Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:47:01 (3371): wrapper (7.7.26015): starting
11:47:01 (3371): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:47:01] Arguments: --nthreads 8
[2025-06-03 11:47:01] Threads: 8
[2025-06-03 11:47:01] Checking for CVMFS
[2025-06-03 11:47:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:47:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:47:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:47:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:47:03] 2.11.2.0 4192 31788 91880 146737 1 16 24495674 25165825 4638 130560 0 15683956 99.835 16545701 2008 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 11:47:03] CVMFS is ok
[2025-06-03 11:47:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:47:03] Checking for apptainer binary...
[2025-06-03 11:47:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:47:03] Running /usr/bin/apptainer --version
[2025-06-03 11:47:03] apptainer version 1.3.2-1.el7
[2025-06-03 11:47:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:47:24] cg-vwn295.simple-grid.lan
[2025-06-03 11:47:24] apptainer works
[2025-06-03 11:47:24] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:47:24] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:47:24] Starting ATLAS job with PandaID=6666805381
[2025-06-03 11:47:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:25:41]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:25:41] 2025-06-03 15:17:31,519 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6666805381/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 17:25:41] 2025-06-03 15:17:31,520 | INFO     | extracted standard info from prmon json
[2025-06-03 17:25:41] 2025-06-03 15:17:31,520 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:25:41] 2025-06-03 15:17:31,520 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:25:41] 2025-06-03 15:17:31,520 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:25:41] 2025-06-03 15:17:31,520 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:25:41] 2025-06-03 15:17:31,527 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:25:41] 2025-06-03 15:17:31,527 | INFO     | sum of square deviations: 9237596457.5
[2025-06-03 17:25:41] 2025-06-03 15:17:31,531 | INFO     | sum of deviations: 38941696395.5001
[2025-06-03 17:25:41] 2025-06-03 15:17:31,531 | INFO     | mean x: 1748954186.5
[2025-06-03 17:25:41] 2025-06-03 15:17:31,531 | INFO     | mean y: 2497930.248387097
[2025-06-03 17:25:41] 2025-06-03 15:17:31,531 | INFO     | -- intersect: -7370333655.723917
[2025-06-03 17:25:41] 2025-06-03 15:17:31,531 | INFO     | intersect: -7370333655.723917
[2025-06-03 17:25:41] 2025-06-03 15:17:31,532 | INFO     | chi2: 7.791020147151561
[2025-06-03 17:25:41] 2025-06-03 15:17:31,532 | INFO     | sum of square deviations: 8797783560.0
[2025-06-03 17:25:41] 2025-06-03 15:17:31,535 | INFO     | sum of deviations: 60090935116.9999
[2025-06-03 17:25:41] 2025-06-03 15:17:31,536 | INFO     | mean x: 1748954034.0
[2025-06-03 17:25:41] 2025-06-03 15:17:31,536 | INFO     | mean y: 2505166.668852459
[2025-06-03 17:25:41] 2025-06-03 15:17:31,536 | INFO     | -- intersect: -11943263067.223598
[2025-06-03 17:25:41] 2025-06-03 15:17:31,540 | INFO     | intersect: -11943263067.223598
[2025-06-03 17:25:41] 2025-06-03 15:17:31,541 | INFO     | chi2: 7.021159556599442
[2025-06-03 17:25:41] 2025-06-03 15:17:31,541 | INFO     | current chi2=7.021159556599442 (change=9.881383644394553 %)
[2025-06-03 17:25:41] 2025-06-03 15:17:31,541 | INFO     | right removable region: 304
[2025-06-03 17:25:41] 2025-06-03 15:17:31,542 | INFO     | sum of square deviations: 8797783560.0
[2025-06-03 17:25:41] 2025-06-03 15:17:31,545 | INFO     | sum of deviations: -71945290512.0
