Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:10:32 (3909): wrapper (7.7.26015): starting
14:10:32 (3909): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:10:32] Arguments: --nthreads 8
[2025-06-03 14:10:32] Threads: 8
[2025-06-03 14:10:32] Checking for CVMFS
[2025-06-03 14:10:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:10:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:10:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:10:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:10:33] 2.11.2.0 20954 31892 88444 146741 2 155 17210338 25165825 3291 130560 0 16121239 99.821 17362517 1993 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 14:10:33] CVMFS is ok
[2025-06-03 14:10:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:10:33] Checking for apptainer binary...
[2025-06-03 14:10:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:10:33] Running /usr/bin/apptainer --version
[2025-06-03 14:10:33] apptainer version 1.3.2-1.el7
[2025-06-03 14:10:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:10:34] cg-vwn319.simple-grid.lan
[2025-06-03 14:10:34] apptainer works
[2025-06-03 14:10:34] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:10:34] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:10:34] Starting ATLAS job with PandaID=6677443783
[2025-06-03 14:10:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:05:44]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:05:44] 2025-06-03 16:04:52,903 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:05:44] 2025-06-03 16:04:52,903 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:05:44] 2025-06-03 16:04:52,903 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:05:44] 2025-06-03 16:04:52,909 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:05:44] 2025-06-03 16:04:52,911 | INFO     | sum of square deviations: 3675146117.0
[2025-06-03 18:05:44] 2025-06-03 16:04:52,913 | INFO     | sum of deviations: -45218945407.0
[2025-06-03 18:05:44] 2025-06-03 16:04:52,913 | INFO     | mean x: 1748959632.5
[2025-06-03 18:05:44] 2025-06-03 16:04:52,913 | INFO     | mean y: 2534401.052631579
[2025-06-03 18:05:44] 2025-06-03 16:04:52,914 | INFO     | -- intersect: 21521708774.892715
[2025-06-03 18:05:44] 2025-06-03 16:04:52,914 | INFO     | intersect: 21521708774.892715
[2025-06-03 18:05:44] 2025-06-03 16:04:52,914 | INFO     | chi2: 2.9012231991961492
[2025-06-03 18:05:44] 2025-06-03 16:04:52,915 | INFO     | sum of square deviations: 3438620752.0
[2025-06-03 18:05:44] 2025-06-03 16:04:52,917 | INFO     | sum of deviations: -28506497369.000004
[2025-06-03 18:05:44] 2025-06-03 16:04:52,917 | INFO     | mean x: 1748959480.0
[2025-06-03 18:05:44] 2025-06-03 16:04:52,917 | INFO     | mean y: 2545004.053811659
[2025-06-03 18:05:44] 2025-06-03 16:04:52,917 | INFO     | -- intersect: 14501587617.610289
[2025-06-03 18:05:44] 2025-06-03 16:04:52,917 | INFO     | intersect: 14501587617.610289
[2025-06-03 18:05:44] 2025-06-03 16:04:52,918 | INFO     | chi2: 2.1385398680616303
[2025-06-03 18:05:44] 2025-06-03 16:04:52,918 | INFO     | current chi2=2.1385398680616303 (change=26.288336979582883 %)
[2025-06-03 18:05:44] 2025-06-03 16:04:52,919 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 18:05:44] 2025-06-03 16:04:52,920 | INFO     | sum of deviations: -27043152936.000004
[2025-06-03 18:05:44] 2025-06-03 16:04:52,921 | INFO     | mean x: 1748959327.5
[2025-06-03 18:05:44] 2025-06-03 16:04:52,921 | INFO     | mean y: 2545991.366972477
[2025-06-03 18:05:44] 2025-06-03 16:04:52,921 | INFO     | -- intersect: 14725612295.773521
