Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
14:46:10 (1268088): wrapper (7.7.26015): starting
14:46:10 (1268088): wrapper: running run_atlas (--nthreads 2)
[2025-06-03 14:46:10] Arguments: --nthreads 2
[2025-06-03 14:46:10] Threads: 2
[2025-06-03 14:46:10] Checking for CVMFS
[2025-06-03 14:46:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:46:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:46:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:46:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:46:11] 2.9.2.0 997565 1137 59572 146741 0 56 30230281 36864000 0 130560 0 695389 99.989 293939 58472 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-03 14:46:11] CVMFS is ok
[2025-06-03 14:46:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 14:46:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 14:46:11] Further information can be found at the LHC@home message board.
[2025-06-03 14:46:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:46:11] Checking for apptainer binary...
[2025-06-03 14:46:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:46:11] Running /usr/bin/apptainer --version
[2025-06-03 14:46:11] apptainer version 1.3.6-6.1
[2025-06-03 14:46:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:46:11] thA371
[2025-06-03 14:46:11] apptainer works
[2025-06-03 14:46:11] Set ATHENA_PROC_NUMBER=2
[2025-06-03 14:46:11] Set ATHENA_CORE_NUMBER=2
[2025-06-03 14:46:11] Starting ATLAS job with PandaID=6677442351
[2025-06-03 14:46:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:03:21]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:03:21] 2025-06-03 15:02:58,736 | INFO     | monitor loop #630: job 0:6677442351 is in state 'finished'
[2025-06-03 17:03:21] 2025-06-03 15:02:58,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:03:21] 2025-06-03 15:02:59,182 | INFO     | 8203s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 17:03:21] 2025-06-03 15:03:00,283 | INFO     | PID=1271709 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 17:03:21] 2025-06-03 15:03:01,240 | INFO     | monitor loop #631: job 0:6677442351 is in state 'finished'
[2025-06-03 17:03:21] 2025-06-03 15:03:01,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:03:21] 2025-06-03 15:03:02,539 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 17:03:21] 2025-06-03 15:03:02,539 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677442351/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 17:03:21] 2025-06-03 15:03:02,540 | INFO     | extracted standard info from prmon json
[2025-06-03 17:03:21] 2025-06-03 15:03:02,540 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:03:21] 2025-06-03 15:03:02,540 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:03:21] 2025-06-03 15:03:02,540 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:03:21] 2025-06-03 15:03:02,540 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:03:21] 2025-06-03 15:03:02,541 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:03:21] 2025-06-03 15:03:02,541 | INFO     | sum of square deviations: 746051197.5
[2025-06-03 17:03:21] 2025-06-03 15:03:02,541 | INFO     | sum of deviations: -19229558900.5
[2025-06-03 17:03:21] 2025-06-03 15:03:02,541 | INFO     | mean x: 1748958854.5
[2025-06-03 17:03:21] 2025-06-03 15:03:02,541 | INFO     | mean y: 2373831.052238806
[2025-06-03 17:03:21] 2025-06-03 15:03:02,541 | INFO     | -- intersect: 45081997615.395485
[2025-06-03 17:03:21] 2025-06-03 15:03:02,541 | INFO     | intersect: 45081997615.395485
[2025-06-03 17:03:21] 2025-06-03 15:03:02,542 | INFO     | chi2: 1.8043806570422054
[2025-06-03 17:03:21] 2025-06-03 15:03:02,542 | INFO     | sum of square deviations: 665612480.0
[2025-06-03 17:03:21] 2025-06-03 15:03:02,542 | INFO     | sum of deviations: -18146779956.0
[2025-06-03 17:03:21] 2025-06-03 15:03:02,542 | INFO     | mean x: 1748958702.0
[2025-06-03 17:03:21] 2025-06-03 15:03:02,542 | INFO     | mean y: 2375884.7751937984
[2025-06-03 17:03:21] 2025-06-03 15:03:02,542 | INFO     | -- intersect: 47684728110.691055
[2025-06-03 17:03:21] 2025-06-03 15:03:02,542 | INFO     | intersect: 47684728110.691055
[2025-06-03 17:03:21] 2025-06-03 15:03:02,542 | INFO     | chi2: 1.7969923254112234
[2025-06-03 17:03:21] 2025-06-03 15:03:02,542 | INFO     | current chi2=1.7969923254112234 (change=0.4094663508027808 %)
[2025-06-03 17:03:21] 2025-06-03 15:03:02,542 | INFO     | right removable region: 128
[2025-06-03 17:03:21] 2025-06-03 15:03:02,542 | INFO     | sum of square deviations: 665612480.0
[2025-06-03 17:03:21] 2025-06-03 15:03:02,543 | INFO     | sum of deviations: -35892260981.00001
[2025-06-03 17:03:21] 2025-06-03 15:03:02,543 | INFO     | mean x: 1748959007.0
[2025-06-03 17:03:21] 2025-06-03 15:03:02,543 | INFO     | mean y: 2404705.108527132
[2025-06-03 17:03:21] 2025-06-03 15:03:02,543 | INFO     | -- intersect: 94312675336.32419
[2025-06-03 17:03:21] 2025-06-03 15:03:02,543 | INFO     | intersect: 94312675336.32419
[2025-06-03 17:03:21] 2025-06-03 15:03:02,543 | INFO     | chi2: 0.3133926644777665
[2025-06-03 17:03:21] 2025-06-03 15:03:02,543 | INFO     | current chi2=0.3133926644777665 (change=82.63156594731574 %)
[2025-06-03 17:03:21] 2025-06-03 15:03:02,543 | INFO     | sum of square deviations: 591173875.0
[2025-06-03 17:03:21] 2025-06-03 15:03:02,543 | INFO     | sum of deviations: -30802050009.5
[2025-06-03 17:03:21] 2025-06-03 15:03:02,543 | INFO     | mean x: 1748959159.5
[2025-06-03 17:03:21] 2025-06-03 15:03:02,543 | INFO     | mean y: 2394266.943548387
[2025-06-03 17:03:21] 2025-06-03 15:03:02,543 | INFO     | -- intersect: 91128761269.3624
[2025-06-03 17:03:21] 2025-06-03 15:03:02,543 | INFO     | intersect: 91128761269.3624
[2025-06-03 17:03:21] 2025-06-03 15:03:02,543 | INFO     | chi2: 0.3103942079495367
[2025-06-03 17:03:21] 2025-06-03 15:03:02,543 | INFO     | current chi2=0.3103942079495367 (change=0.9567730416493204 %)
[2025-06-03 17:03:21] 2025-06-03 15:03:02,543 | INFO     | left removable region: 20
[2025-06-03 17:03:21] 2025-06-03 15:03:02,544 | INFO     | sum of square deviations: 390582207.0
[2025-06-03 17:03:21] 2025-06-03 15:03:02,544 | INFO     | sum of deviations: -18909514745.000008
[2025-06-03 17:03:21] 2025-06-03 15:03:02,544 | INFO     | mean x: 1748959281.5
[2025-06-03 17:03:21] 2025-06-03 15:03:02,544 | INFO     | mean y: 2371666.5555555555
[2025-06-03 17:03:21] 2025-06-03 15:03:02,544 | INFO     | -- intersect: 84675894241.86548
[2025-06-03 17:03:21] 2025-06-03 15:03:02,544 | INFO     | intersect: 84675894241.86548
[2025-06-03 17:03:21] 2025-06-03 15:03:02,544 | INFO     | chi2: 0.27435180566074635
[2025-06-03 17:03:21] 2025-06-03 15:03:02,544 | INFO     | -- intersect: 84675894241.86548
[2025-06-03 17:03:21] 2025-06-03 15:03:02,544 | INFO     | current memory leak: -48.41 B/s (using 108 data points, chi2=0.27)
[2025-06-03 17:03:21] 2025-06-03 15:03:02,544 | INFO     | ..............................
[2025-06-03 17:03:21] 2025-06-03 15:03:02,544 | INFO     | . Timing measurements:
[2025-06-03 17:03:21] 2025-06-03 15:03:02,544 | INFO     | . get job = 0 s
[2025-06-03 17:03:21] 2025-06-03 15:03:02,544 | INFO     | . initial setup = 1 s
[2025-06-03 17:03:21] 2025-06-03 15:03:02,544 | INFO     | . payload setup = 3 s
[2025-06-03 17:03:21] 2025-06-03 15:03:02,544 | INFO     | . stage-in = 0 s
[2025-06-03 17:03:21] 2025-06-03 15:03:02,544 | INFO     | . payload execution = 8173 s
[2025-06-03 17:03:21] 2025-06-03 15:03:02,544 | INFO     | . stage-out = 0 s
[2025-06-03 17:03:21] 2025-06-03 15:03:02,545 | INFO     | . log creation = 0 s
[2025-06-03 17:03:21] 2025-06-03 15:03:02,545 | INFO     | ..............................
[2025-06-03 17:03:21] 2025-06-03 15:03:03,044 | INFO     | 
[2025-06-03 17:03:21] 2025-06-03 15:03:03,044 | INFO     | job summary report
[2025-06-03 17:03:21] 2025-06-03 15:03:03,044 | INFO     | --------------------------------------------------
[2025-06-03 17:03:21] 2025-06-03 15:03:03,044 | INFO     | PanDA job id: 6677442351
[2025-06-03 17:03:21] 2025-06-03 15:03:03,044 | INFO     | task id: 45006595
[2025-06-03 17:03:21] 2025-06-03 15:03:03,044 | INFO     | errors: (none)
[2025-06-03 17:03:21] 2025-06-03 15:03:03,045 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:03:21] 2025-06-03 15:03:03,045 | INFO     | pilot state: finished 
[2025-06-03 17:03:21] 2025-06-03 15:03:03,045 | INFO     | transexitcode: 0
[2025-06-03 17:03:21] 2025-06-03 15:03:03,045 | INFO     | exeerrorcode: 0
[2025-06-03 17:03:21] 2025-06-03 15:03:03,045 | INFO     | exeerrordiag: 
[2025-06-03 17:03:21] 2025-06-03 15:03:03,045 | INFO     | exitcode: 0
[2025-06-03 17:03:21] 2025-06-03 15:03:03,045 | INFO     | exitmsg: OK
[2025-06-03 17:03:21] 2025-06-03 15:03:03,045 | INFO     | cpuconsumptiontime: 15981 s
[2025-06-03 17:03:21] 2025-06-03 15:03:03,045 | INFO     | nevents: 400
[2025-06-03 17:03:21] 2025-06-03 15:03:03,045 | INFO     | neventsw: 0
[2025-06-03 17:03:21] 2025-06-03 15:03:03,046 | INFO     | pid: 1278171
[2025-06-03 17:03:21] 2025-06-03 15:03:03,046 | INFO     | pgrp: 1278171
[2025-06-03 17:03:21] 2025-06-03 15:03:03,046 | INFO     | corecount: 2
[2025-06-03 17:03:21] 2025-06-03 15:03:03,046 | INFO     | event service: False
[2025-06-03 17:03:21] 2025-06-03 15:03:03,046 | INFO     | sizes: {0: 2405183, 3: 2405389, 11: 2405417, 8180: 2433139, 8181: 2442141, 8183: 2442141, 8192: 2442439}
[2025-06-03 17:03:21] 2025-06-03 15:03:03,046 | INFO     | --------------------------------------------------
[2025-06-03 17:03:21] 2025-06-03 15:03:03,046 | INFO     | 
[2025-06-03 17:03:21] 2025-06-03 15:03:03,046 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-03 17:03:21] 2025-06-03 15:03:03,060 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 15:03:03,061 | INFO     | job 6677442351 has completed (purged errors)
[2025-06-03 17:03:21] 2025-06-03 15:03:03,062 | INFO     | overall cleanup function is called
[2025-06-03 17:03:21] 2025-06-03 15:03:04,064 | INFO     | --- collectZombieJob: --- 10, [1278171]
[2025-06-03 17:03:21] 2025-06-03 15:03:04,065 | INFO     | zombie collector waiting for pid 1278171
[2025-06-03 17:03:21] 2025-06-03 15:03:04,065 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:03:21] 2025-06-03 15:03:04,065 | INFO     | collected zombie processes
[2025-06-03 17:03:21] 2025-06-03 15:03:04,065 | INFO     | will attempt to kill all subprocesses of pid=1278171
[2025-06-03 17:03:21] 2025-06-03 15:03:04,114 | INFO     | process IDs to be killed: [1278171] (in reverse order)
