Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:20:22 (1890): wrapper (7.7.26015): starting
16:20:22 (1890): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 16:20:22] Arguments: --nthreads 8
[2025-06-03 16:20:22] Threads: 8
[2025-06-03 16:20:22] Checking for CVMFS
[2025-06-03 16:20:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 16:20:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 16:20:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 16:20:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 16:20:24] 2.11.2.0 23942 31877 101560 146743 1 60 21422468 25165824 4634 130560 0 17228710 99.859 16190710 1806 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 16:20:24] CVMFS is ok
[2025-06-03 16:20:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 16:20:25] Checking for apptainer binary...
[2025-06-03 16:20:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 16:20:25] Running /usr/bin/apptainer --version
[2025-06-03 16:20:25] apptainer version 1.3.2-1.el7
[2025-06-03 16:20:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 16:51:08] cg-vwn380.simple-grid.lan
[2025-06-03 16:51:08] apptainer works
[2025-06-03 16:51:09] Set ATHENA_PROC_NUMBER=8
[2025-06-03 16:51:09] Set ATHENA_CORE_NUMBER=8
[2025-06-03 16:51:09] Starting ATLAS job with PandaID=6677419464
[2025-06-03 16:51:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:16:04]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:16:04] 2025-06-03 18:46:31,881 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6677419464/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:16:04] 2025-06-03 18:46:31,882 | INFO     | extracted standard info from prmon json
[2025-06-03 21:16:04] 2025-06-03 18:46:31,882 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:16:04] 2025-06-03 18:46:31,882 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:16:04] 2025-06-03 18:46:31,883 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:16:04] 2025-06-03 18:46:31,883 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:16:04] 2025-06-03 18:46:31,888 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:16:04] 2025-06-03 18:46:31,889 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 21:16:04] 2025-06-03 18:46:31,891 | INFO     | sum of deviations: 75708993745.00003
[2025-06-03 21:16:04] 2025-06-03 18:46:31,891 | INFO     | mean x: 1748969660.0
[2025-06-03 21:16:04] 2025-06-03 18:46:31,891 | INFO     | mean y: 2416480.502283105
[2025-06-03 21:16:04] 2025-06-03 18:46:31,891 | INFO     | -- intersect: -40653900751.24083
[2025-06-03 21:16:04] 2025-06-03 18:46:31,891 | INFO     | intersect: -40653900751.24083
[2025-06-03 21:16:04] 2025-06-03 18:46:31,892 | INFO     | chi2: 5.015611677271799
[2025-06-03 21:16:04] 2025-06-03 18:46:31,909 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 21:16:04] 2025-06-03 18:46:31,911 | INFO     | sum of deviations: 87990369453.00002
[2025-06-03 21:16:04] 2025-06-03 18:46:31,912 | INFO     | mean x: 1748969507.5
[2025-06-03 21:16:04] 2025-06-03 18:46:31,912 | INFO     | mean y: 2424884.112149533
[2025-06-03 21:16:04] 2025-06-03 18:46:31,912 | INFO     | -- intersect: -50639140107.72251
[2025-06-03 21:16:04] 2025-06-03 18:46:31,912 | INFO     | intersect: -50639140107.72251
[2025-06-03 21:16:04] 2025-06-03 18:46:31,912 | INFO     | chi2: 4.277623032646895
[2025-06-03 21:16:04] 2025-06-03 18:46:31,913 | INFO     | current chi2=4.277623032646895 (change=14.713831375126055 %)
[2025-06-03 21:16:04] 2025-06-03 18:46:31,913 | INFO     | right removable region: 213
[2025-06-03 21:16:04] 2025-06-03 18:46:31,913 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 21:16:04] 2025-06-03 18:46:31,915 | INFO     | sum of deviations: 8142893782.00001