[2025-06-03 18:05:44] 2025-06-03 16:04:52,921 | INFO     | intersect: 14725612295.773521
[2025-06-03 18:05:44] 2025-06-03 16:04:52,922 | INFO     | chi2: 2.137560889103622
[2025-06-03 18:05:44] 2025-06-03 16:04:52,925 | INFO     | current chi2=2.137560889103622 (change=0.04577791476460543 %)
[2025-06-03 18:05:44] 2025-06-03 16:04:52,925 | INFO     | right removable region: 217
[2025-06-03 18:05:44] 2025-06-03 16:04:52,926 | INFO     | sum of square deviations: 3438620752.0
[2025-06-03 18:05:44] 2025-06-03 16:04:52,928 | INFO     | sum of deviations: -89152532302.99998
[2025-06-03 18:05:44] 2025-06-03 16:04:52,928 | INFO     | mean x: 1748959785.0
[2025-06-03 18:05:44] 2025-06-03 16:04:52,928 | INFO     | mean y: 2562518.331838565
[2025-06-03 18:05:44] 2025-06-03 16:04:52,928 | INFO     | -- intersect: 45347543827.52985
[2025-06-03 18:05:44] 2025-06-03 16:04:52,928 | INFO     | intersect: 45347543827.52985
[2025-06-03 18:05:44] 2025-06-03 16:04:52,929 | INFO     | chi2: 1.0497746730802977
[2025-06-03 18:05:44] 2025-06-03 16:04:52,929 | INFO     | current chi2=1.0497746730802977 (change=63.816135436557865 %)
[2025-06-03 18:05:44] 2025-06-03 16:04:52,929 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 18:05:44] 2025-06-03 16:04:52,931 | INFO     | sum of deviations: -92218193931.00002
[2025-06-03 18:05:44] 2025-06-03 16:04:52,931 | INFO     | mean x: 1748959937.5
[2025-06-03 18:05:44] 2025-06-03 16:04:52,932 | INFO     | mean y: 2564563.0733944955
[2025-06-03 18:05:44] 2025-06-03 16:04:52,932 | INFO     | -- intersect: 50208805694.83133
[2025-06-03 18:05:44] 2025-06-03 16:04:52,932 | INFO     | intersect: 50208805694.83133
[2025-06-03 18:05:44] 2025-06-03 16:04:52,932 | INFO     | chi2: 0.9995724964290769
[2025-06-03 18:05:44] 2025-06-03 16:04:52,932 | INFO     | current chi2=0.9995724964290769 (change=4.7821859241388704 %)
[2025-06-03 18:05:44] 2025-06-03 16:04:52,933 | INFO     | left removable region: 20
[2025-06-03 18:05:44] 2025-06-03 16:04:52,933 | INFO     | sum of square deviations: 2370641658.0
[2025-06-03 18:05:44] 2025-06-03 16:04:52,935 | INFO     | sum of deviations: -62702271062.99999
[2025-06-03 18:05:44] 2025-06-03 16:04:52,935 | INFO     | mean x: 1748959907.0
[2025-06-03 18:05:44] 2025-06-03 16:04:52,935 | INFO     | mean y: 2570785.345177665
[2025-06-03 18:05:44] 2025-06-03 16:04:52,935 | INFO     | -- intersect: 46261674432.2251
[2025-06-03 18:05:44] 2025-06-03 16:04:52,935 | INFO     | intersect: 46261674432.2251
[2025-06-03 18:05:44] 2025-06-03 16:04:52,936 | INFO     | chi2: 0.19855104877448562
[2025-06-03 18:05:44] 2025-06-03 16:04:52,942 | INFO     | -- intersect: 46261674432.2251
[2025-06-03 18:05:44] 2025-06-03 16:04:52,942 | INFO     | current memory leak: -26.45 B/s (using 197 data points, chi2=0.20)
[2025-06-03 18:05:44] 2025-06-03 16:04:52,943 | INFO     | ..............................
[2025-06-03 18:05:44] 2025-06-03 16:04:52,943 | INFO     | . Timing measurements:
[2025-06-03 18:05:44] 2025-06-03 16:04:52,944 | INFO     | . get job = 0 s
[2025-06-03 18:05:44] 2025-06-03 16:04:52,944 | INFO     | . initial setup = 2 s
[2025-06-03 18:05:44] 2025-06-03 16:04:52,944 | INFO     | . payload setup = 14 s
[2025-06-03 18:05:44] 2025-06-03 16:04:52,944 | INFO     | . stage-in = 0 s
[2025-06-03 18:05:44] 2025-06-03 16:04:52,944 | INFO     | . payload execution = 13915 s
[2025-06-03 18:05:44] 2025-06-03 16:04:52,944 | INFO     | . stage-out = 5 s
[2025-06-03 18:05:44] 2025-06-03 16:04:52,944 | INFO     | . log creation = 1 s
[2025-06-03 18:05:44] 2025-06-03 16:04:52,944 | INFO     | ..............................
[2025-06-03 18:05:44] 2025-06-03 16:04:53,478 | INFO     | 
[2025-06-03 18:05:44] 2025-06-03 16:04:53,478 | INFO     | job summary report
[2025-06-03 18:05:44] 2025-06-03 16:04:53,478 | INFO     | --------------------------------------------------
[2025-06-03 18:05:44] 2025-06-03 16:04:53,478 | INFO     | PanDA job id: 6677443783
[2025-06-03 18:05:44] 2025-06-03 16:04:53,479 | INFO     | task id: 45006595
[2025-06-03 18:05:44] 2025-06-03 16:04:53,479 | INFO     | errors: (none)
[2025-06-03 18:05:44] 2025-06-03 16:04:53,479 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:05:44] 2025-06-03 16:04:53,479 | INFO     | pilot state: finished 
[2025-06-03 18:05:44] 2025-06-03 16:04:53,479 | INFO     | transexitcode: 0
[2025-06-03 18:05:44] 2025-06-03 16:04:53,479 | INFO     | exeerrorcode: 0
[2025-06-03 18:05:44] 2025-06-03 16:04:53,479 | INFO     | exeerrordiag: 
[2025-06-03 18:05:44] 2025-06-03 16:04:53,479 | INFO     | exitcode: 0
[2025-06-03 18:05:44] 2025-06-03 16:04:53,479 | INFO     | exitmsg: OK
[2025-06-03 18:05:44] 2025-06-03 16:04:53,480 | INFO     | cpuconsumptiontime: 52343 s
[2025-06-03 18:05:44] 2025-06-03 16:04:53,480 | INFO     | nevents: 400
[2025-06-03 18:05:44] 2025-06-03 16:04:53,480 | INFO     | neventsw: 0
[2025-06-03 18:05:44] 2025-06-03 16:04:53,480 | INFO     | pid: 14084
[2025-06-03 18:05:44] 2025-06-03 16:04:53,480 | INFO     | pgrp: 14084
[2025-06-03 18:05:44] 2025-06-03 16:04:53,480 | INFO     | corecount: 8
[2025-06-03 18:05:44] 2025-06-03 16:04:53,480 | INFO     | event service: False
[2025-06-03 18:05:44] 2025-06-03 16:04:53,480 | INFO     | sizes: {0: 2404348, 1: 2405204, 2: 2405204, 9: 2405438, 12: 2405466, 13934: 2435166, 13935: 2435293, 13941: 2444290, 13942: 2444346, 14024: 2444516}
[2025-06-03 18:05:44] 2025-06-03 16:04:53,480 | INFO     | --------------------------------------------------
[2025-06-03 18:05:44] 2025-06-03 16:04:53,481 | INFO     | 
[2025-06-03 18:05:44] 2025-06-03 16:04:53,481 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-03 18:05:44] 2025-06-03 16:04:54,068 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:05:44] 2025-06-03 16:04:54,069 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:05:44] 2025-06-03 16:04:54,069 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:05:44] 2025-06-03 16:04:54,069 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:05:44] 2025-06-03 16:04:54,069 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:05:44] 2025-06-03 16:04:54,069 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:05:44] 2025-06-03 16:04:54,070 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:05:44] 2025-06-03 16:04:54,070 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:05:44] 2025-06-03 16:04:54,070 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:05:44] 2025-06-03 16:04:54,070 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:05:44] 2025-06-03 16:04:54,070 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:05:44] 2025-06-03 16:04:54,070 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:05:44] 2025-06-03 16:04:54,070 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:05:44] 2025-06-03 16:04:54,070 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:05:44] 2025-06-03 16:04:54,071 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:05:44] 2025-06-03 16:04:54,071 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:05:44] 2025-06-03 16:04:54,071 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:05:44] 2025-06-03 16:04:54,071 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:05:44] 2025-06-03 16:04:54,071 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:05:44] 2025-06-03 16:04:54,071 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:05:44] 2025-06-03 16:04:54,071 | INFO     | job 6677443783 has completed (purged errors)
[2025-06-03 18:05:44] 2025-06-03 16:04:54,071 | INFO     | overall cleanup function is called