[2025-06-03 17:03:21] 2025-06-03 15:03:04,141 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:03:21] 2025-06-03 15:03:04,142 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:03:21] 2025-06-03 15:03:04,143 | INFO     | did not find any defunct processes belonging to 1278171
[2025-06-03 17:03:21] 2025-06-03 15:03:04,144 | INFO     | did not find any defunct processes belonging to 1278171
[2025-06-03 17:03:21] 2025-06-03 15:03:04,144 | INFO     | ready for new job
[2025-06-03 17:03:21] 2025-06-03 15:03:04,144 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:03:21] 2025-06-03 15:03:04,145 | INFO     | **************************************
[2025-06-03 17:03:21] 2025-06-03 15:03:04,145 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:03:21] 2025-06-03 15:03:04,145 | INFO     | **************************************
[2025-06-03 17:03:21] 2025-06-03 15:03:04,145 | INFO     | 
[2025-06-03 17:03:21] 2025-06-03 15:03:04,145 | INFO     | architecture information:
[2025-06-03 17:03:21] 2025-06-03 15:03:04,146 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:03:21] 2025-06-03 15:03:04,155 | INFO     | cat /etc/os-release:
[2025-06-03 17:03:21] NAME="CentOS Linux"
[2025-06-03 17:03:21] VERSION="7 (Core)"
[2025-06-03 17:03:21] ID="centos"
[2025-06-03 17:03:21] ID_LIKE="rhel fedora"
[2025-06-03 17:03:21] VERSION_ID="7"
[2025-06-03 17:03:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:03:21] ANSI_COLOR="0;31"
[2025-06-03 17:03:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:03:21] HOME_URL="https://www.centos.org/"
[2025-06-03 17:03:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:03:21] 
[2025-06-03 17:03:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:03:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:03:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:03:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:03:21] 
[2025-06-03 17:03:21] 2025-06-03 15:03:04,155 | INFO     | **************************************
[2025-06-03 17:03:21] 2025-06-03 15:03:04,659 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-03 17:03:21] 2025-06-03 15:03:04,672 | INFO     | sufficient remaining disk space (225789870080 B)
[2025-06-03 17:03:21] 2025-06-03 15:03:04,672 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:03:21] 2025-06-03 15:03:04,672 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:03:21] 2025-06-03 15:03:04,672 | INFO     | update_server=False
[2025-06-03 17:03:21] 2025-06-03 15:03:04,672 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:03:21] 2025-06-03 15:03:04,672 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:03:21] 2025-06-03 15:03:04,672 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 17:03:21] 2025-06-03 15:03:04,673 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:03:21] 2025-06-03 15:03:04,673 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:03:21] 2025-06-03 15:03:04,673 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:03:21] 2025-06-03 15:03:04,673 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:03:21] 2025-06-03 15:03:04,745 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:03:21] 2025-06-03 15:03:04,746 | INFO     | aborting loop
[2025-06-03 17:03:21] 2025-06-03 15:03:04,871 | INFO     | all payload control threads have been joined
[2025-06-03 17:03:21] 2025-06-03 15:03:05,492 | INFO     | all data control threads have been joined
[2025-06-03 17:03:21] 2025-06-03 15:03:05,678 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:03:21] 2025-06-03 15:03:05,751 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:03:21] 2025-06-03 15:03:05,877 | INFO     | [payload] control thread has finished
[2025-06-03 17:03:21] 2025-06-03 15:03:05,919 | INFO     | all job control threads have been joined
[2025-06-03 17:03:21] 2025-06-03 15:03:06,040 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:03:21] 2025-06-03 15:03:06,498 | INFO     | [data] control thread has finished
[2025-06-03 17:03:21] 2025-06-03 15:03:06,580 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:03:21] 2025-06-03 15:03:06,678 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:03:21] 2025-06-03 15:03:06,842 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:03:21] 2025-06-03 15:03:06,925 | INFO     | [job] control thread has finished
[2025-06-03 17:03:21] 2025-06-03 15:03:06,959 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:03:21] 2025-06-03 15:03:07,065 | INFO     | [job] validate thread has finished
[2025-06-03 17:03:21] 2025-06-03 15:03:07,106 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:03:21] 2025-06-03 15:03:07,117 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:03:21] 2025-06-03 15:03:07,581 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:03:21] 2025-06-03 15:03:08,587 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:03:21] 2025-06-03 15:03:08,679 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:03:21] 2025-06-03 15:03:14,991 | INFO     | job.realtimelogging is not enabled
[2025-06-03 17:03:21] 2025-06-03 15:03:15,997 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:03:21] 2025-06-03 15:03:16,507 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140444360169280)>', '<ExcThread(monitor, started 140443870287616)>']
[2025-06-03 17:03:21] 2025-06-03 15:03:16,729 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:03:21] 2025-06-03 15:03:16,729 | INFO     | [monitor] control thread has ended
[2025-06-03 17:03:21] 2025-06-03 15:03:21,531 | INFO     | all workflow threads have been joined
[2025-06-03 17:03:21] 2025-06-03 15:03:21,531 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:03:21] 2025-06-03 15:03:21,532 | INFO     | traces error code: 0
[2025-06-03 17:03:21] 2025-06-03 15:03:21,532 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:03:21] 2025-06-03 15:03:21,585 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:03:21] 2025-06-03 15:03:21,589 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:03:21] 2025-06-03 15:03:21,591 [wrapper] pilotpid: 1271709
[2025-06-03 17:03:21] 2025-06-03 15:03:21,594 [wrapper] Pilot exit status: 0
[2025-06-03 17:03:21] 2025-06-03 15:03:21,602 [wrapper] pandaids: 6677442351
[2025-06-03 17:03:21] 2025-06-03 15:03:21,620 [wrapper] cleanup supervisor_pilot 1299466 1271710
[2025-06-03 17:03:21] 2025-06-03 15:03:21,623 [wrapper] Test setup, not cleaning
[2025-06-03 17:03:21] 2025-06-03 15:03:21,626 [wrapper] apfmon messages muted
[2025-06-03 17:03:21] 2025-06-03 15:03:21,629 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:03:21] 2025-06-03 15:03:21,631 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:03:21]  *** Error codes and diagnostics ***
[2025-06-03 17:03:21]     "exeErrorCode": 0,
[2025-06-03 17:03:21]     "exeErrorDiag": "",
[2025-06-03 17:03:21]     "pilotErrorCode": 0,
[2025-06-03 17:03:21]     "pilotErrorDiag": "",
[2025-06-03 17:03:21]  *** Listing of results directory ***
[2025-06-03 17:03:21] total 393188
[2025-06-03 17:03:21] -rw-r--r-- 1 boinc boinc    495897 Jun  3 03:24 pilot3.tar.gz
[2025-06-03 17:03:21] -rw-r--r-- 1 boinc boinc      5111 Jun  3 03:37 queuedata.json
[2025-06-03 17:03:21] -rwx------ 1 boinc boinc     37140 Jun  3 03:38 runpilot2-wrapper.sh
[2025-06-03 17:03:21] -rw-r--r-- 1 boinc boinc       100 Jun  3 14:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:03:21] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 14:46 run_atlas
[2025-06-03 17:03:21] -rw-r--r-- 1 boinc boinc       105 Jun  3 14:46 job.xml
[2025-06-03 17:03:21] -rw-r--r-- 2 boinc boinc 216675217 Jun  3 14:46 EVNT.45006593._000657.pool.root.1
[2025-06-03 17:03:21] -rw-r--r-- 1 boinc boinc      6675 Jun  3 14:46 init_data.xml
[2025-06-03 17:03:21] drwxrwx--x 2 boinc boinc      4096 Jun  3 14:46 shared
[2025-06-03 17:03:21] -rw-r--r-- 2 boinc boinc    508882 Jun  3 14:46 input.tar.gz
[2025-06-03 17:03:21] -rw-r--r-- 2 boinc boinc     15093 Jun  3 14:46 start_atlas.sh
[2025-06-03 17:03:21] -rw-r--r-- 1 boinc boinc         0 Jun  3 14:46 boinc_lockfile
[2025-06-03 17:03:21] -rw-r--r-- 1 boinc boinc      2523 Jun  3 14:46 pandaJob.out
[2025-06-03 17:03:21] -rw------- 1 boinc boinc    982666 Jun  3 14:46 agis_schedconf.cvmfs.json
[2025-06-03 17:03:21] -rw------- 1 boinc boinc   1603667 Jun  3 14:46 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:03:21] drwx------ 4 boinc boinc      4096 Jun  3 14:46 pilot3
[2025-06-03 17:03:21] -rw------- 1 boinc boinc 180114975 Jun  3 17:02 HITS.45006595._016406.pool.root.1
[2025-06-03 17:03:21] -rw-r--r-- 1 boinc boinc       529 Jun  3 17:02 boinc_task_state.xml
[2025-06-03 17:03:21] -rw------- 1 boinc boinc      1017 Jun  3 17:02 memory_monitor_summary.json
[2025-06-03 17:03:21] -rw------- 1 boinc boinc    233830 Jun  3 17:02 log.45006595._016406.job.log.tgz.1
[2025-06-03 17:03:21] -rw------- 1 boinc boinc        95 Jun  3 17:02 pilot_heartbeat.json
[2025-06-03 17:03:21] -rw------- 1 boinc boinc      7646 Jun  3 17:03 heartbeat.json
[2025-06-03 17:03:21] -rw-r--r-- 1 boinc boinc      8192 Jun  3 17:03 boinc_mmap_file
[2025-06-03 17:03:21] -rw-r--r-- 1 boinc boinc        27 Jun  3 17:03 wrapper_checkpoint.txt
[2025-06-03 17:03:21] -rw------- 1 boinc boinc      4552 Jun  3 17:03 pilotlog.txt
[2025-06-03 17:03:21] -rw------- 1 boinc boinc    766616 Jun  3 17:03 log.45006595._016406.job.log.1
[2025-06-03 17:03:21] -rw------- 1 boinc boinc       357 Jun  3 17:03 output.list
[2025-06-03 17:03:21] -rw-r--r-- 1 boinc boinc       620 Jun  3 17:03 runtime_log
[2025-06-03 17:03:21] -rw------- 1 boinc boinc   1024000 Jun  3 17:03 result.tar.gz
[2025-06-03 17:03:21] -rw-r--r-- 1 boinc boinc      8733 Jun  3 17:03 runtime_log.err
[2025-06-03 17:03:21] -rw------- 1 boinc boinc       660 Jun  3 17:03 mzjNDmTmVg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmB8WKDmZGeWRn.diag
[2025-06-03 17:03:21] -rw-r--r-- 1 boinc boinc     21141 Jun  3 17:03 stderr.txt
[2025-06-03 17:03:21] HITS file was successfully produced:
[2025-06-03 17:03:21] -rw------- 1 boinc boinc 180114975 Jun  3 17:02 shared/HITS.pool.root.1
[2025-06-03 17:03:21]  *** Contents of shared directory: ***
[2025-06-03 17:03:21] total 389012
[2025-06-03 17:03:21] -rw-r--r-- 2 boinc boinc 216675217 Jun  3 14:46 ATLAS.root_0
[2025-06-03 17:03:21] -rw-r--r-- 2 boinc boinc    508882 Jun  3 14:46 input.tar.gz
[2025-06-03 17:03:21] -rw-r--r-- 2 boinc boinc     15093 Jun  3 14:46 start_atlas.sh
[2025-06-03 17:03:21] -rw------- 1 boinc boinc 180114975 Jun  3 17:02 HITS.pool.root.1
[2025-06-03 17:03:21] -rw------- 1 boinc boinc   1024000 Jun  3 17:03 result.tar.gz
17:03:22 (1268088): run_atlas exited; CPU time 16030.861681
17:03:22 (1268088): called boinc_finish(0)

</stderr_txt>
]]>

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