Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:39:06 (22112): wrapper (7.7.26015): starting
14:39:06 (22112): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:39:06] Arguments: --nthreads 8
[2025-06-03 14:39:06] Threads: 8
[2025-06-03 14:39:06] Checking for CVMFS
[2025-06-03 14:39:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:39:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:39:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:39:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:39:07] 2.11.2.0 555 31891 100256 146741 2 262 13629626 25165824 3668 130560 0 16796801 99.808 20088871 2710 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 14:39:07] CVMFS is ok
[2025-06-03 14:39:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:39:07] Checking for apptainer binary...
[2025-06-03 14:39:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:39:07] Running /usr/bin/apptainer --version
[2025-06-03 14:39:07] apptainer version 1.3.2-1.el7
[2025-06-03 14:39:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:39:08] cg-vwn340.simple-grid.lan
[2025-06-03 14:39:08] apptainer works
[2025-06-03 14:39:08] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:39:08] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:39:08] Starting ATLAS job with PandaID=6677457624
[2025-06-03 14:39:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:05:37]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:05:37] 2025-06-03 16:23:59,734 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:05:37] 2025-06-03 16:23:59,734 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:05:37] 2025-06-03 16:23:59,739 | INFO     | fitting pss+swap vs Time
[2025-06-03 20:05:37] 2025-06-03 16:23:59,743 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 20:05:37] 2025-06-03 16:23:59,745 | INFO     | sum of deviations: -16794557575.999998
[2025-06-03 20:05:37] 2025-06-03 16:23:59,745 | INFO     | mean x: 1748961072.5
[2025-06-03 20:05:37] 2025-06-03 16:23:59,745 | INFO     | mean y: 2493623.8440366974
[2025-06-03 20:05:37] 2025-06-03 16:23:59,745 | INFO     | -- intersect: 9145940471.089178
[2025-06-03 20:05:37] 2025-06-03 16:23:59,746 | INFO     | intersect: 9145940471.089178
[2025-06-03 20:05:37] 2025-06-03 16:23:59,746 | INFO     | chi2: 2.991433602346847
[2025-06-03 20:05:37] 2025-06-03 16:23:59,747 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 20:05:37] 2025-06-03 16:23:59,748 | INFO     | sum of deviations: -1897354919.0000045
[2025-06-03 20:05:37] 2025-06-03 16:23:59,749 | INFO     | mean x: 1748960920.0
[2025-06-03 20:05:37] 2025-06-03 16:23:59,749 | INFO     | mean y: 2503952.441314554
[2025-06-03 20:05:37] 2025-06-03 16:23:59,749 | INFO     | -- intersect: 1109946031.6804497
[2025-06-03 20:05:37] 2025-06-03 16:23:59,749 | INFO     | intersect: 1109946031.6804497
[2025-06-03 20:05:37] 2025-06-03 16:23:59,749 | INFO     | chi2: 2.2300649406595316
[2025-06-03 20:05:37] 2025-06-03 16:23:59,749 | INFO     | current chi2=2.2300649406595316 (change=25.451631655471292 %)
[2025-06-03 20:05:37] 2025-06-03 16:23:59,750 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 20:05:37] 2025-06-03 16:23:59,754 | INFO     | sum of deviations: -1619281142.499998
[2025-06-03 20:05:37] 2025-06-03 16:23:59,754 | INFO     | mean x: 1748960767.5
[2025-06-03 20:05:37] 2025-06-03 16:23:59,754 | INFO     | mean y: 2504158.1971153845
[2025-06-03 20:05:37] 2025-06-03 16:23:59,754 | INFO     | -- intersect: 1017452492.8893807
[2025-06-03 20:05:37] 2025-06-03 16:23:59,754 | INFO     | intersect: 1017452492.8893807
[2025-06-03 20:05:37] 2025-06-03 16:23:59,755 | INFO     | chi2: 2.230416613637823
[2025-06-03 20:05:37] 2025-06-03 16:23:59,755 | INFO     | current chi2=2.230416613637823 (change=-0.015769629479378423 %)
[2025-06-03 20:05:37] 2025-06-03 16:23:59,755 | INFO     | right removable region: 207
[2025-06-03 20:05:37] 2025-06-03 16:23:59,755 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 20:05:37] 2025-06-03 16:23:59,757 | INFO     | sum of deviations: -59954437552.00001
[2025-06-03 20:05:37] 2025-06-03 16:23:59,757 | INFO     | mean x: 1748961225.0
[2025-06-03 20:05:37] 2025-06-03 16:23:59,757 | INFO     | mean y: 2523857.3051643195
[2025-06-03 20:05:37] 2025-06-03 16:23:59,758 | INFO     | -- intersect: 34996545216.23711
[2025-06-03 20:05:37] 2025-06-03 16:23:59,761 | INFO     | intersect: 34996545216.23711
[2025-06-03 20:05:37] 2025-06-03 16:23:59,762 | INFO     | chi2: 1.011214266615809
[2025-06-03 20:05:37] 2025-06-03 16:23:59,762 | INFO     | current chi2=1.011214266615809 (change=66.19633256033198 %)
[2025-06-03 20:05:37] 2025-06-03 16:23:59,762 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 20:05:37] 2025-06-03 16:23:59,764 | INFO     | sum of deviations: -60408906187.500015
[2025-06-03 20:05:37] 2025-06-03 16:23:59,764 | INFO     | mean x: 1748961377.5
[2025-06-03 20:05:37] 2025-06-03 16:23:59,764 | INFO     | mean y: 2524150.264423077
[2025-06-03 20:05:37] 2025-06-03 16:23:59,764 | INFO     | -- intersect: 37866202365.652885
[2025-06-03 20:05:37] 2025-06-03 16:23:59,765 | INFO     | intersect: 37866202365.652885
[2025-06-03 20:05:37] 2025-06-03 16:23:59,765 | INFO     | chi2: 0.9844353465257895
[2025-06-03 20:05:37] 2025-06-03 16:23:59,765 | INFO     | current chi2=0.9844353465257895 (change=2.648194450384837 %)
[2025-06-03 20:05:37] 2025-06-03 16:23:59,765 | INFO     | left removable region: 20
[2025-06-03 20:05:37] 2025-06-03 16:23:59,769 | INFO     | sum of square deviations: 2027639878.0
[2025-06-03 20:05:37] 2025-06-03 16:23:59,770 | INFO     | sum of deviations: -32444688296.000004
[2025-06-03 20:05:37] 2025-06-03 16:23:59,771 | INFO     | mean x: 1748961347.0
[2025-06-03 20:05:37] 2025-06-03 16:23:59,771 | INFO     | mean y: 2526922.1336898394
[2025-06-03 20:05:37] 2025-06-03 16:23:59,771 | INFO     | -- intersect: 27988021960.40365
[2025-06-03 20:05:37] 2025-06-03 16:23:59,771 | INFO     | intersect: 27988021960.40365
[2025-06-03 20:05:37] 2025-06-03 16:23:59,771 | INFO     | chi2: 0.17417129833205564
[2025-06-03 20:05:37] 2025-06-03 16:23:59,772 | INFO     | -- intersect: 27988021960.40365
[2025-06-03 20:05:37] 2025-06-03 16:23:59,772 | INFO     | current memory leak: -16.00 B/s (using 187 data points, chi2=0.17)
[2025-06-03 20:05:37] 2025-06-03 16:23:59,773 | INFO     | ..............................
[2025-06-03 20:05:37] 2025-06-03 16:23:59,773 | INFO     | . Timing measurements:
[2025-06-03 20:05:37] 2025-06-03 16:23:59,773 | INFO     | . get job = 0 s
[2025-06-03 20:05:37] 2025-06-03 16:23:59,773 | INFO     | . initial setup = 2 s
[2025-06-03 20:05:37] 2025-06-03 16:23:59,773 | INFO     | . payload setup = 34 s
[2025-06-03 20:05:37] 2025-06-03 16:23:59,773 | INFO     | . stage-in = 0 s
[2025-06-03 20:05:37] 2025-06-03 16:23:59,773 | INFO     | . payload execution = 13303 s
[2025-06-03 20:05:37] 2025-06-03 16:23:59,774 | INFO     | . stage-out = 3 s
[2025-06-03 20:05:37] 2025-06-03 16:23:59,774 | INFO     | . log creation = 0 s
[2025-06-03 20:05:37] 2025-06-03 16:23:59,774 | INFO     | ..............................
[2025-06-03 20:05:37] 2025-06-03 16:23:59,914 | INFO     | 
[2025-06-03 20:05:37] 2025-06-03 16:23:59,915 | INFO     | job summary report
[2025-06-03 20:05:37] 2025-06-03 16:23:59,915 | INFO     | --------------------------------------------------
[2025-06-03 20:05:37] 2025-06-03 16:23:59,915 | INFO     | PanDA job id: 6677457624
[2025-06-03 20:05:37] 2025-06-03 16:23:59,915 | INFO     | task id: 45006595
[2025-06-03 20:05:37] 2025-06-03 16:23:59,915 | INFO     | errors: (none)
[2025-06-03 20:05:37] 2025-06-03 16:23:59,915 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:05:37] 2025-06-03 16:23:59,915 | INFO     | pilot state: finished 
[2025-06-03 20:05:37] 2025-06-03 16:23:59,915 | INFO     | transexitcode: 0
[2025-06-03 20:05:37] 2025-06-03 16:23:59,916 | INFO     | exeerrorcode: 0
[2025-06-03 20:05:37] 2025-06-03 16:23:59,916 | INFO     | exeerrordiag: 
[2025-06-03 20:05:37] 2025-06-03 16:23:59,916 | INFO     | exitcode: 0
[2025-06-03 20:05:37] 2025-06-03 16:23:59,916 | INFO     | exitmsg: OK
[2025-06-03 20:05:37] 2025-06-03 16:23:59,916 | INFO     | cpuconsumptiontime: 50848 s
[2025-06-03 20:05:37] 2025-06-03 16:23:59,916 | INFO     | nevents: 400
[2025-06-03 20:05:37] 2025-06-03 16:23:59,916 | INFO     | neventsw: 0
[2025-06-03 20:05:37] 2025-06-03 16:23:59,916 | INFO     | pid: 13281
[2025-06-03 20:05:37] 2025-06-03 16:23:59,916 | INFO     | pgrp: 13281
[2025-06-03 20:05:37] 2025-06-03 16:23:59,916 | INFO     | corecount: 8
[2025-06-03 20:05:37] 2025-06-03 16:23:59,917 | INFO     | event service: False
[2025-06-03 20:05:37] 2025-06-03 16:23:59,917 | INFO     | sizes: {0: 2404961, 1: 2405160, 9: 2405366, 12: 2405394, 13341: 2434902, 13342: 2434901, 13346: 2444028, 13347: 2444084, 13444: 2444254}
[2025-06-03 20:05:37] 2025-06-03 16:23:59,917 | INFO     | --------------------------------------------------
[2025-06-03 20:05:37] 2025-06-03 16:23:59,917 | INFO     | 
[2025-06-03 20:05:37] 2025-06-03 16:23:59,917 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-03 20:05:37] 2025-06-03 16:24:00,328 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:05:37] 2025-06-03 16:24:00,329 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:05:37] 2025-06-03 16:24:00,329 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:05:37] 2025-06-03 16:24:00,329 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:05:37] 2025-06-03 16:24:00,329 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:05:37] 2025-06-03 16:24:00,329 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:05:37] 2025-06-03 16:24:00,330 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:05:37] 2025-06-03 16:24:00,330 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:05:37] 2025-06-03 16:24:00,330 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:05:37] 2025-06-03 16:24:00,330 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:05:37] 2025-06-03 16:24:00,330 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:05:37] 2025-06-03 16:24:00,330 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:05:37] 2025-06-03 16:24:00,330 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:05:37] 2025-06-03 16:24:00,330 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:05:37] 2025-06-03 16:24:00,330 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:05:37] 2025-06-03 16:24:00,331 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:05:37] 2025-06-03 16:24:00,331 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:05:37] 2025-06-03 16:24:00,331 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:05:37] 2025-06-03 16:24:00,331 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:05:37] 2025-06-03 16:24:00,331 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:05:37] 2025-06-03 16:24:00,331 | INFO     | job 6677457624 has completed (purged errors)
[2025-06-03 20:05:37] 2025-06-03 16:24:00,332 | INFO     | overall cleanup function is called
