Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:05:39 (21387): wrapper (7.7.26015): starting
15:05:39 (21387): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 15:05:39] Arguments: --nthreads 8
[2025-06-03 15:05:39] Threads: 8
[2025-06-03 15:05:39] Checking for CVMFS
[2025-06-03 15:05:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:05:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:05:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:05:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:05:42] 2.11.2.0 29611 31793 94840 146741 0 60 13340227 25165825 4251 130560 0 15799100 99.834 17859784 2161 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 15:05:42] CVMFS is ok
[2025-06-03 15:05:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:05:42] Checking for apptainer binary...
[2025-06-03 15:05:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:05:42] Running /usr/bin/apptainer --version
[2025-06-03 15:05:42] apptainer version 1.3.2-1.el7
[2025-06-03 15:05:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:09:06] cg-vwn406.simple-grid.lan
[2025-06-03 15:09:06] apptainer works
[2025-06-03 15:09:06] Set ATHENA_PROC_NUMBER=8
[2025-06-03 15:09:06] Set ATHENA_CORE_NUMBER=8
[2025-06-03 15:09:06] Starting ATLAS job with PandaID=6677442259
[2025-06-03 15:09:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 19:09:41]  *** The last 200 lines of the pilot log: ***
[2025-06-03 19:09:41] 2025-06-03 17:09:26,963 | INFO     | mean x: 1748963665.0
[2025-06-03 19:09:41] 2025-06-03 17:09:26,963 | INFO     | mean y: 2477986.1733333333
[2025-06-03 19:09:41] 2025-06-03 17:09:26,963 | INFO     | -- intersect: -38290616014.74293
[2025-06-03 19:09:41] 2025-06-03 17:09:26,963 | INFO     | intersect: -38290616014.74293
[2025-06-03 19:09:41] 2025-06-03 17:09:26,963 | INFO     | chi2: 6.792468293262552
[2025-06-03 19:09:41] 2025-06-03 17:09:26,964 | INFO     | sum of square deviations: 3301699115.0
[2025-06-03 19:09:41] 2025-06-03 17:09:26,966 | INFO     | sum of deviations: 76857828217.00003
[2025-06-03 19:09:41] 2025-06-03 17:09:26,966 | INFO     | mean x: 1748963512.5
[2025-06-03 19:09:41] 2025-06-03 17:09:26,966 | INFO     | mean y: 2477672.463636364
[2025-06-03 19:09:41] 2025-06-03 17:09:26,966 | INFO     | -- intersect: -40710359118.3976
[2025-06-03 19:09:41] 2025-06-03 17:09:26,966 | INFO     | intersect: -40710359118.3976
[2025-06-03 19:09:41] 2025-06-03 17:09:26,967 | INFO     | chi2: 6.803199952494832
[2025-06-03 19:09:41] 2025-06-03 17:09:26,967 | INFO     | current chi2=6.803199952494832 (change=-0.1579935123572676 %)
[2025-06-03 19:09:41] 2025-06-03 17:09:26,967 | INFO     | right removable region: 219
[2025-06-03 19:09:41] 2025-06-03 17:09:26,967 | INFO     | sum of square deviations: 3301699115.0
[2025-06-03 19:09:41] 2025-06-03 17:09:26,969 | INFO     | sum of deviations: -1579266667.4999948
[2025-06-03 19:09:41] 2025-06-03 17:09:26,969 | INFO     | mean x: 1748963817.5
[2025-06-03 19:09:41] 2025-06-03 17:09:26,969 | INFO     | mean y: 2530200.0863636364
[2025-06-03 19:09:41] 2025-06-03 17:09:26,970 | INFO     | -- intersect: 839093485.6664593
[2025-06-03 19:09:41] 2025-06-03 17:09:26,970 | INFO     | intersect: 839093485.6664593
[2025-06-03 19:09:41] 2025-06-03 17:09:26,970 | INFO     | chi2: 1.8551812338925109
