Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:48:06 (1178873): wrapper (7.7.26015): starting
16:48:06 (1178873): wrapper: running run_atlas (--nthreads 2)
[2025-06-03 16:48:06] Arguments: --nthreads 2
[2025-06-03 16:48:06] Threads: 2
[2025-06-03 16:48:06] Checking for CVMFS
[2025-06-03 16:48:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 16:48:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 16:48:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 16:48:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 16:48:06] 2.9.2.0 906415 1157 55060 146743 3 56 29154916 36864001 0 130560 0 735539 99.990 291395 65276 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-03 16:48:06] CVMFS is ok
[2025-06-03 16:48:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 16:48:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 16:48:06] Further information can be found at the LHC@home message board.
[2025-06-03 16:48:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 16:48:06] Checking for apptainer binary...
[2025-06-03 16:48:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 16:48:06] Running /usr/bin/apptainer --version
[2025-06-03 16:48:06] apptainer version 1.3.6-6.1
[2025-06-03 16:48:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 16:48:07] madmaxA275
[2025-06-03 16:48:07] apptainer works
[2025-06-03 16:48:07] Set ATHENA_PROC_NUMBER=2
[2025-06-03 16:48:07] Set ATHENA_CORE_NUMBER=2
[2025-06-03 16:48:07] Starting ATLAS job with PandaID=6677443555
[2025-06-03 16:48:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:39:07]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:39:07] 2025-06-03 16:38:41,882 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:39:07] 2025-06-03 16:38:44,385 | INFO     | monitor loop #514: job 0:6677443555 is in state 'finished'
[2025-06-03 18:39:07] 2025-06-03 16:38:44,385 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:39:07] 2025-06-03 16:38:46,888 | INFO     | monitor loop #515: job 0:6677443555 is in state 'finished'
[2025-06-03 18:39:07] 2025-06-03 16:38:46,890 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:39:07] 2025-06-03 16:38:48,184 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 18:39:07] 2025-06-03 16:38:48,184 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677443555/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:39:07] 2025-06-03 16:38:48,185 | INFO     | extracted standard info from prmon json
[2025-06-03 18:39:07] 2025-06-03 16:38:48,185 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:39:07] 2025-06-03 16:38:48,185 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:39:07] 2025-06-03 16:38:48,185 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:39:07] 2025-06-03 16:38:48,185 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:39:07] 2025-06-03 16:38:48,186 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:39:07] 2025-06-03 16:38:48,186 | INFO     | sum of square deviations: 390582207.0
[2025-06-03 18:39:07] 2025-06-03 16:38:48,186 | INFO     | sum of deviations: -1376385059.5000024
[2025-06-03 18:39:07] 2025-06-03 16:38:48,186 | INFO     | mean x: 1748965393.5
[2025-06-03 18:39:07] 2025-06-03 16:38:48,186 | INFO     | mean y: 2347627.712962963
[2025-06-03 18:39:07] 2025-06-03 16:38:48,186 | INFO     | -- intersect: 6165582393.79626
[2025-06-03 18:39:07] 2025-06-03 16:38:48,186 | INFO     | intersect: 6165582393.79626
[2025-06-03 18:39:07] 2025-06-03 16:38:48,186 | INFO     | chi2: 1.5792524440343556
[2025-06-03 18:39:07] 2025-06-03 16:38:48,186 | INFO     | sum of square deviations: 338804492.0
[2025-06-03 18:39:07] 2025-06-03 16:38:48,186 | INFO     | sum of deviations: -793139323.9999976
[2025-06-03 18:39:07] 2025-06-03 16:38:48,186 | INFO     | mean x: 1748965241.0
[2025-06-03 18:39:07] 2025-06-03 16:38:48,186 | INFO     | mean y: 2349315.339805825
[2025-06-03 18:39:07] 2025-06-03 16:38:48,186 | INFO     | -- intersect: 4096666662.66185
[2025-06-03 18:39:07] 2025-06-03 16:38:48,186 | INFO     | intersect: 4096666662.66185
[2025-06-03 18:39:07] 2025-06-03 16:38:48,187 | INFO     | chi2: 1.580658232334295
[2025-06-03 18:39:07] 2025-06-03 16:38:48,187 | INFO     | current chi2=1.580658232334295 (change=-0.08901605979777376 %)
[2025-06-03 18:39:07] 2025-06-03 16:38:48,187 | INFO     | right removable region: 102
[2025-06-03 18:39:07] 2025-06-03 16:38:48,187 | INFO     | sum of square deviations: 338804492.0
[2025-06-03 18:39:07] 2025-06-03 16:38:48,187 | INFO     | sum of deviations: -14044786522.0
