Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:49:30 (1813390): wrapper (7.7.26015): starting
01:49:30 (1813390): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 01:49:30] Arguments: --nthreads 4
[2025-06-05 01:49:30] Threads: 4
[2025-06-05 01:49:30] Checking for CVMFS
[2025-06-05 01:49:30] No cvmfs_config command found, will try listing directly
[2025-06-05 01:49:30] CVMFS is ok
[2025-06-05 01:49:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 01:49:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 01:49:30] Further information can be found at the LHC@home message board.
[2025-06-05 01:49:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:49:30] Checking for apptainer binary...
[2025-06-05 01:49:30] which: no apptainer in ((null))
[2025-06-05 01:49:30] apptainer is not installed, using version from CVMFS
[2025-06-05 01:49:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:49:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-05 01:49:30] apptainer works
[2025-06-05 01:49:30] Set ATHENA_PROC_NUMBER=4
[2025-06-05 01:49:30] Set ATHENA_CORE_NUMBER=4
[2025-06-05 01:49:30] Starting ATLAS job with PandaID=6677443277
[2025-06-05 01:49:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 04:47:27]  *** The last 200 lines of the pilot log: ***
[2025-06-05 04:47:27] 2025-06-05 02:42:44,079 | INFO     | executing command: lscpu
[2025-06-05 04:47:27] 2025-06-05 02:42:44,144 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 04:47:27] 2025-06-05 02:42:44,417 | INFO     | number of running child processes to parent process 1824268: 1
[2025-06-05 04:47:27] 2025-06-05 02:42:44,418 | INFO     | maximum number of monitored processes: 6
[2025-06-05 04:47:27] 2025-06-05 02:42:45,301 | INFO     | PID=1817051 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 04:47:27] 2025-06-05 02:42:45,302 | INFO     | .. there are 9 such processes running
[2025-06-05 04:47:27] 2025-06-05 02:42:46,920 | INFO     | monitor loop #735: job 0:6677443277 is in state 'finished'
[2025-06-05 04:47:27] 2025-06-05 02:42:46,921 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:47:27] 2025-06-05 02:42:48,480 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 04:47:27] 2025-06-05 02:42:48,480 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6677443277/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:47:27] 2025-06-05 02:42:48,481 | INFO     | extracted standard info from prmon json
[2025-06-05 04:47:27] 2025-06-05 02:42:48,481 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 04:47:27] 2025-06-05 02:42:48,481 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 04:47:27] 2025-06-05 02:42:48,482 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 04:47:27] 2025-06-05 02:42:48,482 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 04:47:27] 2025-06-05 02:42:48,486 | INFO     | fitting pss+swap vs Time
[2025-06-05 04:47:27] 2025-06-05 02:42:48,486 | INFO     | sum of square deviations: 1523386702.5
[2025-06-05 04:47:27] 2025-06-05 02:42:48,487 | INFO     | sum of deviations: 23919406528.5
[2025-06-05 04:47:27] 2025-06-05 02:42:48,487 | INFO     | mean x: 1749086163.5
[2025-06-05 04:47:27] 2025-06-05 02:42:48,487 | INFO     | mean y: 2299401.1117647057
[2025-06-05 04:47:27] 2025-06-05 02:42:48,487 | INFO     | -- intersect: -27460919838.936
[2025-06-05 04:47:27] 2025-06-05 02:42:48,487 | INFO     | intersect: -27460919838.936
