Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:25:06 (9865): wrapper (7.7.26015): starting
13:25:06 (9865): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:25:06] Arguments: --nthreads 8
[2025-06-03 13:25:06] Threads: 8
[2025-06-03 13:25:06] Checking for CVMFS
[2025-06-03 13:25:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:25:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:25:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:25:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:25:08] 2.11.2.0 18352 31886 93160 146741 3 108 21699562 25165824 4360 130560 0 16816981 99.791 18904233 4380 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 13:25:08] CVMFS is ok
[2025-06-03 13:25:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:25:08] Checking for apptainer binary...
[2025-06-03 13:25:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:25:08] Running /usr/bin/apptainer --version
[2025-06-03 13:25:08] apptainer version 1.3.2-1.el7
[2025-06-03 13:25:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:25:10] cg-vwn313.simple-grid.lan
[2025-06-03 13:25:10] apptainer works
[2025-06-03 13:25:10] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:25:10] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:25:10] Starting ATLAS job with PandaID=6677441741
[2025-06-03 13:25:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:12:20]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:12:20] 2025-06-03 15:12:07,292 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:12:20] 2025-06-03 15:12:07,293 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:12:20] 2025-06-03 15:12:07,293 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:12:20] 2025-06-03 15:12:07,293 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:12:20] 2025-06-03 15:12:07,298 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:12:20] 2025-06-03 15:12:07,299 | INFO     | sum of square deviations: 3392567795.5
[2025-06-03 17:12:20] 2025-06-03 15:12:07,301 | INFO     | sum of deviations: -63743456761.0
[2025-06-03 17:12:20] 2025-06-03 15:12:07,310 | INFO     | mean x: 1748956736.5
[2025-06-03 17:12:20] 2025-06-03 15:12:07,310 | INFO     | mean y: 2597907.3513513515
[2025-06-03 17:12:20] 2025-06-03 15:12:07,310 | INFO     | -- intersect: 32864004025.107864
[2025-06-03 17:12:20] 2025-06-03 15:12:07,310 | INFO     | intersect: 32864004025.107864
[2025-06-03 17:12:20] 2025-06-03 15:12:07,311 | INFO     | chi2: 2.7365762978543215
[2025-06-03 17:12:20] 2025-06-03 15:12:07,311 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 17:12:20] 2025-06-03 15:12:07,313 | INFO     | sum of deviations: -45099121399.00001
[2025-06-03 17:12:20] 2025-06-03 15:12:07,313 | INFO     | mean x: 1748956584.0
[2025-06-03 17:12:20] 2025-06-03 15:12:07,313 | INFO     | mean y: 2610412.9170506913
[2025-06-03 17:12:20] 2025-06-03 15:12:07,313 | INFO     | -- intersect: 24896840965.77617
[2025-06-03 17:12:20] 2025-06-03 15:12:07,314 | INFO     | intersect: 24896840965.77617
[2025-06-03 17:12:20] 2025-06-03 15:12:07,314 | INFO     | chi2: 1.9669209176577678
[2025-06-03 17:12:20] 2025-06-03 15:12:07,314 | INFO     | current chi2=1.9669209176577678 (change=28.12475503789244 %)
[2025-06-03 17:12:20] 2025-06-03 15:12:07,315 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 17:12:20] 2025-06-03 15:12:07,316 | INFO     | sum of deviations: -41352504540.5
[2025-06-03 17:12:20] 2025-06-03 15:12:07,317 | INFO     | mean x: 1748956431.5
[2025-06-03 17:12:20] 2025-06-03 15:12:07,317 | INFO     | mean y: 2613083.117924528
[2025-06-03 17:12:20] 2025-06-03 15:12:07,317 | INFO     | -- intersect: 24482221431.371815
