Name sGCNDmjnVg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2PhKDmSNhJfn_1
Workunit 232798594
Created 3 Jun 2025, 3:55:41 UTC
Sent 3 Jun 2025, 5:27:53 UTC
Report deadline 11 Jun 2025, 5:27:53 UTC
Received 5 Jun 2025, 1:39:21 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10855856
Run time 8 min 6 sec
CPU time 8 hours 39 min 11 sec
Validate state Valid
Credit 29.33
Device peak FLOPS 16.53 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.48 GB
Peak swap size 2.81 GB
Peak disk usage 536.07 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:50:12 (1538487): wrapper (7.7.26015): starting
23:50:12 (1538487): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 23:50:12] Arguments: --nthreads 4
[2025-06-04 23:50:12] Threads: 4
[2025-06-04 23:50:12] Checking for CVMFS
[2025-06-04 23:50:12] No cvmfs_config command found, will try listing directly
[2025-06-04 23:50:12] CVMFS is ok
[2025-06-04 23:50:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 23:50:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 23:50:12] Further information can be found at the LHC@home message board.
[2025-06-04 23:50:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:50:12] Checking for apptainer binary...
[2025-06-04 23:50:12] which: no apptainer in ((null))
[2025-06-04 23:50:12] apptainer is not installed, using version from CVMFS
[2025-06-04 23:50:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:50:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-06-04 23:50:12] apptainer works
[2025-06-04 23:50:12] Set ATHENA_PROC_NUMBER=4
[2025-06-04 23:50:12] Set ATHENA_CORE_NUMBER=4
[2025-06-04 23:50:12] Starting ATLAS job with PandaID=6677442898
[2025-06-04 23:50:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:37:57]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:37:57] 2025-06-05 00:36:03,818 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 02:37:57] 2025-06-05 00:36:03,818 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 02:37:57] 2025-06-05 00:36:03,819 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 02:37:57] 2025-06-05 00:36:03,819 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 02:37:57] 2025-06-05 00:36:03,823 | INFO     | fitting pss+swap vs Time
[2025-06-05 02:37:57] 2025-06-05 00:36:03,824 | INFO     | sum of square deviations: 1342841922.0
[2025-06-05 02:37:57] 2025-06-05 00:36:03,825 | INFO     | sum of deviations: 14999949776.000004
[2025-06-05 02:37:57] 2025-06-05 00:36:03,826 | INFO     | mean x: 1749078794.0
[2025-06-05 02:37:57] 2025-06-05 00:36:03,826 | INFO     | mean y: 2286029.061349693
[2025-06-05 02:37:57] 2025-06-05 00:36:03,826 | INFO     | -- intersect: -19535452281.33574
[2025-06-05 02:37:57] 2025-06-05 00:36:03,826 | INFO     | intersect: -19535452281.33574
[2025-06-05 02:37:57] 2025-06-05 00:36:03,826 | INFO     | chi2: 2.343423591646822
[2025-06-05 02:37:57] 2025-06-05 00:36:03,827 | INFO     | sum of square deviations: 1223016419.5
[2025-06-05 02:37:57] 2025-06-05 00:36:03,828 | INFO     | sum of deviations: 23654792463.0
[2025-06-05 02:37:57] 2025-06-05 00:36:03,828 | INFO     | mean x: 1749078641.5
[2025-06-05 02:37:57] 2025-06-05 00:36:03,828 | INFO     | mean y: 2296749.2151898732
[2025-06-05 02:37:57] 2025-06-05 00:36:03,828 | INFO     | -- intersect: -33827250921.99535
[2025-06-05 02:37:57] 2025-06-05 00:36:03,828 | INFO     | intersect: -33827250921.99535
[2025-06-05 02:37:57] 2025-06-05 00:36:03,828 | INFO     | chi2: 1.6795762314022606
