Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
18:16:00 (320742): wrapper (7.7.26015): starting
18:16:00 (320742): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 18:16:00] Arguments: --nthreads 12
[2025-06-03 18:16:00] Threads: 12
[2025-06-03 18:16:00] Checking for CVMFS
[2025-06-03 18:16:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 18:16:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 18:16:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 18:16:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 18:16:08] 2.12.7.0 20828 744 44832 146752 3 10 2253386 4096000 912 130560 1 836637 99.992 231375 231 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-03 18:16:08] CVMFS is ok
[2025-06-03 18:16:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 18:16:08] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-03 18:16:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-03 18:16:08] Further information can be found at the LHC@home message board.
[2025-06-03 18:16:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 18:16:08] Checking for apptainer binary...
[2025-06-03 18:16:08] apptainer is not installed, using version from CVMFS
[2025-06-03 18:16:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 18:16:12] martinpcalt
[2025-06-03 18:16:12] apptainer works
[2025-06-03 18:16:12] Set ATHENA_PROC_NUMBER=12
[2025-06-03 18:16:12] Set ATHENA_CORE_NUMBER=12
[2025-06-03 18:16:12] Starting ATLAS job with PandaID=6677382145
[2025-06-03 18:16:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:25:58]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:25:58] 2025-06-03 20:25:32,319 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 20:25:58] 2025-06-03 20:25:34,831 | INFO     | monitor loop #605: job 0:6677382145 is in state 'finished'
[2025-06-03 20:25:58] 2025-06-03 20:25:34,831 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 20:25:58] 2025-06-03 20:25:37,343 | INFO     | monitor loop #606: job 0:6677382145 is in state 'finished'
[2025-06-03 20:25:58] 2025-06-03 20:25:37,343 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 20:25:58] 2025-06-03 20:25:39,331 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 20:25:58] 2025-06-03 20:25:39,331 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6677382145/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:25:58] 2025-06-03 20:25:39,332 | INFO     | extracted standard info from prmon json
[2025-06-03 20:25:58] 2025-06-03 20:25:39,332 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:25:58] 2025-06-03 20:25:39,332 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:25:58] 2025-06-03 20:25:39,332 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:25:58] 2025-06-03 20:25:39,332 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:25:58] 2025-06-03 20:25:39,334 | INFO     | fitting pss+swap vs Time
[2025-06-03 20:25:58] 2025-06-03 20:25:39,334 | INFO     | sum of square deviations: 563026370.5
[2025-06-03 20:25:58] 2025-06-03 20:25:39,334 | INFO     | sum of deviations: -3282752728.5
[2025-06-03 20:25:58] 2025-06-03 20:25:39,334 | INFO     | mean x: 1748978520.5
[2025-06-03 20:25:58] 2025-06-03 20:25:39,334 | INFO     | mean y: 2727978.3852459015
[2025-06-03 20:25:58] 2025-06-03 20:25:39,334 | INFO     | -- intersect: 10200232591.109718
[2025-06-03 20:25:58] 2025-06-03 20:25:39,335 | INFO     | intersect: 10200232591.109718
[2025-06-03 20:25:58] 2025-06-03 20:25:39,335 | INFO     | chi2: 4.01091669264742
[2025-06-03 20:25:58] 2025-06-03 20:25:39,335 | INFO     | sum of square deviations: 496597218.0
[2025-06-03 20:25:58] 2025-06-03 20:25:39,335 | INFO     | sum of deviations: 6569286237.000002
[2025-06-03 20:25:58] 2025-06-03 20:25:39,335 | INFO     | mean x: 1748978368.0