[2025-06-03 19:09:41] 2025-06-03 17:09:26,970 | INFO     | current chi2=1.8551812338925109 (change=72.68767178887438 %)
[2025-06-03 19:09:41] 2025-06-03 17:09:26,971 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 19:09:41] 2025-06-03 17:09:26,973 | INFO     | sum of deviations: -45206988613.99999
[2025-06-03 19:09:41] 2025-06-03 17:09:26,973 | INFO     | mean x: 1748963970.0
[2025-06-03 19:09:41] 2025-06-03 17:09:26,973 | INFO     | mean y: 2560275.0651162793
[2025-06-03 19:09:41] 2025-06-03 17:09:26,973 | INFO     | -- intersect: 25659333324.694992
[2025-06-03 19:09:41] 2025-06-03 17:09:26,973 | INFO     | intersect: 25659333324.694992
[2025-06-03 19:09:41] 2025-06-03 17:09:26,973 | INFO     | chi2: 0.14726240146014932
[2025-06-03 19:09:41] 2025-06-03 17:09:26,974 | INFO     | current chi2=0.14726240146014932 (change=92.0621016011915 %)
[2025-06-03 19:09:41] 2025-06-03 17:09:26,974 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 19:09:41] 2025-06-03 17:09:26,976 | INFO     | sum of deviations: -50993397709.5
[2025-06-03 19:09:41] 2025-06-03 17:09:26,976 | INFO     | mean x: 1748964122.5
[2025-06-03 19:09:41] 2025-06-03 17:09:26,976 | INFO     | mean y: 2564429.119047619
[2025-06-03 19:09:41] 2025-06-03 17:09:26,976 | INFO     | -- intersect: 31060200072.023476
[2025-06-03 19:09:41] 2025-06-03 17:09:26,977 | INFO     | intersect: 31060200072.023476
[2025-06-03 19:09:41] 2025-06-03 17:09:26,977 | INFO     | chi2: 0.07152007484133224
[2025-06-03 19:09:41] 2025-06-03 17:09:26,977 | INFO     | current chi2=0.07152007484133224 (change=51.43358105518448 %)
[2025-06-03 19:09:41] 2025-06-03 17:09:26,978 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 19:09:41] 2025-06-03 17:09:26,979 | INFO     | sum of deviations: -49766257873.0
[2025-06-03 19:09:41] 2025-06-03 17:09:26,980 | INFO     | mean x: 1748964275.0
[2025-06-03 19:09:41] 2025-06-03 17:09:26,980 | INFO     | mean y: 2563491.975609756
[2025-06-03 19:09:41] 2025-06-03 17:09:26,980 | INFO     | -- intersect: 32585202088.450954
[2025-06-03 19:09:41] 2025-06-03 17:09:26,980 | INFO     | intersect: 32585202088.450954
[2025-06-03 19:09:41] 2025-06-03 17:09:26,980 | INFO     | chi2: 0.06729400778875116
[2025-06-03 19:09:41] 2025-06-03 17:09:26,980 | INFO     | current chi2=0.06729400778875116 (change=5.908924259316892 %)
[2025-06-03 19:09:41] 2025-06-03 17:09:26,981 | INFO     | left removable region: 40
[2025-06-03 19:09:41] 2025-06-03 17:09:26,981 | INFO     | sum of square deviations: 1778377530.0
[2025-06-03 19:09:41] 2025-06-03 17:09:26,982 | INFO     | sum of deviations: -39119673564.00001
[2025-06-03 19:09:41] 2025-06-03 17:09:26,983 | INFO     | mean x: 1748964702.0
[2025-06-03 19:09:41] 2025-06-03 17:09:26,983 | INFO     | mean y: 2558289.4804469272
[2025-06-03 19:09:41] 2025-06-03 17:09:26,983 | INFO     | -- intersect: 38475226248.34661
[2025-06-03 19:09:41] 2025-06-03 17:09:26,983 | INFO     | intersect: 38475226248.34661
[2025-06-03 19:09:41] 2025-06-03 17:09:26,983 | INFO     | chi2: 0.05805684247535354
[2025-06-03 19:09:41] 2025-06-03 17:09:26,984 | INFO     | -- intersect: 38475226248.34661
[2025-06-03 19:09:41] 2025-06-03 17:09:26,984 | INFO     | current memory leak: -22.00 B/s (using 179 data points, chi2=0.06)
[2025-06-03 19:09:41] 2025-06-03 17:09:26,984 | INFO     | ..............................
[2025-06-03 19:09:41] 2025-06-03 17:09:26,985 | INFO     | . Timing measurements:
[2025-06-03 19:09:41] 2025-06-03 17:09:26,985 | INFO     | . get job = 0 s
[2025-06-03 19:09:41] 2025-06-03 17:09:26,985 | INFO     | . initial setup = 10 s
[2025-06-03 19:09:41] 2025-06-03 17:09:26,985 | INFO     | . payload setup = 150 s
[2025-06-03 19:09:41] 2025-06-03 17:09:26,985 | INFO     | . stage-in = 0 s
[2025-06-03 19:09:41] 2025-06-03 17:09:26,985 | INFO     | . payload execution = 13875 s
[2025-06-03 19:09:41] 2025-06-03 17:09:26,985 | INFO     | . stage-out = 1 s
[2025-06-03 19:09:41] 2025-06-03 17:09:26,985 | INFO     | . log creation = 0 s
[2025-06-03 19:09:41] 2025-06-03 17:09:26,985 | INFO     | ..............................
[2025-06-03 19:09:41] 2025-06-03 17:09:27,175 | INFO     | 
[2025-06-03 19:09:41] 2025-06-03 17:09:27,175 | INFO     | job summary report
[2025-06-03 19:09:41] 2025-06-03 17:09:27,175 | INFO     | --------------------------------------------------
[2025-06-03 19:09:41] 2025-06-03 17:09:27,175 | INFO     | PanDA job id: 6677442259
[2025-06-03 19:09:41] 2025-06-03 17:09:27,175 | INFO     | task id: 45006595
[2025-06-03 19:09:41] 2025-06-03 17:09:27,175 | INFO     | errors: (none)
[2025-06-03 19:09:41] 2025-06-03 17:09:27,176 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 19:09:41] 2025-06-03 17:09:27,176 | INFO     | pilot state: finished 
[2025-06-03 19:09:41] 2025-06-03 17:09:27,176 | INFO     | transexitcode: 0
[2025-06-03 19:09:41] 2025-06-03 17:09:27,176 | INFO     | exeerrorcode: 0
[2025-06-03 19:09:41] 2025-06-03 17:09:27,176 | INFO     | exeerrordiag: 
[2025-06-03 19:09:41] 2025-06-03 17:09:27,176 | INFO     | exitcode: 0
[2025-06-03 19:09:41] 2025-06-03 17:09:27,176 | INFO     | exitmsg: OK
[2025-06-03 19:09:41] 2025-06-03 17:09:27,176 | INFO     | cpuconsumptiontime: 49381 s
[2025-06-03 19:09:41] 2025-06-03 17:09:27,176 | INFO     | nevents: 400
[2025-06-03 19:09:41] 2025-06-03 17:09:27,177 | INFO     | neventsw: 0
[2025-06-03 19:09:41] 2025-06-03 17:09:27,177 | INFO     | pid: 13539
[2025-06-03 19:09:41] 2025-06-03 17:09:27,177 | INFO     | pgrp: 13539
[2025-06-03 19:09:41] 2025-06-03 17:09:27,177 | INFO     | corecount: 8
[2025-06-03 19:09:41] 2025-06-03 17:09:27,177 | INFO     | event service: False
[2025-06-03 19:09:41] 2025-06-03 17:09:27,177 | INFO     | sizes: {0: 2404354, 1: 2405039, 2: 2405238, 13: 2405238, 23: 2405294, 34: 2405322, 45: 2405478, 55: 2405506, 66: 2405534, 77: 2405562, 83: 2405824, 88: 2406160, 14
[2025-06-03 19:09:41] 2025-06-03 17:09:27,177 | INFO     | --------------------------------------------------
[2025-06-03 19:09:41] 2025-06-03 17:09:27,177 | INFO     | 
[2025-06-03 19:09:41] 2025-06-03 17:09:27,178 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-03 19:09:41] 2025-06-03 17:09:27,207 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 19:09:41] 2025-06-03 17:09:27,207 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 19:09:41] 2025-06-03 17:09:27,208 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 19:09:41] 2025-06-03 17:09:27,208 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 19:09:41] 2025-06-03 17:09:27,208 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 19:09:41] 2025-06-03 