[2025-06-03 18:39:07] 2025-06-03 16:38:48,187 | INFO     | mean x: 1748965546.0
[2025-06-03 18:39:07] 2025-06-03 16:38:48,187 | INFO     | mean y: 2383807.495145631
[2025-06-03 18:39:07] 2025-06-03 16:38:48,187 | INFO     | -- intersect: 72503924689.9672
[2025-06-03 18:39:07] 2025-06-03 16:38:48,187 | INFO     | intersect: 72503924689.9672
[2025-06-03 18:39:07] 2025-06-03 16:38:48,187 | INFO     | chi2: 0.12281820935639146
[2025-06-03 18:39:07] 2025-06-03 16:38:48,187 | INFO     | current chi2=0.12281820935639146 (change=92.2230160339255 %)
[2025-06-03 18:39:07] 2025-06-03 16:38:48,187 | INFO     | sum of square deviations: 291817564.5
[2025-06-03 18:39:07] 2025-06-03 16:38:48,187 | INFO     | sum of deviations: -9471955377.0
[2025-06-03 18:39:07] 2025-06-03 16:38:48,187 | INFO     | mean x: 1748965698.5
[2025-06-03 18:39:07] 2025-06-03 16:38:48,187 | INFO     | mean y: 2368949.8163265307
[2025-06-03 18:39:07] 2025-06-03 16:38:48,187 | INFO     | -- intersect: 56771141866.141716
[2025-06-03 18:39:07] 2025-06-03 16:38:48,187 | INFO     | intersect: 56771141866.141716
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | chi2: 0.09529693303296244
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | current chi2=0.09529693303296244 (change=22.40814002064492 %)
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | left removable region: 20
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | sum of square deviations: 170944600.5
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | sum of deviations: -3025267397.4999995
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | mean x: 1748965820.5
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | mean y: 2348498.1097560977
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | -- intersect: 30954418704.62375
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | intersect: 30954418704.62375
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | chi2: 0.05611045759307742
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | -- intersect: 30954418704.62375
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | current memory leak: -17.70 B/s (using 82 data points, chi2=0.06)
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | ..............................
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | . Timing measurements:
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | . get job = 0 s
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | . initial setup = 1 s
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | . payload setup = 8 s
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | . stage-in = 0 s
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | . payload execution = 6585 s
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | . stage-out = 0 s
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | . log creation = 0 s
[2025-06-03 18:39:07] 2025-06-03 16:38:48,188 | INFO     | ..............................
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | 
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | job summary report
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | --------------------------------------------------
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | PanDA job id: 6677443555
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | task id: 45006595
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | errors: (none)
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | pilot state: finished 
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | transexitcode: 0
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | exeerrorcode: 0
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | exeerrordiag: 
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | exitcode: 0
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | exitmsg: OK
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | cpuconsumptiontime: 12819 s
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | nevents: 400
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | neventsw: 0
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | pid: 1188961
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | pgrp: 1188961
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | corecount: 2
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | event service: False
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | sizes: {0: 2405185, 6: 2405391, 11: 2405419, 6597: 2432488, 6598: 2441490, 6609: 2441604}
