Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:50:21 (29171): wrapper (7.7.26015): starting
14:50:21 (29171): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:50:21] Arguments: --nthreads 8
[2025-06-03 14:50:21] Threads: 8
[2025-06-03 14:50:21] Checking for CVMFS
[2025-06-03 14:50:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:50:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:50:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:50:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:50:24] 2.11.2.0 18967 31886 96768 146741 3 60 20084889 25165824 4633 130560 0 16004370 99.825 17450678 2442 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 14:50:24] CVMFS is ok
[2025-06-03 14:50:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:50:24] Checking for apptainer binary...
[2025-06-03 14:50:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:50:24] Running /usr/bin/apptainer --version
[2025-06-03 14:50:24] apptainer version 1.3.2-1.el7
[2025-06-03 14:50:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:20:48] cg-vwn474.simple-grid.lan
[2025-06-03 15:20:48] apptainer works
[2025-06-03 15:20:48] Set ATHENA_PROC_NUMBER=8
[2025-06-03 15:20:48] Set ATHENA_CORE_NUMBER=8
[2025-06-03 15:20:48] Starting ATLAS job with PandaID=6668993106
[2025-06-03 15:20:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:10:46]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:10:46] 2025-06-03 18:05:02,297 | INFO     | mean y: 2526659.4925373136
[2025-06-03 20:10:46] 2025-06-03 18:05:02,297 | INFO     | -- intersect: -14922582750.390062
[2025-06-03 20:10:46] 2025-06-03 18:05:02,298 | INFO     | intersect: -14922582750.390062
[2025-06-03 20:10:46] 2025-06-03 18:05:02,298 | INFO     | chi2: 7.686073079030144
[2025-06-03 20:10:46] 2025-06-03 18:05:02,299 | INFO     | sum of square deviations: 5640782972.0
[2025-06-03 20:10:46] 2025-06-03 18:05:02,301 | INFO     | sum of deviations: 51326343730.999886
[2025-06-03 20:10:46] 2025-06-03 18:05:02,301 | INFO     | mean x: 1748965526.0
[2025-06-03 20:10:46] 2025-06-03 18:05:02,301 | INFO     | mean y: 2526841.7186311786
[2025-06-03 20:10:46] 2025-06-03 18:05:02,301 | INFO     | -- intersect: -15911576963.85941
[2025-06-03 20:10:46] 2025-06-03 18:05:02,302 | INFO     | intersect: -15911576963.85941
[2025-06-03 20:10:46] 2025-06-03 18:05:02,302 | INFO     | chi2: 7.6963181798013265
[2025-06-03 20:10:46] 2025-06-03 18:05:02,302 | INFO     | current chi2=7.6963181798013265 (change=-0.13329434505553198 %)
[2025-06-03 20:10:46] 2025-06-03 18:05:02,302 | INFO     | right removable region: 262
[2025-06-03 20:10:46] 2025-06-03 18:05:02,303 | INFO     | sum of square deviations: 5640782972.0
[2025-06-03 20:10:46] 2025-06-03 18:05:02,305 | INFO     | sum of deviations: -47679171360.0
[2025-06-03 20:10:46] 2025-06-03 18:05:02,305 | INFO     | mean x: 1748965831.0
[2025-06-03 20:10:46] 2025-06-03 18:05:02,305 | INFO     | mean y: 2572505.6958174906
[2025-06-03 20:10:46] 2025-06-03 18:05:02,305 | INFO     | -- intersect: 14785846737.830875
[2025-06-03 20:10:46] 2025-06-03 18:05:02,306 | INFO     | intersect: 14785846737.830875
[2025-06-03 20:10:46] 2025-06-03 18:05:02,306 | INFO     | chi2: 2.4478830422479962
[2025-06-03 20:10:46] 2025-06-03 18:05:02,306 | INFO     | current chi2=2.4478830422479962 (change=68.15170741836248 %)