[2025-06-03 17:25:41] 2025-06-03 15:17:31,545 | INFO     | mean x: 1748954339.0
[2025-06-03 17:25:41] 2025-06-03 15:17:31,545 | INFO     | mean y: 2536359.242622951
[2025-06-03 17:25:41] 2025-06-03 15:17:31,545 | INFO     | -- intersect: 14304891850.649817
[2025-06-03 17:25:41] 2025-06-03 15:17:31,545 | INFO     | intersect: 14304891850.649817
[2025-06-03 17:25:41] 2025-06-03 15:17:31,546 | INFO     | chi2: 2.8891267279130393
[2025-06-03 17:25:41] 2025-06-03 15:17:31,546 | INFO     | current chi2=2.8891267279130393 (change=62.917221707232784 %)
[2025-06-03 17:25:41] 2025-06-03 15:17:31,546 | INFO     | sum of square deviations: 8372156975.0
[2025-06-03 17:25:41] 2025-06-03 15:17:31,549 | INFO     | sum of deviations: -131776822824.0
[2025-06-03 17:25:41] 2025-06-03 15:17:31,549 | INFO     | mean x: 1748954491.5
[2025-06-03 17:25:41] 2025-06-03 15:17:31,550 | INFO     | mean y: 2557707.946666667
[2025-06-03 17:25:41] 2025-06-03 15:17:31,550 | INFO     | -- intersect: 27530907551.582333
[2025-06-03 17:25:41] 2025-06-03 15:17:31,550 | INFO     | intersect: 27530907551.582333
[2025-06-03 17:25:41] 2025-06-03 15:17:31,550 | INFO     | chi2: 1.201307862330817
[2025-06-03 17:25:41] 2025-06-03 15:17:31,550 | INFO     | current chi2=1.201307862330817 (change=58.419689564860946 %)
[2025-06-03 17:25:41] 2025-06-03 15:17:31,551 | INFO     | sum of square deviations: 7960484140.0
[2025-06-03 17:25:41] 2025-06-03 15:17:31,554 | INFO     | sum of deviations: -135056246264.0
[2025-06-03 17:25:41] 2025-06-03 15:17:31,554 | INFO     | mean x: 1748954644.0
[2025-06-03 17:25:41] 2025-06-03 15:17:31,554 | INFO     | mean y: 2558894.779661017
[2025-06-03 17:25:41] 2025-06-03 15:17:31,554 | INFO     | -- intersect: 29675031692.97689
[2025-06-03 17:25:41] 2025-06-03 15:17:31,554 | INFO     | intersect: 29675031692.97689
[2025-06-03 17:25:41] 2025-06-03 15:17:31,555 | INFO     | chi2: 1.1495820132889631
[2025-06-03 17:25:41] 2025-06-03 15:17:31,555 | INFO     | current chi2=1.1495820132889631 (change=4.305794598022006 %)
[2025-06-03 17:25:41] 2025-06-03 15:17:31,555 | INFO     | left removable region: 30
[2025-06-03 17:25:41] 2025-06-03 15:17:31,556 | INFO     | sum of square deviations: 6378584712.5
[2025-06-03 17:25:41] 2025-06-03 15:17:31,562 | INFO     | sum of deviations: -88285292283.49998
[2025-06-03 17:25:41] 2025-06-03 15:17:31,563 | INFO     | mean x: 1748954918.5
[2025-06-03 17:25:41] 2025-06-03 15:17:31,563 | INFO     | mean y: 2557993.9744525547
[2025-06-03 17:25:41] 2025-06-03 15:17:31,563 | INFO     | -- intersect: 24209651437.10906
[2025-06-03 17:25:41] 2025-06-03 15:17:31,563 | INFO     | intersect: 24209651437.10906
[2025-06-03 17:25:41] 2025-06-03 15:17:31,563 | INFO     | chi2: 0.29146611412551837
[2025-06-03 17:25:41] 2025-06-03 15:17:31,564 | INFO     | -- intersect: 24209651437.10906
[2025-06-03 17:25:41] 2025-06-03 15:17:31,564 | INFO     | current memory leak: -13.84 B/s (using 274 data points, chi2=0.29)
[2025-06-03 17:25:41] 2025-06-03 15:17:31,565 | INFO     | ..............................
[2025-06-03 17:25:41] 2025-06-03 15:17:31,565 | INFO     | . Timing measurements:
[2025-06-03 17:25:41] 2025-06-03 15:17:31,565 | INFO     | . get job = 0 s
[2025-06-03 17:25:41] 2025-06-03 15:17:31,565 | INFO     | . initial setup = 10 s
[2025-06-03 17:25:41] 2025-06-03 15:17:31,565 | INFO     | . payload setup = 175 s
[2025-06-03 17:25:41] 2025-06-03 15:17:31,565 | INFO     | . stage-in = 0 s
[2025-06-03 17:25:41] 2025-06-03 15:17:31,565 | INFO     | . payload execution = 19062 s
[2025-06-03 17:25:41] 2025-06-03 15:17:31,565 | INFO     | . stage-out = 94 s
[2025-06-03 17:25:41] 2025-06-03 15:17:31,565 | INFO     | . log creation = 91 s
[2025-06-03 17:25:41] 2025-06-03 15:17:31,566 | INFO     | ..............................
[2025-06-03 17:25:41] 2025-06-03 15:17:31,951 | INFO     | 
[2025-06-03 17:25:41] 2025-06-03 15:17:31,951 | INFO     | job summary report
[2025-06-03 17:25:41] 2025-06-03 15:17:31,952 | INFO     | --------------------------------------------------
[2025-06-03 17:25:41] 2025-06-03 15:17:31,952 | INFO     | PanDA job id: 6666805381
[2025-06-03 17:25:41] 2025-06-03 15:17:31,952 | INFO     | task id: 44871837
[2025-06-03 17:25:41] 2025-06-03 15:17:31,952 | INFO     | errors: (none)
[2025-06-03 17:25:41] 2025-06-03 15:17:31,952 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:25:41] 2025-06-03 15:17:31,952 | INFO     | pilot state: finished 
[2025-06-03 17:25:41] 2025-06-03 15:17:31,952 | INFO     | transexitcode: 0
[2025-06-03 17:25:41] 2025-06-03 15:17:31,952 | INFO     | exeerrorcode: 0
[2025-06-03 17:25:41] 2025-06-03 15:17:31,953 | INFO     | exeerrordiag: 
[2025-06-03 17:25:41] 2025-06-03 15:17:31,953 | INFO     | exitcode: 0
[2025-06-03 17:25:41] 2025-06-03 15:17:31,953 | INFO     | exitmsg: OK
[2025-06-03 17:25:41] 2025-06-03 15:17:31,953 | INFO     | cpuconsumptiontime: 71349 s
[2025-06-03 17:25:41] 2025-06-03 15:17:31,953 | INFO     | nevents: 400
[2025-06-03 17:25:41] 2025-06-03 15:17:31,953 | INFO     | neventsw: 0
[2025-06-03 17:25:41] 2025-06-03 15:17:31,953 | INFO     | pid: 18913
[2025-06-03 17:25:41] 2025-06-03 15:17:31,953 | INFO     | pgrp: 18913
[2025-06-03 17:25:41] 2025-06-03 15:17:31,953 | INFO     | corecount: 8
[2025-06-03 17:25:41] 2025-06-03 15:17:31,953 | INFO     | event service: False
[2025-06-03 17:25:41] 2025-06-03 15:17:31,953 | INFO     | sizes: {0: 2404406, 1: 2405092, 2: 2405291, 13: 2405291, 24: 2405347, 34: 2405375, 45: 2405531, 56: 2405559, 67: 2405587, 77: 2405615, 88: 2405671, 95: 2406185, 99
[2025-06-03 17:25:41] 2025-06-03 15:17:31,953 | INFO     | --------------------------------------------------
[2025-06-03 17:25:41] 2025-06-03 15:17:31,954 | INFO     | 
[2025-06-03 17:25:41] 2025-06-03 15:17:31,954 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-03 17:25:41] 2025-06-03 15:17:32,499 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:25:41] 2025-06-03 15:17:32,499 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:25:41] 2025-06-03 15:17:32,499 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:25:41] 2025-06-03 15:17:32,499 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:25:41] 2025-06-03 15:17:32,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:25:41] 2025-06-03 15:17:32,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:25:41] 2025-06-03 15:17:32,500 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:25:41] 2025-06-03 15:17:32,500 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:25:41] 2025-06-03 15:17:32,500 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:25:41] 2025-06-03 15:17:32,500 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:25:41] 2025-06-03 15:17:32,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:25:41] 2025-06-03 15:17:32,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:25:41] 2025-06-03 15:17:32,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:25:41] 2025-06-03 15:17:32,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:25:41] 2025-06-03 15:17:32,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:25:41] 2025-06-03 15:17:32,501 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:25:41] 2025-06-03 15:17:32,501 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:25:41] 2025-06-03 15:17:32,501 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:25:41] 2025-06-03 15:17:32,501 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:25:41] 2025-06-03 15:17:32,501 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:25:41] 2025-06-03 15:17:32,501 | INFO     | job 6666805381 has completed (purged errors)
[2025-06-03 17:25:41] 2025-06-03 15:17:32,501 | INFO     | overall cleanup function is called
[2025-06-03 17:25:41] 2025-06-03 15:17:33,511 | INFO     | --- collectZombieJob: --- 10, [18913]
[2025-06-03 17:25:41] 2025-06-03 15:17:33,511 | INFO     | zombie collector waiting for pid 18913
[2025-06-03 17:25:41] 2025-06-03 15:17:33,512 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:25:41] 2025-06-03 15:17:33,512 | INFO     | collected zombie processes
[2025-06-03 17:25:41] 2025-06-03 15:17:33,512 | INFO     | will attempt to kill all subprocesses of pid=18913
[2025-06-03 17:25:41] 2025-06-03 15:17:33,628 | INFO     | process IDs to be killed: [18913] (in reverse order)
[2025-06-03 17:25:41] 2025-06-03 15:17:34,260 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:25:41] 2025-06-03 15:17:34,260 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:25:41] 2025-06-03 15:17:34,263 | INFO     | did not find any defunct processes belonging to 18913
[2025-06-03 17:25:41] 2025-06-03 15:17:34,272 | INFO     | did not find any defunct processes belonging to 18913
[2025-06-03 17:25:41] 2025-06-03 15:17:34,272 | INFO     | ready for new job
[2025-06-03 17:25:41] 2025-06-03 15:17:34,273 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:25:41] 2025-06-03 15:17:34,275 | INFO     | **************************************
[2025-06-03 17:25:41] 2025-06-03 15:17:34,275 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:25:41] 2025-06-03 15:17:34,275 | INFO     | **************************************
[2025-06-03 17:25:41] 2025-06-03 15:17:34,275 | INFO     | 
[2025-06-03 17:25:41] 2025-06-03 15:17:34,276 | INFO     | pilot is running in a VM
[2025-06-03 17:25:41] 2025-06-03 15:17:34,276 | INFO     | architecture information:
[2025-06-03 17:25:41] 2025-06-03 15:17:34,281 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:25:41] 2025-06-03 15:17:34,462 | INFO     | cat /etc/os-release:
[2025-06-03 17:25:41] NAME="CentOS Linux"
[2025-06-03 17:25:41] VERSION="7 (Core)"
[2025-06-03 17:25:41] ID="centos"
[2025-06-03 17:25:41] ID_LIKE="rhel fedora"
[2025-06-03 17:25:41] VERSION_ID="7"
[2025-06-03 17:25:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:25:41] ANSI_COLOR="0;31"
[2025-06-03 17:25:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:25:41] HOME_URL="https://www.centos.org/"
[2025-06-03 17:25:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:25:41] 
[2025-06-03 17:25:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:25:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:25:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:25:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:25:41] 
[2025-06-03 17:25:41] 2025-06-03 15:17:34,463 | INFO     | **************************************
[2025-06-03 17:25:41] 2025-06-03 15:17:34,966 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-03 17:25:41] 2025-06-03 15:17:35,202 | INFO     | sufficient remaining disk space (496633905152 B)
[2025-06-03 17:25:41] 2025-06-03 15:17:35,202 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:25:41] 2025-06-03 15:17:35,202 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:25:41] 2025-06-03 15:17:35,202 | INFO     | update_server=False
[2025-06-03 17:25:41] 2025-06-03 15:17:35,202 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:25:41] 2025-06-03 15:17:35,203 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:25:41] 2025-06-03 15:17:35,203 | INFO     | aborting loop
[2025-06-03 17:25:41] 2025-06-03 15:17:35,682 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:25:41] 2025-06-03 15:17:35,683 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:25:41] 2025-06-03 15:17:35,683 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:25:41] 2025-06-03 15:17:35,963 | INFO     | all payload control threads have been joined
[2025-06-03 17:25:41] 2025-06-03 15:17:35,988 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:25:41] 2025-06-03 15:17:36,081 | INFO     | all data control threads have been joined
[2025-06-03 17:25:41] 2025-06-03 15:17:36,208 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:25:41] 2025-06-03 15:17:36,209 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:25:41] 2025-06-03 15:17:36,271 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:25:41] 2025-06-03 15:17:36,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:25:41] 2025-06-03 15:17:36,868 | INFO     | all job control threads have been joined
[2025-06-03 17:25:41] 2025-06-03 15:17:36,941 | INFO     | [job] validate thread has finished
[2025-06-03 17:25:41] 2025-06-03 15:17:36,969 | INFO     | [payload] control thread has finished
[2025-06-03 17:25:41] 2025-06-03 15:17:36,970 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:25:41] 2025-06-03 15:17:36,997 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:25:41] 2025-06-03 15:17:37,085 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:25:41] 2025-06-03 15:17:37,086 | INFO     | [data] control thread has finished
[2025-06-03 17:25:41] 2025-06-03 15:17:37,098 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:25:41] 2025-06-03 15:17:37,411 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:25:41] 2025-06-03 15:17:37,433 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:25:41] 2025-06-03 15:17:37,740 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:25:41] 2025-06-03 15:17:37,754 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:25:41] 2025-06-03 15:17:37,874 | INFO     | [job] control thread has finished
[2025-06-03 17:25:41] 2025-06-03 15:17:37,996 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:25:41] 2025-06-03 15:17:41,749 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:25:41] 2025-06-03 15:17:43,095 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140031679145792)>', '<ExcThread(monitor, started 140030630688512)>']
[2025-06-03 17:25:41] 2025-06-03 15:17:43,729 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:25:41] 2025-06-03 15:17:43,729 | INFO     | [monitor] control thread has ended
[2025-06-03 17:25:41] 2025-06-03 15:17:48,121 | INFO     | all workflow threads have been joined
[2025-06-03 17:25:41] 2025-06-03 15:17:48,121 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:25:41] 2025-06-03 15:17:48,122 | INFO     | traces error code: 0
[2025-06-03 17:25:41] 2025-06-03 15:17:48,122 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:25:41] 2025-06-03 15:17:48,405 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:25:41] 2025-06-03 15:17:48,444 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:25:41] 2025-06-03 15:17:48,527 [wrapper] pilotpid: 10360
[2025-06-03 17:25:41] 2025-06-03 15:17:48,625 [wrapper] Pilot exit status: 0
[2025-06-03 17:25:41] 2025-06-03 15:17:49,080 [wrapper] pandaids: 6666805381
[2025-06-03 17:25:41] 2025-06-03 15:17:50,039 [wrapper] cleanup supervisor_pilot  5031 10361
[2025-06-03 17:25:41] 2025-06-03 15:17:50,106 [wrapper] Test setup, not cleaning
[2025-06-03 17:25:41] 2025-06-03 15:17:50,216 [wrapper] apfmon messages muted
[2025-06-03 17:25:41] 2025-06-03 15:17:50,298 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:25:41] 2025-06-03 15:17:50,369 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:25:41]  *** Error codes and diagnostics ***
[2025-06-03 17:25:41]     "exeErrorCode": 0,
[2025-06-03 17:25:41]     "exeErrorDiag": "",
[2025-06-03 17:25:41]     "pilotErrorCode": 0,
[2025-06-03 17:25:41]     "pilotErrorDiag": "",
[2025-06-03 17:25:41]  *** Listing of results directory ***
[2025-06-03 17:25:41] total 422916
[2025-06-03 17:25:41] -rw-r--r--. 1 boinc boinc    495897 May 27 07:18 pilot3.tar.gz
[2025-06-03 17:25:41] -rwx------. 1 boinc boinc     37140 May 27 07:49 runpilot2-wrapper.sh
[2025-06-03 17:25:41] -rw-r--r--. 1 boinc boinc      5111 May 27 07:49 queuedata.json
[2025-06-03 17:25:41] -rw-r--r--. 1 boinc boinc       100 Jun  3 11:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:25:41] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 11:47 run_atlas
[2025-06-03 17:25:41] -rw-r--r--. 1 boinc boinc       105 Jun  3 11:47 job.xml
[2025-06-03 17:25:41] -rw-r--r--. 1 boinc boinc      6392 Jun  3 11:47 init_data.xml
[2025-06-03 17:25:41] -rw-r--r--. 2 boinc boinc 224098211 Jun  3 11:47 EVNT.44871834._002482.pool.root.1
[2025-06-03 17:25:41] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:47 start_atlas.sh
[2025-06-03 17:25:41] drwxrwx--x. 2 boinc boinc        68 Jun  3 11:47 shared
[2025-06-03 17:25:41] -rw-r--r--. 2 boinc boinc    508875 Jun  3 11:47 input.tar.gz
[2025-06-03 17:25:41] -rw-r--r--. 1 boinc boinc         0 Jun  3 11:47 boinc_lockfile
[2025-06-03 17:25:41] -rw-r--r--. 1 boinc boinc      2559 Jun  3 11:47 pandaJob.out
[2025-06-03 17:25:41] -rw-------. 1 boinc boinc    985490 Jun  3 11:50 agis_schedconf.cvmfs.json
[2025-06-03 17:25:41] drwx------. 4 boinc boinc      4096 Jun  3 11:50 pilot3
[2025-06-03 17:25:41] -rw-------. 1 boinc boinc 200968505 Jun  3 17:13 HITS.44871837._062948.pool.root.1
[2025-06-03 17:25:41] -rw-r--r--. 1 boinc boinc       530 Jun  3 17:13 boinc_task_state.xml
[2025-06-03 17:25:41] -rw-------. 1 boinc boinc      1018 Jun  3 17:14 memory_monitor_summary.json
[2025-06-03 17:25:41] -rw-------. 1 boinc boinc   1603667 Jun  3 17:14 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:25:41] -rw-------. 1 boinc boinc    431197 Jun  3 17:16 log.44871837._062948.job.log.tgz.1
[2025-06-03 17:25:41] -rw-------. 1 boinc boinc        95 Jun  3 17:17 pilot_heartbeat.json
[2025-06-03 17:25:41] -rw-------. 1 boinc boinc      7696 Jun  3 17:17 heartbeat.json
[2025-06-03 17:25:41] -rw-------. 1 boinc boinc      4417 Jun  3 17:17 pilotlog.txt
[2025-06-03 17:25:41] -rw-------. 1 boinc boinc   1654540 Jun  3 17:17 log.44871837._062948.job.log.1
[2025-06-03 17:25:41] -rw-------. 1 boinc boinc       357 Jun  3 17:17 output.list
[2025-06-03 17:25:41] -rw-r--r--. 1 boinc boinc       620 Jun  3 17:17 runtime_log
[2025-06-03 17:25:41] -rw-------. 1 boinc boinc   2109440 Jun  3 17:17 result.tar.gz
[2025-06-03 17:25:41] -rw-r--r--. 1 boinc boinc      8673 Jun  3 17:17 runtime_log.err
[2025-06-03 17:25:41] -rw-------. 1 boinc boinc       656 Jun  3 17:17 OnzMDmgM2d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfgYKDm1UiyVn.diag
[2025-06-03 17:25:41] -rw-r--r--. 1 boinc boinc      8192 Jun  3 17:25 boinc_mmap_file
[2025-06-03 17:25:41] -rw-r--r--. 1 boinc boinc        28 Jun  3 17:25 wrapper_checkpoint.txt
[2025-06-03 17:25:41] -rw-r--r--. 1 boinc boinc     20526 Jun  3 17:25 stderr.txt
[2025-06-03 17:25:41] HITS file was successfully produced:
[2025-06-03 17:25:41] -rw-------. 1 boinc boinc 200968505 Jun  3 17:13 shared/HITS.pool.root.1
[2025-06-03 17:25:41]  *** Contents of shared directory: ***
[2025-06-03 17:25:41] total 417684
[2025-06-03 17:25:41] -rw-r--r--. 2 boinc boinc 224098211 Jun  3 11:47 ATLAS.root_0
[2025-06-03 17:25:41] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:47 start_atlas.sh
[2025-06-03 17:25:41] -rw-r--r--. 2 boinc boinc    508875 Jun  3 11:47 input.tar.gz
[2025-06-03 17:25:41] -rw-------. 1 boinc boinc 200968505 Jun  3 17:13 HITS.pool.root.1
[2025-06-03 17:25:41] -rw-------. 1 boinc boinc   2109440 Jun  3 17:17 result.tar.gz
17:25:43 (3371): run_atlas exited; CPU time 71620.103686
17:25:43 (3371): called boinc_finish(0)

</stderr_txt>
]]>

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