[2025-06-03 20:05:37] 2025-06-03 16:24:01,341 | INFO     | --- collectZombieJob: --- 10, [13281]
[2025-06-03 20:05:37] 2025-06-03 16:24:01,341 | INFO     | zombie collector waiting for pid 13281
[2025-06-03 20:05:37] 2025-06-03 16:24:01,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:05:37] 2025-06-03 16:24:01,342 | INFO     | collected zombie processes
[2025-06-03 20:05:37] 2025-06-03 16:24:01,342 | INFO     | will attempt to kill all subprocesses of pid=13281
[2025-06-03 20:05:37] 2025-06-03 16:24:01,524 | INFO     | process IDs to be killed: [13281] (in reverse order)
[2025-06-03 20:05:37] 2025-06-03 16:24:02,442 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:05:37] 2025-06-03 16:24:02,443 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:05:37] 2025-06-03 16:24:02,449 | INFO     | did not find any defunct processes belonging to 13281
[2025-06-03 20:05:37] 2025-06-03 16:24:02,452 | INFO     | did not find any defunct processes belonging to 13281
[2025-06-03 20:05:37] 2025-06-03 16:24:02,453 | INFO     | ready for new job
[2025-06-03 20:05:37] 2025-06-03 16:24:02,453 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:05:37] 2025-06-03 16:24:02,455 | INFO     | **************************************
[2025-06-03 20:05:37] 2025-06-03 16:24:02,455 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:05:37] 2025-06-03 16:24:02,455 | INFO     | **************************************
[2025-06-03 20:05:37] 2025-06-03 16:24:02,456 | INFO     | 
[2025-06-03 20:05:37] 2025-06-03 16:24:02,456 | INFO     | pilot is running in a VM
[2025-06-03 20:05:37] 2025-06-03 16:24:02,456 | INFO     | architecture information:
[2025-06-03 20:05:37] 2025-06-03 16:24:02,462 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:05:37] 2025-06-03 16:24:02,679 | INFO     | cat /etc/os-release:
[2025-06-03 20:05:37] NAME="CentOS Linux"
[2025-06-03 20:05:37] VERSION="7 (Core)"
[2025-06-03 20:05:37] ID="centos"
[2025-06-03 20:05:37] ID_LIKE="rhel fedora"
[2025-06-03 20:05:37] VERSION_ID="7"
[2025-06-03 20:05:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:05:37] ANSI_COLOR="0;31"
[2025-06-03 20:05:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:05:37] HOME_URL="https://www.centos.org/"
[2025-06-03 20:05:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:05:37] 
[2025-06-03 20:05:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:05:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:05:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:05:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:05:37] 
[2025-06-03 20:05:37] 2025-06-03 16:24:02,680 | INFO     | **************************************
[2025-06-03 20:05:37] 2025-06-03 16:24:03,183 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-03 20:05:37] 2025-06-03 16:24:03,372 | INFO     | sufficient remaining disk space (496778608640 B)
[2025-06-03 20:05:37] 2025-06-03 16:24:03,372 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:05:37] 2025-06-03 16:24:03,372 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:05:37] 2025-06-03 16:24:03,372 | INFO     | update_server=False
[2025-06-03 20:05:37] 2025-06-03 16:24:03,372 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:05:37] 2025-06-03 16:24:03,376 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 20:05:37] 2025-06-03 16:24:03,376 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:05:37] 2025-06-03 16:24:03,377 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:05:37] 2025-06-03 16:24:03,377 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:05:37] 2025-06-03 16:24:03,377 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:05:37] 2025-06-03 16:24:03,383 | INFO     | all data control threads have been joined
[2025-06-03 20:05:37] 2025-06-03 16:24:03,489 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 20:05:37] 2025-06-03 16:24:03,489 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 20:05:37] 2025-06-03 16:24:03,489 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:05:37] 2025-06-03 16:24:03,489 | INFO     | will abort loop
[2025-06-03 20:05:37] 2025-06-03 16:24:03,547 | INFO     | all job control threads have been joined
[2025-06-03 20:05:37] 2025-06-03 16:24:03,978 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:05:37] 2025-06-03 16:24:04,098 | INFO     | all payload control threads have been joined
[2025-06-03 20:05:37] 2025-06-03 16:24:04,379 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:05:37] 2025-06-03 16:24:04,389 | INFO     | [data] control thread has finished
[2025-06-03 20:05:37] 2025-06-03 16:24:04,495 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:05:37] 2025-06-03 16:24:04,553 | INFO     | [job] control thread has finished
[2025-06-03 20:05:37] 2025-06-03 16:24:04,907 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:05:37] 2025-06-03 16:24:04,914 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:05:37] 2025-06-03 16:24:04,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:05:37] 2025-06-03 16:24:04,939 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:05:37] 2025-06-03 16:24:04,945 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:05:37] 2025-06-03 16:24:05,105 | INFO     | [payload] control thread has finished
[2025-06-03 20:05:37] 2025-06-03 16:24:05,388 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:05:37] 2025-06-03 16:24:05,518 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:05:37] 2025-06-03 16:24:05,604 | INFO     | [job] validate thread has finished
[2025-06-03 20:05:37] 2025-06-03 16:24:05,825 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:05:37] 2025-06-03 16:24:05,935 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:05:37] 2025-06-03 16:24:07,987 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:05:37] 2025-06-03 16:24:13,784 | INFO     | job.realtimelogging is not enabled
[2025-06-03 20:05:37] 2025-06-03 16:24:14,790 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:05:37] 2025-06-03 16:24:15,842 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140330147944256)>', '<ExcThread(monitor, started 140329198024448)>']
[2025-06-03 20:05:37] 2025-06-03 16:24:16,455 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:05:37] 2025-06-03 16:24:16,455 | INFO     | [monitor] control thread has ended
[2025-06-03 20:05:37] 2025-06-03 16:24:20,868 | INFO     | all workflow threads have been joined
[2025-06-03 20:05:37] 2025-06-03 16:24:20,868 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:05:37] 2025-06-03 16:24:20,869 | INFO     | traces error code: 0
[2025-06-03 20:05:37] 2025-06-03 16:24:20,869 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:05:37] 2025-06-03 16:24:21,271 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:05:37] 2025-06-03 16:24:21,334 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:05:37] 2025-06-03 16:24:21,439 [wrapper] pilotpid: 27798
[2025-06-03 20:05:37] 2025-06-03 16:24:21,540 [wrapper] Pilot exit status: 0
[2025-06-03 20:05:37] 2025-06-03 16:24:22,006 [wrapper] pandaids: 6677457624
[2025-06-03 20:05:37] 2025-06-03 16:24:22,668 [wrapper] cleanup supervisor_pilot 32083 27799
[2025-06-03 20:05:37] 2025-06-03 16:24:22,782 [wrapper] Test setup, not cleaning
[2025-06-03 20:05:37] 2025-06-03 16:24:22,844 [wrapper] apfmon messages muted
[2025-06-03 20:05:37] 2025-06-03 16:24:22,906 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:05:37] 2025-06-03 16:24:22,990 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:05:37]  *** Error codes and diagnostics ***
[2025-06-03 20:05:37]     "exeErrorCode": 0,
[2025-06-03 20:05:37]     "exeErrorDiag": "",
[2025-06-03 20:05:37]     "pilotErrorCode": 0,
[2025-06-03 20:05:37]     "pilotErrorDiag": "",
[2025-06-03 20:05:37]  *** Listing of results directory ***
[2025-06-03 20:05:37] total 397300
[2025-06-03 20:05:37] -rw-r--r--. 1 boinc boinc    495897 Jun  3 06:08 pilot3.tar.gz
[2025-06-03 20:05:37] -rw-r--r--. 1 boinc boinc      5111 Jun  3 06:17 queuedata.json
[2025-06-03 20:05:37] -rwx------. 1 boinc boinc     37140 Jun  3 06:17 runpilot2-wrapper.sh
[2025-06-03 20:05:37] -rw-r--r--. 1 boinc boinc       100 Jun  3 14:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:05:37] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 14:39 run_atlas
[2025-06-03 20:05:37] -rw-r--r--. 1 boinc boinc       105 Jun  3 14:39 job.xml
[2025-06-03 20:05:37] -rw-r--r--. 2 boinc boinc 219038417 Jun  3 14:39 EVNT.45006593._000773.pool.root.1
[2025-06-03 20:05:37] drwxrwx--x. 2 boinc boinc        68 Jun  3 14:39 shared
[2025-06-03 20:05:37] -rw-r--r--. 2 boinc boinc    508878 Jun  3 14:39 input.tar.gz
[2025-06-03 20:05:37] -rw-r--r--. 1 boinc boinc      6391 Jun  3 14:39 init_data.xml
[2025-06-03 20:05:37] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:39 start_atlas.sh
[2025-06-03 20:05:37] -rw-r--r--. 1 boinc boinc         0 Jun  3 14:39 boinc_lockfile
[2025-06-03 20:05:37] -rw-r--r--. 1 boinc boinc      2523 Jun  3 14:39 pandaJob.out
[2025-06-03 20:05:37] -rw-------. 1 boinc boinc    982666 Jun  3 14:39 agis_schedconf.cvmfs.json
[2025-06-03 20:05:37] drwx------. 4 boinc boinc      4096 Jun  3 14:39 pilot3
[2025-06-03 20:05:37] -rw-------. 1 boinc boinc 180877968 Jun  3 18:21 HITS.45006595._019319.pool.root.1
[2025-06-03 20:05:37] -rw-r--r--. 1 boinc boinc       531 Jun  3 18:21 boinc_task_state.xml
[2025-06-03 20:05:37] -rw-------. 1 boinc boinc      1013 Jun  3 18:22 memory_monitor_summary.json
[2025-06-03 20:05:37] -rw-------. 1 boinc boinc   1603667 Jun  3 18:22 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:05:37] -rw-------. 1 boinc boinc    381615 Jun  3 18:22 log.45006595._019319.job.log.tgz.1
[2025-06-03 20:05:37] -rw-------. 1 boinc boinc        95 Jun  3 18:23 pilot_heartbeat.json
[2025-06-03 20:05:37] -rw-------. 1 boinc boinc      7683 Jun  3 18:23 heartbeat.json
[2025-06-03 20:05:37] -rw-------. 1 boinc boinc      4798 Jun  3 18:24 pilotlog.txt
[2025-06-03 20:05:37] -rw-------. 1 boinc boinc   1165362 Jun  3 18:24 log.45006595._019319.job.log.1
[2025-06-03 20:05:37] -rw-------. 1 boinc boinc       357 Jun  3 18:24 output.list
[2025-06-03 20:05:37] -rw-r--r--. 1 boinc boinc       620 Jun  3 18:24 runtime_log
[2025-06-03 20:05:37] -rw-------. 1 boinc boinc   1566720 Jun  3 18:24 result.tar.gz
[2025-06-03 20:05:37] -rw-------. 1 boinc boinc       656 Jun  3 18:24 SqEMDmKGYg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmjLXKDmtIJ9rm.diag
[2025-06-03 20:05:37] -rw-r--r--. 1 boinc boinc      8673 Jun  3 18:24 runtime_log.err
[2025-06-03 20:05:37] -rw-r--r--. 1 boinc boinc      8192 Jun  3 20:05 boinc_mmap_file
[2025-06-03 20:05:37] -rw-r--r--. 1 boinc boinc        28 Jun  3 20:05 wrapper_checkpoint.txt
[2025-06-03 20:05:37] -rw-r--r--. 1 boinc boinc     20518 Jun  3 20:05 stderr.txt
[2025-06-03 20:05:37] HITS file was successfully produced:
[2025-06-03 20:05:37] -rw-------. 1 boinc boinc 180877968 Jun  3 18:21 shared/HITS.pool.root.1
[2025-06-03 20:05:37]  *** Contents of shared directory: ***
[2025-06-03 20:05:37] total 392596
[2025-06-03 20:05:37] -rw-r--r--. 2 boinc boinc 219038417 Jun  3 14:39 ATLAS.root_0
[2025-06-03 20:05:37] -rw-r--r--. 2 boinc boinc    508878 Jun  3 14:39 input.tar.gz
[2025-06-03 20:05:37] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:39 start_atlas.sh
[2025-06-03 20:05:37] -rw-------. 1 boinc boinc 180877968 Jun  3 18:21 HITS.pool.root.1
[2025-06-03 20:05:37] -rw-------. 1 boinc boinc   1566720 Jun  3 18:24 result.tar.gz
20:05:39 (22112): run_atlas exited; CPU time 51019.318617
20:05:39 (22112): called boinc_finish(0)

</stderr_txt>
]]>

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