[2025-06-03 20:25:58] 2025-06-03 20:25:39,335 | INFO     | mean y: 2749963.170940171
[2025-06-03 20:25:58] 2025-06-03 20:25:39,335 | INFO     | -- intersect: -23133786258.248497
[2025-06-03 20:25:58] 2025-06-03 20:25:39,336 | INFO     | intersect: -23133786258.248497
[2025-06-03 20:25:58] 2025-06-03 20:25:39,336 | INFO     | chi2: 3.3201553824348236
[2025-06-03 20:25:58] 2025-06-03 20:25:39,336 | INFO     | current chi2=3.3201553824348236 (change=17.222030850923936 %)
[2025-06-03 20:25:58] 2025-06-03 20:25:39,336 | INFO     | right removable region: 116
[2025-06-03 20:25:58] 2025-06-03 20:25:39,336 | INFO     | sum of square deviations: 496597218.0
[2025-06-03 20:25:58] 2025-06-03 20:25:39,336 | INFO     | sum of deviations: -36642150756.0
[2025-06-03 20:25:58] 2025-06-03 20:25:39,336 | INFO     | mean x: 1748978673.0
[2025-06-03 20:25:58] 2025-06-03 20:25:39,336 | INFO     | mean y: 2803878.829059829
[2025-06-03 20:25:58] 2025-06-03 20:25:39,336 | INFO     | -- intersect: 129053748753.6246
[2025-06-03 20:25:58] 2025-06-03 20:25:39,337 | INFO     | intersect: 129053748753.6246
[2025-06-03 20:25:58] 2025-06-03 20:25:39,337 | INFO     | chi2: 1.135260397210176
[2025-06-03 20:25:58] 2025-06-03 20:25:39,337 | INFO     | current chi2=1.135260397210176 (change=71.69573730386199 %)
[2025-06-03 20:25:58] 2025-06-03 20:25:39,337 | INFO     | sum of square deviations: 435610028.0
[2025-06-03 20:25:58] 2025-06-03 20:25:39,337 | INFO     | sum of deviations: -42742977001.0
[2025-06-03 20:25:58] 2025-06-03 20:25:39,337 | INFO     | mean x: 1748978825.5
[2025-06-03 20:25:58] 2025-06-03 20:25:39,337 | INFO     | mean y: 2819034.660714286
[2025-06-03 20:25:58] 2025-06-03 20:25:39,337 | INFO     | -- intersect: 171616319432.73346
[2025-06-03 20:25:58] 2025-06-03 20:25:39,337 | INFO     | intersect: 171616319432.73346
[2025-06-03 20:25:58] 2025-06-03 20:25:39,338 | INFO     | chi2: 0.9270545214268253
[2025-06-03 20:25:58] 2025-06-03 20:25:39,338 | INFO     | current chi2=0.9270545214268253 (change=18.33992239093359 %)
[2025-06-03 20:25:58] 2025-06-03 20:25:39,338 | INFO     | left removable region: 20
[2025-06-03 20:25:58] 2025-06-03 20:25:39,338 | INFO     | sum of square deviations: 274312120.0
[2025-06-03 20:25:58] 2025-06-03 20:25:39,338 | INFO     | sum of deviations: -26484781933.0
[2025-06-03 20:25:58] 2025-06-03 20:25:39,338 | INFO     | mean x: 1748978947.5
[2025-06-03 20:25:58] 2025-06-03 20:25:39,338 | INFO     | mean y: 2832251.875
[2025-06-03 20:25:58] 2025-06-03 20:25:39,338 | INFO     | -- intersect: 168866410098.6918
[2025-06-03 20:25:58] 2025-06-03 20:25:39,338 | INFO     | intersect: 168866410098.6918
[2025-06-03 20:25:58] 2025-06-03 20:25:39,339 | INFO     | chi2: 0.1476594199162925
[2025-06-03 20:25:58] 2025-06-03 20:25:39,339 | INFO     | -- intersect: 168866410098.6918
[2025-06-03 20:25:58] 2025-06-03 20:25:39,339 | INFO     | current memory leak: -96.55 B/s (using 96 data points, chi2=0.15)
[2025-06-03 20:25:58] 2025-06-03 20:25:39,351 | INFO     | ..............................
[2025-06-03 20:25:58] 2025-06-03 20:25:39,351 | INFO     | . Timing measurements:
[2025-06-03 20:25:58] 2025-06-03 20:25:39,351 | INFO     | . get job = 0 s
[2025-06-03 20:25:58] 2025-06-03 20:25:39,351 | INFO     | . initial setup = 20 s
[2025-06-03 20:25:58] 2025-06-03 20:25:39,351 | INFO     | . payload setup = 63 s
[2025-06-03 20:25:58] 2025-06-03 20:25:39,351 | INFO     | . stage-in = 0 s
[2025-06-03 20:25:58] 2025-06-03 20:25:39,351 | INFO     | . payload execution = 7429 s
[2025-06-03 20:25:58] 2025-06-03 20:25:39,351 | INFO     | . stage-out = 15 s
[2025-06-03 20:25:58] 2025-06-03 20:25:39,352 | INFO     | . log creation = 0 s
[2025-06-03 20:25:58] 2025-06-03 20:25:39,352 | INFO     | ..............................