17:09:27,208 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 19:09:41] 2025-06-03 17:09:27,208 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 19:09:41] 2025-06-03 17:09:27,208 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 19:09:41] 2025-06-03 17:09:27,208 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 19:09:41] 2025-06-03 17:09:27,208 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 19:09:41] 2025-06-03 17:09:27,208 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 19:09:41] 2025-06-03 17:09:27,208 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 19:09:41] 2025-06-03 17:09:27,209 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 19:09:41] 2025-06-03 17:09:27,209 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 19:09:41] 2025-06-03 17:09:27,209 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 19:09:41] 2025-06-03 17:09:27,209 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 19:09:41] 2025-06-03 17:09:27,209 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 19:09:41] 2025-06-03 17:09:27,209 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 19:09:41] 2025-06-03 17:09:27,209 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 19:09:41] 2025-06-03 17:09:27,209 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 19:09:41] 2025-06-03 17:09:27,209 | INFO     | job 6677442259 has completed (purged errors)
[2025-06-03 19:09:41] 2025-06-03 17:09:27,210 | INFO     | overall cleanup function is called
[2025-06-03 19:09:41] 2025-06-03 17:09:28,218 | INFO     | --- collectZombieJob: --- 10, [13539]
[2025-06-03 19:09:41] 2025-06-03 17:09:28,218 | INFO     | zombie collector waiting for pid 13539
[2025-06-03 19:09:41] 2025-06-03 17:09:28,219 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 19:09:41] 2025-06-03 17:09:28,219 | INFO     | collected zombie processes
[2025-06-03 19:09:41] 2025-06-03 17:09:28,219 | INFO     | will attempt to kill all subprocesses of pid=13539
[2025-06-03 19:09:41] 2025-06-03 17:09:28,316 | INFO     | process IDs to be killed: [13539] (in reverse order)
[2025-06-03 19:09:41] 2025-06-03 17:09:28,389 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 19:09:41] 2025-06-03 17:09:28,390 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 19:09:41] 2025-06-03 17:09:28,393 | INFO     | did not find any defunct processes belonging to 13539
[2025-06-03 19:09:41] 2025-06-03 17:09:28,396 | INFO     | did not find any defunct processes belonging to 13539
[2025-06-03 19:09:41] 2025-06-03 17:09:28,396 | INFO     | ready for new job
[2025-06-03 19:09:41] 2025-06-03 17:09:28,396 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 19:09:41] 2025-06-03 17:09:28,398 | INFO     | **************************************
[2025-06-03 19:09:41] 2025-06-03 17:09:28,398 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 19:09:41] 2025-06-03 17:09:28,398 | INFO     | **************************************
[2025-06-03 19:09:41] 2025-06-03 17:09:28,398 | INFO     | 
[2025-06-03 19:09:41] 2025-06-03 17:09:28,399 | INFO     | pilot is running in a VM
[2025-06-03 19:09:41] 2025-06-03 17:09:28,399 | INFO     | architecture information:
[2025-06-03 19:09:41] 2025-06-03 17:09:28,400 | INFO     | executing command: cat /etc/os-release
