Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:24:39 (2856291): wrapper (7.7.26015): starting
01:24:39 (2856291): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 01:24:39] Arguments: --nthreads 8
[2025-06-03 01:24:39] Threads: 8
[2025-06-03 01:24:39] Checking for CVMFS
[2025-06-03 01:24:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 01:24:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 01:24:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 01:24:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 01:24:40] 2.12.6.0 2291867 21401 277816 146731 1 186 29697464 40960000 5433 16776704 0 66874084 99.739 60347187 30951 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 01:24:40] CVMFS is ok
[2025-06-03 01:24:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 01:24:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 01:24:40] Further information can be found at the LHC@home message board.
[2025-06-03 01:24:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 01:24:40] Checking for apptainer binary...
[2025-06-03 01:24:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 01:24:40] Running /usr/bin/apptainer --version
[2025-06-03 01:24:40] apptainer version 1.4.1-1.el9
[2025-06-03 01:24:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 01:24:40] c6-8-12-1.aglt2.org
[2025-06-03 01:24:40] apptainer works
[2025-06-03 01:24:40] Set ATHENA_PROC_NUMBER=8
[2025-06-03 01:24:40] Set ATHENA_CORE_NUMBER=8
[2025-06-03 01:24:40] Starting ATLAS job with PandaID=6669443549
[2025-06-03 01:24:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 03:12:42]  *** The last 200 lines of the pilot log: ***
[2025-06-03 03:12:42] 2025-06-03 07:12:22,964 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 03:12:42] 2025-06-03 07:12:22,964 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 03:12:42] 2025-06-03 07:12:22,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 03:12:42] 2025-06-03 07:12:22,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 03:12:42] 2025-06-03 07:12:22,966 | INFO     | fitting pss+swap vs Time
[2025-06-03 03:12:42] 2025-06-03 07:12:22,966 | INFO     | sum of square deviations: 369281342.5
[2025-06-03 03:12:42] 2025-06-03 07:12:22,966 | INFO     | sum of deviations: 25392778477.0
[2025-06-03 03:12:42] 2025-06-03 07:12:22,966 | INFO     | mean x: 1748931516.5
[2025-06-03 03:12:42] 2025-06-03 07:12:22,966 | INFO     | mean y: 2063704.433962264
[2025-06-03 03:12:42] 2025-06-03 07:12:22,966 | INFO     | -- intersect: -120259171995.35818
[2025-06-03 03:12:42] 2025-06-03 07:12:22,966 | INFO     | intersect: -120259171995.35818
[2025-06-03 03:12:42] 2025-06-03 07:12:22,967 | INFO     | chi2: 4.419646877116938
[2025-06-03 03:12:42] 2025-06-03 07:12:22,967 | INFO     | sum of square deviations: 319447850.0
[2025-06-03 03:12:42] 2025-06-03 07:12:22,967 | INFO     | sum of deviations: 30801651404.999996
[2025-06-03 03:12:42] 2025-06-03 07:12:22,967 | INFO     | mean x: 1748931364.0
[2025-06-03 03:12:42] 2025-06-03 07:12:22,967 | INFO     | mean y: 2079575.1683168316
[2025-06-03 03:12:42] 2025-06-03 07:12:22,967 | INFO     | -- intersect: -168632563623.08505
[2025-06-03 03:12:42] 2025-06-03 07:12:22,967 | INFO     | intersect: -168632563623.08505
[2025-06-03 03:12:42] 2025-06-03 07:12:22,967 | INFO     | chi2: 3.566436387794121
[2025-06-03 03:12:42] 2025-06-03 07:12:22,967 | INFO     | current chi2=3.566436387794121 (change=19.304947047701482 %)