[2025-06-05 02:37:57] 2025-06-05 00:36:03,829 | INFO     | current chi2=1.6795762314022606 (change=28.328099222473384 %)
[2025-06-05 02:37:57] 2025-06-05 00:36:03,829 | INFO     | sum of square deviations: 1110539892.0
[2025-06-05 02:37:57] 2025-06-05 00:36:03,830 | INFO     | sum of deviations: 22825643802.0
[2025-06-05 02:37:57] 2025-06-05 00:36:03,830 | INFO     | mean x: 1749078489.0
[2025-06-05 02:37:57] 2025-06-05 00:36:03,830 | INFO     | mean y: 2295624.6535947714
[2025-06-05 02:37:57] 2025-06-05 00:36:03,830 | INFO     | -- intersect: -35947644453.36963
[2025-06-05 02:37:57] 2025-06-05 00:36:03,830 | INFO     | intersect: -35947644453.36963
[2025-06-05 02:37:57] 2025-06-05 00:36:03,831 | INFO     | chi2: 1.681347650497227
[2025-06-05 02:37:57] 2025-06-05 00:36:03,831 | INFO     | current chi2=1.681347650497227 (change=-0.10546821643738756 %)
[2025-06-05 02:37:57] 2025-06-05 00:36:03,831 | INFO     | right removable region: 152
[2025-06-05 02:37:57] 2025-06-05 00:36:03,831 | INFO     | sum of square deviations: 1223016419.5
[2025-06-05 02:37:57] 2025-06-05 00:36:03,833 | INFO     | sum of deviations: -11204455661.0
[2025-06-05 02:37:57] 2025-06-05 00:36:03,833 | INFO     | mean x: 1749078946.5
[2025-06-05 02:37:57] 2025-06-05 00:36:03,833 | INFO     | mean y: 2318985.5569620254
[2025-06-05 02:37:57] 2025-06-05 00:36:03,833 | INFO     | -- intersect: 16026206474.867847
[2025-06-05 02:37:57] 2025-06-05 00:36:03,833 | INFO     | intersect: 16026206474.867847
[2025-06-05 02:37:57] 2025-06-05 00:36:03,833 | INFO     | chi2: 0.7049058559753383
[2025-06-05 02:37:57] 2025-06-05 00:36:03,834 | INFO     | current chi2=0.7049058559753383 (change=69.91982761938607 %)
[2025-06-05 02:37:57] 2025-06-05 00:36:03,834 | INFO     | sum of square deviations: 1110539892.0
[2025-06-05 02:37:57] 2025-06-05 00:36:03,835 | INFO     | sum of deviations: -10441173396.999998
[2025-06-05 02:37:57] 2025-06-05 00:36:03,835 | INFO     | mean x: 1749079099.0
[2025-06-05 02:37:57] 2025-06-05 00:36:03,835 | INFO     | mean y: 2317915.477124183
[2025-06-05 02:37:57] 2025-06-05 00:36:03,835 | INFO     | -- intersect: 16446966405.175434
[2025-06-05 02:37:57] 2025-06-05 00:36:03,835 | INFO     | intersect: 16446966405.175434
[2025-06-05 02:37:57] 2025-06-05 00:36:03,836 | INFO     | chi2: 0.7011511650648299
[2025-06-05 02:37:57] 2025-06-05 00:36:03,836 | INFO     | current chi2=0.7011511650648299 (change=0.5326513999962794 %)
[2025-06-05 02:37:57] 2025-06-05 00:36:03,836 | INFO     | left removable region: 20
[2025-06-05 02:37:57] 2025-06-05 00:36:03,836 | INFO     | sum of square deviations: 713140813.0
[2025-06-05 02:37:57] 2025-06-05 00:36:03,837 | INFO     | sum of deviations: 1777270990.0
[2025-06-05 02:37:57] 2025-06-05 00:36:03,837 | INFO     | mean x: 1749079068.5
[2025-06-05 02:37:57] 2025-06-05 00:36:03,837 | INFO     | mean y: 2324548.893939394
[2025-06-05 02:37:57] 2025-06-05 00:36:03,837 | INFO     | -- intersect: -4356684823.4406
[2025-06-05 02:37:57] 2025-06-05 00:36:03,837 | INFO     | intersect: -4356684823.4406
[2025-06-05 02:37:57] 2025-06-05 00:36:03,838 | INFO     | chi2: 0.0004534241342509396
[2025-06-05 02:37:57] 2025-06-05 00:36:03,838 | INFO     | -- intersect: -4356684823.4406
[2025-06-05 02:37:57] 2025-06-05 00:36:03,838 | INFO     | current memory leak: 2.49 B/s (using 132 data points, chi2=0.00)
[2025-06-05 02:37:57] 2025-06-05 00:36:03,839 | INFO     | ..............................
[2025-06-05 02:37:57] 2025-06-05 00:36:03,839 | INFO     | . Timing measurements:
[2025-06-05 02:37:57] 2025-06-05 00:36:03,839 | INFO     | . get job = 0 s
[2025-06-05 02:37:57] 2025-06-05 00:36:03,839 | INFO     | . initial setup = 1 s
[2025-06-05 02:37:57] 2025-06-05 00:36:03,839 | INFO     | . payload setup = 8 s
[2025-06-05 02:37:57] 2025-06-05 00:36:03,839 | INFO     | . stage-in = 0 s
[2025-06-05 02:37:57] 2025-06-05 00:36:03,839 | INFO     | . payload execution = 9905 s
[2025-06-05 02:37:57] 2025-06-05 00:36:03,839 | INFO     | . stage-out = 0 s
[2025-06-05 02:37:57] 2025-06-05 00:36:03,839 | INFO     | . log creation = 0 s
[2025-06-05 02:37:57] 2025-06-05 00:36:03,840 | INFO     | ..............................
[2025-06-05 02:37:57] 2025-06-05 00:36:04,147 | INFO     | 
[2025-06-05 02:37:57] 2025-06-05 00:36:04,148 | INFO     | job summary report
[2025-06-05 02:37:57] 2025-06-05 00:36:04,148 | INFO     | --------------------------------------------------
[2025-06-05 02:37:57] 2025-06-05 00:36:04,148 | INFO     | PanDA job id: 6677442898
[2025-06-05 02:37:57] 2025-06-05 00:36:04,148 | INFO     | task id: 45006595
[2025-06-05 02:37:57] 2025-06-05 00:36:04,148 | INFO     | errors: (none)
[2025-06-05 02:37:57] 2025-06-05 00:36:04,148 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:37:57] 2025-06-05 00:36:04,148 | INFO     | pilot state: finished 
[2025-06-05 02:37:57] 2025-06-05 00:36:04,148 | INFO     | transexitcode: 0
[2025-06-05 02:37:57] 2025-06-05 00:36:04,148 | INFO     | exeerrorcode: 0
[2025-06-05 02:37:57] 2025-06-05 00:36:04,148 | INFO     | exeerrordiag: 
[2025-06-05 02:37:57] 2025-06-05 00:36:04,149 | INFO     | exitcode: 0
[2025-06-05 02:37:57] 2025-06-05 00:36:04,149 | INFO     | exitmsg: OK
[2025-06-05 02:37:57] 2025-06-05 00:36:04,149 | INFO     | cpuconsumptiontime: 37800 s
[2025-06-05 02:37:57] 2025-06-05 00:36:04,149 | INFO     | nevents: 400
[2025-06-05 02:37:57] 2025-06-05 00:36:04,149 | INFO     | neventsw: 0
[2025-06-05 02:37:57] 2025-06-05 00:36:04,149 | INFO     | pid: 1549158
[2025-06-05 02:37:57] 2025-06-05 00:36:04,149 | INFO     | pgrp: 1549158
[2025-06-05 02:37:57] 2025-06-05 00:36:04,149 | INFO     | corecount: 4
[2025-06-05 02:37:57] 2025-06-05 00:36:04,149 | INFO     | event service: False
[2025-06-05 02:37:57] 2025-06-05 00:36:04,149 | INFO     | sizes: {0: 2397351, 1: 2397351, 5: 2397585, 11: 2397641, 9917: 2425902, 9918: 2425901, 9919: 2435104, 9924: 2435218}
[2025-06-05 02:37:57] 2025-06-05 00:36:04,149 | INFO     | --------------------------------------------------
[2025-06-05 02:37:57] 2025-06-05 00:36:04,150 | INFO     | 
[2025-06-05 02:37:57] 2025-06-05 00:36:04,150 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-06-05 02:37:57] 2025-06-05 00:36:04,175 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:37:57] 2025-06-05 00:36:04,176 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:37:57] 2025-06-05 00:36:04,176 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:37:57] 2025-06-05 00:36:04,176 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:37:57] 2025-06-05 00:36:04,176 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:37:57] 2025-06-05 00:36:04,176 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:37:57] 2025-06-05 00:36:04,177 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:37:57] 2025-06-05 00:36:04,177 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:37:57] 2025-06-05 00:36:04,177 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:37:57] 2025-06-05 00:36:04,177 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:37:57] 2025-06-05 00:36:04,177 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:37:57] 2025-06-05 00:36:04,177 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:37:57] 2025-06-05 00:36:04,177 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:37:57] 2025-06-05 00:36:04,177 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:37:57] 2025-06-05 00:36:04,177 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:37:57] 2025-06-05 00:36:04,178 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:37:57] 2025-06-05 00:36:04,178 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:37:57] 2025-06-05 00:36:04,178 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:37:57] 2025-06-05 00:36:04,178 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:37:57] 2025-06-05 00:36:04,178 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:37:57] 2025-06-05 00:36:04,178 | INFO     | job 6677442898 has completed (purged errors)
[2025-06-05 02:37:57] 2025-06-05 00:36:04,178 | INFO     | overall cleanup function is called
[2025-06-05 02:37:57] 2025-06-05 00:36:04,433 | INFO     | PID=1542175 has CPU usage=15.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 02:37:57] 2025-06-05 00:36:04,433 | INFO     | .. there are 7 such processes running
[2025-06-05 02:37:57] 2025-06-05 00:36:05,187 | INFO     | --- collectZombieJob: --- 10, [1549158]
[2025-06-05 02:37:57] 2025-06-05 00:36:05,188 | INFO     | zombie collector waiting for pid 1549158
[2025-06-05 02:37:57] 2025-06-05 00:36:05,188 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:37:57] 2025-06-05 00:36:05,188 | INFO     | collected zombie processes
[2025-06-05 02:37:57] 2025-06-05 00:36:05,188 | INFO     | will attempt to kill all subprocesses of pid=1549158
[2025-06-05 02:37:57] 2025-06-05 00:36:05,572 | INFO     | process IDs to be killed: [1549158] (in reverse order)
[2025-06-05 02:37:57] 2025-06-05 00:36:05,690 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:37:57] 2025-06-05 00:36:05,691 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:37:57] 2025-06-05 00:36:05,704 | INFO     | did not find any defunct processes belonging to 1549158
[2025-06-05 02:37:57] 2025-06-05 00:36:05,717 | INFO     | did not find any defunct processes belonging to 1549158
[2025-06-05 02:37:57] 2025-06-05 00:36:05,718 | INFO     | ready for new job
[2025-06-05 02:37:57] 2025-06-05 00:36:05,718 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:37:57] 2025-06-05 00:36:05,720 | INFO     | **************************************
[2025-06-05 02:37:57] 2025-06-05 00:36:05,720 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:37:57] 2025-06-05 00:36:05,720 | INFO     | **************************************
[2025-06-05 02:37:57] 2025-06-05 00:36:05,720 | INFO     | 
[2025-06-05 02:37:57] 2025-06-05 00:36:05,725 | INFO     | architecture information:
[2025-06-05 02:37:57] 2025-06-05 00:36:05,725 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:37:57] 2025-06-05 00:36:05,743 | INFO     | cat /etc/os-release:
[2025-06-05 02:37:57] NAME="CentOS Linux"
[2025-06-05 02:37:57] VERSION="7 (Core)"
[2025-06-05 02:37:57] ID="centos"
[2025-06-05 02:37:57] ID_LIKE="rhel fedora"
[2025-06-05 02:37:57] VERSION_ID="7"
[2025-06-05 02:37:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:37:57] ANSI_COLOR="0;31"
[2025-06-05 02:37:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:37:57] HOME_URL="https://www.centos.org/"
[2025-06-05 02:37:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:37:57] 
[2025-06-05 02:37:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:37:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:37:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:37:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:37:57] 
[2025-06-05 02:37:57] 2025-06-05 00:36:05,744 | INFO     | **************************************
[2025-06-05 02:37:57] 2025-06-05 00:36:06,247 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-06-05 02:37:57] 2025-06-05 00:36:06,265 | INFO     | sufficient remaining disk space (652123045888 B)
[2025-06-05 02:37:57] 2025-06-05 00:36:06,266 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:37:57] 2025-06-05 00:36:06,266 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:37:57] 2025-06-05 00:36:06,266 | INFO     | update_server=False
[2025-06-05 02:37:57] 2025-06-05 00:36:06,266 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:37:57] 2025-06-05 00:36:06,267 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:37:57] 2025-06-05 00:36:06,439 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:37:57] 2025-06-05 00:36:06,439 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:37:57] 2025-06-05 00:36:06,439 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:37:57] 2025-06-05 00:36:06,745 | INFO     | all data control threads have been joined
[2025-06-05 02:37:57] 2025-06-05 00:36:06,749 | INFO     | all job control threads have been joined
[2025-06-05 02:37:57] 2025-06-05 00:36:06,938 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:37:57] 2025-06-05 00:36:06,939 | INFO     | aborting loop
[2025-06-05 02:37:57] 2025-06-05 00:36:07,223 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:37:57] 2025-06-05 00:36:07,272 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:37:57] 2025-06-05 00:36:07,448 | INFO     | all payload control threads have been joined
[2025-06-05 02:37:57] 2025-06-05 00:36:07,747 | INFO     | [data] control thread has finished
[2025-06-05 02:37:57] 2025-06-05 00:36:07,754 | INFO     | [job] control thread has finished
[2025-06-05 02:37:57] 2025-06-05 00:36:07,850 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:37:57] 2025-06-05 00:36:07,944 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:37:57] 2025-06-05 00:36:08,141 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:37:57] 2025-06-05 00:36:08,451 | INFO     | [payload] control thread has finished
[2025-06-05 02:37:57] 2025-06-05 00:36:08,514 | INFO     | [job] validate thread has finished
[2025-06-05 02:37:57] 2025-06-05 00:36:08,602 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:37:57] 2025-06-05 00:36:08,690 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:37:57] 2025-06-05 00:36:08,726 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:37:57] 2025-06-05 00:36:08,810 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:37:57] 2025-06-05 00:36:08,974 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:37:57] 2025-06-05 00:36:09,229 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:37:57] 2025-06-05 00:36:09,979 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:37:57] 2025-06-05 00:36:10,273 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:37:57] 2025-06-05 00:36:16,825 | INFO     | job.realtimelogging is not enabled
[2025-06-05 02:37:57] 2025-06-05 00:36:17,830 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:37:57] 2025-06-05 00:36:17,880 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22760359761728)>', '<ExcThread(monitor, started 22760117987072)>']
[2025-06-05 02:37:57] 2025-06-05 00:36:18,498 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:37:57] 2025-06-05 00:36:18,499 | INFO     | [monitor] control thread has ended
[2025-06-05 02:37:57] 2025-06-05 00:36:22,899 | INFO     | all workflow threads have been joined
[2025-06-05 02:37:57] 2025-06-05 00:36:22,899 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:37:57] 2025-06-05 00:36:22,899 | INFO     | traces error code: 0
[2025-06-05 02:37:57] 2025-06-05 00:36:22,900 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:37:57] 2025-06-05 00:36:23,116 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:37:57] 2025-06-05 00:36:23,119 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:37:57] 2025-06-05 00:36:23,122 [wrapper] pilotpid: 1542175
[2025-06-05 02:37:57] 2025-06-05 00:36:23,124 [wrapper] Pilot exit status: 0
[2025-06-05 02:37:57] 2025-06-05 00:36:23,136 [wrapper] pandaids: 6677442898
[2025-06-05 02:37:57] 2025-06-05 00:36:23,214 [wrapper] cleanup supervisor_pilot 1798201 1542176
[2025-06-05 02:37:57] 2025-06-05 00:36:23,217 [wrapper] Test setup, not cleaning
[2025-06-05 02:37:57] 2025-06-05 00:36:23,221 [wrapper] apfmon messages muted
[2025-06-05 02:37:57] 2025-06-05 00:36:23,224 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:37:57] 2025-06-05 00:36:23,227 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:37:57]  *** Error codes and diagnostics ***
[2025-06-05 02:37:57]     "exeErrorCode": 0,
[2025-06-05 02:37:57]     "exeErrorDiag": "",
[2025-06-05 02:37:57]     "pilotErrorCode": 0,
[2025-06-05 02:37:57]     "pilotErrorDiag": "",
[2025-06-05 02:37:57]  *** Listing of results directory ***
[2025-06-05 02:37:57] total 394744
[2025-06-05 02:37:57] -rw-r--r-- 1 boinc boinc    495897 Jun  3 03:24 pilot3.tar.gz
[2025-06-05 02:37:57] -rw-r--r-- 1 boinc boinc      5111 Jun  3 03:39 queuedata.json
[2025-06-05 02:37:57] -rwx------ 1 boinc boinc     37140 Jun  3 03:39 runpilot2-wrapper.sh
[2025-06-05 02:37:57] -rw-r--r-- 1 boinc boinc       100 Jun  4 23:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:37:57] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 23:50 run_atlas
[2025-06-05 02:37:57] -rw-r--r-- 1 boinc boinc       105 Jun  4 23:50 job.xml
[2025-06-05 02:37:57] -rw-r--r-- 1 boinc boinc      6632 Jun  4 23:50 init_data.xml
[2025-06-05 02:37:57] -rw-r--r-- 2 boinc boinc 216661976 Jun  4 23:50 EVNT.45006593._000660.pool.root.1
[2025-06-05 02:37:57] -rw-r--r-- 2 boinc boinc     15093 Jun  4 23:50 start_atlas.sh
[2025-06-05 02:37:57] drwxrwx--x 2 boinc boinc      4096 Jun  4 23:50 shared
[2025-06-05 02:37:57] -rw-r--r-- 2 boinc boinc    508882 Jun  4 23:50 input.tar.gz
[2025-06-05 02:37:57] -rw-r--r-- 1 boinc boinc         0 Jun  4 23:50 boinc_lockfile
[2025-06-05 02:37:57] -rw-r--r-- 1 boinc boinc      2524 Jun  4 23:50 pandaJob.out
[2025-06-05 02:37:57] -rw------- 1 boinc boinc    987032 Jun  4 23:50 agis_schedconf.cvmfs.json
[2025-06-05 02:37:57] -rw------- 1 boinc boinc   1598969 Jun  4 23:50 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:37:57] drwx------ 4 boinc boinc      4096 Jun  4 23:50 pilot3
[2025-06-05 02:37:57] -rw------- 1 boinc boinc 181240152 Jun  5 02:35 HITS.45006595._016496.pool.root.1
[2025-06-05 02:37:57] -rw------- 1 boinc boinc      1034 Jun  5 02:35 memory_monitor_summary.json
[2025-06-05 02:37:57] -rw-r--r-- 1 boinc boinc       528 Jun  5 02:35 boinc_task_state.xml
[2025-06-05 02:37:57] -rw------- 1 boinc boinc    303152 Jun  5 02:35 log.45006595._016496.job.log.tgz.1
[2025-06-05 02:37:57] -rw------- 1 boinc boinc        95 Jun  5 02:35 pilot_heartbeat.json
[2025-06-05 02:37:57] -rw------- 1 boinc boinc      7715 Jun  5 02:36 heartbeat.json
[2025-06-05 02:37:57] -rw------- 1 boinc boinc      4435 Jun  5 02:36 pilotlog.txt
[2025-06-05 02:37:57] -rw------- 1 boinc boinc    937575 Jun  5 02:36 log.45006595._016496.job.log.1
[2025-06-05 02:37:57] -rw------- 1 boinc boinc       357 Jun  5 02:36 output.list
[2025-06-05 02:37:57] -rw-r--r-- 1 boinc boinc       620 Jun  5 02:36 runtime_log
[2025-06-05 02:37:57] -rw------- 1 boinc boinc   1259520 Jun  5 02:36 result.tar.gz
[2025-06-05 02:37:57] -rw------- 1 boinc boinc       662 Jun  5 02:36 sGCNDmjnVg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2PhKDmSNhJfn.diag
[2025-06-05 02:37:57] -rw-r--r-- 1 boinc boinc      9025 Jun  5 02:36 runtime_log.err
[2025-06-05 02:37:57] -rw-r--r-- 1 boinc boinc        27 Jun  5 02:37 wrapper_checkpoint.txt
[2025-06-05 02:37:57] -rw-r--r-- 1 boinc boinc      8192 Jun  5 02:37 boinc_mmap_file
[2025-06-05 02:37:57] -rw-r--r-- 1 boinc boinc     20637 Jun  5 02:37 stderr.txt
[2025-06-05 02:37:57] HITS file was successfully produced:
[2025-06-05 02:37:57] -rw------- 1 boinc boinc 181240152 Jun  5 02:35 shared/HITS.pool.root.1
[2025-06-05 02:37:57]  *** Contents of shared directory: ***
[2025-06-05 02:37:57] total 390336
[2025-06-05 02:37:57] -rw-r--r-- 2 boinc boinc 216661976 Jun  4 23:50 ATLAS.root_0
[2025-06-05 02:37:57] -rw-r--r-- 2 boinc boinc     15093 Jun  4 23:50 start_atlas.sh
[2025-06-05 02:37:57] -rw-r--r-- 2 boinc boinc    508882 Jun  4 23:50 input.tar.gz
[2025-06-05 02:37:57] -rw------- 1 boinc boinc 181240152 Jun  5 02:35 HITS.pool.root.1
[2025-06-05 02:37:57] -rw------- 1 boinc boinc   1259520 Jun  5 02:36 result.tar.gz
02:37:59 (1538487): run_atlas exited; CPU time 38245.089303
02:37:59 (1538487): called boinc_finish(0)

</stderr_txt>
]]>


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