[2025-06-03 21:16:04] 2025-06-03 18:46:31,915 | INFO     | mean x: 1748969812.5
[2025-06-03 21:16:04] 2025-06-03 18:46:31,915 | INFO     | mean y: 2463645.186915888
[2025-06-03 21:16:04] 2025-06-03 18:46:31,915 | INFO     | -- intersect: -4684060109.15847
[2025-06-03 21:16:04] 2025-06-03 18:46:31,915 | INFO     | intersect: -4684060109.15847
[2025-06-03 21:16:04] 2025-06-03 18:46:31,916 | INFO     | chi2: 1.1914823768008298
[2025-06-03 21:16:04] 2025-06-03 18:46:31,916 | INFO     | current chi2=1.1914823768008298 (change=76.24452502573072 %)
[2025-06-03 21:16:04] 2025-06-03 18:46:31,916 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 21:16:04] 2025-06-03 18:46:31,939 | INFO     | sum of deviations: -8323156529.0
[2025-06-03 21:16:04] 2025-06-03 18:46:31,940 | INFO     | mean x: 1748969965.0
[2025-06-03 21:16:04] 2025-06-03 18:46:31,940 | INFO     | mean y: 2475586.937799043
[2025-06-03 21:16:04] 2025-06-03 18:46:31,940 | INFO     | -- intersect: 5144842655.368687
[2025-06-03 21:16:04] 2025-06-03 18:46:31,940 | INFO     | intersect: 5144842655.368687
[2025-06-03 21:16:04] 2025-06-03 18:46:31,941 | INFO     | chi2: 0.819192389159518
[2025-06-03 21:16:04] 2025-06-03 18:46:31,941 | INFO     | current chi2=0.819192389159518 (change=31.24594999389944 %)
[2025-06-03 21:16:04] 2025-06-03 18:46:31,941 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 21:16:04] 2025-06-03 18:46:31,943 | INFO     | sum of deviations: -4920783929.0
[2025-06-03 21:16:04] 2025-06-03 18:46:31,943 | INFO     | mean x: 1748970117.5
[2025-06-03 21:16:04] 2025-06-03 18:46:31,943 | INFO     | mean y: 2472970.3921568627
[2025-06-03 21:16:04] 2025-06-03 18:46:31,943 | INFO     | -- intersect: 3271798716.3473644
[2025-06-03 21:16:04] 2025-06-03 18:46:31,943 | INFO     | intersect: 3271798716.3473644
[2025-06-03 21:16:04] 2025-06-03 18:46:31,944 | INFO     | chi2: 0.7938783091155759
[2025-06-03 21:16:04] 2025-06-03 18:46:31,944 | INFO     | current chi2=0.7938783091155759 (change=3.09012637067027 %)
[2025-06-03 21:16:04] 2025-06-03 18:46:31,944 | INFO     | left removable region: 30
[2025-06-03 21:16:04] 2025-06-03 18:46:31,945 | INFO     | sum of square deviations: 1900284932.0
[2025-06-03 21:16:04] 2025-06-03 18:46:31,946 | INFO     | sum of deviations: 4875436589.999992
[2025-06-03 21:16:04] 2025-06-03 18:46:31,946 | INFO     | mean x: 1748970392.0
[2025-06-03 21:16:04] 2025-06-03 18:46:31,946 | INFO     | mean y: 2486325.950819672
[2025-06-03 21:16:04] 2025-06-03 18:46:31,946 | INFO     | -- intersect: -4484732459.186308
[2025-06-03 21:16:04] 2025-06-03 18:46:31,946 | INFO     | intersect: -4484732459.186308
[2025-06-03 21:16:04] 2025-06-03 18:46:31,947 | INFO     | chi2: 0.00028122953839166505
[2025-06-03 21:16:04] 2025-06-03 18:46:31,947 | INFO     | -- intersect: -4484732459.186308
[2025-06-03 21:16:04] 2025-06-03 18:46:31,947 | INFO     | current memory leak: 2.57 B/s (using 183 data points, chi2=0.00)
[2025-06-03 21:16:04] 2025-06-03 18:46:31,948 | INFO     | ..............................
[2025-06-03 21:16:04] 2025-06-03 18:46:31,948 | INFO     | . Timing measurements:
[2025-06-03 21:16:04] 2025-06-03 18:46:31,948 | INFO     | . get job = 0 s
[2025-06-03 21:16:04] 2025-06-03 18:46:31,948 | INFO     | . initial setup = 14 s
[2025-06-03 21:16:04] 2025-06-03 18:46:31,948 | INFO     | . payload setup = 164 s
[2025-06-03 21:16:04] 2025-06-03 18:46:31,949 | INFO     | . stage-in = 0 s
[2025-06-03 21:16:04] 2025-06-03 18:46:31,949 | INFO     | . payload execution = 13458 s
[2025-06-03 21:16:04] 2025-06-03 18:46:31,949 | INFO     | . stage-out = 2 s
[2025-06-03 21:16:04] 2025-06-03 18:46:31,949 | INFO     | . log creation = 0 s
[2025-06-03 21:16:04] 2025-06-03 18:46:31,949 | INFO     | ..............................
[2025-06-03 21:16:04] 2025-06-03 18:46:32,125 | INFO     | 
[2025-06-03 21:16:04] 2025-06-03 18:46:32,125 | INFO     | job summary report
[2025-06-03 21:16:04] 2025-06-03 18:46:32,125 | INFO     | --------------------------------------------------
[2025-06-03 21:16:04] 2025-06-03 18:46:32,126 | INFO     | PanDA job id: 6677419464
[2025-06-03 21:16:04] 2025-06-03 18:46:32,126 | INFO     | task id: 45006595
[2025-06-03 21:16:04] 2025-06-03 18:46:32,126 | INFO     | errors: (none)
[2025-06-03 21:16:04] 2025-06-03 18:46:32,126 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:16:04] 2025-06-03 18:46:32,126 | INFO     | pilot state: finished 
[2025-06-03 21:16:04] 2025-06-03 18:46:32,126 | INFO     | transexitcode: 0
[2025-06-03 21:16:04] 2025-06-03 18:46:32,126 | INFO     | exeerrorcode: 0
[2025-06-03 21:16:04] 2025-06-03 18:46:32,126 | INFO     | exeerrordiag: 
[2025-06-03 21:16:04] 2025-06-03 18:46:32,126 | INFO     | exitcode: 0
[2025-06-03 21:16:04] 2025-06-03 18:46:32,126 | INFO     | exitmsg: OK
[2025-06-03 21:16:04] 2025-06-03 18:46:32,126 | INFO     | cpuconsumptiontime: 47719 s
[2025-06-03 21:16:04] 2025-06-03 18:46:32,126 | INFO     | nevents: 400
[2025-06-03 21:16:04] 2025-06-03 18:46:32,127 | INFO     | neventsw: 0
[2025-06-03 21:16:04] 2025-06-03 18:46:32,127 | INFO     | pid: 2606
[2025-06-03 21:16:04] 2025-06-03 18:46:32,127 | INFO     | pgrp: 2606
[2025-06-03 21:16:04] 2025-06-03 18:46:32,127 | INFO     | corecount: 8
[2025-06-03 21:16:04] 2025-06-03 18:46:32,127 | INFO     | event service: False
[2025-06-03 21:16:04] 2025-06-03 18:46:32,127 | INFO     | sizes: {0: 2404354, 1: 2405039, 2: 2405238, 13: 2405238, 23: 2405294, 34: 2405322, 45: 2405478, 56: 2405506, 66: 2405534, 77: 2405562, 88: 2405618, 91: 2406132, 98
[2025-06-03 21:16:04] 2025-06-03 18:46:32,127 | INFO     | --------------------------------------------------
[2025-06-03 21:16:04] 2025-06-03 18:46:32,127 | INFO     | 
[2025-06-03 21:16:04] 2025-06-03 18:46:32,127 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 21:16:04] 2025-06-03 18:46:32,562 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:16:04] 2025-06-03 18:46:32,562 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:16:04] 2025-06-03 18:46:32,562 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:16:04] 2025-06-03 18:46:32,562 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:16:04] 2025-06-03 18:46:32,562 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:16:04] 2025-06-03 18:46:32,562 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:16:04] 2025-06-03 18:46:32,562 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:16:04] 2025-06-03 18:46:32,562 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:16:04] 2025-06-03 18:46:32,563 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:16:04] 2025-06-03 18:46:32,563 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:16:04] 2025-06-03 18:46:32,563 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:16:04] 2025-06-03 18:46:32,563 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:16:04] 2025-06-03 18:46:32,563 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:16:04] 2025-06-03 18:46:32,563 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:16:04] 2025-06-03 18:46:32,563 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:16:04] 2025-06-03 18:46:32,563 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:16:04] 2025-06-03 18:46:32,563 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:16:04] 2025-06-03 18:46:32,563 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:16:04] 2025-06-03 18:46:32,563 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:16:04] 2025-06-03 18:46:32,563 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:16:04] 2025-06-03 18:46:32,564 | INFO     | job 6677419464 has completed (purged errors)
[2025-06-03 21:16:04] 2025-06-03 18:46:32,564 | INFO     | overall cleanup function is called
[2025-06-03 21:16:04] 2025-06-03 18:46:33,572 | INFO     | --- collectZombieJob: --- 10, [2606]
[2025-06-03 21:16:04] 2025-06-03 18:46:33,572 | INFO     | zombie collector waiting for pid 2606
[2025-06-03 21:16:04] 2025-06-03 18:46:33,573 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:16:04] 2025-06-03 18:46:33,573 | INFO     | collected zombie processes
[2025-06-03 21:16:04] 2025-06-03 18:46:33,573 | INFO     | will attempt to kill all subprocesses of pid=2606
[2025-06-03 21:16:04] 2025-06-03 18:46:33,700 | INFO     | process IDs to be killed: [2606] (in reverse order)
[2025-06-03 21:16:04] 2025-06-03 18:46:33,829 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:16:04] 2025-06-03 18:46:33,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:16:04] 2025-06-03 18:46:33,834 | INFO     | did not find any defunct processes belonging to 2606
[2025-06-03 21:16:04] 2025-06-03 18:46:33,837 | INFO     | did not find any defunct processes belonging to 2606
[2025-06-03 21:16:04] 2025-06-03 18:46:33,838 | INFO     | ready for new job
[2025-06-03 21:16:04] 2025-06-03 18:46:33,838 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:16:04] 2025-06-03 18:46:33,840 | INFO     | **************************************
[2025-06-03 21:16:04] 2025-06-03 18:46:33,840 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:16:04] 2025-06-03 18:46:33,840 | INFO     | **************************************
[2025-06-03 21:16:04] 2025-06-03 18:46:33,840 | INFO     | 
[2025-06-03 21:16:04] 2025-06-03 18:46:33,841 | INFO     | pilot is running in a VM
[2025-06-03 21:16:04] 2025-06-03 18:46:33,841 | INFO     | architecture information:
[2025-06-03 21:16:04] 2025-06-03 18:46:33,842 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:16:04] 2025-06-03 18:46:33,868 | INFO     | cat /etc/os-release:
[2025-06-03 21:16:04] NAME="CentOS Linux"
[2025-06-03 21:16:04] VERSION="7 (Core)"
[2025-06-03 21:16:04] ID="centos"
[2025-06-03 21:16:04] ID_LIKE="rhel fedora"
[2025-06-03 21:16:04] VERSION_ID="7"
[2025-06-03 21:16:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:16:04] ANSI_COLOR="0;31"
[2025-06-03 21:16:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:16:04] HOME_URL="https://www.centos.org/"
[2025-06-03 21:16:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:16:04] 
[2025-06-03 21:16:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:16:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:16:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:16:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:16:04] 
[2025-06-03 21:16:04] 2025-06-03 18:46:33,868 | INFO     | **************************************
[2025-06-03 21:16:04] 2025-06-03 18:46:34,372 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 21:16:04] 2025-06-03 18:46:34,436 | INFO     | sufficient remaining disk space (496818454528 B)
[2025-06-03 21:16:04] 2025-06-03 18:46:34,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:16:04] 2025-06-03 18:46:34,437 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:16:04] 2025-06-03 18:46:34,437 | INFO     | update_server=False
[2025-06-03 21:16:04] 2025-06-03 18:46:34,437 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:16:04] 2025-06-03 18:46:34,438 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:16:04] 2025-06-03 18:46:34,724 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:16:04] 2025-06-03 18:46:34,724 | INFO     | aborting loop
[2025-06-03 21:16:04] 2025-06-03 18:46:34,756 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:16:04] 2025-06-03 18:46:34,757 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:16:04] 2025-06-03 18:46:34,757 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:16:04] 2025-06-03 18:46:34,761 | INFO     | all job control threads have been joined
[2025-06-03 21:16:04] 2025-06-03 18:46:35,062 | INFO     | all data control threads have been joined
[2025-06-03 21:16:04] 2025-06-03 18:46:35,443 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:16:04] 2025-06-03 18:46:35,473 | INFO     | [job] validate thread has finished
[2025-06-03 21:16:04] 2025-06-03 18:46:35,547 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:16:04] 2025-06-03 18:46:35,731 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:16:04] 2025-06-03 18:46:35,767 | INFO     | [job] control thread has finished
[2025-06-03 21:16:04] 2025-06-03 18:46:35,784 | INFO     | all payload control threads have been joined
[2025-06-03 21:16:04] 2025-06-03 18:46:35,787 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:16:04] 2025-06-03 18:46:35,788 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:16:04] 2025-06-03 18:46:35,812 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:16:04] 2025-06-03 18:46:35,954 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:16:04] 2025-06-03 18:46:36,068 | INFO     | [data] control thread has finished
[2025-06-03 21:16:04] 2025-06-03 18:46:36,409 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:16:04] 2025-06-03 18:46:36,445 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:16:04] 2025-06-03 18:46:36,723 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:16:04] 2025-06-03 18:46:36,790 | INFO     | [payload] control thread has finished
[2025-06-03 21:16:04] 2025-06-03 18:46:36,952 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:16:04] 2025-06-03 18:46:37,140 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:16:04] 2025-06-03 18:46:38,146 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:16:04] 2025-06-03 18:46:40,732 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:16:04] 2025-06-03 18:46:42,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140053931407168)>', '<ExcThread(monitor, started 140053481240320)>']
[2025-06-03 21:16:04] 2025-06-03 18:46:42,804 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:16:04] 2025-06-03 18:46:42,804 | INFO     | [monitor] control thread has ended
[2025-06-03 21:16:04] 2025-06-03 18:46:47,391 | INFO     | all workflow threads have been joined
[2025-06-03 21:16:04] 2025-06-03 18:46:47,391 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:16:04] 2025-06-03 18:46:47,392 | INFO     | traces error code: 0
[2025-06-03 21:16:04] 2025-06-03 18:46:47,392 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:16:04] 2025-06-03 18:46:47,665 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:16:04] 2025-06-03 18:46:47,674 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:16:04] 2025-06-03 18:46:47,711 [wrapper] pilotpid: 26350
[2025-06-03 21:16:04] 2025-06-03 18:46:47,741 [wrapper] Pilot exit status: 0
[2025-06-03 21:16:04] 2025-06-03 18:46:48,254 [wrapper] pandaids: 6677419464
[2025-06-03 21:16:04] 2025-06-03 18:46:49,018 [wrapper] cleanup supervisor_pilot 23501 26351
[2025-06-03 21:16:04] 2025-06-03 18:46:49,071 [wrapper] Test setup, not cleaning
[2025-06-03 21:16:04] 2025-06-03 18:46:49,162 [wrapper] apfmon messages muted
[2025-06-03 21:16:04] 2025-06-03 18:46:49,235 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:16:04] 2025-06-03 18:46:49,350 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:16:04]  *** Error codes and diagnostics ***
[2025-06-03 21:16:04]     "exeErrorCode": 0,
[2025-06-03 21:16:04]     "exeErrorDiag": "",
[2025-06-03 21:16:04]     "pilotErrorCode": 0,
[2025-06-03 21:16:04]     "pilotErrorDiag": "",
[2025-06-03 21:16:04]  *** Listing of results directory ***
[2025-06-03 21:16:05] total 386492
[2025-06-03 21:16:05] -rw-r--r--. 1 boinc boinc    495897 Jun  3 01:14 pilot3.tar.gz
[2025-06-03 21:16:05] -rwx------. 1 boinc boinc     37140 Jun  3 01:16 runpilot2-wrapper.sh
[2025-06-03 21:16:05] -rw-r--r--. 1 boinc boinc      5111 Jun  3 01:16 queuedata.json
[2025-06-03 21:16:05] -rw-r--r--. 1 boinc boinc       100 Jun  3 16:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:16:05] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 16:20 run_atlas
[2025-06-03 21:16:05] -rw-r--r--. 1 boinc boinc       105 Jun  3 16:20 job.xml
[2025-06-03 21:16:05] -rw-r--r--. 1 boinc boinc      6392 Jun  3 16:20 init_data.xml
[2025-06-03 21:16:05] -rw-r--r--. 2 boinc boinc 212368146 Jun  3 16:20 EVNT.45006593._000566.pool.root.1
[2025-06-03 21:16:05] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:20 start_atlas.sh
[2025-06-03 21:16:05] drwxrwx--x. 2 boinc boinc        68 Jun  3 16:20 shared
[2025-06-03 21:16:05] -rw-r--r--. 2 boinc boinc    508876 Jun  3 16:20 input.tar.gz
[2025-06-03 21:16:05] -rw-r--r--. 1 boinc boinc         0 Jun  3 16:20 boinc_lockfile
[2025-06-03 21:16:05] -rw-r--r--. 1 boinc boinc      2524 Jun  3 16:51 pandaJob.out
[2025-06-03 21:16:05] -rw-------. 1 boinc boinc    982724 Jun  3 16:54 agis_schedconf.cvmfs.json
[2025-06-03 21:16:05] drwx------. 4 boinc boinc      4096 Jun  3 16:54 pilot3
[2025-06-03 21:16:05] -rw-------. 1 boinc boinc 176402366 Jun  3 20:44 HITS.45006595._014134.pool.root.1
[2025-06-03 21:16:05] -rw-r--r--. 1 boinc boinc       531 Jun  3 20:44 boinc_task_state.xml
[2025-06-03 21:16:05] -rw-------. 1 boinc boinc      1020 Jun  3 20:45 memory_monitor_summary.json
[2025-06-03 21:16:05] -rw-------. 1 boinc boinc   1603667 Jun  3 20:45 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:16:05] -rw-------. 1 boinc boinc    379429 Jun  3 20:45 log.45006595._014134.job.log.tgz.1
[2025-06-03 21:16:05] -rw-------. 1 boinc boinc        95 Jun  3 20:46 pilot_heartbeat.json
[2025-06-03 21:16:05] -rw-------. 1 boinc boinc      7685 Jun  3 20:46 heartbeat.json
[2025-06-03 21:16:05] -rw-------. 1 boinc boinc      4416 Jun  3 20:46 pilotlog.txt
[2025-06-03 21:16:05] -rw-------. 1 boinc boinc   1210969 Jun  3 20:46 log.45006595._014134.job.log.1
[2025-06-03 21:16:05] -rw-------. 1 boinc boinc       357 Jun  3 20:46 output.list
[2025-06-03 21:16:05] -rw-r--r--. 1 boinc boinc       620 Jun  3 20:46 runtime_log
[2025-06-03 21:16:05] -rw-------. 1 boinc boinc   1607680 Jun  3 20:46 result.tar.gz
[2025-06-03 21:16:05] -rw-------. 1 boinc boinc       656 Jun  3 20:46 YDINDmMZTg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmq6gKDmYltfyn.diag
[2025-06-03 21:16:05] -rw-r--r--. 1 boinc boinc      8659 Jun  3 20:46 runtime_log.err
[2025-06-03 21:16:05] -rw-r--r--. 1 boinc boinc      8192 Jun  3 21:16 boinc_mmap_file
[2025-06-03 21:16:05] -rw-r--r--. 1 boinc boinc        28 Jun  3 21:16 wrapper_checkpoint.txt
[2025-06-03 21:16:05] -rw-r--r--. 1 boinc boinc     20511 Jun  3 21:16 stderr.txt
[2025-06-03 21:16:05] HITS file was successfully produced:
[2025-06-03 21:16:05] -rw-------. 1 boinc boinc 176402366 Jun  3 20:44 shared/HITS.pool.root.1
[2025-06-03 21:16:05]  *** Contents of shared directory: ***
[2025-06-03 21:16:05] total 381748
[2025-06-03 21:16:05] -rw-r--r--. 2 boinc boinc 212368146 Jun  3 16:20 ATLAS.root_0
[2025-06-03 21:16:05] -rw-r--r--. 2 boinc boinc     15093 Jun  3 16:20 start_atlas.sh
[2025-06-03 21:16:05] -rw-r--r--. 2 boinc boinc    508876 Jun  3 16:20 input.tar.gz
[2025-06-03 21:16:05] -rw-------. 1 boinc boinc 176402366 Jun  3 20:44 HITS.pool.root.1
[2025-06-03 21:16:05] -rw-------. 1 boinc boinc   1607680 Jun  3 20:46 result.tar.gz
21:16:06 (1890): run_atlas exited; CPU time 47913.007138
21:16:06 (1890): called boinc_finish(0)

</stderr_txt>
]]>

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