[2025-06-03 20:10:46] 2025-06-03 18:05:02,307 | INFO     | sum of square deviations: 5325139844.5
[2025-06-03 20:10:46] 2025-06-03 18:05:02,309 | INFO     | sum of deviations: -108538483369.49998
[2025-06-03 20:10:46] 2025-06-03 18:05:02,309 | INFO     | mean x: 1748965983.5
[2025-06-03 20:10:46] 2025-06-03 18:05:02,309 | INFO     | mean y: 2601807.0581395347
[2025-06-03 20:10:46] 2025-06-03 18:05:02,309 | INFO     | -- intersect: 35650513572.2298
[2025-06-03 20:10:46] 2025-06-03 18:05:02,309 | INFO     | intersect: 35650513572.2298
[2025-06-03 20:10:46] 2025-06-03 18:05:02,310 | INFO     | chi2: 0.2980682004125973
[2025-06-03 20:10:46] 2025-06-03 18:05:02,310 | INFO     | current chi2=0.2980682004125973 (change=87.8234296627641 %)
[2025-06-03 20:10:46] 2025-06-03 18:05:02,310 | INFO     | sum of square deviations: 5021496942.0
[2025-06-03 20:10:46] 2025-06-03 18:05:02,313 | INFO     | sum of deviations: -113606767952.0
[2025-06-03 20:10:46] 2025-06-03 18:05:02,313 | INFO     | mean x: 1748966136.0
[2025-06-03 20:10:46] 2025-06-03 18:05:02,313 | INFO     | mean y: 2604313.62055336
[2025-06-03 20:10:46] 2025-06-03 18:05:02,313 | INFO     | -- intersect: 39571360854.438156
[2025-06-03 20:10:46] 2025-06-03 18:05:02,313 | INFO     | intersect: 39571360854.438156
[2025-06-03 20:10:46] 2025-06-03 18:05:02,313 | INFO     | chi2: 0.21711094056951757
[2025-06-03 20:10:46] 2025-06-03 18:05:02,314 | INFO     | current chi2=0.21711094056951757 (change=27.160649720773844 %)
[2025-06-03 20:10:46] 2025-06-03 18:05:02,314 | INFO     | sum of square deviations: 4729621702.0
[2025-06-03 20:10:46] 2025-06-03 18:05:02,316 | INFO     | sum of deviations: -108952873236.00002
[2025-06-03 20:10:46] 2025-06-03 18:05:02,316 | INFO     | mean x: 1748966288.5
[2025-06-03 20:10:46] 2025-06-03 18:05:02,316 | INFO     | mean y: 2601880.129032258
[2025-06-03 20:10:46] 2025-06-03 18:05:02,316 | INFO     | -- intersect: 40292272879.481606
[2025-06-03 20:10:46] 2025-06-03 18:05:02,317 | INFO     | intersect: 40292272879.481606
[2025-06-03 20:10:46] 2025-06-03 18:05:02,317 | INFO     | chi2: 0.21539050317597214
[2025-06-03 20:10:46] 2025-06-03 18:05:02,317 | INFO     | current chi2=0.21539050317597214 (change=0.7924231680966645 %)
[2025-06-03 20:10:46] 2025-06-03 18:05:02,317 | INFO     | left removable region: 40
[2025-06-03 20:10:46] 2025-06-03 18:05:02,318 | INFO     | sum of square deviations: 3392567795.5
[2025-06-03 20:10:46] 2025-06-03 18:05:02,319 | INFO     | sum of deviations: -82530525230.0
[2025-06-03 20:10:46] 2025-06-03 18:05:02,319 | INFO     | mean x: 1748966715.5
[2025-06-03 20:10:46] 2025-06-03 18:05:02,320 | INFO     | mean y: 2590159.6576576577
[2025-06-03 20:10:46] 2025-06-03 18:05:02,320 | INFO     | -- intersect: 42549460359.7061
[2025-06-03 20:10:46] 2025-06-03 18:05:02,320 | INFO     | intersect: 42549460359.7061
[2025-06-03 20:10:46] 2025-06-03 18:05:02,320 | INFO     | chi2: 0.2071303708281048
[2025-06-03 20:10:46] 2025-06-03 18:05:02,320 | INFO     | -- intersect: 42549460359.7061
[2025-06-03 20:10:46] 2025-06-03 18:05:02,320 | INFO     | current memory leak: -24.33 B/s (using 222 data points, chi2=0.21)
[2025-06-03 20:10:46] 2025-06-03 18:05:02,321 | INFO     | ..............................