[2025-06-03 18:05:44] 2025-06-03 16:04:55,088 | INFO     | --- collectZombieJob: --- 10, [14084]
[2025-06-03 18:05:44] 2025-06-03 16:04:55,088 | INFO     | zombie collector waiting for pid 14084
[2025-06-03 18:05:44] 2025-06-03 16:04:55,088 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:05:44] 2025-06-03 16:04:55,089 | INFO     | collected zombie processes
[2025-06-03 18:05:44] 2025-06-03 16:04:55,089 | INFO     | will attempt to kill all subprocesses of pid=14084
[2025-06-03 18:05:44] 2025-06-03 16:04:55,243 | INFO     | process IDs to be killed: [14084] (in reverse order)
[2025-06-03 18:05:44] 2025-06-03 16:04:56,264 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:05:44] 2025-06-03 16:04:56,264 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:05:44] 2025-06-03 16:04:56,268 | INFO     | did not find any defunct processes belonging to 14084
[2025-06-03 18:05:44] 2025-06-03 16:04:56,271 | INFO     | did not find any defunct processes belonging to 14084
[2025-06-03 18:05:44] 2025-06-03 16:04:56,272 | INFO     | ready for new job
[2025-06-03 18:05:44] 2025-06-03 16:04:56,276 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:05:44] 2025-06-03 16:04:56,278 | INFO     | **************************************
[2025-06-03 18:05:44] 2025-06-03 16:04:56,278 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:05:44] 2025-06-03 16:04:56,278 | INFO     | **************************************
[2025-06-03 18:05:44] 2025-06-03 16:04:56,278 | INFO     | 
[2025-06-03 18:05:44] 2025-06-03 16:04:56,279 | INFO     | pilot is running in a VM
[2025-06-03 18:05:44] 2025-06-03 16:04:56,279 | INFO     | architecture information:
[2025-06-03 18:05:44] 2025-06-03 16:04:56,294 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:05:44] 2025-06-03 16:04:56,316 | INFO     | 14047s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 18:05:44] 2025-06-03 16:04:56,514 | INFO     | cat /etc/os-release:
[2025-06-03 18:05:44] NAME="CentOS Linux"
[2025-06-03 18:05:44] VERSION="7 (Core)"
[2025-06-03 18:05:44] ID="centos"
[2025-06-03 18:05:44] ID_LIKE="rhel fedora"
[2025-06-03 18:05:44] VERSION_ID="7"
[2025-06-03 18:05:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:05:44] ANSI_COLOR="0;31"
[2025-06-03 18:05:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:05:44] HOME_URL="https://www.centos.org/"
[2025-06-03 18:05:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:05:44] 
[2025-06-03 18:05:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:05:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:05:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:05:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:05:44] 
[2025-06-03 18:05:44] 2025-06-03 16:04:56,515 | INFO     | **************************************
[2025-06-03 18:05:44] 2025-06-03 16:04:57,021 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-03 18:05:44] 2025-06-03 16:04:57,173 | INFO     | sufficient remaining disk space (496961060864 B)
[2025-06-03 18:05:44] 2025-06-03 16:04:57,173 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:05:44] 2025-06-03 16:04:57,173 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:05:44] 2025-06-03 16:04:57,173 | INFO     | update_server=False
[2025-06-03 18:05:44] 2025-06-03 16:04:57,174 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:05:44] 2025-06-03 16:04:57,174 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:05:44] 2025-06-03 16:04:57,428 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:05:44] 2025-06-03 16:04:57,428 | INFO     | aborting loop
[2025-06-03 18:05:44] 2025-06-03 16:04:57,453 | INFO     | all data control threads have been joined
[2025-06-03 18:05:44] 2025-06-03 16:04:57,486 | INFO     | PID=7548 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 18:05:44] 2025-06-03 16:04:57,486 | INFO     | .. there are 9 such processes running