[2025-06-03 17:12:20] 2025-06-03 15:12:07,317 | INFO     | intersect: 24482221431.371815
[2025-06-03 17:12:20] 2025-06-03 15:12:07,317 | INFO     | chi2: 1.96785187106102
[2025-06-03 17:12:20] 2025-06-03 15:12:07,317 | INFO     | current chi2=1.96785187106102 (change=-0.047330494830509585 %)
[2025-06-03 17:12:20] 2025-06-03 15:12:07,317 | INFO     | right removable region: 211
[2025-06-03 17:12:20] 2025-06-03 15:12:07,318 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 17:12:20] 2025-06-03 15:12:07,320 | INFO     | sum of deviations: -104032965450.00003
[2025-06-03 17:12:20] 2025-06-03 15:12:07,320 | INFO     | mean x: 1748956889.0
[2025-06-03 17:12:20] 2025-06-03 15:12:07,328 | INFO     | mean y: 2625102.1705069123
[2025-06-03 17:12:20] 2025-06-03 15:12:07,329 | INFO     | -- intersect: 57427714512.12461
[2025-06-03 17:12:20] 2025-06-03 15:12:07,329 | INFO     | intersect: 57427714512.12461
[2025-06-03 17:12:20] 2025-06-03 15:12:07,329 | INFO     | chi2: 1.04542576407644
[2025-06-03 17:12:20] 2025-06-03 15:12:07,329 | INFO     | current chi2=1.04542576407644 (change=61.7980406796576 %)
[2025-06-03 17:12:20] 2025-06-03 15:12:07,330 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 17:12:20] 2025-06-03 15:12:07,332 | INFO     | sum of deviations: -107210850150.49998
[2025-06-03 17:12:20] 2025-06-03 15:12:07,332 | INFO     | mean x: 1748957041.5
[2025-06-03 17:12:20] 2025-06-03 15:12:07,332 | INFO     | mean y: 2627330.1933962265
[2025-06-03 17:12:20] 2025-06-03 15:12:07,332 | INFO     | -- intersect: 63468687412.761475
[2025-06-03 17:12:20] 2025-06-03 15:12:07,332 | INFO     | intersect: 63468687412.761475
[2025-06-03 17:12:20] 2025-06-03 15:12:07,333 | INFO     | chi2: 0.97530257659475
[2025-06-03 17:12:20] 2025-06-03 15:12:07,333 | INFO     | current chi2=0.97530257659475 (change=6.707619985206592 %)
[2025-06-03 17:12:20] 2025-06-03 15:12:07,333 | INFO     | left removable region: 20
[2025-06-03 17:12:20] 2025-06-03 15:12:07,333 | INFO     | sum of square deviations: 2160561440.0
[2025-06-03 17:12:20] 2025-06-03 15:12:07,335 | INFO     | sum of deviations: -77370370103.00002
[2025-06-03 17:12:20] 2025-06-03 15:12:07,335 | INFO     | mean x: 1748957011.0
[2025-06-03 17:12:20] 2025-06-03 15:12:07,335 | INFO     | mean y: 2640631.7068062825
[2025-06-03 17:12:20] 2025-06-03 15:12:07,335 | INFO     | -- intersect: 62633329456.416504
[2025-06-03 17:12:20] 2025-06-03 15:12:07,335 | INFO     | intersect: 62633329456.416504
[2025-06-03 17:12:20] 2025-06-03 15:12:07,336 | INFO     | chi2: 0.1620364450804687
[2025-06-03 17:12:20] 2025-06-03 15:12:07,336 | INFO     | -- intersect: 62633329456.416504
[2025-06-03 17:12:20] 2025-06-03 15:12:07,336 | INFO     | current memory leak: -35.81 B/s (using 191 data points, chi2=0.16)
[2025-06-03 17:12:20] 2025-06-03 15:12:07,337 | INFO     | ..............................
[2025-06-03 17:12:20] 2025-06-03 15:12:07,337 | INFO     | . Timing measurements:
[2025-06-03 17:12:20] 2025-06-03 15:12:07,337 | INFO     | . get job = 0 s
[2025-06-03 17:12:20] 2025-06-03 15:12:07,337 | INFO     | . initial setup = 2 s
[2025-06-03 17:12:20] 2025-06-03 15:12:07,337 | INFO     | . payload setup = 13 s
[2025-06-03 17:12:20] 2025-06-03 15:12:07,337 | INFO     | . stage-in = 0 s
[2025-06-03 17:12:20] 2025-06-03 15:12:07,337 | INFO     | . payload execution = 13530 s
[2025-06-03 17:12:20] 2025-06-03 15:12:07,337 | INFO     | . stage-out = 2 s
[2025-06-03 17:12:20] 2025-06-03 15:12:07,337 | INFO     | . log creation = 0 s
[2025-06-03 17:12:20] 2025-06-03 15:12:07,338 | INFO     | ..............................