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | --------------------------------------------------
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | 
[2025-06-03 18:39:07] 2025-06-03 16:38:48,219 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-03 18:39:07] 2025-06-03 16:38:48,230 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:39:07] 2025-06-03 16:38:48,230 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:39:07] 2025-06-03 16:38:48,230 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:39:07] 2025-06-03 16:38:48,230 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:39:07] 2025-06-03 16:38:48,230 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:39:07] 2025-06-03 16:38:48,230 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:39:07] 2025-06-03 16:38:48,230 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:39:07] 2025-06-03 16:38:48,230 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:39:07] 2025-06-03 16:38:48,230 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:39:07] 2025-06-03 16:38:48,230 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:39:07] 2025-06-03 16:38:48,230 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:39:07] 2025-06-03 16:38:48,230 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:39:07] 2025-06-03 16:38:48,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:39:07] 2025-06-03 16:38:48,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:39:07] 2025-06-03 16:38:48,230 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:39:07] 2025-06-03 16:38:48,230 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:39:07] 2025-06-03 16:38:48,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:39:07] 2025-06-03 16:38:48,231 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:39:07] 2025-06-03 16:38:48,231 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:39:07] 2025-06-03 16:38:48,231 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:39:07] 2025-06-03 16:38:48,231 | INFO     | job 6677443555 has completed (purged errors)
[2025-06-03 18:39:07] 2025-06-03 16:38:48,231 | INFO     | overall cleanup function is called
[2025-06-03 18:39:07] 2025-06-03 16:38:48,890 | INFO     | PID=1182496 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 18:39:07] 2025-06-03 16:38:49,237 | INFO     | --- collectZombieJob: --- 10, [1188961]
[2025-06-03 18:39:07] 2025-06-03 16:38:49,237 | INFO     | zombie collector waiting for pid 1188961
[2025-06-03 18:39:07] 2025-06-03 16:38:49,237 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:39:07] 2025-06-03 16:38:49,238 | INFO     | collected zombie processes
[2025-06-03 18:39:07] 2025-06-03 16:38:49,238 | INFO     | will attempt to kill all subprocesses of pid=1188961
[2025-06-03 18:39:07] 2025-06-03 16:38:49,269 | INFO     | process IDs to be killed: [1188961] (in reverse order)
[2025-06-03 18:39:07] 2025-06-03 16:38:49,291 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:39:07] 2025-06-03 16:38:49,291 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:39:07] 2025-06-03 16:38:49,292 | INFO     | did not find any defunct processes belonging to 1188961
[2025-06-03 18:39:07] 2025-06-03 16:38:49,292 | INFO     | did not find any defunct processes belonging to 1188961
[2025-06-03 18:39:07] 2025-06-03 16:38:49,292 | INFO     | ready for new job
[2025-06-03 18:39:07] 2025-06-03 16:38:49,292 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:39:07] 2025-06-03 16:38:49,293 | INFO     | **************************************
[2025-06-03 18:39:07] 2025-06-03 16:38:49,293 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:39:07] 2025-06-03 16:38:49,293 | INFO     | **************************************
[2025-06-03 18:39:07] 2025-06-03 16:38:49,293 | INFO     | 
[2025-06-03 18:39:07] 2025-06-03 16:38:49,293 | INFO     | architecture information:
[2025-06-03 18:39:07] 2025-06-03 16:38:49,293 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:39:07] 2025-06-03 16:38:49,302 | INFO     | cat /etc/os-release:
[2025-06-03 18:39:07] NAME="CentOS Linux"
[2025-06-03 18:39:07] VERSION="7 (Core)"
[2025-06-03 18:39:07] ID="centos"
[2025-06-03 18:39:07] ID_LIKE="rhel fedora"
[2025-06-03 18:39:07] VERSION_ID="7"
[2025-06-03 18:39:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:39:07] ANSI_COLOR="0;31"
[2025-06-03 18:39:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:39:07] HOME_URL="https://www.centos.org/"
[2025-06-03 18:39:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:39:07] 
[2025-06-03 18:39:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:39:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:39:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:39:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:39:07] 
[2025-06-03 18:39:07] 2025-06-03 16:38:49,302 | INFO     | **************************************
[2025-06-03 18:39:07] 2025-06-03 16:38:49,805 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-03 18:39:07] 2025-06-03 16:38:49,818 | INFO     | sufficient remaining disk space (250561429504 B)
[2025-06-03 18:39:07] 2025-06-03 16:38:49,818 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:39:07] 2025-06-03 16:38:49,818 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:39:07] 2025-06-03 16:38:49,818 | INFO     | update_server=False
[2025-06-03 18:39:07] 2025-06-03 16:38:49,818 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:39:07] 2025-06-03 16:38:49,818 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 18:39:07] 2025-06-03 16:38:49,818 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:39:07] 2025-06-03 16:38:49,818 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:39:07] 2025-06-03 16:38:49,818 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:39:07] 2025-06-03 16:38:49,818 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:39:07] 2025-06-03 16:38:49,893 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:39:07] 2025-06-03 16:38:50,395 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:39:07] 2025-06-03 16:38:50,396 | INFO     | aborting loop
[2025-06-03 18:39:07] 2025-06-03 16:38:50,522 | INFO     | all job control threads have been joined
[2025-06-03 18:39:07] 2025-06-03 16:38:50,579 | INFO     | all payload control threads have been joined
[2025-06-03 18:39:07] 2025-06-03 16:38:50,607 | INFO     | all data control threads have been joined
[2025-06-03 18:39:07] 2025-06-03 16:38:50,819 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:39:07] 2025-06-03 16:38:50,820 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:39:07] 2025-06-03 16:38:51,402 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:39:07] 2025-06-03 16:38:51,405 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:39:07] 2025-06-03 16:38:51,528 | INFO     | [job] control thread has finished
[2025-06-03 18:39:07] 2025-06-03 16:38:51,585 | INFO     | [payload] control thread has finished
[2025-06-03 18:39:07] 2025-06-03 16:38:51,613 | INFO     | [data] control thread has finished
[2025-06-03 18:39:07] 2025-06-03 16:38:51,899 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:39:07] 2025-06-03 16:38:52,013 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:39:07] 2025-06-03 16:38:52,085 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:39:07] 2025-06-03 16:38:52,139 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:39:07] 2025-06-03 16:38:52,236 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:39:07] 2025-06-03 16:38:52,238 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:39:07] 2025-06-03 16:38:52,238 | INFO     | [job] validate thread has finished
[2025-06-03 18:39:07] 2025-06-03 16:38:52,279 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:39:07] 2025-06-03 16:38:56,283 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:39:07] 2025-06-03 16:39:00,471 | INFO     | job.realtimelogging is not enabled
[2025-06-03 18:39:07] 2025-06-03 16:39:01,477 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:39:07] 2025-06-03 16:39:02,278 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139818743916352)>', '<ExcThread(monitor, started 139818382104320)>']
[2025-06-03 18:39:07] 2025-06-03 16:39:02,883 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:39:07] 2025-06-03 16:39:02,883 | INFO     | [monitor] control thread has ended
[2025-06-03 18:39:07] 2025-06-03 16:39:07,304 | INFO     | all workflow threads have been joined
[2025-06-03 18:39:07] 2025-06-03 16:39:07,305 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:39:07] 2025-06-03 16:39:07,306 | INFO     | traces error code: 0
[2025-06-03 18:39:07] 2025-06-03 16:39:07,306 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:39:07] 2025-06-03 16:39:07,349 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:39:07] 2025-06-03 16:39:07,351 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:39:07] 2025-06-03 16:39:07,354 [wrapper] pilotpid: 1182496
[2025-06-03 18:39:07] 2025-06-03 16:39:07,356 [wrapper] Pilot exit status: 0
[2025-06-03 18:39:07] 2025-06-03 16:39:07,362 [wrapper] pandaids: 6677443555
[2025-06-03 18:39:07] 2025-06-03 16:39:07,374 [wrapper] cleanup supervisor_pilot 1202863 1182497
[2025-06-03 18:39:07] 2025-06-03 16:39:07,376 [wrapper] Test setup, not cleaning
[2025-06-03 18:39:07] 2025-06-03 16:39:07,378 [wrapper] apfmon messages muted
[2025-06-03 18:39:07] 2025-06-03 16:39:07,380 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:39:07] 2025-06-03 16:39:07,382 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:39:07]  *** Error codes and diagnostics ***
[2025-06-03 18:39:07]     "exeErrorCode": 0,
[2025-06-03 18:39:07]     "exeErrorDiag": "",
[2025-06-03 18:39:07]     "pilotErrorCode": 0,
[2025-06-03 18:39:07]     "pilotErrorDiag": "",
[2025-06-03 18:39:07]  *** Listing of results directory ***
[2025-06-03 18:39:07] total 388508
[2025-06-03 18:39:07] -rw-r--r-- 1 boinc boinc    495897 Jun  3 03:51 pilot3.tar.gz
[2025-06-03 18:39:07] -rw-r--r-- 1 boinc boinc      5111 Jun  3 04:18 queuedata.json
[2025-06-03 18:39:07] -rwx------ 1 boinc boinc     37140 Jun  3 04:19 runpilot2-wrapper.sh
[2025-06-03 18:39:07] -rw-r--r-- 1 boinc boinc       100 Jun  3 16:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:39:07] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 16:48 run_atlas
[2025-06-03 18:39:07] -rw-r--r-- 1 boinc boinc       105 Jun  3 16:48 job.xml
[2025-06-03 18:39:07] -rw-r--r-- 2 boinc boinc 214616950 Jun  3 16:48 EVNT.45006593._000683.pool.root.1
[2025-06-03 18:39:07] -rw-r--r-- 1 boinc boinc      6692 Jun  3 16:48 init_data.xml
[2025-06-03 18:39:07] drwxrwx--x 2 boinc boinc      4096 Jun  3 16:48 shared
[2025-06-03 18:39:07] -rw-r--r-- 2 boinc boinc    508881 Jun  3 16:48 input.tar.gz
[2025-06-03 18:39:07] -rw-r--r-- 2 boinc boinc     15093 Jun  3 16:48 start_atlas.sh
[2025-06-03 18:39:07] -rw-r--r-- 1 boinc boinc         0 Jun  3 16:48 boinc_lockfile
[2025-06-03 18:39:07] -rw-r--r-- 1 boinc boinc      2524 Jun  3 16:48 pandaJob.out
[2025-06-03 18:39:07] -rw------- 1 boinc boinc    982724 Jun  3 16:48 agis_schedconf.cvmfs.json
[2025-06-03 18:39:07] -rw------- 1 boinc boinc   1603667 Jun  3 16:48 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:39:07] drwx------ 4 boinc boinc      4096 Jun  3 16:48 pilot3
[2025-06-03 18:39:07] -rw------- 1 boinc boinc 177677961 Jun  3 18:38 HITS.45006595._017063.pool.root.1
[2025-06-03 18:39:07] -rw-r--r-- 1 boinc boinc       529 Jun  3 18:38 boinc_task_state.xml
[2025-06-03 18:39:07] -rw------- 1 boinc boinc      1030 Jun  3 18:38 memory_monitor_summary.json
[2025-06-03 18:39:07] -rw------- 1 boinc boinc    225162 Jun  3 18:38 log.45006595._017063.job.log.tgz.1
[2025-06-03 18:39:07] -rw------- 1 boinc boinc      7663 Jun  3 18:38 heartbeat.json
[2025-06-03 18:39:07] -rw------- 1 boinc boinc        95 Jun  3 18:38 pilot_heartbeat.json
[2025-06-03 18:39:07] -rw-r--r-- 1 boinc boinc      8192 Jun  3 18:39 boinc_mmap_file
[2025-06-03 18:39:07] -rw-r--r-- 1 boinc boinc        27 Jun  3 18:39 wrapper_checkpoint.txt
[2025-06-03 18:39:07] -rw------- 1 boinc boinc      4552 Jun  3 18:39 pilotlog.txt
[2025-06-03 18:39:07] -rw------- 1 boinc boinc    630162 Jun  3 18:39 log.45006595._017063.job.log.1
[2025-06-03 18:39:07] -rw------- 1 boinc boinc       357 Jun  3 18:39 output.list
[2025-06-03 18:39:07] -rw-r--r-- 1 boinc boinc       620 Jun  3 18:39 runtime_log
[2025-06-03 18:39:07] -rw------- 1 boinc boinc    870400 Jun  3 18:39 result.tar.gz
[2025-06-03 18:39:07] -rw-r--r-- 1 boinc boinc      8753 Jun  3 18:39 runtime_log.err
[2025-06-03 18:39:07] -rw------- 1 boinc boinc       663 Jun  3 18:39 GNNNDmVQWg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1WhKDmQOPJan.diag
[2025-06-03 18:39:07] -rw-r--r-- 1 boinc boinc     21131 Jun  3 18:39 stderr.txt
[2025-06-03 18:39:07] HITS file was successfully produced:
[2025-06-03 18:39:07] -rw------- 1 boinc boinc 177677961 Jun  3 18:38 shared/HITS.pool.root.1
[2025-06-03 18:39:07]  *** Contents of shared directory: ***
[2025-06-03 18:39:07] total 384480
[2025-06-03 18:39:07] -rw-r--r-- 2 boinc boinc 214616950 Jun  3 16:48 ATLAS.root_0
[2025-06-03 18:39:07] -rw-r--r-- 2 boinc boinc    508881 Jun  3 16:48 input.tar.gz
[2025-06-03 18:39:07] -rw-r--r-- 2 boinc boinc     15093 Jun  3 16:48 start_atlas.sh
[2025-06-03 18:39:07] -rw------- 1 boinc boinc 177677961 Jun  3 18:38 HITS.pool.root.1
[2025-06-03 18:39:07] -rw------- 1 boinc boinc    870400 Jun  3 18:39 result.tar.gz
18:39:09 (1178873): run_atlas exited; CPU time 12846.049511
18:39:09 (1178873): called boinc_finish(0)

</stderr_txt>
]]>

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