[2025-06-03 18:05:44] 2025-06-03 16:04:57,486 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:05:44] 2025-06-03 16:04:57,486 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:05:44] 2025-06-03 16:04:57,486 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:05:44] 2025-06-03 16:04:57,822 | INFO     | all payload control threads have been joined
[2025-06-03 18:05:44] 2025-06-03 16:04:58,180 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:05:44] 2025-06-03 16:04:58,194 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:05:44] 2025-06-03 16:04:58,433 | INFO     | all job control threads have been joined
[2025-06-03 18:05:44] 2025-06-03 16:04:58,434 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:05:44] 2025-06-03 16:04:58,459 | INFO     | [data] control thread has finished
[2025-06-03 18:05:44] 2025-06-03 16:04:58,646 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:05:44] 2025-06-03 16:04:58,828 | INFO     | [payload] control thread has finished
[2025-06-03 18:05:44] 2025-06-03 16:04:58,902 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:05:44] 2025-06-03 16:04:58,903 | INFO     | [job] validate thread has finished
[2025-06-03 18:05:44] 2025-06-03 16:04:59,183 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:05:44] 2025-06-03 16:04:59,190 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:05:44] 2025-06-03 16:04:59,200 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:05:44] 2025-06-03 16:04:59,239 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:05:44] 2025-06-03 16:04:59,439 | INFO     | [job] control thread has finished
[2025-06-03 18:05:44] 2025-06-03 16:04:59,480 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:05:44] 2025-06-03 16:04:59,497 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:05:44] 2025-06-03 16:04:59,526 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:05:44] 2025-06-03 16:04:59,656 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:05:44] 2025-06-03 16:05:03,199 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:05:44] 2025-06-03 16:05:03,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139852591490880)>', '<ExcThread(monitor, started 139852154648320)>']
[2025-06-03 18:05:44] 2025-06-03 16:05:03,522 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:05:44] 2025-06-03 16:05:03,522 | INFO     | [monitor] control thread has ended
[2025-06-03 18:05:44] 2025-06-03 16:05:08,348 | INFO     | all workflow threads have been joined
[2025-06-03 18:05:44] 2025-06-03 16:05:08,348 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:05:44] 2025-06-03 16:05:08,348 | INFO     | traces error code: 0
[2025-06-03 18:05:44] 2025-06-03 16:05:08,349 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:05:44] 2025-06-03 16:05:08,662 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:05:44] 2025-06-03 16:05:08,742 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:05:44] 2025-06-03 16:05:08,795 [wrapper] pilotpid: 7548
[2025-06-03 18:05:44] 2025-06-03 16:05:08,853 [wrapper] Pilot exit status: 0
[2025-06-03 18:05:44] 2025-06-03 16:05:09,460 [wrapper] pandaids: 6677443783
[2025-06-03 18:05:44] 2025-06-03 16:05:10,164 [wrapper] cleanup supervisor_pilot 13468 7549
[2025-06-03 18:05:44] 2025-06-03 16:05:10,211 [wrapper] Test setup, not cleaning
[2025-06-03 18:05:44] 2025-06-03 16:05:10,230 [wrapper] apfmon messages muted
[2025-06-03 18:05:44] 2025-06-03 16:05:10,263 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:05:44] 2025-06-03 16:05:10,316 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:05:44]  *** Error codes and diagnostics ***
[2025-06-03 18:05:44]     "exeErrorCode": 0,
[2025-06-03 18:05:44]     "exeErrorDiag": "",
[2025-06-03 18:05:44]     "pilotErrorCode": 0,
[2025-06-03 18:05:44]     "pilotErrorDiag": "",
[2025-06-03 18:05:44]  *** Listing of results directory ***