[2025-06-03 20:25:58] 2025-06-03 20:25:39,534 | INFO     | 
[2025-06-03 20:25:58] 2025-06-03 20:25:39,535 | INFO     | job summary report
[2025-06-03 20:25:58] 2025-06-03 20:25:39,535 | INFO     | --------------------------------------------------
[2025-06-03 20:25:58] 2025-06-03 20:25:39,535 | INFO     | PanDA job id: 6677382145
[2025-06-03 20:25:58] 2025-06-03 20:25:39,535 | INFO     | task id: 45006595
[2025-06-03 20:25:58] 2025-06-03 20:25:39,535 | INFO     | errors: (none)
[2025-06-03 20:25:58] 2025-06-03 20:25:39,535 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:25:58] 2025-06-03 20:25:39,535 | INFO     | pilot state: finished 
[2025-06-03 20:25:58] 2025-06-03 20:25:39,535 | INFO     | transexitcode: 0
[2025-06-03 20:25:58] 2025-06-03 20:25:39,535 | INFO     | exeerrorcode: 0
[2025-06-03 20:25:58] 2025-06-03 20:25:39,535 | INFO     | exeerrordiag: 
[2025-06-03 20:25:58] 2025-06-03 20:25:39,535 | INFO     | exitcode: 0
[2025-06-03 20:25:58] 2025-06-03 20:25:39,535 | INFO     | exitmsg: OK
[2025-06-03 20:25:58] 2025-06-03 20:25:39,535 | INFO     | cpuconsumptiontime: 27704 s
[2025-06-03 20:25:58] 2025-06-03 20:25:39,536 | INFO     | nevents: 400
[2025-06-03 20:25:58] 2025-06-03 20:25:39,536 | INFO     | neventsw: 0
[2025-06-03 20:25:58] 2025-06-03 20:25:39,536 | INFO     | pid: 330821
[2025-06-03 20:25:58] 2025-06-03 20:25:39,536 | INFO     | pgrp: 330821
[2025-06-03 20:25:58] 2025-06-03 20:25:39,536 | INFO     | corecount: 12
[2025-06-03 20:25:58] 2025-06-03 20:25:39,536 | INFO     | event service: False
[2025-06-03 20:25:58] 2025-06-03 20:25:39,536 | INFO     | sizes: {0: 2405030, 1: 2405229, 12: 2405229, 23: 2405257, 34: 2405285, 35: 2405519, 44: 2405675, 7498: 2432844, 7515: 2441831, 7518: 2441887, 7601: 2442057}
[2025-06-03 20:25:58] 2025-06-03 20:25:39,536 | INFO     | --------------------------------------------------
[2025-06-03 20:25:58] 2025-06-03 20:25:39,536 | INFO     | 
[2025-06-03 20:25:58] 2025-06-03 20:25:39,536 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-03 20:25:58] 2025-06-03 20:25:39,663 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:25:58] 2025-06-03 20:25:39,663 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:25:58] 2025-06-03 20:25:39,663 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:25:58] 2025-06-03 20:25:39,663 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:25:58] 2025-06-03 20:25:39,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:25:58] 2025-06-03 20:25:39,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:25:58] 2025-06-03 20:25:39,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:25:58] 2025-06-03 20:25:39,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:25:58] 2025-06-03 20:25:39,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:25:58] 2025-06-03 20:25:39,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:25:58] 2025-06-03 20:25:39,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:25:58] 2025-06-03 20:25:39,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:25:58] 2025-06-03 20:25:39,664 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:25:58] 2025-06-03 20:25:39,664 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:25:58] 2025-06-03 20:25:39,664 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:25:58] 2025-06-03 20:25:39,664 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:25:58] 2025-06-03 20:25:39,664 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:25:58] 2025-06-03 20:25:39,664 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:25:58] 2025-06-03 20:25:39,664 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:25:58] 2025-06-03 20:25:39,664 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:25:58] 2025-06-03 20:25:39,665 | INFO     | job 6677382145 has completed (purged errors)
[2025-06-03 20:25:58] 2025-06-03 20:25:39,665 | INFO     | overall cleanup function is called
[2025-06-03 20:25:58] 2025-06-03 20:25:40,675 | INFO     | --- collectZombieJob: --- 10, [330821]
[2025-06-03 20:25:58] 2025-06-03 20:25:40,675 | INFO     | zombie collector waiting for pid 330821
[2025-06-03 20:25:58] 2025-06-03 20:25:40,675 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:25:58] 2025-06-03 20:25:40,675 | INFO     | collected zombie processes
[2025-06-03 20:25:58] 2025-06-03 20:25:40,675 | INFO     | will attempt to kill all subprocesses of pid=330821
[2025-06-03 20:25:58] 2025-06-03 20:25:40,866 | INFO     | PID=324352 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-03 20:25:58] 2025-06-03 20:25:40,871 | INFO     | .. there are 2 such processes running
[2025-06-03 20:25:58] 2025-06-03 20:25:40,869 | INFO     | process IDs to be killed: [330821] (in reverse order)
[2025-06-03 20:25:58] 2025-06-03 20:25:41,003 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:25:58] 2025-06-03 20:25:41,004 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:25:58] 2025-06-03 20:25:41,005 | INFO     | did not find any defunct processes belonging to 330821
[2025-06-03 20:25:58] 2025-06-03 20:25:41,006 | INFO     | did not find any defunct processes belonging to 330821
[2025-06-03 20:25:58] 2025-06-03 20:25:41,007 | INFO     | ready for new job
[2025-06-03 20:25:58] 2025-06-03 20:25:41,007 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:25:58] 2025-06-03 20:25:41,012 | INFO     | **************************************
[2025-06-03 20:25:58] 2025-06-03 20:25:41,012 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:25:58] 2025-06-03 20:25:41,012 | INFO     | **************************************
[2025-06-03 20:25:58] 2025-06-03 20:25:41,012 | INFO     | 
[2025-06-03 20:25:58] 2025-06-03 20:25:41,035 | INFO     | architecture information:
[2025-06-03 20:25:58] 2025-06-03 20:25:41,047 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:25:58] 2025-06-03 20:25:41,075 | INFO     | cat /etc/os-release:
[2025-06-03 20:25:58] NAME="CentOS Linux"
[2025-06-03 20:25:58] VERSION="7 (Core)"
[2025-06-03 20:25:58] ID="centos"
[2025-06-03 20:25:58] ID_LIKE="rhel fedora"
[2025-06-03 20:25:58] VERSION_ID="7"
[2025-06-03 20:25:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:25:58] ANSI_COLOR="0;31"
[2025-06-03 20:25:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:25:58] HOME_URL="https://www.centos.org/"
[2025-06-03 20:25:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:25:58] 
[2025-06-03 20:25:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:25:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:25:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:25:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:25:58] 
[2025-06-03 20:25:58] 2025-06-03 20:25:41,075 | INFO     | **************************************
[2025-06-03 20:25:58] 2025-06-03 20:25:41,579 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-03 20:25:58] 2025-06-03 20:25:41,619 | INFO     | sufficient remaining disk space (272274292736 B)
[2025-06-03 20:25:58] 2025-06-03 20:25:41,619 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:25:58] 2025-06-03 20:25:41,619 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:25:58] 2025-06-03 20:25:41,620 | INFO     | update_server=False
[2025-06-03 20:25:58] 2025-06-03 20:25:41,620 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:25:58] 2025-06-03 20:25:41,620 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:25:58] 2025-06-03 20:25:41,620 | INFO     | aborting loop
[2025-06-03 20:25:58] 2025-06-03 20:25:41,620 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 20:25:58] 2025-06-03 20:25:41,620 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:25:58] 2025-06-03 20:25:41,620 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:25:58] 2025-06-03 20:25:41,620 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:25:58] 2025-06-03 20:25:41,623 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:25:58] 2025-06-03 20:25:41,739 | INFO     | all payload control threads have been joined
[2025-06-03 20:25:58] 2025-06-03 20:25:41,875 | INFO     | all job control threads have been joined
[2025-06-03 20:25:58] 2025-06-03 20:25:42,487 | INFO     | all data control threads have been joined
[2025-06-03 20:25:58] 2025-06-03 20:25:42,623 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:25:58] 2025-06-03 20:25:42,639 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:25:58] 2025-06-03 20:25:42,639 | INFO     | [job] validate thread has finished
[2025-06-03 20:25:58] 2025-06-03 20:25:42,744 | INFO     | [payload] control thread has finished
[2025-06-03 20:25:58] 2025-06-03 20:25:42,879 | INFO     | [job] control thread has finished
[2025-06-03 20:25:58] 2025-06-03 20:25:42,971 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:25:58] 2025-06-03 20:25:43,119 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:25:58] 2025-06-03 20:25:43,147 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:25:58] 2025-06-03 20:25:43,491 | INFO     | [data] control thread has finished
[2025-06-03 20:25:58] 2025-06-03 20:25:43,639 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:25:58] 2025-06-03 20:25:43,667 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:25:58] 2025-06-03 20:25:44,015 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:25:58] 2025-06-03 20:25:44,027 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:25:58] 2025-06-03 20:25:44,051 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:25:58] 2025-06-03 20:25:44,071 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:25:58] 2025-06-03 20:25:44,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:25:58] 2025-06-03 20:25:45,559 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:25:58] 2025-06-03 20:25:47,683 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:25:58] 2025-06-03 20:25:49,163 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139724654733120)>', '<ExcThread(monitor, started 139724069005056)>']
[2025-06-03 20:25:58] 2025-06-03 20:25:49,691 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:25:58] 2025-06-03 20:25:49,691 | INFO     | [monitor] control thread has ended
[2025-06-03 20:25:58] 2025-06-03 20:25:54,219 | INFO     | all workflow threads have been joined
[2025-06-03 20:25:58] 2025-06-03 20:25:54,219 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:25:58] 2025-06-03 20:25:54,251 | INFO     | traces error code: 0
[2025-06-03 20:25:58] 2025-06-03 20:25:54,251 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:25:58] 2025-06-03 20:25:55,988 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:25:58] 2025-06-03 20:25:56,007 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:25:58] 2025-06-03 20:25:56,032 [wrapper] pilotpid: 324352
[2025-06-03 20:25:58] 2025-06-03 20:25:56,059 [wrapper] Pilot exit status: 0
[2025-06-03 20:25:58] 2025-06-03 20:25:56,280 [wrapper] pandaids: 6677382145
[2025-06-03 20:25:58] 2025-06-03 20:25:56,356 [wrapper] cleanup supervisor_pilot  371898 324353
[2025-06-03 20:25:58] 2025-06-03 20:25:56,371 [wrapper] Test setup, not cleaning
[2025-06-03 20:25:58] 2025-06-03 20:25:56,396 [wrapper] apfmon messages muted
[2025-06-03 20:25:58] 2025-06-03 20:25:56,419 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:25:58] 2025-06-03 20:25:56,443 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:25:58]  *** Error codes and diagnostics ***
[2025-06-03 20:25:58]     "exeErrorCode": 0,
[2025-06-03 20:25:58]     "exeErrorDiag": "",
[2025-06-03 20:25:58]     "pilotErrorCode": 0,
[2025-06-03 20:25:58]     "pilotErrorDiag": "",
[2025-06-03 20:25:58]  *** Listing of results directory ***
[2025-06-03 20:25:58] total 388156
[2025-06-03 20:25:58] -rw-r--r-- 1 boinc boinc    495897 Jun  2 15:59 pilot3.tar.gz
[2025-06-03 20:25:58] -rwx------ 1 boinc boinc     37140 Jun  2 16:02 runpilot2-wrapper.sh
[2025-06-03 20:25:58] -rw-r--r-- 1 boinc boinc      5111 Jun  2 16:02 queuedata.json
[2025-06-03 20:25:58] -rw-rw-r-- 1 boinc boinc       100 Jun  3 18:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:25:58] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 18:15 run_atlas
[2025-06-03 20:25:58] -rw-rw-r-- 1 boinc boinc       105 Jun  3 18:15 job.xml
[2025-06-03 20:25:58] -rw-rw-r-- 1 boinc boinc      9334 Jun  3 18:16 init_data.xml
[2025-06-03 20:25:58] -rw-r--r-- 2 boinc boinc 215127517 Jun  3 18:16 EVNT.45006593._000116.pool.root.1
[2025-06-03 20:25:58] -rw-r--r-- 2 boinc boinc     15093 Jun  3 18:16 start_atlas.sh
[2025-06-03 20:25:58] drwxrwx--x 2 boinc boinc      4096 Jun  3 18:16 shared
[2025-06-03 20:25:58] -rw-r--r-- 2 boinc boinc    508870 Jun  3 18:16 input.tar.gz
[2025-06-03 20:25:58] -rw-rw-r-- 1 boinc boinc         0 Jun  3 18:16 boinc_lockfile
[2025-06-03 20:25:58] -rw-rw-r-- 1 boinc boinc      2522 Jun  3 18:16 pandaJob.out
[2025-06-03 20:25:58] -rw------- 1 boinc boinc    986893 Jun  3 18:17 agis_schedconf.cvmfs.json
[2025-06-03 20:25:58] -rw------- 1 boinc boinc   1603667 Jun  3 18:17 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:25:58] drwx------ 4 boinc boinc      4096 Jun  3 18:17 pilot3
[2025-06-03 20:25:58] -rw------- 1 boinc boinc 176250080 Jun  3 20:22 HITS.45006595._002895.pool.root.1
[2025-06-03 20:25:58] -rw-rw-r-- 1 boinc boinc       529 Jun  3 20:23 boinc_task_state.xml
[2025-06-03 20:25:58] -rw------- 1 boinc boinc      1040 Jun  3 20:23 memory_monitor_summary.json
[2025-06-03 20:25:58] -rw------- 1 boinc boinc    395403 Jun  3 20:24 log.45006595._002895.job.log.tgz.1
[2025-06-03 20:25:58] -rw------- 1 boinc boinc        95 Jun  3 20:24 pilot_heartbeat.json
[2025-06-03 20:25:58] -rw------- 1 boinc boinc      7715 Jun  3 20:25 heartbeat.json
[2025-06-03 20:25:58] -rw------- 1 boinc boinc      4500 Jun  3 20:25 pilotlog.txt
[2025-06-03 20:25:58] -rw-rw-r-- 1 boinc boinc      8192 Jun  3 20:25 boinc_mmap_file
[2025-06-03 20:25:58] -rw-rw-r-- 1 boinc boinc        27 Jun  3 20:25 wrapper_checkpoint.txt
[2025-06-03 20:25:58] -rw------- 1 boinc boinc    733490 Jun  3 20:25 log.45006595._002895.job.log.1
[2025-06-03 20:25:58] -rw------- 1 boinc boinc       357 Jun  3 20:25 output.list
[2025-06-03 20:25:58] -rw-rw-r-- 1 boinc boinc       620 Jun  3 20:25 runtime_log
[2025-06-03 20:25:58] -rw------- 1 boinc boinc   1146880 Jun  3 20:25 result.tar.gz
[2025-06-03 20:25:58] -rw------- 1 boinc boinc       659 Jun  3 20:25 Te2LDmpnMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsGfKDm3hWe3n.diag
[2025-06-03 20:25:58] -rw-rw-r-- 1 boinc boinc      8978 Jun  3 20:25 runtime_log.err
[2025-06-03 20:25:58] -rw-rw-r-- 1 boinc boinc     21364 Jun  3 20:25 stderr.txt
[2025-06-03 20:25:59] HITS file was successfully produced:
[2025-06-03 20:25:59] -rw------- 1 boinc boinc 176250080 Jun  3 20:22 shared/HITS.pool.root.1
[2025-06-03 20:25:59]  *** Contents of shared directory: ***
[2025-06-03 20:25:59] total 383848
[2025-06-03 20:25:59] -rw-r--r-- 2 boinc boinc 215127517 Jun  3 18:16 ATLAS.root_0
[2025-06-03 20:25:59] -rw-r--r-- 2 boinc boinc     15093 Jun  3 18:16 start_atlas.sh
[2025-06-03 20:25:59] -rw-r--r-- 2 boinc boinc    508870 Jun  3 18:16 input.tar.gz
[2025-06-03 20:25:59] -rw------- 1 boinc boinc 176250080 Jun  3 20:22 HITS.pool.root.1
[2025-06-03 20:25:59] -rw------- 1 boinc boinc   1146880 Jun  3 20:25 result.tar.gz
20:26:00 (320742): run_atlas exited; CPU time 27730.711742
20:26:00 (320742): called boinc_finish(0)

</stderr_txt>
]]>

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