[2025-06-03 03:12:42] 2025-06-03 07:12:22,967 | INFO     | right removable region: 100
[2025-06-03 03:12:42] 2025-06-03 07:12:22,967 | INFO     | sum of square deviations: 319447850.0
[2025-06-03 03:12:42] 2025-06-03 07:12:22,968 | INFO     | sum of deviations: 3693858416.000001
[2025-06-03 03:12:42] 2025-06-03 07:12:22,968 | INFO     | mean x: 1748931669.0
[2025-06-03 03:12:42] 2025-06-03 07:12:22,968 | INFO     | mean y: 2129761.623762376
[2025-06-03 03:12:42] 2025-06-03 07:12:22,968 | INFO     | -- intersect: -20221221137.574894
[2025-06-03 03:12:42] 2025-06-03 07:12:22,968 | INFO     | intersect: -20221221137.574894
[2025-06-03 03:12:42] 2025-06-03 07:12:22,968 | INFO     | chi2: 1.9664626324443872
[2025-06-03 03:12:42] 2025-06-03 07:12:22,968 | INFO     | current chi2=1.9664626324443872 (change=55.50634050367464 %)
[2025-06-03 03:12:42] 2025-06-03 07:12:22,968 | INFO     | sum of square deviations: 274312120.0
[2025-06-03 03:12:42] 2025-06-03 07:12:22,968 | INFO     | sum of deviations: -8546157980.5
[2025-06-03 03:12:42] 2025-06-03 07:12:22,968 | INFO     | mean x: 1748931821.5
[2025-06-03 03:12:42] 2025-06-03 07:12:22,968 | INFO     | mean y: 2170729.84375
[2025-06-03 03:12:42] 2025-06-03 07:12:22,968 | INFO     | -- intersect: 54489911350.501076
[2025-06-03 03:12:42] 2025-06-03 07:12:22,968 | INFO     | intersect: 54489911350.501076
[2025-06-03 03:12:42] 2025-06-03 07:12:22,969 | INFO     | chi2: 1.1030633309049058
[2025-06-03 03:12:42] 2025-06-03 07:12:22,969 | INFO     | current chi2=1.1030633309049058 (change=43.906214503870004 %)
[2025-06-03 03:12:42] 2025-06-03 07:12:22,969 | INFO     | sum of square deviations: 233641590.0
[2025-06-03 03:12:42] 2025-06-03 07:12:22,969 | INFO     | sum of deviations: -13357463593.000004
[2025-06-03 03:12:42] 2025-06-03 07:12:22,969 | INFO     | mean x: 1748931974.0
[2025-06-03 03:12:42] 2025-06-03 07:12:22,969 | INFO     | mean y: 2188695.054945055
[2025-06-03 03:12:42] 2025-06-03 07:12:22,969 | INFO     | -- intersect: 99989931328.28488
[2025-06-03 03:12:42] 2025-06-03 07:12:22,969 | INFO     | intersect: 99989931328.28488
[2025-06-03 03:12:42] 2025-06-03 07:12:22,969 | INFO     | chi2: 0.8891111326989438
[2025-06-03 03:12:42] 2025-06-03 07:12:22,969 | INFO     | current chi2=0.8891111326989438 (change=19.396184444862726 %)
[2025-06-03 03:12:42] 2025-06-03 07:12:22,969 | INFO     | left removable region: 30
[2025-06-03 03:12:42] 2025-06-03 07:12:22,969 | INFO     | sum of square deviations: 106336877.5
[2025-06-03 03:12:42] 2025-06-03 07:12:22,969 | INFO     | sum of deviations: -5033451142.5
[2025-06-03 03:12:42] 2025-06-03 07:12:22,969 | INFO     | mean x: 1748932248.5
[2025-06-03 03:12:42] 2025-06-03 07:12:22,969 | INFO     | mean y: 2204546.7285714285
[2025-06-03 03:12:42] 2025-06-03 07:12:22,970 | INFO     | -- intersect: 82787831051.20647
[2025-06-03 03:12:42] 2025-06-03 07:12:22,970 | INFO     | intersect: 82787831051.20647
[2025-06-03 03:12:42] 2025-06-03 07:12:22,970 | INFO     | chi2: 0.021857634313834057
[2025-06-03 03:12:42] 2025-06-03 07:12:22,970 | INFO     | -- intersect: 82787831051.20647
[2025-06-03 03:12:42] 2025-06-03 07:12:22,970 | INFO     | current memory leak: -47.33 B/s (using 70 data points, chi2=0.02)
[2025-06-03 03:12:42] 2025-06-03 07:12:22,970 | INFO     | ..............................
[2025-06-03 03:12:42] 2025-06-03 07:12:22,970 | INFO     | . Timing measurements:
[2025-06-03 03:12:42] 2025-06-03 07:12:22,970 | INFO     | . get job = 0 s
[2025-06-03 03:12:42] 2025-06-03 07:12:22,970 | INFO     | . initial setup = 2 s
[2025-06-03 03:12:42] 2025-06-03 07:12:22,970 | INFO     | . payload setup = 5 s
[2025-06-03 03:12:42] 2025-06-03 07:12:22,970 | INFO     | . stage-in = 0 s
[2025-06-03 03:12:42] 2025-06-03 07:12:22,970 | INFO     | . payload execution = 6421 s
[2025-06-03 03:12:42] 2025-06-03 07:12:22,970 | INFO     | . stage-out = 0 s
[2025-06-03 03:12:42] 2025-06-03 07:12:22,970 | INFO     | . log creation = 0 s
[2025-06-03 03:12:42] 2025-06-03 07:12:22,970 | INFO     | ..............................
[2025-06-03 03:12:42] 2025-06-03 07:12:23,018 | INFO     | 
[2025-06-03 03:12:42] 2025-06-03 07:12:23,018 | INFO     | job summary report
[2025-06-03 03:12:42] 2025-06-03 07:12:23,018 | INFO     | --------------------------------------------------
[2025-06-03 03:12:42] 2025-06-03 07:12:23,018 | INFO     | PanDA job id: 6669443549
[2025-06-03 03:12:42] 2025-06-03 07:12:23,018 | INFO     | task id: 44871837
[2025-06-03 03:12:42] 2025-06-03 07:12:23,018 | INFO     | errors: (none)
[2025-06-03 03:12:42] 2025-06-03 07:12:23,018 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 03:12:42] 2025-06-03 07:12:23,019 | INFO     | pilot state: finished 
[2025-06-03 03:12:42] 2025-06-03 07:12:23,019 | INFO     | transexitcode: 0
[2025-06-03 03:12:42] 2025-06-03 07:12:23,019 | INFO     | exeerrorcode: 0
[2025-06-03 03:12:42] 2025-06-03 07:12:23,019 | INFO     | exeerrordiag: 
[2025-06-03 03:12:42] 2025-06-03 07:12:23,019 | INFO     | exitcode: 0
[2025-06-03 03:12:42] 2025-06-03 07:12:23,019 | INFO     | exitmsg: OK
[2025-06-03 03:12:42] 2025-06-03 07:12:23,019 | INFO     | cpuconsumptiontime: 44270 s
[2025-06-03 03:12:42] 2025-06-03 07:12:23,019 | INFO     | nevents: 400
[2025-06-03 03:12:42] 2025-06-03 07:12:23,019 | INFO     | neventsw: 0
[2025-06-03 03:12:42] 2025-06-03 07:12:23,019 | INFO     | pid: 2866587
[2025-06-03 03:12:42] 2025-06-03 07:12:23,019 | INFO     | pgrp: 2866587
[2025-06-03 03:12:42] 2025-06-03 07:12:23,019 | INFO     | corecount: 8
[2025-06-03 03:12:42] 2025-06-03 07:12:23,019 | INFO     | event service: False
[2025-06-03 03:12:42] 2025-06-03 07:12:23,019 | INFO     | sizes: {0: 2405183, 1: 2405183, 4: 2405417, 11: 2405445, 6431: 2432407, 6432: 2441348, 6434: 2441532, 6438: 2441702}
[2025-06-03 03:12:42] 2025-06-03 07:12:23,019 | INFO     | --------------------------------------------------
[2025-06-03 03:12:42] 2025-06-03 07:12:23,020 | INFO     | 
[2025-06-03 03:12:42] 2025-06-03 07:12:23,020 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-03 03:12:42] 2025-06-03 07:12:23,036 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 03:12:42] 2025-06-03 07:12:23,036 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 03:12:42] 2025-06-03 07:12:23,036 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 03:12:42] 2025-06-03 07:12:23,036 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 03:12:42] 2025-06-03 07:12:23,037 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 03:12:42] 2025-06-03 07:12:23,037 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 03:12:42] 2025-06-03 07:12:23,037 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 03:12:42] 2025-06-03 07:12:23,037 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 03:12:42] 2025-06-03 07:12:23,037 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 03:12:42] 2025-06-03 07:12:23,037 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 03:12:42] 2025-06-03 07:12:23,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 03:12:42] 2025-06-03 07:12:23,037 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 03:12:42] 2025-06-03 07:12:23,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 03:12:42] 2025-06-03 07:12:23,037 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 03:12:42] 2025-06-03 07:12:23,037 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 03:12:42] 2025-06-03 07:12:23,037 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 03:12:42] 2025-06-03 07:12:23,037 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 03:12:42] 2025-06-03 07:12:23,038 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 03:12:42] 2025-06-03 07:12:23,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 03:12:42] 2025-06-03 07:12:23,038 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 03:12:42] 2025-06-03 07:12:23,038 | INFO     | job 6669443549 has completed (purged errors)
[2025-06-03 03:12:42] 2025-06-03 07:12:23,038 | INFO     | overall cleanup function is called
[2025-06-03 03:12:42] 2025-06-03 07:12:23,452 | INFO     | PID=2859899 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 03:12:42] 2025-06-03 07:12:23,452 | INFO     | .. there are 8 such processes running
[2025-06-03 03:12:42] 2025-06-03 07:12:24,046 | INFO     | --- collectZombieJob: --- 10, [2866587]
[2025-06-03 03:12:42] 2025-06-03 07:12:24,046 | INFO     | zombie collector waiting for pid 2866587
[2025-06-03 03:12:42] 2025-06-03 07:12:24,046 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 03:12:42] 2025-06-03 07:12:24,046 | INFO     | collected zombie processes
[2025-06-03 03:12:42] 2025-06-03 07:12:24,046 | INFO     | will attempt to kill all subprocesses of pid=2866587
[2025-06-03 03:12:42] 2025-06-03 07:12:24,273 | INFO     | process IDs to be killed: [2866587] (in reverse order)
[2025-06-03 03:12:42] 2025-06-03 07:12:24,344 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 03:12:42] 2025-06-03 07:12:24,344 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 03:12:42] 2025-06-03 07:12:24,352 | INFO     | did not find any defunct processes belonging to 2866587
[2025-06-03 03:12:42] 2025-06-03 07:12:24,359 | INFO     | did not find any defunct processes belonging to 2866587
[2025-06-03 03:12:42] 2025-06-03 07:12:24,360 | INFO     | ready for new job
[2025-06-03 03:12:42] 2025-06-03 07:12:24,360 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 03:12:42] 2025-06-03 07:12:24,362 | INFO     | **************************************
[2025-06-03 03:12:42] 2025-06-03 07:12:24,362 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 03:12:42] 2025-06-03 07:12:24,362 | INFO     | **************************************
[2025-06-03 03:12:42] 2025-06-03 07:12:24,362 | INFO     | 
[2025-06-03 03:12:42] 2025-06-03 07:12:24,377 | INFO     | architecture information:
[2025-06-03 03:12:42] 2025-06-03 07:12:24,378 | INFO     | executing command: cat /etc/os-release
[2025-06-03 03:12:42] 2025-06-03 07:12:24,390 | INFO     | cat /etc/os-release:
[2025-06-03 03:12:42] NAME="CentOS Linux"
[2025-06-03 03:12:42] VERSION="7 (Core)"
[2025-06-03 03:12:42] ID="centos"
[2025-06-03 03:12:42] ID_LIKE="rhel fedora"
[2025-06-03 03:12:42] VERSION_ID="7"
[2025-06-03 03:12:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 03:12:42] ANSI_COLOR="0;31"
[2025-06-03 03:12:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 03:12:42] HOME_URL="https://www.centos.org/"
[2025-06-03 03:12:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 03:12:42] 
[2025-06-03 03:12:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 03:12:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 03:12:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 03:12:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 03:12:42] 
[2025-06-03 03:12:42] 2025-06-03 07:12:24,390 | INFO     | **************************************
[2025-06-03 03:12:42] 2025-06-03 07:12:24,893 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-03 03:12:42] 2025-06-03 07:12:24,907 | INFO     | sufficient remaining disk space (55513710592 B)
[2025-06-03 03:12:42] 2025-06-03 07:12:24,907 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 03:12:42] 2025-06-03 07:12:24,908 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 03:12:42] 2025-06-03 07:12:24,908 | INFO     | update_server=False
[2025-06-03 03:12:42] 2025-06-03 07:12:24,908 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 03:12:42] 2025-06-03 07:12:24,908 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 03:12:42] 2025-06-03 07:12:24,908 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:12:42] 2025-06-03 07:12:24,909 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 03:12:42] 2025-06-03 07:12:24,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:12:42] 2025-06-03 07:12:24,909 | INFO     | aborting loop
[2025-06-03 03:12:42] 2025-06-03 07:12:24,986 | INFO     | all job control threads have been joined
[2025-06-03 03:12:42] 2025-06-03 07:12:25,458 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 03:12:42] 2025-06-03 07:12:25,458 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 03:12:42] 2025-06-03 07:12:25,458 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 03:12:42] 2025-06-03 07:12:25,801 | INFO     | all payload control threads have been joined
[2025-06-03 03:12:42] 2025-06-03 07:12:25,913 | INFO     | [job] retrieve thread has finished
[2025-06-03 03:12:42] 2025-06-03 07:12:25,914 | INFO     | [job] queue monitor thread has finished
[2025-06-03 03:12:42] 2025-06-03 07:12:25,915 | INFO     | [job] job monitor thread has finished
[2025-06-03 03:12:42] 2025-06-03 07:12:25,991 | INFO     | [job] control thread has finished
[2025-06-03 03:12:42] 2025-06-03 07:12:25,994 | INFO     | all data control threads have been joined
[2025-06-03 03:12:42] 2025-06-03 07:12:26,340 | INFO     | [job] validate thread has finished
[2025-06-03 03:12:42] 2025-06-03 07:12:26,381 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 03:12:42] 2025-06-03 07:12:26,397 | INFO     | [payload] validate_post thread has finished
[2025-06-03 03:12:42] 2025-06-03 07:12:26,563 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 03:12:42] 2025-06-03 07:12:26,803 | INFO     | [payload] control thread has finished
[2025-06-03 03:12:42] 2025-06-03 07:12:26,915 | INFO     | [data] copytool_out thread has finished
[2025-06-03 03:12:42] 2025-06-03 07:12:27,000 | INFO     | [data] control thread has finished
[2025-06-03 03:12:42] 2025-06-03 07:12:27,164 | INFO     | [payload] failed_post thread has finished
[2025-06-03 03:12:42] 2025-06-03 07:12:27,225 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 03:12:42] 2025-06-03 07:12:27,340 | INFO     | [data] copytool_in thread has finished
[2025-06-03 03:12:42] 2025-06-03 07:12:28,915 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 03:12:42] 2025-06-03 07:12:35,209 | INFO     | job.realtimelogging is not enabled
[2025-06-03 03:12:42] 2025-06-03 07:12:36,215 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 03:12:42] 2025-06-03 07:12:37,122 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140122822858560)>', '<ExcThread(monitor, started 140122326542080)>']
[2025-06-03 03:12:42] 2025-06-03 07:12:37,517 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 03:12:42] 2025-06-03 07:12:37,517 | INFO     | [monitor] control thread has ended
[2025-06-03 03:12:42] 2025-06-03 07:12:42,132 | INFO     | all workflow threads have been joined
[2025-06-03 03:12:42] 2025-06-03 07:12:42,132 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 03:12:42] 2025-06-03 07:12:42,132 | INFO     | traces error code: 0
[2025-06-03 03:12:42] 2025-06-03 07:12:42,133 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 03:12:42] 2025-06-03 07:12:42,263 [wrapper] ==== pilot stdout END ====
[2025-06-03 03:12:42] 2025-06-03 07:12:42,266 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 03:12:42] 2025-06-03 07:12:42,269 [wrapper] pilotpid: 2859899
[2025-06-03 03:12:42] 2025-06-03 07:12:42,271 [wrapper] Pilot exit status: 0
[2025-06-03 03:12:42] 2025-06-03 07:12:42,280 [wrapper] pandaids: 6669443549
[2025-06-03 03:12:42] 2025-06-03 07:12:42,327 [wrapper] cleanup supervisor_pilot 3172227 2859900
[2025-06-03 03:12:42] 2025-06-03 07:12:42,330 [wrapper] Test setup, not cleaning
[2025-06-03 03:12:42] 2025-06-03 07:12:42,332 [wrapper] apfmon messages muted
[2025-06-03 03:12:42] 2025-06-03 07:12:42,335 [wrapper] ==== wrapper stdout END ====
[2025-06-03 03:12:42] 2025-06-03 07:12:42,337 [wrapper] ==== wrapper stderr END ====
[2025-06-03 03:12:42]  *** Error codes and diagnostics ***
[2025-06-03 03:12:42]     "exeErrorCode": 0,
[2025-06-03 03:12:42]     "exeErrorDiag": "",
[2025-06-03 03:12:42]     "pilotErrorCode": 0,
[2025-06-03 03:12:42]     "pilotErrorDiag": "",
[2025-06-03 03:12:42]  *** Listing of results directory ***
[2025-06-03 03:12:42] total 422896
[2025-06-03 03:12:42] -rw-r--r--. 1 boincer umatlas    495897 May 29 02:19 pilot3.tar.gz
[2025-06-03 03:12:42] -rw-r--r--. 1 boincer umatlas      5111 May 29 02:31 queuedata.json
[2025-06-03 03:12:42] -rwx------. 1 boincer umatlas     37140 May 29 02:33 runpilot2-wrapper.sh
[2025-06-03 03:12:42] -rw-r--r--. 1 boincer umatlas       100 Jun  3 01:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 03:12:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 01:24 run_atlas
[2025-06-03 03:12:42] -rw-r--r--. 1 boincer umatlas       105 Jun  3 01:24 job.xml
[2025-06-03 03:12:42] -rw-r--r--. 2 boincer umatlas 226561679 Jun  3 01:24 EVNT.44871834._003800.pool.root.1
[2025-06-03 03:12:42] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 01:24 start_atlas.sh
[2025-06-03 03:12:42] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 01:24 shared
[2025-06-03 03:12:42] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 01:24 input.tar.gz
[2025-06-03 03:12:42] -rw-r--r--. 1 boincer umatlas         0 Jun  3 01:24 boinc_lockfile
[2025-06-03 03:12:42] -rw-r--r--. 1 boincer umatlas      2558 Jun  3 01:24 pandaJob.out
[2025-06-03 03:12:42] -rw-------. 1 boincer umatlas    986901 Jun  3 01:24 agis_schedconf.cvmfs.json
[2025-06-03 03:12:42] -rw-------. 1 boincer umatlas   1603667 Jun  3 01:24 agis_ddmendpoints.agis.ALL.json
[2025-06-03 03:12:42] drwx------. 4 boincer umatlas      4096 Jun  3 01:24 pilot3
[2025-06-03 03:12:42] -rw-------. 1 boincer umatlas        95 Jun  3 03:11 pilot_heartbeat.json
[2025-06-03 03:12:42] -rw-------. 1 boincer umatlas 200747281 Jun  3 03:11 HITS.44871837._096427.pool.root.1
[2025-06-03 03:12:42] -rw-r--r--. 1 boincer umatlas       529 Jun  3 03:11 boinc_task_state.xml
[2025-06-03 03:12:42] -rw-------. 1 boincer umatlas      1032 Jun  3 03:12 memory_monitor_summary.json
[2025-06-03 03:12:42] -rw-------. 1 boincer umatlas    329832 Jun  3 03:12 log.44871837._096427.job.log.tgz.1
[2025-06-03 03:12:42] -rw-------. 1 boincer umatlas      7713 Jun  3 03:12 heartbeat.json
[2025-06-03 03:12:42] -rw-r--r--. 1 boincer umatlas      6843 Jun  3 03:12 init_data.xml
[2025-06-03 03:12:42] -rw-r--r--. 1 boincer umatlas        27 Jun  3 03:12 wrapper_checkpoint.txt
[2025-06-03 03:12:42] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 03:12 boinc_mmap_file
[2025-06-03 03:12:42] -rw-------. 1 boincer umatlas      4425 Jun  3 03:12 pilotlog.txt
[2025-06-03 03:12:42] -rw-------. 1 boincer umatlas    621828 Jun  3 03:12 log.44871837._096427.job.log.1
[2025-06-03 03:12:42] -rw-------. 1 boincer umatlas       357 Jun  3 03:12 output.list
[2025-06-03 03:12:42] -rw-r--r--. 1 boincer umatlas       620 Jun  3 03:12 runtime_log
[2025-06-03 03:12:42] -rw-------. 1 boincer umatlas    972800 Jun  3 03:12 result.tar.gz
[2025-06-03 03:12:42] -rw-r--r--. 1 boincer umatlas      8664 Jun  3 03:12 runtime_log.err
[2025-06-03 03:12:42] -rw-------. 1 boincer umatlas       652 Jun  3 03:12 1TiKDmp0le7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmH1dKDm5QeVcm.diag
[2025-06-03 03:12:42] -rw-r--r--. 1 boincer umatlas     20866 Jun  3 03:12 stderr.txt
[2025-06-03 03:12:42] HITS file was successfully produced:
[2025-06-03 03:12:42] -rw-------. 1 boincer umatlas 200747281 Jun  3 03:11 shared/HITS.pool.root.1
[2025-06-03 03:12:42]  *** Contents of shared directory: ***
[2025-06-03 03:12:42] total 418768
[2025-06-03 03:12:42] -rw-r--r--. 2 boincer umatlas 226561679 Jun  3 01:24 ATLAS.root_0
[2025-06-03 03:12:42] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 01:24 start_atlas.sh
[2025-06-03 03:12:42] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 01:24 input.tar.gz
[2025-06-03 03:12:42] -rw-------. 1 boincer umatlas 200747281 Jun  3 03:11 HITS.pool.root.1
[2025-06-03 03:12:42] -rw-------. 1 boincer umatlas    972800 Jun  3 03:12 result.tar.gz
03:12:44 (2856291): run_atlas exited; CPU time 44417.134429
03:12:44 (2856291): called boinc_finish(0)

</stderr_txt>
]]>

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