[2025-06-05 04:47:27] 2025-06-05 02:42:48,488 | INFO     | chi2: 1.6712745184674218
[2025-06-05 04:47:27] 2025-06-05 02:42:48,488 | INFO     | sum of square deviations: 1392881930.0
[2025-06-05 04:47:27] 2025-06-05 02:42:48,489 | INFO     | sum of deviations: 23105046921.0
[2025-06-05 04:47:27] 2025-06-05 02:42:48,489 | INFO     | mean x: 1749086011.0
[2025-06-05 04:47:27] 2025-06-05 02:42:48,489 | INFO     | mean y: 2298449.309090909
[2025-06-05 04:47:27] 2025-06-05 02:42:48,489 | INFO     | -- intersect: -29011441683.725533
[2025-06-05 04:47:27] 2025-06-05 02:42:48,490 | INFO     | intersect: -29011441683.725533
[2025-06-05 04:47:27] 2025-06-05 02:42:48,490 | INFO     | chi2: 1.6729373840472914
[2025-06-05 04:47:27] 2025-06-05 02:42:48,490 | INFO     | current chi2=1.6729373840472914 (change=-0.09949685473541936 %)
[2025-06-05 04:47:27] 2025-06-05 02:42:48,490 | INFO     | right removable region: 164
[2025-06-05 04:47:27] 2025-06-05 02:42:48,491 | INFO     | sum of square deviations: 1392881930.0
[2025-06-05 04:47:27] 2025-06-05 02:42:48,491 | INFO     | sum of deviations: -3042996163.000001
[2025-06-05 04:47:27] 2025-06-05 02:42:48,492 | INFO     | mean x: 1749086316.0
[2025-06-05 04:47:27] 2025-06-05 02:42:48,492 | INFO     | mean y: 2330523.890909091
[2025-06-05 04:47:27] 2025-06-05 02:42:48,492 | INFO     | -- intersect: 3823517972.52398
[2025-06-05 04:47:27] 2025-06-05 02:42:48,492 | INFO     | intersect: 3823517972.52398
[2025-06-05 04:47:27] 2025-06-05 02:42:48,492 | INFO     | chi2: 0.007263384231076497
[2025-06-05 04:47:27] 2025-06-05 02:42:48,492 | INFO     | current chi2=0.007263384231076497 (change=99.56539849373536 %)
[2025-06-05 04:47:27] 2025-06-05 02:42:48,493 | INFO     | sum of square deviations: 1270051720.0
[2025-06-05 04:47:27] 2025-06-05 02:42:48,494 | INFO     | sum of deviations: -2043441196.0
[2025-06-05 04:47:27] 2025-06-05 02:42:48,494 | INFO     | mean x: 1749086468.5
[2025-06-05 04:47:27] 2025-06-05 02:42:48,494 | INFO     | mean y: 2329278.4375
[2025-06-05 04:47:27] 2025-06-05 02:42:48,494 | INFO     | -- intersect: 2816510219.9026685
[2025-06-05 04:47:27] 2025-06-05 02:42:48,494 | INFO     | intersect: 2816510219.9026685
[2025-06-05 04:47:27] 2025-06-05 02:42:48,494 | INFO     | chi2: 0.006322189887568303
[2025-06-05 04:47:27] 2025-06-05 02:42:48,494 | INFO     | current chi2=0.006322189887568303 (change=12.958069042820005 %)
[2025-06-05 04:47:27] 2025-06-05 02:42:48,495 | INFO     | left removable region: 20
[2025-06-05 04:47:27] 2025-06-05 02:42:48,495 | INFO     | sum of square deviations: 925859220.0
[2025-06-05 04:47:27] 2025-06-05 02:42:48,496 | INFO     | sum of deviations: -4295131.999999978
[2025-06-05 04:47:27] 2025-06-05 02:42:48,496 | INFO     | mean x: 1749086590.5
[2025-06-05 04:47:27] 2025-06-05 02:42:48,496 | INFO     | mean y: 2326128.4583333335
[2025-06-05 04:47:27] 2025-06-05 02:42:48,496 | INFO     | -- intersect: 10440275.429432683
[2025-06-05 04:47:27] 2025-06-05 02:42:48,496 | INFO     | intersect: 10440275.429432683
[2025-06-05 04:47:27] 2025-06-05 02:42:48,496 | INFO     | chi2: 0.0029661048255294428
[2025-06-05 04:47:27] 2025-06-05 02:42:48,496 | INFO     | -- intersect: 10440275.429432683
[2025-06-05 04:47:27] 2025-06-05 02:42:48,497 | INFO     | current memory leak: -0.00 B/s (using 144 data points, chi2=0.00)
[2025-06-05 04:47:27] 2025-06-05 02:42:48,497 | INFO     | ..............................
[2025-06-05 04:47:27] 2025-06-05 02:42:48,497 | INFO     | . Timing measurements:
[2025-06-05 04:47:27] 2025-06-05 02:42:48,497 | INFO     | . get job = 0 s
[2025-06-05 04:47:27] 2025-06-05 02:42:48,497 | INFO     | . initial setup = 1 s
[2025-06-05 04:47:27] 2025-06-05 02:42:48,498 | INFO     | . payload setup = 7 s
[2025-06-05 04:47:27] 2025-06-05 02:42:48,498 | INFO     | . stage-in = 0 s
[2025-06-05 04:47:27] 2025-06-05 02:42:48,498 | INFO     | . payload execution = 10352 s
[2025-06-05 04:47:27] 2025-06-05 02:42:48,498 | INFO     | . stage-out = 0 s
[2025-06-05 04:47:27] 2025-06-05 02:42:48,498 | INFO     | . log creation = 0 s
[2025-06-05 04:47:27] 2025-06-05 02:42:48,498 | INFO     | ..............................
[2025-06-05 04:47:27] 2025-06-05 02:42:48,746 | INFO     | 
[2025-06-05 04:47:27] 2025-06-05 02:42:48,747 | INFO     | job summary report
[2025-06-05 04:47:27] 2025-06-05 02:42:48,747 | INFO     | --------------------------------------------------
[2025-06-05 04:47:27] 2025-06-05 02:42:48,747 | INFO     | PanDA job id: 6677443277
[2025-06-05 04:47:27] 2025-06-05 02:42:48,747 | INFO     | task id: 45006595
[2025-06-05 04:47:27] 2025-06-05 02:42:48,747 | INFO     | errors: (none)
[2025-06-05 04:47:27] 2025-06-05 02:42:48,747 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 04:47:27] 2025-06-05 02:42:48,747 | INFO     | pilot state: finished 
[2025-06-05 04:47:27] 2025-06-05 02:42:48,747 | INFO     | transexitcode: 0
[2025-06-05 04:47:27] 2025-06-05 02:42:48,747 | INFO     | exeerrorcode: 0
[2025-06-05 04:47:27] 2025-06-05 02:42:48,748 | INFO     | exeerrordiag: 
[2025-06-05 04:47:27] 2025-06-05 02:42:48,748 | INFO     | exitcode: 0
[2025-06-05 04:47:27] 2025-06-05 02:42:48,748 | INFO     | exitmsg: OK
[2025-06-05 04:47:27] 2025-06-05 02:42:48,748 | INFO     | cpuconsumptiontime: 38237 s
[2025-06-05 04:47:27] 2025-06-05 02:42:48,748 | INFO     | nevents: 400
[2025-06-05 04:47:27] 2025-06-05 02:42:48,748 | INFO     | neventsw: 0
[2025-06-05 04:47:27] 2025-06-05 02:42:48,748 | INFO     | pid: 1824268
[2025-06-05 04:47:27] 2025-06-05 02:42:48,748 | INFO     | pgrp: 1824268
[2025-06-05 04:47:27] 2025-06-05 02:42:48,748 | INFO     | corecount: 4
[2025-06-05 04:47:27] 2025-06-05 02:42:48,748 | INFO     | event service: False
[2025-06-05 04:47:27] 2025-06-05 02:42:48,748 | INFO     | sizes: {0: 2397180, 1: 2397379, 5: 2397585, 12: 2397641, 10363: 2426541, 10365: 2435504, 10367: 2435688, 10372: 2435858}
[2025-06-05 04:47:27] 2025-06-05 02:42:48,749 | INFO     | --------------------------------------------------
[2025-06-05 04:47:27] 2025-06-05 02:42:48,749 | INFO     | 
[2025-06-05 04:47:27] 2025-06-05 02:42:48,749 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-06-05 04:47:27] 2025-06-05 02:42:48,773 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 04:47:27] 2025-06-05 02:42:48,773 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 04:47:27] 2025-06-05 02:42:48,773 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 04:47:27] 2025-06-05 02:42:48,773 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 04:47:27] 2025-06-05 02:42:48,773 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 04:47:27] 2025-06-05 02:42:48,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 04:47:27] 2025-06-05 02:42:48,774 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 04:47:27] 2025-06-05 02:42:48,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 04:47:27] 2025-06-05 02:42:48,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 04:47:27] 2025-06-05 02:42:48,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 04:47:27] 2025-06-05 02:42:48,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 04:47:27] 2025-06-05 02:42:48,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 04:47:27] 2025-06-05 02:42:48,774 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 04:47:27] 2025-06-05 02:42:48,774 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 04:47:27] 2025-06-05 02:42:48,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 04:47:27] 2025-06-05 02:42:48,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 04:47:27] 2025-06-05 02:42:48,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 04:47:27] 2025-06-05 02:42:48,775 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 04:47:27] 2025-06-05 02:42:48,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 04:47:27] 2025-06-05 02:42:48,775 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 04:47:27] 2025-06-05 02:42:48,775 | INFO     | job 6677443277 has completed (purged errors)
[2025-06-05 04:47:27] 2025-06-05 02:42:48,775 | INFO     | overall cleanup function is called
[2025-06-05 04:47:27] 2025-06-05 02:42:49,783 | INFO     | --- collectZombieJob: --- 10, [1824268]
[2025-06-05 04:47:27] 2025-06-05 02:42:49,784 | INFO     | zombie collector waiting for pid 1824268
[2025-06-05 04:47:27] 2025-06-05 02:42:49,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 04:47:27] 2025-06-05 02:42:49,784 | INFO     | collected zombie processes
[2025-06-05 04:47:27] 2025-06-05 02:42:49,784 | INFO     | will attempt to kill all subprocesses of pid=1824268
[2025-06-05 04:47:27] 2025-06-05 02:42:50,180 | INFO     | process IDs to be killed: [1824268] (in reverse order)
[2025-06-05 04:47:27] 2025-06-05 02:42:50,303 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 04:47:27] 2025-06-05 02:42:50,303 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 04:47:27] 2025-06-05 02:42:50,319 | INFO     | did not find any defunct processes belonging to 1824268
[2025-06-05 04:47:27] 2025-06-05 02:42:50,333 | INFO     | did not find any defunct processes belonging to 1824268
[2025-06-05 04:47:27] 2025-06-05 02:42:50,333 | INFO     | ready for new job
[2025-06-05 04:47:27] 2025-06-05 02:42:50,334 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 04:47:27] 2025-06-05 02:42:50,336 | INFO     | **************************************
[2025-06-05 04:47:27] 2025-06-05 02:42:50,336 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 04:47:27] 2025-06-05 02:42:50,337 | INFO     | **************************************
[2025-06-05 04:47:27] 2025-06-05 02:42:50,337 | INFO     | 
[2025-06-05 04:47:27] 2025-06-05 02:42:50,342 | INFO     | architecture information:
[2025-06-05 04:47:27] 2025-06-05 02:42:50,342 | INFO     | executing command: cat /etc/os-release
[2025-06-05 04:47:27] 2025-06-05 02:42:50,360 | INFO     | cat /etc/os-release:
[2025-06-05 04:47:27] NAME="CentOS Linux"
[2025-06-05 04:47:27] VERSION="7 (Core)"
[2025-06-05 04:47:27] ID="centos"
[2025-06-05 04:47:27] ID_LIKE="rhel fedora"
[2025-06-05 04:47:27] VERSION_ID="7"
[2025-06-05 04:47:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 04:47:27] ANSI_COLOR="0;31"
[2025-06-05 04:47:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 04:47:27] HOME_URL="https://www.centos.org/"
[2025-06-05 04:47:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 04:47:27] 
[2025-06-05 04:47:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 04:47:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 04:47:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 04:47:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 04:47:27] 
[2025-06-05 04:47:27] 2025-06-05 02:42:50,361 | INFO     | **************************************
[2025-06-05 04:47:27] 2025-06-05 02:42:50,864 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-06-05 04:47:27] 2025-06-05 02:42:50,883 | INFO     | sufficient remaining disk space (659712638976 B)
[2025-06-05 04:47:27] 2025-06-05 02:42:50,884 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 04:47:27] 2025-06-05 02:42:50,884 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 04:47:27] 2025-06-05 02:42:50,884 | INFO     | update_server=False
[2025-06-05 04:47:27] 2025-06-05 02:42:50,884 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 04:47:27] 2025-06-05 02:42:50,885 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:47:27] 2025-06-05 02:42:50,885 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 04:47:27] 2025-06-05 02:42:50,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 04:47:27] 2025-06-05 02:42:50,885 | INFO     | aborting loop
[2025-06-05 04:47:27] 2025-06-05 02:42:51,318 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 04:47:27] 2025-06-05 02:42:51,319 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 04:47:27] 2025-06-05 02:42:51,319 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 04:47:27] 2025-06-05 02:42:51,572 | INFO     | all data control threads have been joined
[2025-06-05 04:47:27] 2025-06-05 02:42:51,889 | INFO     | [job] retrieve thread has finished
[2025-06-05 04:47:27] 2025-06-05 02:42:51,891 | INFO     | [job] job monitor thread has finished
[2025-06-05 04:47:27] 2025-06-05 02:42:51,942 | INFO     | [data] copytool_in thread has finished
[2025-06-05 04:47:27] 2025-06-05 02:42:52,024 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 04:47:27] 2025-06-05 02:42:52,056 | INFO     | all job control threads have been joined
[2025-06-05 04:47:27] 2025-06-05 02:42:52,088 | INFO     | [job] validate thread has finished
[2025-06-05 04:47:27] 2025-06-05 02:42:52,112 | INFO     | all payload control threads have been joined
[2025-06-05 04:47:27] 2025-06-05 02:42:52,376 | INFO     | [payload] failed_post thread has finished
[2025-06-05 04:47:27] 2025-06-05 02:42:52,390 | INFO     | [payload] validate_post thread has finished
[2025-06-05 04:47:27] 2025-06-05 02:42:52,419 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 04:47:27] 2025-06-05 02:42:52,577 | INFO     | [data] control thread has finished
[2025-06-05 04:47:27] 2025-06-05 02:42:52,607 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 04:47:27] 2025-06-05 02:42:52,890 | INFO     | [data] copytool_out thread has finished
[2025-06-05 04:47:27] 2025-06-05 02:42:53,061 | INFO     | [job] control thread has finished
[2025-06-05 04:47:27] 2025-06-05 02:42:53,106 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 04:47:27] 2025-06-05 02:42:53,117 | INFO     | [payload] control thread has finished
[2025-06-05 04:47:27] 2025-06-05 02:42:53,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:47:27] 2025-06-05 02:42:54,615 | INFO     | [job] queue monitor thread has finished
[2025-06-05 04:47:27] 2025-06-05 02:42:54,891 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 04:47:27] 2025-06-05 02:42:56,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22862298957632)>', '<ExcThread(monitor, started 22862064752384)>']
[2025-06-05 04:47:27] 2025-06-05 02:42:57,347 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 04:47:27] 2025-06-05 02:42:57,348 | INFO     | [monitor] control thread has ended
[2025-06-05 04:47:27] 2025-06-05 02:43:01,994 | INFO     | all workflow threads have been joined
[2025-06-05 04:47:27] 2025-06-05 02:43:01,994 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 04:47:27] 2025-06-05 02:43:01,995 | INFO     | traces error code: 0
[2025-06-05 04:47:27] 2025-06-05 02:43:01,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 04:47:27] 2025-06-05 02:43:02,138 [wrapper] ==== pilot stdout END ====
[2025-06-05 04:47:27] 2025-06-05 02:43:02,140 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 04:47:27] 2025-06-05 02:43:02,143 [wrapper] pilotpid: 1817051
[2025-06-05 04:47:27] 2025-06-05 02:43:02,146 [wrapper] Pilot exit status: 0
[2025-06-05 04:47:27] 2025-06-05 02:43:02,157 [wrapper] pandaids: 6677443277
[2025-06-05 04:47:27] 2025-06-05 02:43:02,234 [wrapper] cleanup supervisor_pilot 2107329 1817052
[2025-06-05 04:47:27] 2025-06-05 02:43:02,237 [wrapper] Test setup, not cleaning
[2025-06-05 04:47:27] 2025-06-05 02:43:02,240 [wrapper] apfmon messages muted
[2025-06-05 04:47:27] 2025-06-05 02:43:02,243 [wrapper] ==== wrapper stdout END ====
[2025-06-05 04:47:27] 2025-06-05 02:43:02,246 [wrapper] ==== wrapper stderr END ====
[2025-06-05 04:47:27]  *** Error codes and diagnostics ***
[2025-06-05 04:47:27]     "exeErrorCode": 0,
[2025-06-05 04:47:27]     "exeErrorDiag": "",
[2025-06-05 04:47:27]     "pilotErrorCode": 0,
[2025-06-05 04:47:27]     "pilotErrorDiag": "",
[2025-06-05 04:47:27]  *** Listing of results directory ***
[2025-06-05 04:47:27] total 412644
[2025-06-05 04:47:27] -rw-r--r-- 1 boinc boinc    495897 Jun  3 03:51 pilot3.tar.gz
[2025-06-05 04:47:27] -rw-r--r-- 1 boinc boinc      5111 Jun  3 04:06 queuedata.json
[2025-06-05 04:47:27] -rwx------ 1 boinc boinc     37140 Jun  3 04:07 runpilot2-wrapper.sh
[2025-06-05 04:47:27] -rw-r--r-- 1 boinc boinc       100 Jun  3 18:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 04:47:27] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 18:03 run_atlas
[2025-06-05 04:47:27] -rw-r--r-- 1 boinc boinc       105 Jun  3 18:03 job.xml
[2025-06-05 04:47:27] -rw------- 2 boinc boinc  20709376 Jun  3 18:08 copy_6fdH6l
[2025-06-05 04:47:27] -rw-r--r-- 2 boinc boinc 215875048 Jun  5 01:49 EVNT.45006593._000674.pool.root.1
[2025-06-05 04:47:27] -rw-r--r-- 1 boinc boinc      6636 Jun  5 01:49 init_data.xml
[2025-06-05 04:47:27] drwxrwx--x 2 boinc boinc      4096 Jun  5 01:49 shared
[2025-06-05 04:47:27] -rw-r--r-- 2 boinc boinc    508878 Jun  5 01:49 input.tar.gz
[2025-06-05 04:47:27] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:49 start_atlas.sh
[2025-06-05 04:47:27] -rw-r--r-- 1 boinc boinc         0 Jun  5 01:49 boinc_lockfile
[2025-06-05 04:47:27] -rw-r--r-- 1 boinc boinc      2524 Jun  5 01:49 pandaJob.out
[2025-06-05 04:47:27] -rw------- 1 boinc boinc    987117 Jun  5 01:49 agis_schedconf.cvmfs.json
[2025-06-05 04:47:27] -rw------- 1 boinc boinc   1598969 Jun  5 01:49 agis_ddmendpoints.agis.ALL.json
[2025-06-05 04:47:27] drwx------ 4 boinc boinc      4096 Jun  5 01:49 pilot3
[2025-06-05 04:47:27] -rw------- 1 boinc boinc 179564380 Jun  5 04:42 HITS.45006595._016853.pool.root.1
[2025-06-05 04:47:27] -rw-r--r-- 1 boinc boinc       528 Jun  5 04:42 boinc_task_state.xml
[2025-06-05 04:47:27] -rw------- 1 boinc boinc      1035 Jun  5 04:42 memory_monitor_summary.json
[2025-06-05 04:47:27] -rw------- 1 boinc boinc    315401 Jun  5 04:42 log.45006595._016853.job.log.tgz.1
[2025-06-05 04:47:27] -rw------- 1 boinc boinc      7720 Jun  5 04:42 heartbeat.json
[2025-06-05 04:47:27] -rw------- 1 boinc boinc        95 Jun  5 04:42 pilot_heartbeat.json
[2025-06-05 04:47:27] -rw------- 1 boinc boinc      4363 Jun  5 04:43 pilotlog.txt
[2025-06-05 04:47:27] -rw------- 1 boinc boinc    966773 Jun  5 04:43 log.45006595._016853.job.log.1
[2025-06-05 04:47:27] -rw------- 1 boinc boinc       357 Jun  5 04:43 output.list
[2025-06-05 04:47:27] -rw-r--r-- 1 boinc boinc       620 Jun  5 04:43 runtime_log
[2025-06-05 04:47:27] -rw------- 1 boinc boinc   1300480 Jun  5 04:43 result.tar.gz
[2025-06-05 04:47:27] -rw-r--r-- 1 boinc boinc      9026 Jun  5 04:43 runtime_log.err
[2025-06-05 04:47:27] -rw------- 1 boinc boinc       665 Jun  5 04:43 BBRLDmdEWg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm29WKDm7jGfyn.diag
[2025-06-05 04:47:27] -rw-r--r-- 1 boinc boinc        27 Jun  5 04:47 wrapper_checkpoint.txt
[2025-06-05 04:47:27] -rw-r--r-- 1 boinc boinc      8192 Jun  5 04:47 boinc_mmap_file
[2025-06-05 04:47:27] -rw-r--r-- 1 boinc boinc     20965 Jun  5 04:47 stderr.txt
[2025-06-05 04:47:27] HITS file was successfully produced:
[2025-06-05 04:47:27] -rw------- 1 boinc boinc 179564380 Jun  5 04:42 shared/HITS.pool.root.1
[2025-06-05 04:47:27]  *** Contents of shared directory: ***
[2025-06-05 04:47:27] total 408192
[2025-06-05 04:47:27] -rw------- 2 boinc boinc  20709376 Jun  3 18:08 copy_6fdH6l
[2025-06-05 04:47:27] -rw-r--r-- 2 boinc boinc 215875048 Jun  5 01:49 ATLAS.root_0
[2025-06-05 04:47:27] -rw-r--r-- 2 boinc boinc    508878 Jun  5 01:49 input.tar.gz
[2025-06-05 04:47:27] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:49 start_atlas.sh
[2025-06-05 04:47:27] -rw------- 1 boinc boinc 179564380 Jun  5 04:42 HITS.pool.root.1
[2025-06-05 04:47:27] -rw------- 1 boinc boinc   1300480 Jun  5 04:43 result.tar.gz
04:47:29 (1813390): run_atlas exited; CPU time 38654.061296
04:47:29 (1813390): called boinc_finish(0)

</stderr_txt>
]]>

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