[2025-06-03 20:10:46] 2025-06-03 18:05:02,321 | INFO     | . Timing measurements:
[2025-06-03 20:10:46] 2025-06-03 18:05:02,321 | INFO     | . get job = 0 s
[2025-06-03 20:10:46] 2025-06-03 18:05:02,321 | INFO     | . initial setup = 5 s
[2025-06-03 20:10:46] 2025-06-03 18:05:02,322 | INFO     | . payload setup = 149 s
[2025-06-03 20:10:46] 2025-06-03 18:05:02,322 | INFO     | . stage-in = 0 s
[2025-06-03 20:10:46] 2025-06-03 18:05:02,322 | INFO     | . payload execution = 16478 s
[2025-06-03 20:10:46] 2025-06-03 18:05:02,322 | INFO     | . stage-out = 2 s
[2025-06-03 20:10:46] 2025-06-03 18:05:02,322 | INFO     | . log creation = 0 s
[2025-06-03 20:10:46] 2025-06-03 18:05:02,322 | INFO     | ..............................
[2025-06-03 20:10:46] 2025-06-03 18:05:02,490 | INFO     | 
[2025-06-03 20:10:46] 2025-06-03 18:05:02,490 | INFO     | job summary report
[2025-06-03 20:10:46] 2025-06-03 18:05:02,491 | INFO     | --------------------------------------------------
[2025-06-03 20:10:46] 2025-06-03 18:05:02,491 | INFO     | PanDA job id: 6668993106
[2025-06-03 20:10:46] 2025-06-03 18:05:02,491 | INFO     | task id: 44871837
[2025-06-03 20:10:46] 2025-06-03 18:05:02,491 | INFO     | errors: (none)
[2025-06-03 20:10:46] 2025-06-03 18:05:02,491 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:10:46] 2025-06-03 18:05:02,491 | INFO     | pilot state: finished 
[2025-06-03 20:10:46] 2025-06-03 18:05:02,491 | INFO     | transexitcode: 0
[2025-06-03 20:10:46] 2025-06-03 18:05:02,491 | INFO     | exeerrorcode: 0
[2025-06-03 20:10:46] 2025-06-03 18:05:02,491 | INFO     | exeerrordiag: 
[2025-06-03 20:10:46] 2025-06-03 18:05:02,491 | INFO     | exitcode: 0
[2025-06-03 20:10:46] 2025-06-03 18:05:02,492 | INFO     | exitmsg: OK
[2025-06-03 20:10:46] 2025-06-03 18:05:02,492 | INFO     | cpuconsumptiontime: 61694 s
[2025-06-03 20:10:46] 2025-06-03 18:05:02,492 | INFO     | nevents: 400
[2025-06-03 20:10:46] 2025-06-03 18:05:02,492 | INFO     | neventsw: 0
[2025-06-03 20:10:46] 2025-06-03 18:05:02,492 | INFO     | pid: 24985
[2025-06-03 20:10:46] 2025-06-03 18:05:02,492 | INFO     | pgrp: 24985
[2025-06-03 20:10:46] 2025-06-03 18:05:02,492 | INFO     | corecount: 8
[2025-06-03 20:10:46] 2025-06-03 18:05:02,492 | INFO     | event service: False
[2025-06-03 20:10:46] 2025-06-03 18:05:02,492 | INFO     | sizes: {0: 2405063, 1: 2405262, 12: 2405262, 23: 2405290, 33: 2405318, 44: 2405374, 55: 2405530, 66: 2405558, 76: 2405586, 87: 2405876, 16631: 2436919, 16635: 2445
[2025-06-03 20:10:46] 2025-06-03 18:05:02,492 | INFO     | --------------------------------------------------
[2025-06-03 20:10:46] 2025-06-03 18:05:02,492 | INFO     | 
[2025-06-03 20:10:46] 2025-06-03 18:05:02,493 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 20:10:46] 2025-06-03 18:05:02,535 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:10:46] 2025-06-03 18:05:02,535 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:10:46] 2025-06-03 18:05:02,535 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:10:46] 2025-06-03 18:05:02,535 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:10:46] 2025-06-03 18:05:02,535 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:10:46] 2025-06-03 18:05:02,535 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:10:46] 2025-06-03 18:05:02,536 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:10:46] 2025-06-03 18:05:02,536 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:10:46] 2025-06-03 18:05:02,536 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:10:46] 2025-06-03 18:05:02,536 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:10:46] 2025-06-03 18:05:02,536 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:10:46] 2025-06-03 18:05:02,536 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:10:46] 2025-06-03 18:05:02,536 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:10:46] 2025-06-03 18:05:02,536 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:10:46] 2025-06-03 18:05:02,536 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:10:46] 2025-06-03 18:05:02,536 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:10:46] 2025-06-03 18:05:02,536 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:10:46] 2025-06-03 18:05:02,537 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:10:46] 2025-06-03 18:05:02,537 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:10:46] 2025-06-03 18:05:02,537 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:10:46] 2025-06-03 18:05:02,537 | INFO     | job 6668993106 has completed (purged errors)
[2025-06-03 20:10:46] 2025-06-03 18:05:02,537 | INFO     | overall cleanup function is called
[2025-06-03 20:10:46] 2025-06-03 18:05:03,546 | INFO     | --- collectZombieJob: --- 10, [24985]
[2025-06-03 20:10:46] 2025-06-03 18:05:03,546 | INFO     | zombie collector waiting for pid 24985
[2025-06-03 20:10:46] 2025-06-03 18:05:03,547 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:10:46] 2025-06-03 18:05:03,547 | INFO     | collected zombie processes
[2025-06-03 20:10:46] 2025-06-03 18:05:03,547 | INFO     | will attempt to kill all subprocesses of pid=24985
[2025-06-03 20:10:46] 2025-06-03 18:05:03,645 | INFO     | process IDs to be killed: [24985] (in reverse order)
[2025-06-03 20:10:46] 2025-06-03 18:05:03,707 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:10:46] 2025-06-03 18:05:03,707 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:10:46] 2025-06-03 18:05:03,711 | INFO     | did not find any defunct processes belonging to 24985
[2025-06-03 20:10:46] 2025-06-03 18:05:03,714 | INFO     | did not find any defunct processes belonging to 24985
[2025-06-03 20:10:46] 2025-06-03 18:05:03,714 | INFO     | ready for new job
[2025-06-03 20:10:46] 2025-06-03 18:05:03,715 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:10:46] 2025-06-03 18:05:03,716 | INFO     | **************************************
[2025-06-03 20:10:46] 2025-06-03 18:05:03,717 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:10:46] 2025-06-03 18:05:03,717 | INFO     | **************************************
[2025-06-03 20:10:46] 2025-06-03 18:05:03,717 | INFO     | 
[2025-06-03 20:10:46] 2025-06-03 18:05:03,717 | INFO     | pilot is running in a VM
[2025-06-03 20:10:46] 2025-06-03 18:05:03,717 | INFO     | architecture information:
[2025-06-03 20:10:46] 2025-06-03 18:05:03,718 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:10:46] 2025-06-03 18:05:03,735 | INFO     | cat /etc/os-release:
[2025-06-03 20:10:46] NAME="CentOS Linux"
[2025-06-03 20:10:46] VERSION="7 (Core)"
[2025-06-03 20:10:46] ID="centos"
[2025-06-03 20:10:46] ID_LIKE="rhel fedora"
[2025-06-03 20:10:46] VERSION_ID="7"
[2025-06-03 20:10:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:10:46] ANSI_COLOR="0;31"
[2025-06-03 20:10:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:10:46] HOME_URL="https://www.centos.org/"
[2025-06-03 20:10:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:10:46] 
[2025-06-03 20:10:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:10:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:10:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:10:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:10:46] 
[2025-06-03 20:10:46] 2025-06-03 18:05:03,736 | INFO     | **************************************
[2025-06-03 20:10:46] 2025-06-03 18:05:04,239 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 20:10:46] 2025-06-03 18:05:04,400 | INFO     | sufficient remaining disk space (496618176512 B)
[2025-06-03 20:10:46] 2025-06-03 18:05:04,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:10:46] 2025-06-03 18:05:04,401 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:10:46] 2025-06-03 18:05:04,401 | INFO     | update_server=False
[2025-06-03 20:10:46] 2025-06-03 18:05:04,401 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:10:46] 2025-06-03 18:05:04,402 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:10:46] 2025-06-03 18:05:04,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:10:46] 2025-06-03 18:05:04,410 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:10:46] 2025-06-03 18:05:04,481 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 20:10:46] 2025-06-03 18:05:04,481 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 20:10:46] 2025-06-03 18:05:04,482 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:10:46] 2025-06-03 18:05:04,482 | INFO     | will abort loop
[2025-06-03 20:10:46] 2025-06-03 18:05:04,742 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:10:46] 2025-06-03 18:05:04,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:10:46] 2025-06-03 18:05:04,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:10:46] 2025-06-03 18:05:04,767 | INFO     | all payload control threads have been joined
[2025-06-03 20:10:46] 2025-06-03 18:05:04,773 | INFO     | all job control threads have been joined
[2025-06-03 20:10:46] 2025-06-03 18:05:05,380 | INFO     | all data control threads have been joined
[2025-06-03 20:10:46] 2025-06-03 18:05:05,407 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:10:46] 2025-06-03 18:05:05,416 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:10:46] 2025-06-03 18:05:05,487 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:10:46] 2025-06-03 18:05:05,557 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:10:46] 2025-06-03 18:05:05,772 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:10:46] 2025-06-03 18:05:05,773 | INFO     | [payload] control thread has finished
[2025-06-03 20:10:46] 2025-06-03 18:05:05,779 | INFO     | [job] control thread has finished
[2025-06-03 20:10:46] 2025-06-03 18:05:06,112 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:10:46] 2025-06-03 18:05:06,361 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:10:46] 2025-06-03 18:05:06,385 | INFO     | [data] control thread has finished
[2025-06-03 20:10:46] 2025-06-03 18:05:06,408 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:10:46] 2025-06-03 18:05:06,447 | INFO     | [job] validate thread has finished
[2025-06-03 20:10:46] 2025-06-03 18:05:06,456 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:10:46] 2025-06-03 18:05:06,552 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:10:46] 2025-06-03 18:05:06,701 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:10:46] 2025-06-03 18:05:08,410 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:10:46] 2025-06-03 18:05:09,563 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139915309037376)>', '<ExcThread(monitor, started 139914574284544)>']
[2025-06-03 20:10:46] 2025-06-03 18:05:09,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:10:46] 2025-06-03 18:05:09,771 | INFO     | [monitor] control thread has ended
[2025-06-03 20:10:46] 2025-06-03 18:05:14,589 | INFO     | all workflow threads have been joined
[2025-06-03 20:10:46] 2025-06-03 18:05:14,589 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:10:46] 2025-06-03 18:05:14,590 | INFO     | traces error code: 0
[2025-06-03 20:10:46] 2025-06-03 18:05:14,590 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:10:46] 2025-06-03 18:05:14,773 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:10:46] 2025-06-03 18:05:14,781 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:10:46] 2025-06-03 18:05:14,787 [wrapper] pilotpid: 18347
[2025-06-03 20:10:46] 2025-06-03 18:05:14,797 [wrapper] Pilot exit status: 0
[2025-06-03 20:10:46] 2025-06-03 18:05:14,835 [wrapper] pandaids: 6668993106
[2025-06-03 20:10:46] 2025-06-03 18:05:14,968 [wrapper] cleanup supervisor_pilot 31410 18348
[2025-06-03 20:10:46] 2025-06-03 18:05:15,021 [wrapper] Test setup, not cleaning
[2025-06-03 20:10:46] 2025-06-03 18:05:15,038 [wrapper] apfmon messages muted
[2025-06-03 20:10:46] 2025-06-03 18:05:15,044 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:10:46] 2025-06-03 18:05:15,047 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:10:46]  *** Error codes and diagnostics ***
[2025-06-03 20:10:46]     "exeErrorCode": 0,
[2025-06-03 20:10:46]     "exeErrorDiag": "",
[2025-06-03 20:10:46]     "pilotErrorCode": 0,
[2025-06-03 20:10:46]     "pilotErrorDiag": "",
[2025-06-03 20:10:46]  *** Listing of results directory ***
[2025-06-03 20:10:46] total 412532
[2025-06-03 20:10:46] -rw-r--r--. 1 boinc boinc    495897 May 29 02:49 pilot3.tar.gz
[2025-06-03 20:10:46] -rw-r--r--. 1 boinc boinc      5111 May 29 02:51 queuedata.json
[2025-06-03 20:10:46] -rwx------. 1 boinc boinc     37140 May 29 02:52 runpilot2-wrapper.sh
[2025-06-03 20:10:46] -rw-r--r--. 1 boinc boinc       100 Jun  3 14:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:10:46] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 14:50 run_atlas
[2025-06-03 20:10:46] -rw-r--r--. 1 boinc boinc       105 Jun  3 14:50 job.xml
[2025-06-03 20:10:46] -rw-r--r--. 1 boinc boinc      6392 Jun  3 14:50 init_data.xml
[2025-06-03 20:10:46] -rw-r--r--. 2 boinc boinc 222427540 Jun  3 14:50 EVNT.44871834._003603.pool.root.1
[2025-06-03 20:10:46] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:50 start_atlas.sh
[2025-06-03 20:10:46] drwxrwx--x. 2 boinc boinc        68 Jun  3 14:50 shared
[2025-06-03 20:10:46] -rw-r--r--. 2 boinc boinc    508881 Jun  3 14:50 input.tar.gz
[2025-06-03 20:10:46] -rw-r--r--. 1 boinc boinc         0 Jun  3 14:50 boinc_lockfile
[2025-06-03 20:10:46] -rw-r--r--. 1 boinc boinc      2559 Jun  3 15:20 pandaJob.out
[2025-06-03 20:10:46] -rw-------. 1 boinc boinc    982666 Jun  3 15:24 agis_schedconf.cvmfs.json
[2025-06-03 20:10:46] drwx------. 4 boinc boinc      4096 Jun  3 15:24 pilot3
[2025-06-03 20:10:46] -rw-------. 1 boinc boinc 192503756 Jun  3 20:03 HITS.44871837._092633.pool.root.1
[2025-06-03 20:10:46] -rw-r--r--. 1 boinc boinc       531 Jun  3 20:04 boinc_task_state.xml
[2025-06-03 20:10:46] -rw-------. 1 boinc boinc      1017 Jun  3 20:04 memory_monitor_summary.json
[2025-06-03 20:10:46] -rw-------. 1 boinc boinc   1603667 Jun  3 20:04 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:10:46] -rw-------. 1 boinc boinc    414292 Jun  3 20:04 log.44871837._092633.job.log.tgz.1
[2025-06-03 20:10:46] -rw-------. 1 boinc boinc        95 Jun  3 20:04 pilot_heartbeat.json
[2025-06-03 20:10:46] -rw-------. 1 boinc boinc      7696 Jun  3 20:05 heartbeat.json
[2025-06-03 20:10:46] -rw-------. 1 boinc boinc      4602 Jun  3 20:05 pilotlog.txt
[2025-06-03 20:10:46] -rw-------. 1 boinc boinc   1432317 Jun  3 20:05 log.44871837._092633.job.log.1
[2025-06-03 20:10:46] -rw-------. 1 boinc boinc       357 Jun  3 20:05 output.list
[2025-06-03 20:10:46] -rw-r--r--. 1 boinc boinc       620 Jun  3 20:05 runtime_log
[2025-06-03 20:10:46] -rw-------. 1 boinc boinc   1863680 Jun  3 20:05 result.tar.gz
[2025-06-03 20:10:46] -rw-r--r--. 1 boinc boinc      8659 Jun  3 20:05 runtime_log.err
[2025-06-03 20:10:46] -rw-------. 1 boinc boinc       657 Jun  3 20:05 6ZtMDmGgge7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYQdKDmOsSEen.diag
[2025-06-03 20:10:46] -rw-r--r--. 1 boinc boinc      8192 Jun  3 20:10 boinc_mmap_file
[2025-06-03 20:10:46] -rw-r--r--. 1 boinc boinc        28 Jun  3 20:10 wrapper_checkpoint.txt
[2025-06-03 20:10:46] -rw-r--r--. 1 boinc boinc     20480 Jun  3 20:10 stderr.txt
[2025-06-03 20:10:46] HITS file was successfully produced:
[2025-06-03 20:10:46] -rw-------. 1 boinc boinc 192503756 Jun  3 20:03 shared/HITS.pool.root.1
[2025-06-03 20:10:46]  *** Contents of shared directory: ***
[2025-06-03 20:10:46] total 407544
[2025-06-03 20:10:46] -rw-r--r--. 2 boinc boinc 222427540 Jun  3 14:50 ATLAS.root_0
[2025-06-03 20:10:46] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:50 start_atlas.sh
[2025-06-03 20:10:46] -rw-r--r--. 2 boinc boinc    508881 Jun  3 14:50 input.tar.gz
[2025-06-03 20:10:46] -rw-------. 1 boinc boinc 192503756 Jun  3 20:03 HITS.pool.root.1
[2025-06-03 20:10:46] -rw-------. 1 boinc boinc   1863680 Jun  3 20:05 result.tar.gz
20:10:48 (29171): run_atlas exited; CPU time 61910.363931
20:10:48 (29171): called boinc_finish(0)

</stderr_txt>
]]>

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