[2025-06-03 17:12:20] 2025-06-03 15:12:07,760 | INFO     | 
[2025-06-03 17:12:20] 2025-06-03 15:12:07,761 | INFO     | job summary report
[2025-06-03 17:12:20] 2025-06-03 15:12:07,761 | INFO     | --------------------------------------------------
[2025-06-03 17:12:20] 2025-06-03 15:12:07,761 | INFO     | PanDA job id: 6677441741
[2025-06-03 17:12:20] 2025-06-03 15:12:07,761 | INFO     | task id: 45006595
[2025-06-03 17:12:20] 2025-06-03 15:12:07,761 | INFO     | errors: (none)
[2025-06-03 17:12:20] 2025-06-03 15:12:07,761 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:12:20] 2025-06-03 15:12:07,761 | INFO     | pilot state: finished 
[2025-06-03 17:12:20] 2025-06-03 15:12:07,761 | INFO     | transexitcode: 0
[2025-06-03 17:12:20] 2025-06-03 15:12:07,761 | INFO     | exeerrorcode: 0
[2025-06-03 17:12:20] 2025-06-03 15:12:07,761 | INFO     | exeerrordiag: 
[2025-06-03 17:12:20] 2025-06-03 15:12:07,762 | INFO     | exitcode: 0
[2025-06-03 17:12:20] 2025-06-03 15:12:07,762 | INFO     | exitmsg: OK
[2025-06-03 17:12:20] 2025-06-03 15:12:07,762 | INFO     | cpuconsumptiontime: 50724 s
[2025-06-03 17:12:20] 2025-06-03 15:12:07,762 | INFO     | nevents: 400
[2025-06-03 17:12:20] 2025-06-03 15:12:07,762 | INFO     | neventsw: 0
[2025-06-03 17:12:20] 2025-06-03 15:12:07,762 | INFO     | pid: 26443
[2025-06-03 17:12:20] 2025-06-03 15:12:07,762 | INFO     | pgrp: 26443
[2025-06-03 17:12:20] 2025-06-03 15:12:07,762 | INFO     | corecount: 8
[2025-06-03 17:12:20] 2025-06-03 15:12:07,762 | INFO     | event service: False
[2025-06-03 17:12:20] 2025-06-03 15:12:07,762 | INFO     | sizes: {0: 2405010, 1: 2405209, 2: 2405209, 12: 2405237, 14: 2405471, 23: 2405499, 13548: 2435261, 13551: 2444204, 13554: 2444260, 13566: 2444430}
[2025-06-03 17:12:20] 2025-06-03 15:12:07,762 | INFO     | --------------------------------------------------
[2025-06-03 17:12:20] 2025-06-03 15:12:07,762 | INFO     | 
[2025-06-03 17:12:20] 2025-06-03 15:12:07,763 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-03 17:12:20] 2025-06-03 15:12:07,808 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:12:20] 2025-06-03 15:12:07,808 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:12:20] 2025-06-03 15:12:07,808 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:12:20] 2025-06-03 15:12:07,808 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:12:20] 2025-06-03 15:12:07,809 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:12:20] 2025-06-03 15:12:07,809 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:12:20] 2025-06-03 15:12:07,809 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:12:20] 2025-06-03 15:12:07,809 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:12:20] 2025-06-03 15:12:07,809 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:12:20] 2025-06-03 15:12:07,809 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:12:20] 2025-06-03 15:12:07,809 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:12:20] 2025-06-03 15:12:07,809 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:12:20] 2025-06-03 15:12:07,809 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:12:20] 2025-06-03 15:12:07,809 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:12:20] 2025-06-03 15:12:07,809 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:12:20] 2025-06-03 15:12:07,810 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:12:20] 2025-06-03 15:12:07,810 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:12:20] 2025-06-03 15:12:07,810 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:12:20] 2025-06-03 15:12:07,810 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:12:20] 2025-06-03 15:12:07,810 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:12:20] 2025-06-03 15:12:07,810 | INFO     | job 6677441741 has completed (purged errors)
