Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:51:24 (3960628): wrapper (7.7.26015): starting
22:51:24 (3960628): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 22:51:24] Arguments: --nthreads 4
[2025-06-04 22:51:24] Threads: 4
[2025-06-04 22:51:24] Checking for CVMFS
[2025-06-04 22:51:24] No cvmfs_config command found, will try listing directly
[2025-06-04 22:51:24] CVMFS is ok
[2025-06-04 22:51:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:51:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:51:24] Further information can be found at the LHC@home message board.
[2025-06-04 22:51:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:51:24] Checking for apptainer binary...
[2025-06-04 22:51:24] which: no apptainer in ((null))
[2025-06-04 22:51:24] apptainer is not installed, using version from CVMFS
[2025-06-04 22:51:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:51:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-06-04 22:51:25] apptainer works
[2025-06-04 22:51:25] Set ATHENA_PROC_NUMBER=4
[2025-06-04 22:51:25] Set ATHENA_CORE_NUMBER=4
[2025-06-04 22:51:25] Starting ATLAS job with PandaID=6677440505
[2025-06-04 22:51:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:43:29]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:43:29] 2025-06-04 23:43:05,289 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 01:43:29] 2025-06-04 23:43:05,290 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6677440505/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:43:29] 2025-06-04 23:43:05,290 | INFO     | extracted standard info from prmon json
[2025-06-05 01:43:29] 2025-06-04 23:43:05,291 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:43:29] 2025-06-04 23:43:05,291 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:43:29] 2025-06-04 23:43:05,291 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:43:29] 2025-06-04 23:43:05,291 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:43:29] 2025-06-04 23:43:05,295 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:43:29] 2025-06-04 23:43:05,296 | INFO     | sum of square deviations: 1496660620.0
[2025-06-05 01:43:29] 2025-06-04 23:43:05,297 | INFO     | sum of deviations: 9140075788.000002
[2025-06-05 01:43:29] 2025-06-04 23:43:05,297 | INFO     | mean x: 1749075444.0
[2025-06-05 01:43:29] 2025-06-04 23:43:05,297 | INFO     | mean y: 2309303.976331361
[2025-06-05 01:43:29] 2025-06-04 23:43:05,297 | INFO     | -- intersect: -10679258650.347042
[2025-06-05 01:43:29] 2025-06-04 23:43:05,298 | INFO     | intersect: -10679258650.347042
[2025-06-05 01:43:29] 2025-06-04 23:43:05,298 | INFO     | chi2: 2.3664728334878036
[2025-06-05 01:43:29] 2025-06-04 23:43:05,298 | INFO     | sum of square deviations: 1367709365.0
[2025-06-05 01:43:29] 2025-06-04 23:43:05,299 | INFO     | sum of deviations: 18052734151.500004
[2025-06-05 01:43:29] 2025-06-04 23:43:05,300 | INFO     | mean x: 1749075291.5
[2025-06-05 01:43:29] 2025-06-04 23:43:05,300 | INFO     | mean y: 2319567.4085365855
[2025-06-05 01:43:29] 2025-06-04 23:43:05,300 | INFO     | -- intersect: -23084157762.083813
[2025-06-05 01:43:29] 2025-06-04 23:43:05,300 | INFO     | intersect: -23084157762.083813
[2025-06-05 01:43:29] 2025-06-04 23:43:05,300 | INFO     | chi2: 1.711340085083732
[2025-06-05 01:43:29] 2025-06-04 23:43:05,301 | INFO     | current chi2=1.711340085083732 (change=27.683932776803122 %)
[2025-06-05 01:43:29] 2025-06-04 23:43:05,301 | INFO     | sum of square deviations: 1246386160.0
[2025-06-05 01:43:29] 2025-06-04 23:43:05,302 | INFO     | sum of deviations: 17018674381.999996
[2025-06-05 01:43:29] 2025-06-04 23:43:05,302 | INFO     | mean x: 1749075139.0
[2025-06-05 01:43:29] 2025-06-04 23:43:05,302 | INFO     | mean y: 2318267.220125786
[2025-06-05 01:43:29] 2025-06-04 23:43:05,302 | INFO     | -- intersect: -23880280252.882492
[2025-06-05 01:43:29] 2025-06-04 23:43:05,303 | INFO     | intersect: -23880280252.882492
[2025-06-05 01:43:29] 2025-06-04 23:43:05,303 | INFO     | chi2: 1.7128721677659622
[2025-06-05 01:43:29] 2025-06-04 23:43:05,303 | INFO     | current chi2=1.7128721677659622 (change=-0.08952531969443708 %)
[2025-06-05 01:43:29] 2025-06-04 23:43:05,303 | INFO     | right removable region: 158
[2025-06-05 01:43:29] 2025-06-04 23:43:05,304 | INFO     | sum of square deviations: 1367709365.0
[2025-06-05 01:43:29] 2025-06-04 23:43:05,305 | INFO     | sum of deviations: -17594728491.999992
[2025-06-05 01:43:29] 2025-06-04 23:43:05,305 | INFO     | mean x: 1749075596.5
[2025-06-05 01:43:29] 2025-06-04 23:43:05,305 | INFO     | mean y: 2340549.9024390243
[2025-06-05 01:43:29] 2025-06-04 23:43:05,305 | INFO     | -- intersect: 22503107905.838787
[2025-06-05 01:43:29] 2025-06-04 23:43:05,305 | INFO     | intersect: 22503107905.838787
[2025-06-05 01:43:29] 2025-06-04 23:43:05,306 | INFO     | chi2: 0.7559899943842
[2025-06-05 01:43:29] 2025-06-04 23:43:05,306 | INFO     | current chi2=0.7559899943842 (change=68.05414439218424 %)
[2025-06-05 01:43:29] 2025-06-04 23:43:05,306 | INFO     | sum of square deviations: 1246386160.0
[2025-06-05 01:43:29] 2025-06-04 23:43:05,307 | INFO     | sum of deviations: -14601985715.0
[2025-06-05 01:43:29] 2025-06-04 23:43:05,307 | INFO     | mean x: 1749075749.0
[2025-06-05 01:43:29] 2025-06-04 23:43:05,307 | INFO     | mean y: 2336761.849056604
[2025-06-05 01:43:29] 2025-06-04 23:43:05,308 | INFO     | -- intersect: 20493561649.448036
[2025-06-05 01:43:29] 2025-06-04 23:43:05,308 | INFO     | intersect: 20493561649.448036
[2025-06-05 01:43:29] 2025-06-04 23:43:05,308 | INFO     | chi2: 0.7477017955098489
[2025-06-05 01:43:29] 2025-06-04 23:43:05,308 | INFO     | current chi2=0.7477017955098489 (change=1.0963371123849734 %)
[2025-06-05 01:43:29] 2025-06-04 23:43:05,308 | INFO     | left removable region: 20
[2025-06-05 01:43:29] 2025-06-04 23:43:05,309 | INFO     | sum of square deviations: 814878534.5
[2025-06-05 01:43:29] 2025-06-04 23:43:05,309 | INFO     | sum of deviations: 1739049030.4999998
[2025-06-05 01:43:29] 2025-06-04 23:43:05,310 | INFO     | mean x: 1749075718.5
[2025-06-05 01:43:29] 2025-06-04 23:43:05,310 | INFO     | mean y: 2335836.195652174
[2025-06-05 01:43:29] 2025-06-04 23:43:05,310 | INFO     | -- intersect: -3730402607.325731
[2025-06-05 01:43:29] 2025-06-04 23:43:05,310 | INFO     | intersect: -3730402607.325731
[2025-06-05 01:43:29] 2025-06-04 23:43:05,310 | INFO     | chi2: 0.01578195668718252
[2025-06-05 01:43:29] 2025-06-04 23:43:05,311 | INFO     | -- intersect: -3730402607.325731
[2025-06-05 01:43:29] 2025-06-04 23:43:05,311 | INFO     | current memory leak: 2.13 B/s (using 138 data points, chi2=0.02)
[2025-06-05 01:43:29] 2025-06-04 23:43:05,312 | INFO     | ..............................
[2025-06-05 01:43:29] 2025-06-04 23:43:05,312 | INFO     | . Timing measurements:
[2025-06-05 01:43:29] 2025-06-04 23:43:05,312 | INFO     | . get job = 0 s
[2025-06-05 01:43:29] 2025-06-04 23:43:05,312 | INFO     | . initial setup = 1 s
[2025-06-05 01:43:29] 2025-06-04 23:43:05,312 | INFO     | . payload setup = 6 s
[2025-06-05 01:43:29] 2025-06-04 23:43:05,312 | INFO     | . stage-in = 0 s
[2025-06-05 01:43:29] 2025-06-04 23:43:05,312 | INFO     | . payload execution = 10255 s
[2025-06-05 01:43:29] 2025-06-04 23:43:05,312 | INFO     | . stage-out = 0 s
[2025-06-05 01:43:29] 2025-06-04 23:43:05,313 | INFO     | . log creation = 0 s
[2025-06-05 01:43:29] 2025-06-04 23:43:05,313 | INFO     | ..............................
[2025-06-05 01:43:29] 2025-06-04 23:43:05,426 | INFO     | 
[2025-06-05 01:43:29] 2025-06-04 23:43:05,426 | INFO     | job summary report
[2025-06-05 01:43:29] 2025-06-04 23:43:05,426 | INFO     | --------------------------------------------------
[2025-06-05 01:43:29] 2025-06-04 23:43:05,426 | INFO     | PanDA job id: 6677440505
[2025-06-05 01:43:29] 2025-06-04 23:43:05,426 | INFO     | task id: 45006595
[2025-06-05 01:43:29] 2025-06-04 23:43:05,427 | INFO     | errors: (none)
[2025-06-05 01:43:29] 2025-06-04 23:43:05,427 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:43:29] 2025-06-04 23:43:05,427 | INFO     | pilot state: finished 
[2025-06-05 01:43:29] 2025-06-04 23:43:05,427 | INFO     | transexitcode: 0
[2025-06-05 01:43:29] 2025-06-04 23:43:05,427 | INFO     | exeerrorcode: 0
[2025-06-05 01:43:29] 2025-06-04 23:43:05,427 | INFO     | exeerrordiag: 
[2025-06-05 01:43:29] 2025-06-04 23:43:05,427 | INFO     | exitcode: 0
[2025-06-05 01:43:29] 2025-06-04 23:43:05,427 | INFO     | exitmsg: OK
[2025-06-05 01:43:29] 2025-06-04 23:43:05,427 | INFO     | cpuconsumptiontime: 39274 s
[2025-06-05 01:43:29] 2025-06-04 23:43:05,428 | INFO     | nevents: 400
[2025-06-05 01:43:29] 2025-06-04 23:43:05,428 | INFO     | neventsw: 0
[2025-06-05 01:43:29] 2025-06-04 23:43:05,428 | INFO     | pid: 3981546
[2025-06-05 01:43:29] 2025-06-04 23:43:05,428 | INFO     | pgrp: 3981546
[2025-06-05 01:43:29] 2025-06-04 23:43:05,428 | INFO     | corecount: 4
[2025-06-05 01:43:29] 2025-06-04 23:43:05,428 | INFO     | event service: False
[2025-06-05 01:43:29] 2025-06-04 23:43:05,428 | INFO     | sizes: {0: 2397186, 1: 2397328, 5: 2397534, 11: 2397590, 10265: 2426132, 10267: 2435095, 10269: 2435279, 10276: 2435449}
[2025-06-05 01:43:29] 2025-06-04 23:43:05,428 | INFO     | --------------------------------------------------
[2025-06-05 01:43:29] 2025-06-04 23:43:05,428 | INFO     | 
[2025-06-05 01:43:29] 2025-06-04 23:43:05,429 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-06-05 01:43:29] 2025-06-04 23:43:05,446 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:43:29] 2025-06-04 23:43:05,446 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:43:29] 2025-06-04 23:43:05,446 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:43:29] 2025-06-04 23:43:05,447 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:43:29] 2025-06-04 23:43:05,447 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:43:29] 2025-06-04 23:43:05,447 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:43:29] 2025-06-04 23:43:05,447 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:43:29] 2025-06-04 23:43:05,447 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:43:29] 2025-06-04 23:43:05,447 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:43:29] 2025-06-04 23:43:05,447 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:43:29] 2025-06-04 23:43:05,447 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:43:29] 2025-06-04 23:43:05,448 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:43:29] 2025-06-04 23:43:05,448 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:43:29] 2025-06-04 23:43:05,448 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:43:29] 2025-06-04 23:43:05,448 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:43:29] 2025-06-04 23:43:05,448 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:43:29] 2025-06-04 23:43:05,448 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:43:29] 2025-06-04 23:43:05,448 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:43:29] 2025-06-04 23:43:05,448 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:43:29] 2025-06-04 23:43:05,449 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:43:29] 2025-06-04 23:43:05,449 | INFO     | job 6677440505 has completed (purged errors)
[2025-06-05 01:43:29] 2025-06-04 23:43:05,449 | INFO     | overall cleanup function is called
[2025-06-05 01:43:29] 2025-06-04 23:43:06,457 | INFO     | --- collectZombieJob: --- 10, [3981546]
[2025-06-05 01:43:29] 2025-06-04 23:43:06,457 | INFO     | zombie collector waiting for pid 3981546
[2025-06-05 01:43:29] 2025-06-04 23:43:06,457 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:43:29] 2025-06-04 23:43:06,457 | INFO     | collected zombie processes
[2025-06-05 01:43:29] 2025-06-04 23:43:06,457 | INFO     | will attempt to kill all subprocesses of pid=3981546
[2025-06-05 01:43:29] 2025-06-04 23:43:06,753 | INFO     | process IDs to be killed: [3981546] (in reverse order)
[2025-06-05 01:43:29] 2025-06-04 23:43:06,828 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:43:29] 2025-06-04 23:43:06,828 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:43:29] 2025-06-04 23:43:06,836 | INFO     | did not find any defunct processes belonging to 3981546
[2025-06-05 01:43:29] 2025-06-04 23:43:06,844 | INFO     | did not find any defunct processes belonging to 3981546
[2025-06-05 01:43:29] 2025-06-04 23:43:06,844 | INFO     | ready for new job
[2025-06-05 01:43:29] 2025-06-04 23:43:06,844 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:43:29] 2025-06-04 23:43:06,847 | INFO     | **************************************
[2025-06-05 01:43:29] 2025-06-04 23:43:06,847 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:43:29] 2025-06-04 23:43:06,847 | INFO     | **************************************
[2025-06-05 01:43:29] 2025-06-04 23:43:06,847 | INFO     | 
[2025-06-05 01:43:29] 2025-06-04 23:43:06,849 | INFO     | architecture information:
[2025-06-05 01:43:29] 2025-06-04 23:43:06,850 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:43:29] 2025-06-04 23:43:06,863 | INFO     | cat /etc/os-release:
[2025-06-05 01:43:29] NAME="CentOS Linux"
[2025-06-05 01:43:29] VERSION="7 (Core)"
[2025-06-05 01:43:29] ID="centos"
[2025-06-05 01:43:29] ID_LIKE="rhel fedora"
[2025-06-05 01:43:29] VERSION_ID="7"
[2025-06-05 01:43:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:43:29] ANSI_COLOR="0;31"
[2025-06-05 01:43:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:43:29] HOME_URL="https://www.centos.org/"
[2025-06-05 01:43:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:43:29] 
[2025-06-05 01:43:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:43:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:43:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:43:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:43:29] 
[2025-06-05 01:43:29] 2025-06-04 23:43:06,864 | INFO     | **************************************
[2025-06-05 01:43:29] 2025-06-04 23:43:07,367 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-06-05 01:43:29] 2025-06-04 23:43:07,382 | INFO     | sufficient remaining disk space (1659862253568 B)
[2025-06-05 01:43:29] 2025-06-04 23:43:07,382 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:43:29] 2025-06-04 23:43:07,383 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:43:29] 2025-06-04 23:43:07,383 | INFO     | update_server=False
[2025-06-05 01:43:29] 2025-06-04 23:43:07,383 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:43:29] 2025-06-04 23:43:07,383 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:43:29] 2025-06-04 23:43:07,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:43:29] 2025-06-04 23:43:07,884 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:43:29] 2025-06-04 23:43:07,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:43:29] 2025-06-04 23:43:07,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:43:29] 2025-06-04 23:43:08,151 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:43:29] 2025-06-04 23:43:08,151 | INFO     | aborting loop
[2025-06-05 01:43:29] 2025-06-04 23:43:08,386 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:43:29] 2025-06-04 23:43:08,389 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:43:29] 2025-06-04 23:43:08,466 | INFO     | all data control threads have been joined
[2025-06-05 01:43:29] 2025-06-04 23:43:08,497 | INFO     | all payload control threads have been joined
[2025-06-05 01:43:29] 2025-06-04 23:43:08,703 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:43:29] 2025-06-04 23:43:08,767 | INFO     | [job] validate thread has finished
[2025-06-05 01:43:29] 2025-06-04 23:43:08,834 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:43:29] 2025-06-04 23:43:08,903 | INFO     | all job control threads have been joined
[2025-06-05 01:43:29] 2025-06-04 23:43:08,932 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:43:29] 2025-06-04 23:43:09,157 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:43:29] 2025-06-04 23:43:09,188 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:43:29] 2025-06-04 23:43:09,321 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:43:29] 2025-06-04 23:43:09,322 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:43:29] 2025-06-04 23:43:09,389 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:43:29] 2025-06-04 23:43:09,471 | INFO     | [data] control thread has finished
[2025-06-05 01:43:29] 2025-06-04 23:43:09,502 | INFO     | [payload] control thread has finished
[2025-06-05 01:43:29] 2025-06-04 23:43:09,827 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:43:29] 2025-06-04 23:43:09,908 | INFO     | [job] control thread has finished
[2025-06-05 01:43:29] 2025-06-04 23:43:09,951 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:43:29] 2025-06-04 23:43:12,936 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:43:29] 2025-06-04 23:43:14,709 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23396970653504)>', '<ExcThread(monitor, started 23396725245696)>']
[2025-06-05 01:43:29] 2025-06-04 23:43:14,920 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:43:29] 2025-06-04 23:43:14,920 | INFO     | [monitor] control thread has ended
[2025-06-05 01:43:29] 2025-06-04 23:43:19,735 | INFO     | all workflow threads have been joined
[2025-06-05 01:43:29] 2025-06-04 23:43:19,735 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:43:29] 2025-06-04 23:43:19,735 | INFO     | traces error code: 0
[2025-06-05 01:43:29] 2025-06-04 23:43:19,736 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:43:29] 2025-06-04 23:43:19,884 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:43:29] 2025-06-04 23:43:19,886 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:43:29] 2025-06-04 23:43:19,889 [wrapper] pilotpid: 3966672
[2025-06-05 01:43:29] 2025-06-04 23:43:19,891 [wrapper] Pilot exit status: 0
[2025-06-05 01:43:29] 2025-06-04 23:43:19,901 [wrapper] pandaids: 6677440505
[2025-06-05 01:43:29] 2025-06-04 23:43:19,950 [wrapper] cleanup supervisor_pilot 4131028 3966673
[2025-06-05 01:43:29] 2025-06-04 23:43:19,953 [wrapper] Test setup, not cleaning
[2025-06-05 01:43:29] 2025-06-04 23:43:19,956 [wrapper] apfmon messages muted
[2025-06-05 01:43:29] 2025-06-04 23:43:19,958 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:43:29] 2025-06-04 23:43:19,961 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:43:29]  *** Error codes and diagnostics ***
[2025-06-05 01:43:29]     "exeErrorCode": 0,
[2025-06-05 01:43:29]     "exeErrorDiag": "",
[2025-06-05 01:43:29]     "pilotErrorCode": 0,
[2025-06-05 01:43:29]     "pilotErrorDiag": "",
[2025-06-05 01:43:29]  *** Listing of results directory ***
[2025-06-05 01:43:29] total 392216
[2025-06-05 01:43:29] -rw-r--r-- 1 boinc boinc    495897 Jun  3 02:19 pilot3.tar.gz
[2025-06-05 01:43:29] -rwx------ 1 boinc boinc     37140 Jun  3 02:30 runpilot2-wrapper.sh
[2025-06-05 01:43:29] -rw-r--r-- 1 boinc boinc      5111 Jun  3 02:30 queuedata.json
[2025-06-05 01:43:29] -rw-r--r-- 1 boinc boinc       100 Jun  4 22:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:43:29] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 22:51 run_atlas
[2025-06-05 01:43:29] -rw-r--r-- 1 boinc boinc       105 Jun  4 22:51 job.xml
[2025-06-05 01:43:29] -rw-r--r-- 1 boinc boinc      6419 Jun  4 22:51 init_data.xml
[2025-06-05 01:43:29] -rw-r--r-- 2 boinc boinc 215678995 Jun  4 22:51 EVNT.45006593._000613.pool.root.1
[2025-06-05 01:43:29] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:51 start_atlas.sh
[2025-06-05 01:43:29] drwxrwx--x 2 boinc boinc      4096 Jun  4 22:51 shared
[2025-06-05 01:43:29] -rw-r--r-- 2 boinc boinc    508875 Jun  4 22:51 input.tar.gz
[2025-06-05 01:43:29] -rw-r--r-- 1 boinc boinc         0 Jun  4 22:51 boinc_lockfile
[2025-06-05 01:43:29] -rw-r--r-- 1 boinc boinc      2523 Jun  4 22:51 pandaJob.out
[2025-06-05 01:43:29] -rw------- 1 boinc boinc    987032 Jun  4 22:51 agis_schedconf.cvmfs.json
[2025-06-05 01:43:29] -rw------- 1 boinc boinc   1598969 Jun  4 22:51 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:43:29] drwx------ 4 boinc boinc      4096 Jun  4 22:51 pilot3
[2025-06-05 01:43:29] -rw------- 1 boinc boinc 179577545 Jun  5 01:42 HITS.45006595._015310.pool.root.1
[2025-06-05 01:43:29] -rw-r--r-- 1 boinc boinc       528 Jun  5 01:42 boinc_task_state.xml
[2025-06-05 01:43:29] -rw------- 1 boinc boinc      1036 Jun  5 01:42 memory_monitor_summary.json
[2025-06-05 01:43:29] -rw------- 1 boinc boinc    293532 Jun  5 01:42 log.45006595._015310.job.log.tgz.1
[2025-06-05 01:43:29] -rw------- 1 boinc boinc        95 Jun  5 01:43 pilot_heartbeat.json
[2025-06-05 01:43:29] -rw------- 1 boinc boinc      7730 Jun  5 01:43 heartbeat.json
[2025-06-05 01:43:29] -rw------- 1 boinc boinc      4364 Jun  5 01:43 pilotlog.txt
[2025-06-05 01:43:29] -rw------- 1 boinc boinc    973774 Jun  5 01:43 log.45006595._015310.job.log.1
[2025-06-05 01:43:29] -rw------- 1 boinc boinc       357 Jun  5 01:43 output.list
[2025-06-05 01:43:29] -rw-r--r-- 1 boinc boinc       620 Jun  5 01:43 runtime_log
[2025-06-05 01:43:29] -rw------- 1 boinc boinc   1290240 Jun  5 01:43 result.tar.gz
[2025-06-05 01:43:29] -rw-r--r-- 1 boinc boinc      9026 Jun  5 01:43 runtime_log.err
[2025-06-05 01:43:29] -rw------- 1 boinc boinc       664 Jun  5 01:43 Pe9NDmPjUg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0xWKDmTC9iTn.diag
[2025-06-05 01:43:29] -rw-r--r-- 1 boinc boinc        26 Jun  5 01:43 wrapper_checkpoint.txt
[2025-06-05 01:43:29] -rw-r--r-- 1 boinc boinc      8192 Jun  5 01:43 boinc_mmap_file
[2025-06-05 01:43:29] -rw-r--r-- 1 boinc boinc     20615 Jun  5 01:43 stderr.txt
[2025-06-05 01:43:29] HITS file was successfully produced:
[2025-06-05 01:43:29] -rw------- 1 boinc boinc 179577545 Jun  5 01:42 shared/HITS.pool.root.1
[2025-06-05 01:43:29]  *** Contents of shared directory: ***
[2025-06-05 01:43:29] total 387784
[2025-06-05 01:43:29] -rw-r--r-- 2 boinc boinc 215678995 Jun  4 22:51 ATLAS.root_0
[2025-06-05 01:43:29] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:51 start_atlas.sh
[2025-06-05 01:43:29] -rw-r--r-- 2 boinc boinc    508875 Jun  4 22:51 input.tar.gz
[2025-06-05 01:43:29] -rw------- 1 boinc boinc 179577545 Jun  5 01:42 HITS.pool.root.1
[2025-06-05 01:43:29] -rw------- 1 boinc boinc   1290240 Jun  5 01:43 result.tar.gz
01:43:31 (3960628): run_atlas exited; CPU time 39654.453403
01:43:31 (3960628): called boinc_finish(0)

</stderr_txt>
]]>

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