[2025-06-03 18:05:44] total 397296
[2025-06-03 18:05:44] -rw-r--r--. 1 boinc boinc    495897 Jun  3 03:51 pilot3.tar.gz
[2025-06-03 18:05:44] -rwx------. 1 boinc boinc     37140 Jun  3 04:19 runpilot2-wrapper.sh
[2025-06-03 18:05:44] -rw-r--r--. 1 boinc boinc      5111 Jun  3 04:19 queuedata.json
[2025-06-03 18:05:44] -rw-r--r--. 1 boinc boinc       100 Jun  3 14:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:05:44] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 14:10 run_atlas
[2025-06-03 18:05:44] -rw-r--r--. 1 boinc boinc       105 Jun  3 14:10 job.xml
[2025-06-03 18:05:44] -rw-r--r--. 1 boinc boinc      6391 Jun  3 14:10 init_data.xml
[2025-06-03 18:05:44] -rw-r--r--. 2 boinc boinc 214040721 Jun  3 14:10 EVNT.45006593._000689.pool.root.1
[2025-06-03 18:05:44] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:10 start_atlas.sh
[2025-06-03 18:05:44] drwxrwx--x. 2 boinc boinc        68 Jun  3 14:10 shared
[2025-06-03 18:05:44] -rw-r--r--. 2 boinc boinc    508877 Jun  3 14:10 input.tar.gz
[2025-06-03 18:05:44] -rw-r--r--. 1 boinc boinc         0 Jun  3 14:10 boinc_lockfile
[2025-06-03 18:05:44] -rw-r--r--. 1 boinc boinc      2521 Jun  3 14:10 pandaJob.out
[2025-06-03 18:05:44] -rw-------. 1 boinc boinc    982666 Jun  3 14:10 agis_schedconf.cvmfs.json
[2025-06-03 18:05:44] drwx------. 4 boinc boinc      4096 Jun  3 14:10 pilot3
[2025-06-03 18:05:44] -rw-------. 1 boinc boinc 185807811 Jun  3 18:02 HITS.45006595._017204.pool.root.1
[2025-06-03 18:05:44] -rw-r--r--. 1 boinc boinc       531 Jun  3 18:02 boinc_task_state.xml
[2025-06-03 18:05:44] -rw-------. 1 boinc boinc      1018 Jun  3 18:03 memory_monitor_summary.json
[2025-06-03 18:05:44] -rw-------. 1 boinc boinc   1603667 Jun  3 18:03 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:05:44] -rw-------. 1 boinc boinc    369777 Jun  3 18:03 log.45006595._017204.job.log.tgz.1
[2025-06-03 18:05:44] -rw-------. 1 boinc boinc        95 Jun  3 18:04 pilot_heartbeat.json
[2025-06-03 18:05:44] -rw-------. 1 boinc boinc      7685 Jun  3 18:04 heartbeat.json
[2025-06-03 18:05:44] -rw-------. 1 boinc boinc      4923 Jun  3 18:05 pilotlog.txt
[2025-06-03 18:05:44] -rw-------. 1 boinc boinc   1212819 Jun  3 18:05 log.45006595._017204.job.log.1
[2025-06-03 18:05:44] -rw-------. 1 boinc boinc       357 Jun  3 18:05 output.list
[2025-06-03 18:05:44] -rw-r--r--. 1 boinc boinc       620 Jun  3 18:05 runtime_log
[2025-06-03 18:05:44] -rw-------. 1 boinc boinc   1597440 Jun  3 18:05 result.tar.gz
[2025-06-03 18:05:44] -rw-------. 1 boinc boinc       656 Jun  3 18:05 TvnLDmxQWg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEBXKDm7wsBUm.diag
[2025-06-03 18:05:44] -rw-r--r--. 1 boinc boinc      8659 Jun  3 18:05 runtime_log.err
[2025-06-03 18:05:44] -rw-r--r--. 1 boinc boinc      8192 Jun  3 18:05 boinc_mmap_file
[2025-06-03 18:05:44] -rw-r--r--. 1 boinc boinc        28 Jun  3 18:05 wrapper_checkpoint.txt
[2025-06-03 18:05:44] -rw-r--r--. 1 boinc boinc     20603 Jun  3 18:05 stderr.txt
[2025-06-03 18:05:44] HITS file was successfully produced:
[2025-06-03 18:05:44] -rw-------. 1 boinc boinc 185807811 Jun  3 18:02 shared/HITS.pool.root.1
[2025-06-03 18:05:44]  *** Contents of shared directory: ***
[2025-06-03 18:05:44] total 392560
[2025-06-03 18:05:44] -rw-r--r--. 2 boinc boinc 214040721 Jun  3 14:10 ATLAS.root_0
[2025-06-03 18:05:44] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:10 start_atlas.sh
[2025-06-03 18:05:44] -rw-r--r--. 2 boinc boinc    508877 Jun  3 14:10 input.tar.gz
[2025-06-03 18:05:44] -rw-------. 1 boinc boinc 185807811 Jun  3 18:02 HITS.pool.root.1
[2025-06-03 18:05:44] -rw-------. 1 boinc boinc   1597440 Jun  3 18:05 result.tar.gz
18:05:46 (3909): run_atlas exited; CPU time 52517.361727
18:05:46 (3909): called boinc_finish(0)

</stderr_txt>
]]>

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