[2025-06-03 19:09:41] 2025-06-03 17:09:28,419 | INFO     | cat /etc/os-release:
[2025-06-03 19:09:41] NAME="CentOS Linux"
[2025-06-03 19:09:41] VERSION="7 (Core)"
[2025-06-03 19:09:41] ID="centos"
[2025-06-03 19:09:41] ID_LIKE="rhel fedora"
[2025-06-03 19:09:41] VERSION_ID="7"
[2025-06-03 19:09:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 19:09:41] ANSI_COLOR="0;31"
[2025-06-03 19:09:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 19:09:41] HOME_URL="https://www.centos.org/"
[2025-06-03 19:09:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 19:09:41] 
[2025-06-03 19:09:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 19:09:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 19:09:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 19:09:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 19:09:41] 
[2025-06-03 19:09:41] 2025-06-03 17:09:28,420 | INFO     | **************************************
[2025-06-03 19:09:41] 2025-06-03 17:09:28,923 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-03 19:09:41] 2025-06-03 17:09:28,959 | INFO     | sufficient remaining disk space (497038655488 B)
[2025-06-03 19:09:41] 2025-06-03 17:09:28,960 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 19:09:41] 2025-06-03 17:09:28,960 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 19:09:41] 2025-06-03 17:09:28,960 | INFO     | update_server=False
[2025-06-03 19:09:41] 2025-06-03 17:09:28,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 19:09:41] 2025-06-03 17:09:28,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:09:41] 2025-06-03 17:09:28,960 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 19:09:41] 2025-06-03 17:09:28,961 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 19:09:41] 2025-06-03 17:09:28,961 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 19:09:41] 2025-06-03 17:09:28,961 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 19:09:41] 2025-06-03 17:09:28,996 | INFO     | all job control threads have been joined
[2025-06-03 19:09:41] 2025-06-03 17:09:29,166 | INFO     | all data control threads have been joined
[2025-06-03 19:09:41] 2025-06-03 17:09:29,758 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 19:09:41] 2025-06-03 17:09:29,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 19:09:41] 2025-06-03 17:09:29,918 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:09:41] 2025-06-03 17:09:29,919 | INFO     | aborting loop
[2025-06-03 19:09:41] 2025-06-03 17:09:29,965 | INFO     | [job] retrieve thread has finished
[2025-06-03 19:09:41] 2025-06-03 17:09:29,965 | INFO     | [job] queue monitor thread has finished
[2025-06-03 19:09:41] 2025-06-03 17:09:30,002 | INFO     | [job] control thread has finished
[2025-06-03 19:09:41] 2025-06-03 17:09:30,171 | INFO     | [data] control thread has finished
[2025-06-03 19:09:41] 2025-06-03 17:09:30,344 | INFO     | [job] validate thread has finished
[2025-06-03 19:09:41] 2025-06-03 17:09:30,372 | INFO     | all payload control threads have been joined
[2025-06-03 19:09:41] 2025-06-03 17:09:30,625 | INFO     | [payload] validate_post thread has finished
[2025-06-03 19:09:41] 2025-06-03 17:09:30,641 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 19:09:41] 2025-06-03 17:09:30,905 | INFO     | [data] copytool_in thread has finished
[2025-06-03 19:09:41] 2025-06-03 17:09:30,921 | INFO     | [job] job monitor thread has finished
[2025-06-03 19:09:41] 2025-06-03 17:09:31,006 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 19:09:41] 2025-06-03 17:09:31,336 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 19:09:41] 2025-06-03 17:09:31,378 | INFO     | [payload] control thread has finished
[2025-06-03 19:09:41] 2025-06-03 17:09:31,422 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 19:09:41] 2025-06-03 17:09:31,556 | INFO     | [payload] failed_post thread has finished
[2025-06-03 19:09:41] 2025-06-03 17:09:31,764 | INFO     | [data] copytool_out thread has finished
[2025-06-03 19:09:41] 2025-06-03 17:09:33,886 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 19:09:41] 2025-06-03 17:09:35,545 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140204600538944)>', '<ExcThread(monitor, started 140204140640000)>']
[2025-06-03 19:09:41] 2025-06-03 17:09:35,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 19:09:41] 2025-06-03 17:09:35,991 | INFO     | [monitor] control thread has ended
[2025-06-03 19:09:41] 2025-06-03 17:09:40,571 | INFO     | all workflow threads have been joined
[2025-06-03 19:09:41] 2025-06-03 17:09:40,572 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 19:09:41] 2025-06-03 17:09:40,572 | INFO     | traces error code: 0
[2025-06-03 19:09:41] 2025-06-03 17:09:40,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 19:09:41] 2025-06-03 17:09:40,779 [wrapper] ==== pilot stdout END ====
[2025-06-03 19:09:41] 2025-06-03 17:09:40,787 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 19:09:41] 2025-06-03 17:09:40,791 [wrapper] pilotpid: 32181
[2025-06-03 19:09:41] 2025-06-03 17:09:40,795 [wrapper] Pilot exit status: 0
[2025-06-03 19:09:41] 2025-06-03 17:09:40,821 [wrapper] pandaids: 6677442259
[2025-06-03 19:09:41] 2025-06-03 17:09:40,862 [wrapper] cleanup supervisor_pilot 26858 32182
[2025-06-03 19:09:41] 2025-06-03 17:09:40,870 [wrapper] Test setup, not cleaning
[2025-06-03 19:09:41] 2025-06-03 17:09:40,874 [wrapper] apfmon messages muted
[2025-06-03 19:09:41] 2025-06-03 17:09:40,878 [wrapper] ==== wrapper stdout END ====
[2025-06-03 19:09:41] 2025-06-03 17:09:40,882 [wrapper] ==== wrapper stderr END ====
[2025-06-03 19:09:41]  *** Error codes and diagnostics ***
[2025-06-03 19:09:41]     "exeErrorCode": 0,
[2025-06-03 19:09:41]     "exeErrorDiag": "",
[2025-06-03 19:09:41]     "pilotErrorCode": 0,
[2025-06-03 19:09:41]     "pilotErrorDiag": "",
[2025-06-03 19:09:41]  *** Listing of results directory ***
[2025-06-03 19:09:41] total 386812
[2025-06-03 19:09:41] -rw-r--r--. 1 boinc boinc    495897 Jun  3 03:24 pilot3.tar.gz
[2025-06-03 19:09:41] -rw-r--r--. 1 boinc boinc      5111 Jun  3 03:30 queuedata.json
[2025-06-03 19:09:41] -rwx------. 1 boinc boinc     37140 Jun  3 03:30 runpilot2-wrapper.sh
[2025-06-03 19:09:41] -rw-r--r--. 1 boinc boinc       100 Jun  3 15:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 19:09:41] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 15:05 run_atlas
[2025-06-03 19:09:41] -rw-r--r--. 1 boinc boinc       105 Jun  3 15:05 job.xml
[2025-06-03 19:09:41] -rw-r--r--. 2 boinc boinc 213895750 Jun  3 15:05 EVNT.45006593._000653.pool.root.1
[2025-06-03 19:09:41] -rw-r--r--. 2 boinc boinc    508880 Jun  3 15:05 input.tar.gz
[2025-06-03 19:09:41] -rw-r--r--. 1 boinc boinc      6392 Jun  3 15:05 init_data.xml
[2025-06-03 19:09:41] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:05 start_atlas.sh
[2025-06-03 19:09:41] drwxrwx--x. 2 boinc boinc        68 Jun  3 15:05 shared
[2025-06-03 19:09:41] -rw-r--r--. 1 boinc boinc         0 Jun  3 15:05 boinc_lockfile
[2025-06-03 19:09:41] -rw-r--r--. 1 boinc boinc      2524 Jun  3 15:09 pandaJob.out
[2025-06-03 19:09:41] -rw-------. 1 boinc boinc    982666 Jun  3 15:12 agis_schedconf.cvmfs.json
[2025-06-03 19:09:41] drwx------. 4 boinc boinc      4096 Jun  3 15:12 pilot3
[2025-06-03 19:09:41] -rw-------. 1 boinc boinc 175166892 Jun  3 19:08 HITS.45006595._016314.pool.root.1
[2025-06-03 19:09:41] -rw-------. 1 boinc boinc        95 Jun  3 19:08 pilot_heartbeat.json
[2025-06-03 19:09:41] -rw-r--r--. 1 boinc boinc       531 Jun  3 19:08 boinc_task_state.xml
[2025-06-03 19:09:41] -rw-------. 1 boinc boinc      1022 Jun  3 19:09 memory_monitor_summary.json
[2025-06-03 19:09:41] -rw-r--r--. 1 boinc boinc        28 Jun  3 19:09 wrapper_checkpoint.txt
[2025-06-03 19:09:41] -rw-r--r--. 1 boinc boinc      8192 Jun  3 19:09 boinc_mmap_file
[2025-06-03 19:09:41] -rw-------. 1 boinc boinc   1603667 Jun  3 19:09 agis_ddmendpoints.agis.ALL.json
[2025-06-03 19:09:41] -rw-------. 1 boinc boinc    386043 Jun  3 19:09 log.45006595._016314.job.log.tgz.1
[2025-06-03 19:09:41] -rw-------. 1 boinc boinc      7701 Jun  3 19:09 heartbeat.json
[2025-06-03 19:09:41] -rw-------. 1 boinc boinc      4539 Jun  3 19:09 pilotlog.txt
[2025-06-03 19:09:41] -rw-------. 1 boinc boinc   1218379 Jun  3 19:09 log.45006595._016314.job.log.1
[2025-06-03 19:09:41] -rw-------. 1 boinc boinc       357 Jun  3 19:09 output.list
[2025-06-03 19:09:41] -rw-r--r--. 1 boinc boinc       620 Jun  3 19:09 runtime_log
[2025-06-03 19:09:41] -rw-------. 1 boinc boinc   1628160 Jun  3 19:09 result.tar.gz
[2025-06-03 19:09:41] -rw-------. 1 boinc boinc       656 Jun  3 19:09 zx4NDmUfVg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmg6WKDmpFivlm.diag
[2025-06-03 19:09:41] -rw-r--r--. 1 boinc boinc      8659 Jun  3 19:09 runtime_log.err
[2025-06-03 19:09:41] -rw-r--r--. 1 boinc boinc     20476 Jun  3 19:09 stderr.txt
[2025-06-03 19:09:41] HITS file was successfully produced:
[2025-06-03 19:09:41] -rw-------. 1 boinc boinc 175166892 Jun  3 19:08 shared/HITS.pool.root.1
[2025-06-03 19:09:41]  *** Contents of shared directory: ***
[2025-06-03 19:09:41] total 382056
[2025-06-03 19:09:41] -rw-r--r--. 2 boinc boinc 213895750 Jun  3 15:05 ATLAS.root_0
[2025-06-03 19:09:41] -rw-r--r--. 2 boinc boinc    508880 Jun  3 15:05 input.tar.gz
[2025-06-03 19:09:41] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:05 start_atlas.sh
[2025-06-03 19:09:41] -rw-------. 1 boinc boinc 175166892 Jun  3 19:08 HITS.pool.root.1
[2025-06-03 19:09:41] -rw-------. 1 boinc boinc   1628160 Jun  3 19:09 result.tar.gz
19:09:42 (21387): run_atlas exited; CPU time 49567.015348
19:09:42 (21387): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN