Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:14:50 (15889): wrapper (7.7.26015): starting
17:14:50 (15889): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 17:14:50] Arguments: --nthreads 8
[2025-06-03 17:14:50] Threads: 8
[2025-06-03 17:14:50] Checking for CVMFS
[2025-06-03 17:14:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:14:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:14:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:14:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:14:52] 2.11.2.0 31726 31934 89828 146743 3 94 13431815 25165824 4498 130560 0 16237536 99.753 19721965 1957 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 17:14:52] CVMFS is ok
[2025-06-03 17:14:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:14:52] Checking for apptainer binary...
[2025-06-03 17:14:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:14:52] Running /usr/bin/apptainer --version
[2025-06-03 17:14:53] apptainer version 1.3.2-1.el7
[2025-06-03 17:14:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:37:04] cg-vwn427.simple-grid.lan
[2025-06-03 17:37:04] apptainer works
[2025-06-03 17:37:04] Set ATHENA_PROC_NUMBER=8
[2025-06-03 17:37:04] Set ATHENA_CORE_NUMBER=8
[2025-06-03 17:37:04] Starting ATLAS job with PandaID=6677443146
[2025-06-03 17:37:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:30:37]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:30:37] 2025-06-03 19:27:08,032 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6677443146/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:30:37] 2025-06-03 19:27:08,033 | INFO     | extracted standard info from prmon json
[2025-06-03 23:30:37] 2025-06-03 19:27:08,033 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:30:37] 2025-06-03 19:27:08,033 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:30:37] 2025-06-03 19:27:08,033 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:30:37] 2025-06-03 19:27:08,033 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:30:37] 2025-06-03 19:27:08,038 | INFO     | fitting pss+swap vs Time
[2025-06-03 23:30:37] 2025-06-03 19:27:08,039 | INFO     | sum of square deviations: 3485088600.0
[2025-06-03 23:30:37] 2025-06-03 19:27:08,041 | INFO     | sum of deviations: -33957700454.000008
[2025-06-03 23:30:37] 2025-06-03 19:27:08,041 | INFO     | mean x: 1748971915.5
[2025-06-03 23:30:37] 2025-06-03 19:27:08,041 | INFO     | mean y: 2517186.1964285714
[2025-06-03 23:30:37] 2025-06-03 19:27:08,041 | INFO     | -- intersect: 17043996249.026457
[2025-06-03 23:30:37] 2025-06-03 19:27:08,041 | INFO     | intersect: 17043996249.026457
[2025-06-03 23:30:37] 2025-06-03 19:27:08,042 | INFO     | chi2: 2.8213896164326804
[2025-06-03 23:30:37] 2025-06-03 19:27:08,042 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 23:30:37] 2025-06-03 19:27:08,044 | INFO     | sum of deviations: -18000105456.00001
[2025-06-03 23:30:37] 2025-06-03 19:27:08,044 | INFO     | mean x: 1748971763.0
[2025-06-03 23:30:37] 2025-06-03 19:27:08,044 | INFO     | mean y: 2527671.228310502
[2025-06-03 23:30:37] 2025-06-03 19:27:08,045 | INFO     | -- intersect: 9668735625.901152
[2025-06-03 23:30:37] 2025-06-03 19:27:08,045 | INFO     | intersect: 9668735625.901152
[2025-06-03 23:30:37] 2025-06-03 19:27:08,045 | INFO     | chi2: 2.06026237194967
[2025-06-03 23:30:37] 2025-06-03 19:27:08,045 | INFO     | current chi2=2.06026237194967 (change=26.977034297211578 %)
[2025-06-03 23:30:37] 2025-06-03 19:27:08,046 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 23:30:37] 2025-06-03 19:27:08,047 | INFO     | sum of deviations: -17156823979.500006
[2025-06-03 23:30:37] 2025-06-03 19:27:08,047 | INFO     | mean x: 1748971610.5
[2025-06-03 23:30:37] 2025-06-03 19:27:08,047 | INFO     | mean y: 2528261.1822429905
[2025-06-03 23:30:37] 2025-06-03 19:27:08,048 | INFO     | -- intersect: 9876898226.160677
[2025-06-03 23:30:37] 2025-06-03 19:27:08,048 | INFO     | intersect: 9876898226.160677
[2025-06-03 23:30:37] 2025-06-03 19:27:08,048 | INFO     | chi2: 2.0593902290503254
[2025-06-03 23:30:37] 2025-06-03 19:27:08,048 | INFO     | current chi2=2.0593902290503254 (change=0.042331642378113044 %)
[2025-06-03 23:30:37] 2025-06-03 19:27:08,048 | INFO     | right removable region: 213
[2025-06-03 23:30:37] 2025-06-03 19:27:08,049 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 23:30:37] 2025-06-03 19:27:08,050 | INFO     | sum of deviations: -76426626110.0
[2025-06-03 23:30:37] 2025-06-03 19:27:08,051 | INFO     | mean x: 1748972068.0
[2025-06-03 23:30:37] 2025-06-03 19:27:08,051 | INFO     | mean y: 2545348.936073059
[2025-06-03 23:30:37] 2025-06-03 19:27:08,051 | INFO     | -- intersect: 41044293236.99038
[2025-06-03 23:30:37] 2025-06-03 19:27:08,051 | INFO     | intersect: 41044293236.99038
[2025-06-03 23:30:37] 2025-06-03 19:27:08,051 | INFO     | chi2: 1.0039372309559587
[2025-06-03 23:30:37] 2025-06-03 19:27:08,051 | INFO     | current chi2=1.0039372309559587 (change=64.41692330939671 %)
[2025-06-03 23:30:37] 2025-06-03 19:27:08,052 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 23:30:37] 2025-06-03 19:27:08,053 | INFO     | sum of deviations: -73543081385.0
[2025-06-03 23:30:37] 2025-06-03 19:27:08,054 | INFO     | mean x: 1748972220.5
[2025-06-03 23:30:37] 2025-06-03 19:27:08,054 | INFO     | mean y: 2543303.420560748
[2025-06-03 23:30:37] 2025-06-03 19:27:08,054 | INFO     | -- intersect: 42329249464.54843
[2025-06-03 23:30:37] 2025-06-03 19:27:08,054 | INFO     | intersect: 42329249464.54843
[2025-06-03 23:30:37] 2025-06-03 19:27:08,054 | INFO     | chi2: 0.9938325858979282
[2025-06-03 23:30:37] 2025-06-03 19:27:08,054 | INFO     | current chi2=0.9938325858979282 (change=1.0065016762461032 %)
[2025-06-03 23:30:37] 2025-06-03 19:27:08,054 | INFO     | left removable region: 20
[2025-06-03 23:30:37] 2025-06-03 19:27:08,055 | INFO     | sum of square deviations: 2229146912.0
[2025-06-03 23:30:37] 2025-06-03 19:27:08,056 | INFO     | sum of deviations: -43983662832.99991
[2025-06-03 23:30:37] 2025-06-03 19:27:08,056 | INFO     | mean x: 1748972190.0
[2025-06-03 23:30:37] 2025-06-03 19:27:08,056 | INFO     | mean y: 2546876.683937824
[2025-06-03 23:30:37] 2025-06-03 19:27:08,057 | INFO     | -- intersect: 34511803622.007614
[2025-06-03 23:30:37] 2025-06-03 19:27:08,057 | INFO     | intersect: 34511803622.007614
[2025-06-03 23:30:37] 2025-06-03 19:27:08,057 | INFO     | chi2: 0.1914665154838451
[2025-06-03 23:30:37] 2025-06-03 19:27:08,057 | INFO     | -- intersect: 34511803622.007614
[2025-06-03 23:30:37] 2025-06-03 19:27:08,057 | INFO     | current memory leak: -19.73 B/s (using 193 data points, chi2=0.19)
[2025-06-03 23:30:37] 2025-06-03 19:27:08,058 | INFO     | ..............................
[2025-06-03 23:30:37] 2025-06-03 19:27:08,058 | INFO     | . Timing measurements:
[2025-06-03 23:30:37] 2025-06-03 19:27:08,058 | INFO     | . get job = 0 s
[2025-06-03 23:30:37] 2025-06-03 19:27:08,059 | INFO     | . initial setup = 2 s
[2025-06-03 23:30:37] 2025-06-03 19:27:08,059 | INFO     | . payload setup = 18 s
[2025-06-03 23:30:37] 2025-06-03 19:27:08,059 | INFO     | . stage-in = 0 s
[2025-06-03 23:30:37] 2025-06-03 19:27:08,059 | INFO     | . payload execution = 13640 s
[2025-06-03 23:30:37] 2025-06-03 19:27:08,059 | INFO     | . stage-out = 3 s
[2025-06-03 23:30:37] 2025-06-03 19:27:08,059 | INFO     | . log creation = 1 s
[2025-06-03 23:30:37] 2025-06-03 19:27:08,059 | INFO     | ..............................
[2025-06-03 23:30:37] 2025-06-03 19:27:08,198 | INFO     | 
[2025-06-03 23:30:37] 2025-06-03 19:27:08,199 | INFO     | job summary report
[2025-06-03 23:30:37] 2025-06-03 19:27:08,199 | INFO     | --------------------------------------------------
[2025-06-03 23:30:37] 2025-06-03 19:27:08,199 | INFO     | PanDA job id: 6677443146
[2025-06-03 23:30:37] 2025-06-03 19:27:08,199 | INFO     | task id: 45006595
[2025-06-03 23:30:37] 2025-06-03 19:27:08,199 | INFO     | errors: (none)
[2025-06-03 23:30:37] 2025-06-03 19:27:08,199 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:30:37] 2025-06-03 19:27:08,199 | INFO     | pilot state: finished 
[2025-06-03 23:30:37] 2025-06-03 19:27:08,200 | INFO     | transexitcode: 0
[2025-06-03 23:30:37] 2025-06-03 19:27:08,200 | INFO     | exeerrorcode: 0
[2025-06-03 23:30:37] 2025-06-03 19:27:08,200 | INFO     | exeerrordiag: 
[2025-06-03 23:30:37] 2025-06-03 19:27:08,200 | INFO     | exitcode: 0
[2025-06-03 23:30:37] 2025-06-03 19:27:08,200 | INFO     | exitmsg: OK
[2025-06-03 23:30:37] 2025-06-03 19:27:08,200 | INFO     | cpuconsumptiontime: 50247 s
[2025-06-03 23:30:37] 2025-06-03 19:27:08,200 | INFO     | nevents: 400
[2025-06-03 23:30:37] 2025-06-03 19:27:08,200 | INFO     | neventsw: 0
[2025-06-03 23:30:37] 2025-06-03 19:27:08,200 | INFO     | pid: 7081
[2025-06-03 23:30:37] 2025-06-03 19:27:08,200 | INFO     | pgrp: 7081
[2025-06-03 23:30:37] 2025-06-03 19:27:08,201 | INFO     | corecount: 8
[2025-06-03 23:30:37] 2025-06-03 19:27:08,201 | INFO     | event service: False
[2025-06-03 23:30:37] 2025-06-03 19:27:08,201 | INFO     | sizes: {0: 2405182, 1: 2405182, 7: 2405416, 11: 2405444, 13662: 2435234, 13666: 2444177, 13669: 2444361, 13751: 2444531}
[2025-06-03 23:30:37] 2025-06-03 19:27:08,201 | INFO     | --------------------------------------------------
[2025-06-03 23:30:37] 2025-06-03 19:27:08,201 | INFO     | 
[2025-06-03 23:30:37] 2025-06-03 19:27:08,201 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-06-03 23:30:37] 2025-06-03 19:27:08,735 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:30:37] 2025-06-03 19:27:08,736 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:30:37] 2025-06-03 19:27:08,736 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:30:37] 2025-06-03 19:27:08,736 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:30:37] 2025-06-03 19:27:08,736 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:30:37] 2025-06-03 19:27:08,736 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:30:37] 2025-06-03 19:27:08,736 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:30:37] 2025-06-03 19:27:08,736 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:30:37] 2025-06-03 19:27:08,736 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:30:37] 2025-06-03 19:27:08,736 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:30:37] 2025-06-03 19:27:08,737 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:30:37] 2025-06-03 19:27:08,737 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:30:37] 2025-06-03 19:27:08,737 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:30:37] 2025-06-03 19:27:08,737 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:30:37] 2025-06-03 19:27:08,737 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:30:37] 2025-06-03 19:27:08,737 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:30:37] 2025-06-03 19:27:08,737 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:30:37] 2025-06-03 19:27:08,737 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:30:37] 2025-06-03 19:27:08,737 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:30:37] 2025-06-03 19:27:08,737 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:30:37] 2025-06-03 19:27:08,738 | INFO     | job 6677443146 has completed (purged errors)
[2025-06-03 23:30:37] 2025-06-03 19:27:08,738 | INFO     | overall cleanup function is called
[2025-06-03 23:30:37] 2025-06-03 19:27:09,748 | INFO     | --- collectZombieJob: --- 10, [7081]
[2025-06-03 23:30:37] 2025-06-03 19:27:09,749 | INFO     | zombie collector waiting for pid 7081
[2025-06-03 23:30:37] 2025-06-03 19:27:09,749 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:30:37] 2025-06-03 19:27:09,749 | INFO     | collected zombie processes
[2025-06-03 23:30:37] 2025-06-03 19:27:09,749 | INFO     | will attempt to kill all subprocesses of pid=7081
[2025-06-03 23:30:37] 2025-06-03 19:27:09,860 | INFO     | process IDs to be killed: [7081] (in reverse order)
[2025-06-03 23:30:37] 2025-06-03 19:27:10,651 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:30:37] 2025-06-03 19:27:10,651 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:30:37] 2025-06-03 19:27:10,655 | INFO     | did not find any defunct processes belonging to 7081
[2025-06-03 23:30:37] 2025-06-03 19:27:10,658 | INFO     | did not find any defunct processes belonging to 7081
[2025-06-03 23:30:37] 2025-06-03 19:27:10,659 | INFO     | ready for new job
[2025-06-03 23:30:37] 2025-06-03 19:27:10,659 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:30:37] 2025-06-03 19:27:10,661 | INFO     | **************************************
[2025-06-03 23:30:37] 2025-06-03 19:27:10,661 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:30:37] 2025-06-03 19:27:10,661 | INFO     | **************************************
[2025-06-03 23:30:37] 2025-06-03 19:27:10,661 | INFO     | 
[2025-06-03 23:30:37] 2025-06-03 19:27:10,662 | INFO     | pilot is running in a VM
[2025-06-03 23:30:37] 2025-06-03 19:27:10,662 | INFO     | architecture information:
[2025-06-03 23:30:37] 2025-06-03 19:27:10,669 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:30:37] 2025-06-03 19:27:10,861 | INFO     | cat /etc/os-release:
[2025-06-03 23:30:37] NAME="CentOS Linux"
[2025-06-03 23:30:37] VERSION="7 (Core)"
[2025-06-03 23:30:37] ID="centos"
[2025-06-03 23:30:37] ID_LIKE="rhel fedora"
[2025-06-03 23:30:37] VERSION_ID="7"
[2025-06-03 23:30:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:30:37] ANSI_COLOR="0;31"
[2025-06-03 23:30:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:30:37] HOME_URL="https://www.centos.org/"
[2025-06-03 23:30:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:30:37] 
[2025-06-03 23:30:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:30:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:30:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:30:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:30:37] 
[2025-06-03 23:30:37] 2025-06-03 19:27:10,862 | INFO     | **************************************
[2025-06-03 23:30:37] 2025-06-03 19:27:11,365 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-06-03 23:30:37] 2025-06-03 19:27:11,567 | INFO     | sufficient remaining disk space (496905486336 B)
[2025-06-03 23:30:37] 2025-06-03 19:27:11,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:30:37] 2025-06-03 19:27:11,567 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:30:37] 2025-06-03 19:27:11,567 | INFO     | update_server=False
[2025-06-03 23:30:37] 2025-06-03 19:27:11,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:30:37] 2025-06-03 19:27:11,569 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:30:37] 2025-06-03 19:27:11,569 | INFO     | aborting loop
[2025-06-03 23:30:37] 2025-06-03 19:27:11,796 | INFO     | all data control threads have been joined
[2025-06-03 23:30:37] 2025-06-03 19:27:12,015 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:30:37] 2025-06-03 19:27:12,015 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:30:37] 2025-06-03 19:27:12,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:30:37] 2025-06-03 19:27:12,234 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:30:37] 2025-06-03 19:27:12,574 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:30:37] 2025-06-03 19:27:12,575 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:30:37] 2025-06-03 19:27:12,636 | INFO     | all payload control threads have been joined
[2025-06-03 23:30:37] 2025-06-03 19:27:12,664 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:30:37] 2025-06-03 19:27:12,790 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:30:37] 2025-06-03 19:27:12,802 | INFO     | [data] control thread has finished
[2025-06-03 23:30:37] 2025-06-03 19:27:12,875 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:30:37] 2025-06-03 19:27:12,992 | INFO     | all job control threads have been joined
[2025-06-03 23:30:37] 2025-06-03 19:27:13,075 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:30:37] 2025-06-03 19:27:13,211 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:30:37] 2025-06-03 19:27:13,396 | INFO     | [job] validate thread has finished
[2025-06-03 23:30:37] 2025-06-03 19:27:13,477 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:30:37] 2025-06-03 19:27:13,643 | INFO     | [payload] control thread has finished
[2025-06-03 23:30:37] 2025-06-03 19:27:13,769 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:30:37] 2025-06-03 19:27:13,842 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:30:37] 2025-06-03 19:27:13,917 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:30:37] 2025-06-03 19:27:13,999 | INFO     | [job] control thread has finished
[2025-06-03 23:30:37] 2025-06-03 19:27:14,218 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:30:37] 2025-06-03 19:27:14,243 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:30:37] 2025-06-03 19:27:17,487 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:30:37] 2025-06-03 19:27:19,332 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140053464569664)>', '<ExcThread(monitor, started 140053003085568)>']
[2025-06-03 23:30:37] 2025-06-03 19:27:20,062 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:30:37] 2025-06-03 19:27:20,063 | INFO     | [monitor] control thread has ended
[2025-06-03 23:30:37] 2025-06-03 19:27:24,356 | INFO     | all workflow threads have been joined
[2025-06-03 23:30:37] 2025-06-03 19:27:24,357 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:30:37] 2025-06-03 19:27:24,357 | INFO     | traces error code: 0
[2025-06-03 23:30:37] 2025-06-03 19:27:24,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:30:37] 2025-06-03 19:27:24,764 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:30:37] 2025-06-03 19:27:24,848 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:30:37] 2025-06-03 19:27:24,895 [wrapper] pilotpid: 30826
[2025-06-03 23:30:37] 2025-06-03 19:27:24,978 [wrapper] Pilot exit status: 0
[2025-06-03 23:30:37] 2025-06-03 19:27:25,475 [wrapper] pandaids: 6677443146
[2025-06-03 23:30:37] 2025-06-03 19:27:26,247 [wrapper] cleanup supervisor_pilot 12212 30827
[2025-06-03 23:30:37] 2025-06-03 19:27:26,330 [wrapper] Test setup, not cleaning
[2025-06-03 23:30:37] 2025-06-03 19:27:26,405 [wrapper] apfmon messages muted
[2025-06-03 23:30:37] 2025-06-03 19:27:26,511 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:30:37] 2025-06-03 19:27:26,577 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:30:37]  *** Error codes and diagnostics ***
[2025-06-03 23:30:37]     "exeErrorCode": 0,
[2025-06-03 23:30:37]     "exeErrorDiag": "",
[2025-06-03 23:30:37]     "pilotErrorCode": 0,
[2025-06-03 23:30:37]     "pilotErrorDiag": "",
[2025-06-03 23:30:37]  *** Listing of results directory ***
[2025-06-03 23:30:37] total 391104
[2025-06-03 23:30:37] -rw-r--r--. 1 boinc boinc    495897 Jun  3 03:51 pilot3.tar.gz
[2025-06-03 23:30:37] -rwx------. 1 boinc boinc     37140 Jun  3 03:52 runpilot2-wrapper.sh
[2025-06-03 23:30:37] -rw-r--r--. 1 boinc boinc      5111 Jun  3 03:52 queuedata.json
[2025-06-03 23:30:37] -rw-r--r--. 1 boinc boinc       100 Jun  3 17:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:30:37] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 17:14 run_atlas
[2025-06-03 23:30:37] -rw-r--r--. 1 boinc boinc       105 Jun  3 17:14 job.xml
[2025-06-03 23:30:37] -rw-r--r--. 1 boinc boinc      6392 Jun  3 17:14 init_data.xml
[2025-06-03 23:30:37] -rw-r--r--. 2 boinc boinc 214169311 Jun  3 17:14 EVNT.45006593._000669.pool.root.1
[2025-06-03 23:30:37] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:14 start_atlas.sh
[2025-06-03 23:30:37] drwxrwx--x. 2 boinc boinc        68 Jun  3 17:14 shared
[2025-06-03 23:30:37] -rw-r--r--. 2 boinc boinc    508870 Jun  3 17:14 input.tar.gz
[2025-06-03 23:30:37] -rw-r--r--. 1 boinc boinc         0 Jun  3 17:14 boinc_lockfile
[2025-06-03 23:30:37] -rw-r--r--. 1 boinc boinc      2523 Jun  3 17:37 pandaJob.out
[2025-06-03 23:30:37] -rw-------. 1 boinc boinc    982716 Jun  3 17:37 agis_schedconf.cvmfs.json
[2025-06-03 23:30:37] drwx------. 4 boinc boinc      4096 Jun  3 17:37 pilot3
[2025-06-03 23:30:37] -rw-------. 1 boinc boinc 179329132 Jun  3 21:24 HITS.45006595._016722.pool.root.1
[2025-06-03 23:30:37] -rw-r--r--. 1 boinc boinc       531 Jun  3 21:24 boinc_task_state.xml
[2025-06-03 23:30:37] -rw-------. 1 boinc boinc      1021 Jun  3 21:25 memory_monitor_summary.json
[2025-06-03 23:30:37] -rw-------. 1 boinc boinc   1603667 Jun  3 21:25 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:30:37] -rw-------. 1 boinc boinc    391864 Jun  3 21:25 log.45006595._016722.job.log.tgz.1
[2025-06-03 23:30:37] -rw-------. 1 boinc boinc        95 Jun  3 21:26 pilot_heartbeat.json
[2025-06-03 23:30:37] -rw-------. 1 boinc boinc      7688 Jun  3 21:27 heartbeat.json
[2025-06-03 23:30:37] -rw-------. 1 boinc boinc      4417 Jun  3 21:27 pilotlog.txt
[2025-06-03 23:30:37] -rw-------. 1 boinc boinc   1193681 Jun  3 21:27 log.45006595._016722.job.log.1
[2025-06-03 23:30:37] -rw-------. 1 boinc boinc       357 Jun  3 21:27 output.list
[2025-06-03 23:30:37] -rw-r--r--. 1 boinc boinc       620 Jun  3 21:27 runtime_log
[2025-06-03 23:30:37] -rw-------. 1 boinc boinc   1607680 Jun  3 21:27 result.tar.gz
[2025-06-03 23:30:37] -rw-r--r--. 1 boinc boinc      8673 Jun  3 21:27 runtime_log.err
[2025-06-03 23:30:37] -rw-------. 1 boinc boinc       656 Jun  3 21:27 rfMMDmd0Vg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZShKDm5yW7lm.diag
[2025-06-03 23:30:37] -rw-r--r--. 1 boinc boinc      8192 Jun  3 23:30 boinc_mmap_file
[2025-06-03 23:30:37] -rw-r--r--. 1 boinc boinc        28 Jun  3 23:30 wrapper_checkpoint.txt
[2025-06-03 23:30:37] -rw-r--r--. 1 boinc boinc     20481 Jun  3 23:30 stderr.txt
[2025-06-03 23:30:37] HITS file was successfully produced:
[2025-06-03 23:30:37] -rw-------. 1 boinc boinc 179329132 Jun  3 21:24 shared/HITS.pool.root.1
[2025-06-03 23:30:37]  *** Contents of shared directory: ***
[2025-06-03 23:30:37] total 386368
[2025-06-03 23:30:37] -rw-r--r--. 2 boinc boinc 214169311 Jun  3 17:14 ATLAS.root_0
[2025-06-03 23:30:37] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:14 start_atlas.sh
[2025-06-03 23:30:37] -rw-r--r--. 2 boinc boinc    508870 Jun  3 17:14 input.tar.gz
[2025-06-03 23:30:37] -rw-------. 1 boinc boinc 179329132 Jun  3 21:24 HITS.pool.root.1
[2025-06-03 23:30:37] -rw-------. 1 boinc boinc   1607680 Jun  3 21:27 result.tar.gz
23:30:39 (15889): run_atlas exited; CPU time 50421.311569
23:30:39 (15889): called boinc_finish(0)

</stderr_txt>
]]>

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