[2025-06-03 17:12:20] 2025-06-03 15:12:07,810 | INFO     | overall cleanup function is called
[2025-06-03 17:12:20] 2025-06-03 15:12:08,817 | INFO     | --- collectZombieJob: --- 10, [26443]
[2025-06-03 17:12:20] 2025-06-03 15:12:08,817 | INFO     | zombie collector waiting for pid 26443
[2025-06-03 17:12:20] 2025-06-03 15:12:08,817 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:12:20] 2025-06-03 15:12:08,818 | INFO     | collected zombie processes
[2025-06-03 17:12:20] 2025-06-03 15:12:08,818 | INFO     | will attempt to kill all subprocesses of pid=26443
[2025-06-03 17:12:20] 2025-06-03 15:12:08,908 | INFO     | process IDs to be killed: [26443] (in reverse order)
[2025-06-03 17:12:20] 2025-06-03 15:12:08,968 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:12:20] 2025-06-03 15:12:08,968 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:12:20] 2025-06-03 15:12:08,972 | INFO     | did not find any defunct processes belonging to 26443
[2025-06-03 17:12:20] 2025-06-03 15:12:08,975 | INFO     | did not find any defunct processes belonging to 26443
[2025-06-03 17:12:20] 2025-06-03 15:12:08,975 | INFO     | ready for new job
[2025-06-03 17:12:20] 2025-06-03 15:12:08,976 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:12:20] 2025-06-03 15:12:08,978 | INFO     | **************************************
[2025-06-03 17:12:20] 2025-06-03 15:12:08,978 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:12:20] 2025-06-03 15:12:08,978 | INFO     | **************************************
[2025-06-03 17:12:20] 2025-06-03 15:12:08,978 | INFO     | 
[2025-06-03 17:12:20] 2025-06-03 15:12:08,979 | INFO     | pilot is running in a VM
[2025-06-03 17:12:20] 2025-06-03 15:12:08,979 | INFO     | architecture information:
[2025-06-03 17:12:20] 2025-06-03 15:12:08,979 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:12:20] 2025-06-03 15:12:09,003 | INFO     | cat /etc/os-release:
[2025-06-03 17:12:20] NAME="CentOS Linux"
[2025-06-03 17:12:20] VERSION="7 (Core)"
[2025-06-03 17:12:20] ID="centos"
[2025-06-03 17:12:20] ID_LIKE="rhel fedora"
[2025-06-03 17:12:20] VERSION_ID="7"
[2025-06-03 17:12:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:12:20] ANSI_COLOR="0;31"
[2025-06-03 17:12:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:12:20] HOME_URL="https://www.centos.org/"
[2025-06-03 17:12:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:12:20] 
[2025-06-03 17:12:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:12:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:12:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:12:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:12:20] 
[2025-06-03 17:12:20] 2025-06-03 15:12:09,003 | INFO     | **************************************
[2025-06-03 17:12:20] 2025-06-03 15:12:09,505 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-03 17:12:20] 2025-06-03 15:12:09,529 | INFO     | sufficient remaining disk space (496940089344 B)
[2025-06-03 17:12:20] 2025-06-03 15:12:09,529 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:12:20] 2025-06-03 15:12:09,529 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:12:20] 2025-06-03 15:12:09,529 | INFO     | update_server=False
[2025-06-03 17:12:20] 2025-06-03 15:12:09,529 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:12:20] 2025-06-03 15:12:09,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:12:20] 2025-06-03 15:12:09,821 | INFO     | PID=13901 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 17:12:20] 2025-06-03 15:12:09,821 | INFO     | .. there are 9 such processes running
[2025-06-03 17:12:20] 2025-06-03 15:12:09,821 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:12:20] 2025-06-03 15:12:09,821 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:12:20] 2025-06-03 15:12:09,821 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:12:20] 2025-06-03 15:12:10,194 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:12:20] 2025-06-03 15:12:10,486 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:12:20] 2025-06-03 15:12:10,487 | INFO     | aborting loop
[2025-06-03 17:12:20] 2025-06-03 15:12:10,524 | INFO     | all data control threads have been joined
[2025-06-03 17:12:20] 2025-06-03 15:12:10,535 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:12:20] 2025-06-03 15:12:10,886 | INFO     | all payload control threads have been joined
[2025-06-03 17:12:20] 2025-06-03 15:12:11,058 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:12:20] 2025-06-03 15:12:11,132 | INFO     | [job] validate thread has finished
[2025-06-03 17:12:20] 2025-06-03 15:12:11,221 | INFO     | all job control threads have been joined
[2025-06-03 17:12:20] 2025-06-03 15:12:11,399 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:12:20] 2025-06-03 15:12:11,441 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:12:20] 2025-06-03 15:12:11,456 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:12:20] 2025-06-03 15:12:11,491 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:12:20] 2025-06-03 15:12:11,529 | INFO     | [data] control thread has finished
[2025-06-03 17:12:20] 2025-06-03 15:12:11,726 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:12:20] 2025-06-03 15:12:11,746 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:12:20] 2025-06-03 15:12:11,792 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:12:20] 2025-06-03 15:12:11,892 | INFO     | [payload] control thread has finished
[2025-06-03 17:12:20] 2025-06-03 15:12:11,975 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:12:20] 2025-06-03 15:12:12,227 | INFO     | [job] control thread has finished
[2025-06-03 17:12:20] 2025-06-03 15:12:12,506 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:12:20] 2025-06-03 15:12:13,512 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:12:20] 2025-06-03 15:12:14,201 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:12:20] 2025-06-03 15:12:14,562 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140327786268480)>', '<ExcThread(monitor, started 140327352514304)>']
[2025-06-03 17:12:20] 2025-06-03 15:12:14,844 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:12:20] 2025-06-03 15:12:14,845 | INFO     | [monitor] control thread has ended
[2025-06-03 17:12:20] 2025-06-03 15:12:19,588 | INFO     | all workflow threads have been joined
[2025-06-03 17:12:20] 2025-06-03 15:12:19,589 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:12:20] 2025-06-03 15:12:19,589 | INFO     | traces error code: 0
[2025-06-03 17:12:20] 2025-06-03 15:12:19,589 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:12:20] 2025-06-03 15:12:19,822 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:12:20] 2025-06-03 15:12:19,832 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:12:20] 2025-06-03 15:12:19,847 [wrapper] pilotpid: 13901
[2025-06-03 17:12:20] 2025-06-03 15:12:19,861 [wrapper] Pilot exit status: 0
[2025-06-03 17:12:20] 2025-06-03 15:12:19,898 [wrapper] pandaids: 6677441741
[2025-06-03 17:12:20] 2025-06-03 15:12:19,936 [wrapper] cleanup supervisor_pilot  8313 13902
[2025-06-03 17:12:20] 2025-06-03 15:12:19,952 [wrapper] Test setup, not cleaning
[2025-06-03 17:12:20] 2025-06-03 15:12:19,955 [wrapper] apfmon messages muted
[2025-06-03 17:12:20] 2025-06-03 15:12:19,959 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:12:20] 2025-06-03 15:12:19,967 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:12:20]  *** Error codes and diagnostics ***
[2025-06-03 17:12:20]     "exeErrorCode": 0,
[2025-06-03 17:12:20]     "exeErrorDiag": "",
[2025-06-03 17:12:20]     "pilotErrorCode": 0,
[2025-06-03 17:12:20]     "pilotErrorDiag": "",
[2025-06-03 17:12:20]  *** Listing of results directory ***
[2025-06-03 17:12:20] total 392148
[2025-06-03 17:12:20] -rw-r--r--. 1 boinc boinc    495897 Jun  3 03:09 pilot3.tar.gz
[2025-06-03 17:12:20] -rw-r--r--. 1 boinc boinc      5111 Jun  3 03:10 queuedata.json
[2025-06-03 17:12:20] -rwx------. 1 boinc boinc     37140 Jun  3 03:12 runpilot2-wrapper.sh
[2025-06-03 17:12:20] -rw-r--r--. 1 boinc boinc       100 Jun  3 13:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:12:20] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 13:25 run_atlas
[2025-06-03 17:12:20] -rw-r--r--. 1 boinc boinc       105 Jun  3 13:25 job.xml
[2025-06-03 17:12:20] -rw-r--r--. 2 boinc boinc 215005905 Jun  3 13:25 EVNT.45006593._000640.pool.root.1
[2025-06-03 17:12:20] -rw-r--r--. 1 boinc boinc      6392 Jun  3 13:25 init_data.xml
[2025-06-03 17:12:20] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:25 start_atlas.sh
[2025-06-03 17:12:20] drwxrwx--x. 2 boinc boinc        68 Jun  3 13:25 shared
[2025-06-03 17:12:20] -rw-r--r--. 2 boinc boinc    508875 Jun  3 13:25 input.tar.gz
[2025-06-03 17:12:20] -rw-r--r--. 1 boinc boinc         0 Jun  3 13:25 boinc_lockfile
[2025-06-03 17:12:20] -rw-r--r--. 1 boinc boinc      2523 Jun  3 13:25 pandaJob.out
[2025-06-03 17:12:20] -rw-------. 1 boinc boinc    982666 Jun  3 13:25 agis_schedconf.cvmfs.json
[2025-06-03 17:12:20] drwx------. 4 boinc boinc      4096 Jun  3 13:25 pilot3
[2025-06-03 17:12:20] -rw-------. 1 boinc boinc 179640831 Jun  3 17:10 HITS.45006595._015981.pool.root.1
[2025-06-03 17:12:20] -rw-r--r--. 1 boinc boinc       531 Jun  3 17:11 boinc_task_state.xml
[2025-06-03 17:12:20] -rw-------. 1 boinc boinc      1019 Jun  3 17:11 memory_monitor_summary.json
[2025-06-03 17:12:20] -rw-r--r--. 1 boinc boinc        28 Jun  3 17:11 wrapper_checkpoint.txt
[2025-06-03 17:12:20] -rw-r--r--. 1 boinc boinc      8192 Jun  3 17:11 boinc_mmap_file
[2025-06-03 17:12:20] -rw-------. 1 boinc boinc   1603667 Jun  3 17:11 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:12:20] -rw-------. 1 boinc boinc    370213 Jun  3 17:11 log.45006595._015981.job.log.tgz.1
[2025-06-03 17:12:20] -rw-------. 1 boinc boinc        95 Jun  3 17:11 pilot_heartbeat.json
[2025-06-03 17:12:20] -rw-------. 1 boinc boinc      7691 Jun  3 17:12 heartbeat.json
[2025-06-03 17:12:20] -rw-------. 1 boinc boinc      4809 Jun  3 17:12 pilotlog.txt
[2025-06-03 17:12:20] -rw-------. 1 boinc boinc   1178640 Jun  3 17:12 log.45006595._015981.job.log.1
[2025-06-03 17:12:20] -rw-------. 1 boinc boinc       357 Jun  3 17:12 output.list
[2025-06-03 17:12:20] -rw-r--r--. 1 boinc boinc       620 Jun  3 17:12 runtime_log
[2025-06-03 17:12:20] -rw-------. 1 boinc boinc   1566720 Jun  3 17:12 result.tar.gz
[2025-06-03 17:12:20] -rw-------. 1 boinc boinc       656 Jun  3 17:12 YDQNDmQNVg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5MhKDmvMdrim.diag
[2025-06-03 17:12:20] -rw-r--r--. 1 boinc boinc      8673 Jun  3 17:12 runtime_log.err
[2025-06-03 17:12:20] -rw-r--r--. 1 boinc boinc     20569 Jun  3 17:12 stderr.txt
[2025-06-03 17:12:20] HITS file was successfully produced:
[2025-06-03 17:12:20] -rw-------. 1 boinc boinc 179640831 Jun  3 17:10 shared/HITS.pool.root.1
[2025-06-03 17:12:20]  *** Contents of shared directory: ***
[2025-06-03 17:12:20] total 387448
[2025-06-03 17:12:20] -rw-r--r--. 2 boinc boinc 215005905 Jun  3 13:25 ATLAS.root_0
[2025-06-03 17:12:20] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:25 start_atlas.sh
[2025-06-03 17:12:20] -rw-r--r--. 2 boinc boinc    508875 Jun  3 13:25 input.tar.gz
[2025-06-03 17:12:20] -rw-------. 1 boinc boinc 179640831 Jun  3 17:10 HITS.pool.root.1
[2025-06-03 17:12:20] -rw-------. 1 boinc boinc   1566720 Jun  3 17:12 result.tar.gz
17:12:21 (9865): run_atlas exited; CPU time 50889.288835
17:12:21 (9865): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN