Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:37:21 (26854): wrapper (7.7.26015): starting
16:37:21 (26854): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 16:37:21] Arguments: --nthreads 8
[2025-06-03 16:37:21] Threads: 8
[2025-06-03 16:37:21] Checking for CVMFS
[2025-06-03 16:37:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 16:37:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 16:37:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 16:37:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 16:37:24] 2.11.2.0 4277 31885 95740 146743 2 94 14670059 25165825 4478 130560 0 15698053 99.785 17049281 2069 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 16:37:24] CVMFS is ok
[2025-06-03 16:37:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 16:37:24] Checking for apptainer binary...
[2025-06-03 16:37:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 16:37:24] Running /usr/bin/apptainer --version
[2025-06-03 16:37:24] apptainer version 1.3.2-1.el7
[2025-06-03 16:37:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 16:37:29] cg-vwn279.simple-grid.lan
[2025-06-03 16:37:29] apptainer works
[2025-06-03 16:37:29] Set ATHENA_PROC_NUMBER=8
[2025-06-03 16:37:29] Set ATHENA_CORE_NUMBER=8
[2025-06-03 16:37:29] Starting ATLAS job with PandaID=6677398569
[2025-06-03 16:37:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:54:20]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:54:20] 2025-06-03 18:45:56,713 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:54:20] 2025-06-03 18:45:56,718 | INFO     | fitting pss+swap vs Time
[2025-06-03 20:54:20] 2025-06-03 18:45:56,719 | INFO     | sum of square deviations: 3871990738.0
[2025-06-03 20:54:20] 2025-06-03 18:45:56,721 | INFO     | sum of deviations: 52989634055.49999
[2025-06-03 20:54:20] 2025-06-03 18:45:56,721 | INFO     | mean x: 1748969206.5
[2025-06-03 20:54:20] 2025-06-03 18:45:56,721 | INFO     | mean y: 2450135.797413793
[2025-06-03 20:54:20] 2025-06-03 18:45:56,721 | INFO     | -- intersect: -23932844263.859077
[2025-06-03 20:54:20] 2025-06-03 18:45:56,722 | INFO     | intersect: -23932844263.859077
[2025-06-03 20:54:20] 2025-06-03 18:45:56,722 | INFO     | chi2: 5.3739817212637835
[2025-06-03 20:54:20] 2025-06-03 18:45:56,723 | INFO     | sum of square deviations: 3627000098.0
[2025-06-03 20:54:20] 2025-06-03 18:45:56,725 | INFO     | sum of deviations: 66822307015.99999
[2025-06-03 20:54:20] 2025-06-03 18:45:56,725 | INFO     | mean x: 1748969054.0
[2025-06-03 20:54:20] 2025-06-03 18:45:56,725 | INFO     | mean y: 2458579.1629955946
[2025-06-03 20:54:20] 2025-06-03 18:45:56,725 | INFO     | -- intersect: -32219803326.017433
[2025-06-03 20:54:20] 2025-06-03 18:45:56,725 | INFO     | intersect: -32219803326.017433
[2025-06-03 20:54:20] 2025-06-03 18:45:56,726 | INFO     | chi2: 4.6474720293019605
[2025-06-03 20:54:20] 2025-06-03 18:45:56,726 | INFO     | current chi2=4.6474720293019605 (change=13.51902052601273 %)
[2025-06-03 20:54:20] 2025-06-03 18:45:56,726 | INFO     | right removable region: 226
[2025-06-03 20:54:20] 2025-06-03 18:45:56,726 | INFO     | sum of square deviations: 3627000098.0
[2025-06-03 20:54:20] 2025-06-03 18:45:56,728 | INFO     | sum of deviations: -21037215667.999996
[2025-06-03 20:54:20] 2025-06-03 18:45:56,728 | INFO     | mean x: 1748969359.0
[2025-06-03 20:54:20] 2025-06-03 18:45:56,728 | INFO     | mean y: 2496131.2599118943
[2025-06-03 20:54:20] 2025-06-03 18:45:56,729 | INFO     | -- intersect: 10146815019.559736
[2025-06-03 20:54:20] 2025-06-03 18:45:56,729 | INFO     | intersect: 10146815019.559736
[2025-06-03 20:54:20] 2025-06-03 18:45:56,729 | INFO     | chi2: 1.3418023457901942
[2025-06-03 20:54:20] 2025-06-03 18:45:56,729 | INFO     | current chi2=1.3418023457901942 (change=75.03150521556582 %)
[2025-06-03 20:54:20] 2025-06-03 18:45:56,730 | INFO     | sum of square deviations: 3392567795.5
[2025-06-03 20:54:20] 2025-06-03 18:45:56,731 | INFO     | sum of deviations: -38935605819.99999
[2025-06-03 20:54:20] 2025-06-03 18:45:56,732 | INFO     | mean x: 1748969511.5
[2025-06-03 20:54:20] 2025-06-03 18:45:56,732 | INFO     | mean y: 2507662.4864864866
[2025-06-03 20:54:20] 2025-06-03 18:45:56,732 | INFO     | -- intersect: 20074969465.987667
[2025-06-03 20:54:20] 2025-06-03 18:45:56,732 | INFO     | intersect: 20074969465.987667
[2025-06-03 20:54:20] 2025-06-03 18:45:56,733 | INFO     | chi2: 0.9375177166120697
[2025-06-03 20:54:20] 2025-06-03 18:45:56,733 | INFO     | current chi2=0.9375177166120697 (change=30.129968877050906 %)
[2025-06-03 20:54:20] 2025-06-03 18:45:56,733 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 20:54:20] 2025-06-03 18:45:56,735 | INFO     | sum of deviations: -32691827966.0
[2025-06-03 20:54:20] 2025-06-03 18:45:56,735 | INFO     | mean x: 1748969664.0
[2025-06-03 20:54:20] 2025-06-03 18:45:56,735 | INFO     | mean y: 2503403.3271889403
[2025-06-03 20:54:20] 2025-06-03 18:45:56,736 | INFO     | -- intersect: 18048176219.56211
[2025-06-03 20:54:20] 2025-06-03 18:45:56,736 | INFO     | intersect: 18048176219.56211
[2025-06-03 20:54:20] 2025-06-03 18:45:56,736 | INFO     | chi2: 0.9240082178092102
[2025-06-03 20:54:20] 2025-06-03 18:45:56,736 | INFO     | current chi2=0.9240082178092102 (change=1.4409859742895488 %)
[2025-06-03 20:54:20] 2025-06-03 18:45:56,736 | INFO     | left removable region: 30
[2025-06-03 20:54:20] 2025-06-03 18:45:56,737 | INFO     | sum of square deviations: 2334722845.0
[2025-06-03 20:54:20] 2025-06-03 18:45:56,738 | INFO     | sum of deviations: 5645760236.499999
[2025-06-03 20:54:20] 2025-06-03 18:45:56,739 | INFO     | mean x: 1748969938.5
[2025-06-03 20:54:20] 2025-06-03 18:45:56,739 | INFO     | mean y: 2494973.3826530613
[2025-06-03 20:54:20] 2025-06-03 18:45:56,739 | INFO     | -- intersect: -4226814280.5031753
[2025-06-03 20:54:20] 2025-06-03 18:45:56,739 | INFO     | intersect: -4226814280.5031753
[2025-06-03 20:54:20] 2025-06-03 18:45:56,739 | INFO     | chi2: 0.0004546302499768994
[2025-06-03 20:54:20] 2025-06-03 18:45:56,739 | INFO     | -- intersect: -4226814280.5031753
[2025-06-03 20:54:20] 2025-06-03 18:45:56,740 | INFO     | current memory leak: 2.42 B/s (using 196 data points, chi2=0.00)
[2025-06-03 20:54:20] 2025-06-03 18:45:56,741 | INFO     | ..............................
[2025-06-03 20:54:20] 2025-06-03 18:45:56,741 | INFO     | . Timing measurements:
[2025-06-03 20:54:20] 2025-06-03 18:45:56,741 | INFO     | . get job = 0 s
[2025-06-03 20:54:20] 2025-06-03 18:45:56,741 | INFO     | . initial setup = 4 s
[2025-06-03 20:54:20] 2025-06-03 18:45:56,741 | INFO     | . payload setup = 170 s
[2025-06-03 20:54:20] 2025-06-03 18:45:56,741 | INFO     | . stage-in = 0 s
[2025-06-03 20:54:20] 2025-06-03 18:45:56,741 | INFO     | . payload execution = 14240 s
[2025-06-03 20:54:20] 2025-06-03 18:45:56,741 | INFO     | . stage-out = 3 s
[2025-06-03 20:54:20] 2025-06-03 18:45:56,741 | INFO     | . log creation = 1 s
[2025-06-03 20:54:20] 2025-06-03 18:45:56,741 | INFO     | ..............................
[2025-06-03 20:54:20] 2025-06-03 18:45:56,887 | INFO     | 
[2025-06-03 20:54:20] 2025-06-03 18:45:56,887 | INFO     | job summary report
[2025-06-03 20:54:20] 2025-06-03 18:45:56,887 | INFO     | --------------------------------------------------
[2025-06-03 20:54:20] 2025-06-03 18:45:56,887 | INFO     | PanDA job id: 6677398569
[2025-06-03 20:54:20] 2025-06-03 18:45:56,887 | INFO     | task id: 45006595
[2025-06-03 20:54:20] 2025-06-03 18:45:56,887 | INFO     | errors: (none)
[2025-06-03 20:54:20] 2025-06-03 18:45:56,887 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:54:20] 2025-06-03 18:45:56,887 | INFO     | pilot state: finished 
[2025-06-03 20:54:20] 2025-06-03 18:45:56,888 | INFO     | transexitcode: 0
[2025-06-03 20:54:20] 2025-06-03 18:45:56,888 | INFO     | exeerrorcode: 0
[2025-06-03 20:54:20] 2025-06-03 18:45:56,888 | INFO     | exeerrordiag: 
[2025-06-03 20:54:20] 2025-06-03 18:45:56,888 | INFO     | exitcode: 0
[2025-06-03 20:54:20] 2025-06-03 18:45:56,888 | INFO     | exitmsg: OK
[2025-06-03 20:54:20] 2025-06-03 18:45:56,888 | INFO     | cpuconsumptiontime: 50661 s
[2025-06-03 20:54:20] 2025-06-03 18:45:56,888 | INFO     | nevents: 400
[2025-06-03 20:54:20] 2025-06-03 18:45:56,888 | INFO     | neventsw: 0
[2025-06-03 20:54:20] 2025-06-03 18:45:56,888 | INFO     | pid: 7523
[2025-06-03 20:54:20] 2025-06-03 18:45:56,888 | INFO     | pgrp: 7523
[2025-06-03 20:54:20] 2025-06-03 18:45:56,888 | INFO     | corecount: 8
[2025-06-03 20:54:20] 2025-06-03 18:45:56,888 | INFO     | event service: False
[2025-06-03 20:54:20] 2025-06-03 18:45:56,889 | INFO     | sizes: {0: 2404961, 1: 2405160, 12: 2405160, 23: 2405188, 33: 2405216, 44: 2405272, 55: 2405428, 65: 2405456, 76: 2405484, 87: 2405540, 89: 2405774, 98: 2406082, 1
[2025-06-03 20:54:20] 2025-06-03 18:45:56,889 | INFO     | --------------------------------------------------
[2025-06-03 20:54:20] 2025-06-03 18:45:56,889 | INFO     | 
[2025-06-03 20:54:20] 2025-06-03 18:45:56,889 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-06-03 20:54:20] 2025-06-03 18:45:56,974 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:54:20] 2025-06-03 18:45:56,975 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:54:20] 2025-06-03 18:45:56,975 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:54:20] 2025-06-03 18:45:56,975 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:54:20] 2025-06-03 18:45:56,975 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:54:20] 2025-06-03 18:45:56,975 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:54:20] 2025-06-03 18:45:56,975 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:54:20] 2025-06-03 18:45:56,975 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:54:20] 2025-06-03 18:45:56,975 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:54:20] 2025-06-03 18:45:56,975 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:54:20] 2025-06-03 18:45:56,976 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:54:20] 2025-06-03 18:45:56,976 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:54:20] 2025-06-03 18:45:56,976 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:54:20] 2025-06-03 18:45:56,976 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:54:20] 2025-06-03 18:45:56,976 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:54:20] 2025-06-03 18:45:56,976 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:54:20] 2025-06-03 18:45:56,976 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:54:20] 2025-06-03 18:45:56,976 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:54:20] 2025-06-03 18:45:56,976 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:54:20] 2025-06-03 18:45:56,976 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:54:20] 2025-06-03 18:45:56,977 | INFO     | job 6677398569 has completed (purged errors)
[2025-06-03 20:54:20] 2025-06-03 18:45:56,977 | INFO     | overall cleanup function is called
[2025-06-03 20:54:20] 2025-06-03 18:45:57,987 | INFO     | --- collectZombieJob: --- 10, [7523]
[2025-06-03 20:54:20] 2025-06-03 18:45:57,987 | INFO     | zombie collector waiting for pid 7523
[2025-06-03 20:54:20] 2025-06-03 18:45:57,987 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:54:20] 2025-06-03 18:45:57,987 | INFO     | collected zombie processes
[2025-06-03 20:54:20] 2025-06-03 18:45:57,987 | INFO     | will attempt to kill all subprocesses of pid=7523
[2025-06-03 20:54:20] 2025-06-03 18:45:58,098 | INFO     | process IDs to be killed: [7523] (in reverse order)
[2025-06-03 20:54:20] 2025-06-03 18:45:58,715 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:54:20] 2025-06-03 18:45:58,716 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:54:20] 2025-06-03 18:45:58,719 | INFO     | did not find any defunct processes belonging to 7523
[2025-06-03 20:54:20] 2025-06-03 18:45:58,723 | INFO     | did not find any defunct processes belonging to 7523
[2025-06-03 20:54:20] 2025-06-03 18:45:58,723 | INFO     | ready for new job
[2025-06-03 20:54:20] 2025-06-03 18:45:58,724 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:54:20] 2025-06-03 18:45:58,726 | INFO     | **************************************
[2025-06-03 20:54:20] 2025-06-03 18:45:58,726 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:54:20] 2025-06-03 18:45:58,726 | INFO     | **************************************
[2025-06-03 20:54:20] 2025-06-03 18:45:58,726 | INFO     | 
[2025-06-03 20:54:20] 2025-06-03 18:45:58,727 | INFO     | pilot is running in a VM
[2025-06-03 20:54:20] 2025-06-03 18:45:58,727 | INFO     | architecture information:
[2025-06-03 20:54:20] 2025-06-03 18:45:58,735 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:54:20] 2025-06-03 18:45:59,034 | INFO     | cat /etc/os-release:
[2025-06-03 20:54:20] NAME="CentOS Linux"
[2025-06-03 20:54:20] VERSION="7 (Core)"
[2025-06-03 20:54:20] ID="centos"
[2025-06-03 20:54:20] ID_LIKE="rhel fedora"
[2025-06-03 20:54:20] VERSION_ID="7"
[2025-06-03 20:54:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:54:20] ANSI_COLOR="0;31"
[2025-06-03 20:54:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:54:20] HOME_URL="https://www.centos.org/"
[2025-06-03 20:54:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:54:20] 
[2025-06-03 20:54:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:54:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:54:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:54:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:54:20] 
[2025-06-03 20:54:20] 2025-06-03 18:45:59,035 | INFO     | **************************************
[2025-06-03 20:54:20] 2025-06-03 18:45:59,539 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-06-03 20:54:20] 2025-06-03 18:45:59,710 | INFO     | sufficient remaining disk space (496946380800 B)
[2025-06-03 20:54:20] 2025-06-03 18:45:59,710 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:54:20] 2025-06-03 18:45:59,710 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:54:20] 2025-06-03 18:45:59,710 | INFO     | update_server=False
[2025-06-03 20:54:20] 2025-06-03 18:45:59,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:54:20] 2025-06-03 18:45:59,711 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:54:20] 2025-06-03 18:45:59,858 | INFO     | all data control threads have been joined
[2025-06-03 20:54:20] 2025-06-03 18:45:59,988 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 20:54:20] 2025-06-03 18:45:59,988 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 20:54:20] 2025-06-03 18:45:59,988 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:54:20] 2025-06-03 18:45:59,988 | INFO     | will abort loop
[2025-06-03 20:54:20] 2025-06-03 18:46:00,320 | INFO     | all payload control threads have been joined
[2025-06-03 20:54:20] 2025-06-03 18:46:00,406 | INFO     | all job control threads have been joined
[2025-06-03 20:54:20] 2025-06-03 18:46:00,650 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:54:20] 2025-06-03 18:46:00,717 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:54:20] 2025-06-03 18:46:00,756 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:54:20] 2025-06-03 18:46:00,835 | INFO     | PID=31278 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 20:54:20] 2025-06-03 18:46:00,835 | INFO     | .. there are 9 such processes running
[2025-06-03 20:54:20] 2025-06-03 18:46:00,836 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:54:20] 2025-06-03 18:46:00,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:54:20] 2025-06-03 18:46:00,836 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:54:20] 2025-06-03 18:46:00,864 | INFO     | [data] control thread has finished
[2025-06-03 20:54:20] 2025-06-03 18:46:00,994 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:54:20] 2025-06-03 18:46:01,167 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:54:20] 2025-06-03 18:46:01,242 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:54:20] 2025-06-03 18:46:01,326 | INFO     | [payload] control thread has finished
[2025-06-03 20:54:20] 2025-06-03 18:46:01,392 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:54:20] 2025-06-03 18:46:01,413 | INFO     | [job] control thread has finished
[2025-06-03 20:54:20] 2025-06-03 18:46:01,448 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:54:20] 2025-06-03 18:46:01,491 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:54:20] 2025-06-03 18:46:01,718 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:54:20] 2025-06-03 18:46:01,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:54:20] 2025-06-03 18:46:02,163 | INFO     | [job] validate thread has finished
[2025-06-03 20:54:20] 2025-06-03 18:46:02,910 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:54:20] 2025-06-03 18:46:04,660 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:54:20] 2025-06-03 18:46:10,450 | INFO     | job.realtimelogging is not enabled
[2025-06-03 20:54:20] 2025-06-03 18:46:11,456 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:54:20] 2025-06-03 18:46:13,090 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140060160878400)>', '<ExcThread(monitor, started 140059722364672)>']
[2025-06-03 20:54:20] 2025-06-03 18:46:13,912 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:54:20] 2025-06-03 18:46:13,912 | INFO     | [monitor] control thread has ended
[2025-06-03 20:54:20] 2025-06-03 18:46:18,116 | INFO     | all workflow threads have been joined
[2025-06-03 20:54:20] 2025-06-03 18:46:18,116 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:54:20] 2025-06-03 18:46:18,116 | INFO     | traces error code: 0
[2025-06-03 20:54:20] 2025-06-03 18:46:18,117 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:54:20] 2025-06-03 18:46:18,454 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:54:20] 2025-06-03 18:46:18,514 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:54:20] 2025-06-03 18:46:18,568 [wrapper] pilotpid: 31278
[2025-06-03 20:54:20] 2025-06-03 18:46:18,623 [wrapper] Pilot exit status: 0
[2025-06-03 20:54:20] 2025-06-03 18:46:18,888 [wrapper] pandaids: 6677398569
[2025-06-03 20:54:20] 2025-06-03 18:46:19,171 [wrapper] cleanup supervisor_pilot 11940 31279
[2025-06-03 20:54:20] 2025-06-03 18:46:19,199 [wrapper] Test setup, not cleaning
[2025-06-03 20:54:20] 2025-06-03 18:46:19,233 [wrapper] apfmon messages muted
[2025-06-03 20:54:20] 2025-06-03 18:46:19,263 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:54:20] 2025-06-03 18:46:19,304 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:54:20]  *** Error codes and diagnostics ***
[2025-06-03 20:54:20]     "exeErrorCode": 0,
[2025-06-03 20:54:20]     "exeErrorDiag": "",
[2025-06-03 20:54:20]     "pilotErrorCode": 0,
[2025-06-03 20:54:20]     "pilotErrorDiag": "",
[2025-06-03 20:54:20]  *** Listing of results directory ***
[2025-06-03 20:54:20] total 395820
[2025-06-03 20:54:20] -rw-r--r--. 1 boinc boinc    495897 Jun  2 22:11 pilot3.tar.gz
[2025-06-03 20:54:20] -rw-r--r--. 1 boinc boinc      5111 Jun  2 22:23 queuedata.json
[2025-06-03 20:54:20] -rwx------. 1 boinc boinc     37140 Jun  2 22:24 runpilot2-wrapper.sh
[2025-06-03 20:54:20] -rw-r--r--. 1 boinc boinc       100 Jun  3 16:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:54:20] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 16:37 run_atlas
[2025-06-03 20:54:20] -rw-r--r--. 1 boinc boinc       105 Jun  3 16:37 job.xml
[2025-06-03 20:54:20] -rw-r--r--. 1 boinc boinc      6392 Jun  3 16:37 init_data.xml
[2025-06-03 20:54:20] -rw-r--r--. 2 boinc boinc 214691380 Jun  3 16:37 EVNT.45006593._000439.pool.root.1
[2025-06-03 20:54:20] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:37 start_atlas.sh
[2025-06-03 20:54:20] drwxrwx--x. 2 boinc boinc        68 Jun  3 16:37 shared
[2025-06-03 20:54:20] -rw-r--r--. 2 boinc boinc    508880 Jun  3 16:37 input.tar.gz
[2025-06-03 20:54:20] -rw-r--r--. 1 boinc boinc         0 Jun  3 16:37 boinc_lockfile
[2025-06-03 20:54:20] -rw-r--r--. 1 boinc boinc      2523 Jun  3 16:37 pandaJob.out
[2025-06-03 20:54:20] -rw-------. 1 boinc boinc    982724 Jun  3 16:40 agis_schedconf.cvmfs.json
[2025-06-03 20:54:20] drwx------. 4 boinc boinc      4096 Jun  3 16:41 pilot3
[2025-06-03 20:54:20] -rw-------. 1 boinc boinc 183490554 Jun  3 20:43 HITS.45006595._010976.pool.root.1
[2025-06-03 20:54:20] -rw-r--r--. 1 boinc boinc       531 Jun  3 20:43 boinc_task_state.xml
[2025-06-03 20:54:20] -rw-------. 1 boinc boinc      1021 Jun  3 20:44 memory_monitor_summary.json
[2025-06-03 20:54:20] -rw-------. 1 boinc boinc   1603667 Jun  3 20:44 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:54:20] -rw-------. 1 boinc boinc    403192 Jun  3 20:44 log.45006595._010976.job.log.tgz.1
[2025-06-03 20:54:20] -rw-------. 1 boinc boinc        95 Jun  3 20:45 pilot_heartbeat.json
[2025-06-03 20:54:20] -rw-------. 1 boinc boinc      7692 Jun  3 20:45 heartbeat.json
[2025-06-03 20:54:20] -rw-------. 1 boinc boinc      5067 Jun  3 20:46 pilotlog.txt
[2025-06-03 20:54:20] -rw-------. 1 boinc boinc   1258754 Jun  3 20:46 log.45006595._010976.job.log.1
[2025-06-03 20:54:20] -rw-------. 1 boinc boinc       357 Jun  3 20:46 output.list
[2025-06-03 20:54:20] -rw-r--r--. 1 boinc boinc       620 Jun  3 20:46 runtime_log
[2025-06-03 20:54:20] -rw-------. 1 boinc boinc   1679360 Jun  3 20:46 result.tar.gz
[2025-06-03 20:54:20] -rw-r--r--. 1 boinc boinc      8673 Jun  3 20:46 runtime_log.err
[2025-06-03 20:54:20] -rw-------. 1 boinc boinc       656 Jun  3 20:46 1DZNDm1sQg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSYgKDmnR6tYm.diag
[2025-06-03 20:54:20] -rw-r--r--. 1 boinc boinc      8192 Jun  3 20:54 boinc_mmap_file
[2025-06-03 20:54:20] -rw-r--r--. 1 boinc boinc        28 Jun  3 20:54 wrapper_checkpoint.txt
[2025-06-03 20:54:20] -rw-r--r--. 1 boinc boinc     20616 Jun  3 20:54 stderr.txt
[2025-06-03 20:54:20] HITS file was successfully produced:
[2025-06-03 20:54:20] -rw-------. 1 boinc boinc 183490554 Jun  3 20:43 shared/HITS.pool.root.1
[2025-06-03 20:54:20]  *** Contents of shared directory: ***
[2025-06-03 20:54:20] total 391008
[2025-06-03 20:54:20] -rw-r--r--. 2 boinc boinc 214691380 Jun  3 16:37 ATLAS.root_0
[2025-06-03 20:54:20] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:37 start_atlas.sh
[2025-06-03 20:54:20] -rw-r--r--. 2 boinc boinc    508880 Jun  3 16:37 input.tar.gz
[2025-06-03 20:54:20] -rw-------. 1 boinc boinc 183490554 Jun  3 20:43 HITS.pool.root.1
[2025-06-03 20:54:20] -rw-------. 1 boinc boinc   1679360 Jun  3 20:46 result.tar.gz
20:54:22 (26854): run_atlas exited; CPU time 50859.258742
20:54:22 (26854): called boinc_finish(0)

</stderr_txt>
]]>

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