34:00] 2025-06-03 07:33:43,155 | INFO     | [job] retrieve thread has finished
[2025-06-03 03:34:00] 2025-06-03 07:33:43,182 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 03:34:00] 2025-06-03 07:33:43,231 | INFO     | [data] control thread has finished
[2025-06-03 03:34:00] 2025-06-03 07:33:43,366 | INFO     | [job] job monitor thread has finished
[2025-06-03 03:34:00] 2025-06-03 07:33:43,588 | INFO     | all payload control threads have been joined
[2025-06-03 03:34:00] 2025-06-03 07:33:43,610 | INFO     | [payload] failed_post thread has finished
[2025-06-03 03:34:00] 2025-06-03 07:33:43,612 | INFO     | [payload] validate_post thread has finished
[2025-06-03 03:34:00] 2025-06-03 07:33:43,915 | INFO     | [job] control thread has finished
[2025-06-03 03:34:00] 2025-06-03 07:33:44,155 | INFO     | [data] copytool_out thread has finished
[2025-06-03 03:34:00] 2025-06-03 07:33:44,181 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 03:34:00] 2025-06-03 07:33:44,182 | INFO     | [job] validate thread has finished
[2025-06-03 03:34:00] 2025-06-03 07:33:44,389 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 03:34:00] 2025-06-03 07:33:44,540 | INFO     | [data] copytool_in thread has finished
[2025-06-03 03:34:00] 2025-06-03 07:33:44,593 | INFO     | [payload] control thread has finished
[2025-06-03 03:34:00] 2025-06-03 07:33:45,114 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:34:00] 2025-06-03 07:33:46,114 | INFO     | [job] queue monitor thread has finished
[2025-06-03 03:34:00] 2025-06-03 07:33:46,572 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 03:34:00] 2025-06-03 07:33:52,298 | INFO     | job.realtimelogging is not enabled
[2025-06-03 03:34:00] 2025-06-03 07:33:53,303 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 03:34:00] 2025-06-03 07:33:55,071 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139925727565632)>', '<ExcThread(monitor, started 139925353633536)>']
[2025-06-03 03:34:00] 2025-06-03 07:33:55,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 03:34:00] 2025-06-03 07:33:55,639 | INFO     | [monitor] control thread has ended
[2025-06-03 03:34:00] 2025-06-03 07:34:00,093 | INFO     | all workflow threads have been joined
[2025-06-03 03:34:00] 2025-06-03 07:34:00,095 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 03:34:00] 2025-06-03 07:34:00,095 | INFO     | traces error code: 0
[2025-06-03 03:34:00] 2025-06-03 07:34:00,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 03:34:00] 2025-06-03 07:34:00,240 [wrapper] ==== pilot stdout END ====
[2025-06-03 03:34:00] 2025-06-03 07:34:00,243 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 03:34:00] 2025-06-03 07:34:00,245 [wrapper] pilotpid: 906548
[2025-06-03 03:34:00] 2025-06-03 07:34:00,247 [wrapper] Pilot exit status: 0
[2025-06-03 03:34:00] 2025-06-03 07:34:00,254 [wrapper] pandaids: 6677443239
[2025-06-03 03:34:00] 2025-06-03 07:34:00,319 [wrapper] cleanup supervisor_pilot 1298134 906549
[2025-06-03 03:34:00] 2025-06-03 07:34:00,323 [wrapper] Test setup, not cleaning
[2025-06-03 03:34:00] 2025-06-03 07:34:00,326 [wrapper] apfmon messages muted
[2025-06-03 03:34:00] 2025-06-03 07:34:00,328 [wrapper] ==== wrapper stdout END ====
[2025-06-03 03:34:00] 2025-06-03 07:34:00,331 [wrapper] ==== wrapper stderr END ====
[2025-06-03 03:34:00]  *** Error codes and diagnostics ***
[2025-06-03 03:34:00]     "exeErrorCode": 0,
[2025-06-03 03:34:00]     "exeErrorDiag": "",
[2025-06-03 03:34:00]     "pilotErrorCode": 0,
[2025-06-03 03:34:00]     "pilotErrorDiag": "",
[2025-06-03 03:34:00]  *** Listing of results directory ***
[2025-06-03 03:34:00] total 390144
[2025-06-03 03:34:00] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 21:51 pilot3.tar.gz
[2025-06-03 03:34:00] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 22:09 queuedata.json
[2025-06-03 03:34:00] -rwx------. 1 boincer umatlas     37140 Jun  2 22:09 runpilot2-wrapper.sh
[2025-06-03 03:34:00] -rw-r--r--. 1 boincer umatlas       100 Jun  3 02:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 03:34:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 02:01 run_atlas
[2025-06-03 03:34:00] -rw-r--r--. 1 boincer umatlas       105 Jun  3 02:01 job.xml
[2025-06-03 03:34:00] -rw-r--r--. 2 boincer umatlas 214968371 Jun  3 02:01 EVNT.45006593._000673.pool.root.1
[2025-06-03 03:34:00] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 02:01 start_atlas.sh
[2025-06-03 03:34:00] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 02:01 shared
[2025-06-03 03:34:00] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 02:01 input.tar.gz
[2025-06-03 03:34:00] -rw-r--r--. 1 boincer umatlas         0 Jun  3 02:01 boinc_lockfile
[2025-06-03 03:34:00] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 02:01 pandaJob.out
[2025-06-03 03:34:00] -rw-------. 1 boincer umatlas    986901 Jun  3 02:01 agis_schedconf.cvmfs.json
[2025-06-03 03:34:00] -rw-------. 1 boincer umatlas   1603667 Jun  3 02:01 agis_ddmendpoints.agis.ALL.json
[2025-06-03 03:34:00] drwx------. 4 boincer umatlas      4096 Jun  3 02:02 pilot3
[2025-06-03 03:34:00] -rw-r--r--. 1 boincer umatlas      6860 Jun  3 03:30 init_data.xml
[2025-06-03 03:34:00] -rw-------. 1 boincer umatlas        95 Jun  3 03:32 pilot_heartbeat.json
[2025-06-03 03:34:00] -rw-------. 1 boincer umatlas 179026569 Jun  3 03:33 HITS.45006595._016815.pool.root.1
[2025-06-03 03:34:00] -rw-r--r--. 1 boincer umatlas       529 Jun  3 03:33 boinc_task_state.xml
[2025-06-03 03:34:00] -rw-------. 1 boincer umatlas      1038 Jun  3 03:33 memory_monitor_summary.json
[2025-06-03 03:34:00] -rw-------. 1 boincer umatlas    310952 Jun  3 03:33 log.45006595._016815.job.log.tgz.1
[2025-06-03 03:34:00] -rw-------. 1 boincer umatlas      7718 Jun  3 03:33 heartbeat.json
[2025-06-03 03:34:00] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 03:33 boinc_mmap_file
[2025-06-03 03:34:00] -rw-r--r--. 1 boincer umatlas        27 Jun  3 03:33 wrapper_checkpoint.txt
[2025-06-03 03:34:00] -rw-------. 1 boincer umatlas      4611 Jun  3 03:34 pilotlog.txt
[2025-06-03 03:34:00] -rw-------. 1 boincer umatlas    526024 Jun  3 03:34 log.45006595._016815.job.log.1
[2025-06-03 03:34:00] -rw-------. 1 boincer umatlas       357 Jun  3 03:34 output.list
[2025-06-03 03:34:00] -rw-r--r--. 1 boincer umatlas       620 Jun  3 03:34 runtime_log
[2025-06-03 03:34:00] -rw-------. 1 boincer umatlas    860160 Jun  3 03:34 result.tar.gz
[2025-06-03 03:34:00] -rw-r--r--. 1 boincer umatlas      8669 Jun  3 03:34 runtime_log.err
[2025-06-03 03:34:00] -rw-------. 1 boincer umatlas       654 Jun  3 03:34 76oMDmhGWg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmDAXKDmaqcSfn.diag
[2025-06-03 03:34:00] -rw-r--r--. 1 boincer umatlas     21413 Jun  3 03:34 stderr.txt
[2025-06-03 03:34:00] HITS file was successfully produced:
[2025-06-03 03:34:00] -rw-------. 1 boincer umatlas 179026569 Jun  3 03:33 shared/HITS.pool.root.1
[2025-06-03 03:34:00]  *** Contents of shared directory: ***
[2025-06-03 03:34:00] total 386128
[2025-06-03 03:34:00] -rw-r--r--. 2 boincer umatlas 214968371 Jun  3 02:01 ATLAS.root_0
[2025-06-03 03:34:00] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 02:01 start_atlas.sh
[2025-06-03 03:34:00] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 02:01 input.tar.gz
[2025-06-03 03:34:00] -rw-------. 1 boincer umatlas 179026569 Jun  3 03:33 HITS.pool.root.1
[2025-06-03 03:34:00] -rw-------. 1 boincer umatlas    860160 Jun  3 03:34 result.tar.gz
03:34:02 (902932): run_atlas exited; CPU time 37489.001186
03:34:02 (902932): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN