Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:35:56 (26566): wrapper (7.7.26015): starting
17:35:56 (26566): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 17:35:56] Arguments: --nthreads 8
[2025-06-03 17:35:56] Threads: 8
[2025-06-03 17:35:56] Checking for CVMFS
[2025-06-03 17:35:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 17:35:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 17:35:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 17:35:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 17:35:58] 2.11.2.0 15047 31965 93128 146746 2 167 13856048 25165824 4377 130560 0 17426934 99.815 19064426 2068 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 17:35:58] CVMFS is ok
[2025-06-03 17:35:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:35:58] Checking for apptainer binary...
[2025-06-03 17:35:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 17:35:58] Running /usr/bin/apptainer --version
[2025-06-03 17:35:58] apptainer version 1.3.2-1.el7
[2025-06-03 17:35:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:36:00] cg-vwn358.simple-grid.lan
[2025-06-03 17:36:00] apptainer works
[2025-06-03 17:36:00] Set ATHENA_PROC_NUMBER=8
[2025-06-03 17:36:00] Set ATHENA_CORE_NUMBER=8
[2025-06-03 17:36:00] Starting ATLAS job with PandaID=6677442292
[2025-06-03 17:36:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:43:46]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:43:46] 2025-06-03 19:15:15,966 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:43:46] 2025-06-03 19:15:15,966 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:43:46] 2025-06-03 19:15:15,967 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:43:46] 2025-06-03 19:15:15,967 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:43:46] 2025-06-03 19:15:15,972 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:43:46] 2025-06-03 19:15:15,972 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 21:43:46] 2025-06-03 19:15:15,974 | INFO     | sum of deviations: -35283218558.99999
[2025-06-03 21:43:46] 2025-06-03 19:15:15,974 | INFO     | mean x: 1748971506.0
[2025-06-03 21:43:46] 2025-06-03 19:15:15,974 | INFO     | mean y: 2518858.544600939
[2025-06-03 21:43:46] 2025-06-03 19:15:15,975 | INFO     | -- intersect: 20596640199.420948
[2025-06-03 21:43:46] 2025-06-03 19:15:15,975 | INFO     | intersect: 20596640199.420948
[2025-06-03 21:43:46] 2025-06-03 19:15:15,975 | INFO     | chi2: 2.9771145222088515
[2025-06-03 21:43:46] 2025-06-03 19:15:15,976 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 21:43:46] 2025-06-03 19:15:15,978 | INFO     | sum of deviations: -19187615483.5
[2025-06-03 21:43:46] 2025-06-03 19:15:15,978 | INFO     | mean x: 1748971353.5
[2025-06-03 21:43:46] 2025-06-03 19:15:15,979 | INFO     | mean y: 2530557.8798076925
[2025-06-03 21:43:46] 2025-06-03 19:15:15,979 | INFO     | -- intersect: 12029198283.588003
[2025-06-03 21:43:46] 2025-06-03 19:15:15,979 | INFO     | intersect: 12029198283.588003
[2025-06-03 21:43:46] 2025-06-03 19:15:15,979 | INFO     | chi2: 2.113408154109636
[2025-06-03 21:43:46] 2025-06-03 19:15:15,979 | INFO     | current chi2=2.113408154109636 (change=29.011526484993734 %)
[2025-06-03 21:43:46] 2025-06-03 19:15:15,980 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 21:43:46] 2025-06-03 19:15:15,981 | INFO     | sum of deviations: -18280939208.000008
[2025-06-03 21:43:46] 2025-06-03 19:15:15,982 | INFO     | mean x: 1748971201.0
[2025-06-03 21:43:46] 2025-06-03 19:15:15,982 | INFO     | mean y: 2531261.9310344825
[2025-06-03 21:43:46] 2025-06-03 19:15:15,982 | INFO     | -- intersect: 12328616424.783495
[2025-06-03 21:43:46] 2025-06-03 19:15:15,982 | INFO     | intersect: 12328616424.783495
[2025-06-03 21:43:46] 2025-06-03 19:15:15,982 | INFO     | chi2: 2.1121704427010513
[2025-06-03 21:43:46] 2025-06-03 19:15:15,983 | INFO     | current chi2=2.1121704427010513 (change=0.05856471246114218 %)
[2025-06-03 21:43:46] 2025-06-03 19:15:15,983 | INFO     | right removable region: 202
[2025-06-03 21:43:46] 2025-06-03 19:15:15,983 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 21:43:46] 2025-06-03 19:15:15,985 | INFO     | sum of deviations: -76386329845.5
[2025-06-03 21:43:46] 2025-06-03 19:15:15,985 | INFO     | mean x: 1748971658.5
[2025-06-03 21:43:46] 2025-06-03 19:15:15,985 | INFO     | mean y: 2549034.5625
[2025-06-03 21:43:46] 2025-06-03 19:15:15,986 | INFO     | -- intersect: 47880992754.36291
[2025-06-03 21:43:46] 2025-06-03 19:15:15,986 | INFO     | intersect: 47880992754.36291
[2025-06-03 21:43:46] 2025-06-03 19:15:15,986 | INFO     | chi2: 1.1185812990626793
[2025-06-03 21:43:46] 2025-06-03 19:15:15,986 | INFO     | current chi2=1.1185812990626793 (change=62.42733389265943 %)
[2025-06-03 21:43:46] 2025-06-03 19:15:15,987 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 21:43:46] 2025-06-03 19:15:15,988 | INFO     | sum of deviations: -73837532227.99998
[2025-06-03 21:43:46] 2025-06-03 19:15:15,989 | INFO     | mean x: 1748971811.0
[2025-06-03 21:43:46] 2025-06-03 19:15:15,989 | INFO     | mean y: 2547021.9556650245
[2025-06-03 21:43:46] 2025-06-03 19:15:15,989 | INFO     | -- intersect: 49788174419.5915
[2025-06-03 21:43:46] 2025-06-03 19:15:15,989 | INFO     | intersect: 49788174419.5915
[2025-06-03 21:43:46] 2025-06-03 19:15:15,989 | INFO     | chi2: 1.1068447732347644
[2025-06-03 21:43:46] 2025-06-03 19:15:15,990 | INFO     | current chi2=1.1068447732347644 (change=1.0492331525432828 %)
[2025-06-03 21:43:46] 2025-06-03 19:15:15,990 | INFO     | left removable region: 20
[2025-06-03 21:43:46] 2025-06-03 19:15:15,990 | INFO     | sum of square deviations: 1869302025.5
[2025-06-03 21:43:46] 2025-06-03 19:15:15,992 | INFO     | sum of deviations: -44658182471.99998
[2025-06-03 21:43:46] 2025-06-03 19:15:15,992 | INFO     | mean x: 1748971780.5
[2025-06-03 21:43:46] 2025-06-03 19:15:15,992 | INFO     | mean y: 2551641.5384615385
[2025-06-03 21:43:46] 2025-06-03 19:15:15,992 | INFO     | -- intersect: 41786008700.09269
[2025-06-03 21:43:46] 2025-06-03 19:15:15,992 | INFO     | intersect: 41786008700.09269
[2025-06-03 21:43:46] 2025-06-03 19:15:15,993 | INFO     | chi2: 0.1947498522775426
[2025-06-03 21:43:46] 2025-06-03 19:15:15,993 | INFO     | -- intersect: 41786008700.09269
[2025-06-03 21:43:46] 2025-06-03 19:15:15,993 | INFO     | current memory leak: -23.89 B/s (using 182 data points, chi2=0.19)
[2025-06-03 21:43:46] 2025-06-03 19:15:15,994 | INFO     | ..............................
[2025-06-03 21:43:46] 2025-06-03 19:15:15,994 | INFO     | . Timing measurements:
[2025-06-03 21:43:46] 2025-06-03 19:15:15,994 | INFO     | . get job = 0 s
[2025-06-03 21:43:46] 2025-06-03 19:15:15,994 | INFO     | . initial setup = 4 s
[2025-06-03 21:43:46] 2025-06-03 19:15:15,995 | INFO     | . payload setup = 12 s
[2025-06-03 21:43:46] 2025-06-03 19:15:15,995 | INFO     | . stage-in = 0 s
[2025-06-03 21:43:46] 2025-06-03 19:15:15,995 | INFO     | . payload execution = 13002 s
[2025-06-03 21:43:46] 2025-06-03 19:15:15,995 | INFO     | . stage-out = 4 s
[2025-06-03 21:43:46] 2025-06-03 19:15:15,995 | INFO     | . log creation = 1 s
[2025-06-03 21:43:46] 2025-06-03 19:15:15,995 | INFO     | ..............................
[2025-06-03 21:43:46] 2025-06-03 19:15:16,126 | INFO     | 
[2025-06-03 21:43:46] 2025-06-03 19:15:16,127 | INFO     | job summary report
[2025-06-03 21:43:46] 2025-06-03 19:15:16,127 | INFO     | --------------------------------------------------
[2025-06-03 21:43:46] 2025-06-03 19:15:16,127 | INFO     | PanDA job id: 6677442292
[2025-06-03 21:43:46] 2025-06-03 19:15:16,127 | INFO     | task id: 45006595
[2025-06-03 21:43:46] 2025-06-03 19:15:16,127 | INFO     | errors: (none)
[2025-06-03 21:43:46] 2025-06-03 19:15:16,127 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:43:46] 2025-06-03 19:15:16,127 | INFO     | pilot state: finished 
[2025-06-03 21:43:46] 2025-06-03 19:15:16,127 | INFO     | transexitcode: 0
[2025-06-03 21:43:46] 2025-06-03 19:15:16,128 | INFO     | exeerrorcode: 0
[2025-06-03 21:43:46] 2025-06-03 19:15:16,128 | INFO     | exeerrordiag: 
[2025-06-03 21:43:46] 2025-06-03 19:15:16,128 | INFO     | exitcode: 0
[2025-06-03 21:43:46] 2025-06-03 19:15:16,128 | INFO     | exitmsg: OK
[2025-06-03 21:43:46] 2025-06-03 19:15:16,128 | INFO     | cpuconsumptiontime: 48929 s
[2025-06-03 21:43:46] 2025-06-03 19:15:16,128 | INFO     | nevents: 400
[2025-06-03 21:43:46] 2025-06-03 19:15:16,128 | INFO     | neventsw: 0
[2025-06-03 21:43:46] 2025-06-03 19:15:16,128 | INFO     | pid: 8416
[2025-06-03 21:43:46] 2025-06-03 19:15:16,128 | INFO     | pgrp: 8416
[2025-06-03 21:43:46] 2025-06-03 19:15:16,128 | INFO     | corecount: 8
[2025-06-03 21:43:46] 2025-06-03 19:15:16,129 | INFO     | event service: False
[2025-06-03 21:43:46] 2025-06-03 19:15:16,129 | INFO     | sizes: {0: 2404955, 1: 2405210, 2: 2405210, 11: 2405444, 12: 2405472, 13019: 2434994, 13020: 2435121, 13024: 2444118, 13025: 2444174, 13110: 2444344}
[2025-06-03 21:43:46] 2025-06-03 19:15:16,129 | INFO     | --------------------------------------------------
[2025-06-03 21:43:46] 2025-06-03 19:15:16,129 | INFO     | 
[2025-06-03 21:43:46] 2025-06-03 19:15:16,129 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-03 21:43:46] 2025-06-03 19:15:16,547 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:43:46] 2025-06-03 19:15:16,547 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:43:46] 2025-06-03 19:15:16,547 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:43:46] 2025-06-03 19:15:16,548 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:43:46] 2025-06-03 19:15:16,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:43:46] 2025-06-03 19:15:16,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:43:46] 2025-06-03 19:15:16,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:43:46] 2025-06-03 19:15:16,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:43:46] 2025-06-03 19:15:16,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:43:46] 2025-06-03 19:15:16,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:43:46] 2025-06-03 19:15:16,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:43:46] 2025-06-03 19:15:16,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:43:46] 2025-06-03 19:15:16,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:43:46] 2025-06-03 19:15:16,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:43:46] 2025-06-03 19:15:16,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:43:46] 2025-06-03 19:15:16,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:43:46] 2025-06-03 19:15:16,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:43:46] 2025-06-03 19:15:16,549 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:43:46] 2025-06-03 19:15:16,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:43:46] 2025-06-03 19:15:16,549 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:43:46] 2025-06-03 19:15:16,549 | INFO     | job 6677442292 has completed (purged errors)
[2025-06-03 21:43:46] 2025-06-03 19:15:16,549 | INFO     | overall cleanup function is called
[2025-06-03 21:43:46] 2025-06-03 19:15:17,558 | INFO     | --- collectZombieJob: --- 10, [8416]
[2025-06-03 21:43:46] 2025-06-03 19:15:17,559 | INFO     | zombie collector waiting for pid 8416
[2025-06-03 21:43:46] 2025-06-03 19:15:17,559 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:43:46] 2025-06-03 19:15:17,559 | INFO     | collected zombie processes
[2025-06-03 21:43:46] 2025-06-03 19:15:17,559 | INFO     | will attempt to kill all subprocesses of pid=8416
[2025-06-03 21:43:46] 2025-06-03 19:15:17,703 | INFO     | process IDs to be killed: [8416] (in reverse order)
[2025-06-03 21:43:46] 2025-06-03 19:15:18,669 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:43:46] 2025-06-03 19:15:18,669 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:43:46] 2025-06-03 19:15:18,673 | INFO     | did not find any defunct processes belonging to 8416
[2025-06-03 21:43:46] 2025-06-03 19:15:18,676 | INFO     | did not find any defunct processes belonging to 8416
[2025-06-03 21:43:46] 2025-06-03 19:15:18,676 | INFO     | ready for new job
[2025-06-03 21:43:46] 2025-06-03 19:15:18,677 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:43:46] 2025-06-03 19:15:18,678 | INFO     | **************************************
[2025-06-03 21:43:46] 2025-06-03 19:15:18,679 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:43:46] 2025-06-03 19:15:18,679 | INFO     | **************************************
[2025-06-03 21:43:46] 2025-06-03 19:15:18,679 | INFO     | 
[2025-06-03 21:43:46] 2025-06-03 19:15:18,683 | INFO     | pilot is running in a VM
[2025-06-03 21:43:46] 2025-06-03 19:15:18,683 | INFO     | architecture information:
[2025-06-03 21:43:46] 2025-06-03 19:15:18,699 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:43:46] 2025-06-03 19:15:18,951 | INFO     | cat /etc/os-release:
[2025-06-03 21:43:46] NAME="CentOS Linux"
[2025-06-03 21:43:46] VERSION="7 (Core)"
[2025-06-03 21:43:46] ID="centos"
[2025-06-03 21:43:46] ID_LIKE="rhel fedora"
[2025-06-03 21:43:46] VERSION_ID="7"
[2025-06-03 21:43:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:43:46] ANSI_COLOR="0;31"
[2025-06-03 21:43:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:43:46] HOME_URL="https://www.centos.org/"
[2025-06-03 21:43:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:43:46] 
[2025-06-03 21:43:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:43:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:43:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:43:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:43:46] 
[2025-06-03 21:43:46] 2025-06-03 19:15:18,951 | INFO     | **************************************
[2025-06-03 21:43:46] 2025-06-03 19:15:19,455 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-03 21:43:46] 2025-06-03 19:15:19,772 | INFO     | sufficient remaining disk space (496641245184 B)
[2025-06-03 21:43:46] 2025-06-03 19:15:19,773 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:43:46] 2025-06-03 19:15:19,773 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:43:46] 2025-06-03 19:15:19,773 | INFO     | update_server=False
[2025-06-03 21:43:46] 2025-06-03 19:15:19,773 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:43:46] 2025-06-03 19:15:19,773 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:43:46] 2025-06-03 19:15:19,775 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 21:43:46] 2025-06-03 19:15:19,776 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:43:46] 2025-06-03 19:15:19,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:43:46] 2025-06-03 19:15:19,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:43:46] 2025-06-03 19:15:19,885 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:43:46] 2025-06-03 19:15:19,886 | INFO     | aborting loop
[2025-06-03 21:43:46] 2025-06-03 19:15:20,037 | INFO     | all payload control threads have been joined
[2025-06-03 21:43:46] 2025-06-03 19:15:20,141 | INFO     | all data control threads have been joined
[2025-06-03 21:43:46] 2025-06-03 19:15:20,780 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:43:46] 2025-06-03 19:15:20,823 | INFO     | all job control threads have been joined
[2025-06-03 21:43:46] 2025-06-03 19:15:20,892 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:43:46] 2025-06-03 19:15:20,967 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:43:46] 2025-06-03 19:15:21,000 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:43:46] 2025-06-03 19:15:21,044 | INFO     | [payload] control thread has finished
[2025-06-03 21:43:46] 2025-06-03 19:15:21,140 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:43:46] 2025-06-03 19:15:21,148 | INFO     | [data] control thread has finished
[2025-06-03 21:43:46] 2025-06-03 19:15:21,332 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:43:46] 2025-06-03 19:15:21,672 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:43:46] 2025-06-03 19:15:21,770 | INFO     | [job] validate thread has finished
[2025-06-03 21:43:46] 2025-06-03 19:15:21,780 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:43:46] 2025-06-03 19:15:21,829 | INFO     | [job] control thread has finished
[2025-06-03 21:43:46] 2025-06-03 19:15:22,020 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:43:46] 2025-06-03 19:15:22,132 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:43:46] 2025-06-03 19:15:22,145 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:43:46] 2025-06-03 19:15:22,823 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:43:46] 2025-06-03 19:15:26,831 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:43:46] 2025-06-03 19:15:30,633 | INFO     | job.realtimelogging is not enabled
[2025-06-03 21:43:46] 2025-06-03 19:15:31,639 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:43:46] 2025-06-03 19:15:32,845 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140354667349824)>', '<ExcThread(monitor, started 140354078627584)>']
[2025-06-03 21:43:46] 2025-06-03 19:15:32,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:43:46] 2025-06-03 19:15:32,853 | INFO     | [monitor] control thread has ended
[2025-06-03 21:43:46] 2025-06-03 19:15:37,870 | INFO     | all workflow threads have been joined
[2025-06-03 21:43:46] 2025-06-03 19:15:37,871 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:43:46] 2025-06-03 19:15:37,871 | INFO     | traces error code: 0
[2025-06-03 21:43:46] 2025-06-03 19:15:37,871 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:43:46] 2025-06-03 19:15:38,212 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:43:46] 2025-06-03 19:15:38,338 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:43:46] 2025-06-03 19:15:38,437 [wrapper] pilotpid: 30306
[2025-06-03 21:43:46] 2025-06-03 19:15:38,565 [wrapper] Pilot exit status: 0
[2025-06-03 21:43:46] 2025-06-03 19:15:39,004 [wrapper] pandaids: 6677442292
[2025-06-03 21:43:46] 2025-06-03 19:15:39,724 [wrapper] cleanup supervisor_pilot 12946 30307
[2025-06-03 21:43:46] 2025-06-03 19:15:39,806 [wrapper] Test setup, not cleaning
[2025-06-03 21:43:46] 2025-06-03 19:15:39,938 [wrapper] apfmon messages muted
[2025-06-03 21:43:46] 2025-06-03 19:15:40,034 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:43:46] 2025-06-03 19:15:40,133 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:43:46]  *** Error codes and diagnostics ***
[2025-06-03 21:43:46]     "exeErrorCode": 0,
[2025-06-03 21:43:46]     "exeErrorDiag": "",
[2025-06-03 21:43:46]     "pilotErrorCode": 0,
[2025-06-03 21:43:46]     "pilotErrorDiag": "",
[2025-06-03 21:43:46]  *** Listing of results directory ***
[2025-06-03 21:43:46] total 390352
[2025-06-03 21:43:46] -rw-r--r--. 1 boinc boinc    495897 Jun  3 03:24 pilot3.tar.gz
[2025-06-03 21:43:46] -rwx------. 1 boinc boinc     37140 Jun  3 03:34 runpilot2-wrapper.sh
[2025-06-03 21:43:46] -rw-r--r--. 1 boinc boinc      5111 Jun  3 03:34 queuedata.json
[2025-06-03 21:43:46] -rw-r--r--. 1 boinc boinc       100 Jun  3 17:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:43:46] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 17:35 run_atlas
[2025-06-03 21:43:46] -rw-r--r--. 1 boinc boinc       105 Jun  3 17:35 job.xml
[2025-06-03 21:43:46] -rw-r--r--. 1 boinc boinc      6392 Jun  3 17:35 init_data.xml
[2025-06-03 21:43:46] -rw-r--r--. 2 boinc boinc 215623647 Jun  3 17:35 EVNT.45006593._000654.pool.root.1
[2025-06-03 21:43:46] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:35 start_atlas.sh
[2025-06-03 21:43:46] drwxrwx--x. 2 boinc boinc        68 Jun  3 17:35 shared
[2025-06-03 21:43:46] -rw-r--r--. 2 boinc boinc    508879 Jun  3 17:35 input.tar.gz
[2025-06-03 21:43:46] -rw-r--r--. 1 boinc boinc         0 Jun  3 17:35 boinc_lockfile
[2025-06-03 21:43:46] -rw-r--r--. 1 boinc boinc      2524 Jun  3 17:36 pandaJob.out
[2025-06-03 21:43:46] -rw-------. 1 boinc boinc    982716 Jun  3 17:36 agis_schedconf.cvmfs.json
[2025-06-03 21:43:46] drwx------. 4 boinc boinc      4096 Jun  3 17:36 pilot3
[2025-06-03 21:43:46] -rw-------. 1 boinc boinc 177225240 Jun  3 21:12 HITS.45006595._016347.pool.root.1
[2025-06-03 21:43:46] -rw-r--r--. 1 boinc boinc       531 Jun  3 21:12 boinc_task_state.xml
[2025-06-03 21:43:46] -rw-------. 1 boinc boinc      1020 Jun  3 21:13 memory_monitor_summary.json
[2025-06-03 21:43:46] -rw-------. 1 boinc boinc   1603667 Jun  3 21:13 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:43:46] -rw-------. 1 boinc boinc    385141 Jun  3 21:13 log.45006595._016347.job.log.tgz.1
[2025-06-03 21:43:46] -rw-------. 1 boinc boinc        95 Jun  3 21:14 pilot_heartbeat.json
[2025-06-03 21:43:46] -rw-------. 1 boinc boinc      7692 Jun  3 21:15 heartbeat.json
[2025-06-03 21:43:46] -rw-------. 1 boinc boinc      4611 Jun  3 21:15 pilotlog.txt
[2025-06-03 21:43:46] -rw-------. 1 boinc boinc   1139795 Jun  3 21:15 log.45006595._016347.job.log.1
[2025-06-03 21:43:46] -rw-------. 1 boinc boinc       357 Jun  3 21:15 output.list
[2025-06-03 21:43:46] -rw-r--r--. 1 boinc boinc       620 Jun  3 21:15 runtime_log
[2025-06-03 21:43:46] -rw-------. 1 boinc boinc   1546240 Jun  3 21:15 result.tar.gz
[2025-06-03 21:43:46] -rw-r--r--. 1 boinc boinc      8659 Jun  3 21:15 runtime_log.err
[2025-06-03 21:43:46] -rw-------. 1 boinc boinc       656 Jun  3 21:15 Q6KODmkiVg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmW7WKDmjEEhtn.diag
[2025-06-03 21:43:46] -rw-r--r--. 1 boinc boinc      8192 Jun  3 21:43 boinc_mmap_file
[2025-06-03 21:43:46] -rw-r--r--. 1 boinc boinc        28 Jun  3 21:43 wrapper_checkpoint.txt
[2025-06-03 21:43:46] -rw-r--r--. 1 boinc boinc     20481 Jun  3 21:43 stderr.txt
[2025-06-03 21:43:46] HITS file was successfully produced:
[2025-06-03 21:43:46] -rw-------. 1 boinc boinc 177225240 Jun  3 21:12 shared/HITS.pool.root.1
[2025-06-03 21:43:46]  *** Contents of shared directory: ***
[2025-06-03 21:43:46] total 385672
[2025-06-03 21:43:46] -rw-r--r--. 2 boinc boinc 215623647 Jun  3 17:35 ATLAS.root_0
[2025-06-03 21:43:46] -rw-r--r--. 2 boinc boinc     15093 Jun  3 17:35 start_atlas.sh
[2025-06-03 21:43:46] -rw-r--r--. 2 boinc boinc    508879 Jun  3 17:35 input.tar.gz
[2025-06-03 21:43:46] -rw-------. 1 boinc boinc 177225240 Jun  3 21:12 HITS.pool.root.1
[2025-06-03 21:43:46] -rw-------. 1 boinc boinc   1546240 Jun  3 21:15 result.tar.gz
21:43:48 (26566): run_atlas exited; CPU time 49101.009942
21:43:48 (26566): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN