Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:02:06 (1612432): wrapper (7.7.26015): starting
01:02:06 (1612432): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 01:02:06] Arguments: --nthreads 8
[2025-06-03 01:02:06] Threads: 8
[2025-06-03 01:02:06] Checking for CVMFS
[2025-06-03 01:02:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 01:02:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 01:02:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 01:02:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 01:02:07] 2.12.6.0 3903359 108535 591864 146730 3 187 18222255 32935936 3638 130560 1 351716222 99.619 354979632 22539 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 01:02:07] CVMFS is ok
[2025-06-03 01:02:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 01:02:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 01:02:07] Further information can be found at the LHC@home message board.
[2025-06-03 01:02:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 01:02:07] Checking for apptainer binary...
[2025-06-03 01:02:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 01:02:07] Running /usr/bin/apptainer --version
[2025-06-03 01:02:07] apptainer version 1.4.1-1.el9
[2025-06-03 01:02:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 01:02:07] c-8-39.aglt2.org
[2025-06-03 01:02:07] apptainer works
[2025-06-03 01:02:07] Set ATHENA_PROC_NUMBER=8
[2025-06-03 01:02:07] Set ATHENA_CORE_NUMBER=8
[2025-06-03 01:02:07] Starting ATLAS job with PandaID=6677401608
[2025-06-03 01:02:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 02:47:04]  *** The last 200 lines of the pilot log: ***
[2025-06-03 02:47:04] 2025-06-03 06:46:51,401 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 02:47:04] 2025-06-03 06:46:51,401 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677401608/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 02:47:04] 2025-06-03 06:46:51,403 | INFO     | extracted standard info from prmon json
[2025-06-03 02:47:04] 2025-06-03 06:46:51,403 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 02:47:04] 2025-06-03 06:46:51,403 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 02:47:04] 2025-06-03 06:46:51,404 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 02:47:04] 2025-06-03 06:46:51,404 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 02:47:04] 2025-06-03 06:46:51,407 | INFO     | fitting pss+swap vs Time
[2025-06-03 02:47:04] 2025-06-03 06:46:51,407 | INFO     | sum of square deviations: 338804492.0
[2025-06-03 02:47:04] 2025-06-03 06:46:51,408 | INFO     | sum of deviations: 31758405417.0
[2025-06-03 02:47:04] 2025-06-03 06:46:51,408 | INFO     | mean x: 1748930072.0
[2025-06-03 02:47:04] 2025-06-03 06:46:51,408 | INFO     | mean y: 2033999.2524271845
[2025-06-03 02:47:04] 2025-06-03 06:46:51,408 | INFO     | -- intersect: -163936849882.3668
[2025-06-03 02:47:04] 2025-06-03 06:46:51,408 | INFO     | intersect: -163936849882.3668
[2025-06-03 02:47:04] 2025-06-03 06:46:51,409 | INFO     | chi2: 4.3931824496658045
[2025-06-03 02:47:04] 2025-06-03 06:46:51,409 | INFO     | sum of square deviations: 291817564.5
[2025-06-03 02:47:04] 2025-06-03 06:46:51,410 | INFO     | sum of deviations: 36094104552.00001
[2025-06-03 02:47:04] 2025-06-03 06:46:51,410 | INFO     | mean x: 1748929919.5
[2025-06-03 02:47:04] 2025-06-03 06:46:51,410 | INFO     | mean y: 2047304.0612244897
[2025-06-03 02:47:04] 2025-06-03 06:46:51,410 | INFO     | -- intersect: -216318239916.1892
[2025-06-03 02:47:04] 2025-06-03 06:46:51,410 | INFO     | intersect: -216318239916.1892
[2025-06-03 02:47:04] 2025-06-03 06:46:51,411 | INFO     | chi2: 3.5759782394222857
[2025-06-03 02:47:04] 2025-06-03 06:46:51,411 | INFO     | current chi2=3.5759782394222857 (change=18.601645153746908 %)
[2025-06-03 02:47:04] 2025-06-03 06:46:51,411 | INFO     | right removable region: 97
[2025-06-03 02:47:04] 2025-06-03 06:46:51,411 | INFO     | sum of square deviations: 291817564.5
[2025-06-03 02:47:04] 2025-06-03 06:46:51,412 | INFO     | sum of deviations: 10109060635.5
[2025-06-03 02:47:04] 2025-06-03 06:46:51,412 | INFO     | mean x: 1748930224.5
[2025-06-03 02:47:04] 2025-06-03 06:46:51,412 | INFO     | mean y: 2103914.5
[2025-06-03 02:47:04] 2025-06-03 06:46:51,412 | INFO     | -- intersect: -60583836883.89607
[2025-06-03 02:47:04] 2025-06-03 06:46:51,412 | INFO     | intersect: -60583836883.89607
[2025-06-03 02:47:04] 2025-06-03 06:46:51,413 | INFO     | chi2: 1.833935807492081
[2025-06-03 02:47:04] 2025-06-03 06:46:51,413 | INFO     | current chi2=1.833935807492081 (change=58.25495916675186 %)
[2025-06-03 02:47:04] 2025-06-03 06:46:51,413 | INFO     | sum of square deviations: 249388862.0
[2025-06-03 02:47:04] 2025-06-03 06:46:51,414 | INFO     | sum of deviations: -3288975430.0
[2025-06-03 02:47:04] 2025-06-03 06:46:51,414 | INFO     | mean x: 1748930377.0
[2025-06-03 02:47:04] 2025-06-03 06:46:51,414 | INFO     | mean y: 2151735.9569892474
[2025-06-03 02:47:04] 2025-06-03 06:46:51,414 | INFO     | -- intersect: 23067291825.227043
[2025-06-03 02:47:04] 2025-06-03 06:46:51,414 | INFO     | intersect: 23067291825.227043
[2025-06-03 02:47:04] 2025-06-03 06:46:51,414 | INFO     | chi2: 0.8552166857660541
[2025-06-03 02:47:04] 2025-06-03 06:46:51,415 | INFO     | current chi2=0.8552166857660541 (change=53.36714173569857 %)
[2025-06-03 02:47:04] 2025-06-03 06:46:51,415 | INFO     | sum of square deviations: 211285822.0
[2025-06-03 02:47:04] 2025-06-03 06:46:51,415 | INFO     | sum of deviations: -3971362239.0
[2025-06-03 02:47:04] 2025-06-03 06:46:51,415 | INFO     | mean x: 1748930529.5
[2025-06-03 02:47:04] 2025-06-03 06:46:51,416 | INFO     | mean y: 2154392.3181818184
[2025-06-03 02:47:04] 2025-06-03 06:46:51,416 | INFO     | -- intersect: 32875333471.464226
[2025-06-03 02:47:04] 2025-06-03 06:46:51,416 | INFO     | intersect: 32875333471.464226
[2025-06-03 02:47:04] 2025-06-03 06:46:51,416 | INFO     | chi2: 0.8501547017889605
[2025-06-03 02:47:04] 2025-06-03 06:46:51,416 | INFO     | current chi2=0.8501547017889605 (change=0.5918949035190352 %)
[2025-06-03 02:47:04] 2025-06-03 06:46:51,416 | INFO     | left removable region: 30
[2025-06-03 02:47:04] 2025-06-03 06:46:51,417 | INFO     | sum of square deviations: 93240818.0
[2025-06-03 02:47:04] 2025-06-03 06:46:51,417 | INFO     | sum of deviations: 657183561.0
[2025-06-03 02:47:04] 2025-06-03 06:46:51,417 | INFO     | mean x: 1748930804.0
[2025-06-03 02:47:04] 2025-06-03 06:46:51,417 | INFO     | mean y: 2180903.5223880596
[2025-06-03 02:47:04] 2025-06-03 06:46:51,417 | INFO     | -- intersect: -12324701232.103159
[2025-06-03 02:47:04] 2025-06-03 06:46:51,418 | INFO     | intersect: -12324701232.103159
[2025-06-03 02:47:04] 2025-06-03 06:46:51,418 | INFO     | chi2: 0.007059653838079963
[2025-06-03 02:47:04] 2025-06-03 06:46:51,418 | INFO     | -- intersect: -12324701232.103159
[2025-06-03 02:47:04] 2025-06-03 06:46:51,418 | INFO     | current memory leak: 7.05 B/s (using 67 data points, chi2=0.01)
[2025-06-03 02:47:04] 2025-06-03 06:46:51,419 | INFO     | ..............................
[2025-06-03 02:47:04] 2025-06-03 06:46:51,419 | INFO     | . Timing measurements:
[2025-06-03 02:47:04] 2025-06-03 06:46:51,419 | INFO     | . get job = 0 s
[2025-06-03 02:47:04] 2025-06-03 06:46:51,419 | INFO     | . initial setup = 3 s
[2025-06-03 02:47:04] 2025-06-03 06:46:51,419 | INFO     | . payload setup = 4 s
[2025-06-03 02:47:04] 2025-06-03 06:46:51,419 | INFO     | . stage-in = 0 s
[2025-06-03 02:47:04] 2025-06-03 06:46:51,420 | INFO     | . payload execution = 6245 s
[2025-06-03 02:47:04] 2025-06-03 06:46:51,420 | INFO     | . stage-out = 0 s
[2025-06-03 02:47:04] 2025-06-03 06:46:51,420 | INFO     | . log creation = 0 s
[2025-06-03 02:47:04] 2025-06-03 06:46:51,420 | INFO     | ..............................
[2025-06-03 02:47:04] 2025-06-03 06:46:51,536 | INFO     | 
[2025-06-03 02:47:04] 2025-06-03 06:46:51,536 | INFO     | job summary report
[2025-06-03 02:47:04] 2025-06-03 06:46:51,536 | INFO     | --------------------------------------------------
[2025-06-03 02:47:04] 2025-06-03 06:46:51,536 | INFO     | PanDA job id: 6677401608
[2025-06-03 02:47:04] 2025-06-03 06:46:51,536 | INFO     | task id: 45006595
[2025-06-03 02:47:04] 2025-06-03 06:46:51,536 | INFO     | errors: (none)
[2025-06-03 02:47:04] 2025-06-03 06:46:51,537 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 02:47:04] 2025-06-03 06:46:51,537 | INFO     | pilot state: finished 
[2025-06-03 02:47:04] 2025-06-03 06:46:51,537 | INFO     | transexitcode: 0
[2025-06-03 02:47:04] 2025-06-03 06:46:51,537 | INFO     | exeerrorcode: 0
[2025-06-03 02:47:04] 2025-06-03 06:46:51,537 | INFO     | exeerrordiag: 
[2025-06-03 02:47:04] 2025-06-03 06:46:51,537 | INFO     | exitcode: 0
[2025-06-03 02:47:04] 2025-06-03 06:46:51,537 | INFO     | exitmsg: OK
[2025-06-03 02:47:04] 2025-06-03 06:46:51,538 | INFO     | cpuconsumptiontime: 43830 s
[2025-06-03 02:47:04] 2025-06-03 06:46:51,538 | INFO     | nevents: 400
[2025-06-03 02:47:04] 2025-06-03 06:46:51,538 | INFO     | neventsw: 0
[2025-06-03 02:47:04] 2025-06-03 06:46:51,538 | INFO     | pid: 1622674
[2025-06-03 02:47:04] 2025-06-03 06:46:51,538 | INFO     | pgrp: 1622674
[2025-06-03 02:47:04] 2025-06-03 06:46:51,538 | INFO     | corecount: 8
[2025-06-03 02:47:04] 2025-06-03 06:46:51,538 | INFO     | event service: False
[2025-06-03 02:47:04] 2025-06-03 06:46:51,539 | INFO     | sizes: {0: 2405182, 4: 2405388, 11: 2405416, 6254: 2432396, 6255: 2441393, 6259: 2441507}
[2025-06-03 02:47:04] 2025-06-03 06:46:51,539 | INFO     | --------------------------------------------------
[2025-06-03 02:47:04] 2025-06-03 06:46:51,539 | INFO     | 
[2025-06-03 02:47:04] 2025-06-03 06:46:51,539 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-03 02:47:04] 2025-06-03 06:46:51,555 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 02:47:04] 2025-06-03 06:46:51,556 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 02:47:04] 2025-06-03 06:46:51,556 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 02:47:04] 2025-06-03 06:46:51,556 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 02:47:04] 2025-06-03 06:46:51,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 02:47:04] 2025-06-03 06:46:51,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 02:47:04] 2025-06-03 06:46:51,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 02:47:04] 2025-06-03 06:46:51,556 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 02:47:04] 2025-06-03 06:46:51,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 02:47:04] 2025-06-03 06:46:51,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 02:47:04] 2025-06-03 06:46:51,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 02:47:04] 2025-06-03 06:46:51,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 02:47:04] 2025-06-03 06:46:51,557 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 02:47:04] 2025-06-03 06:46:51,557 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 02:47:04] 2025-06-03 06:46:51,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 02:47:04] 2025-06-03 06:46:51,558 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 02:47:04] 2025-06-03 06:46:51,558 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 02:47:04] 2025-06-03 06:46:51,558 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 02:47:04] 2025-06-03 06:46:51,558 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 02:47:04] 2025-06-03 06:46:51,558 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 02:47:04] 2025-06-03 06:46:51,558 | INFO     | job 6677401608 has completed (purged errors)
[2025-06-03 02:47:04] 2025-06-03 06:46:51,559 | INFO     | overall cleanup function is called
[2025-06-03 02:47:04] 2025-06-03 06:46:52,566 | INFO     | --- collectZombieJob: --- 10, [1622674]
[2025-06-03 02:47:04] 2025-06-03 06:46:52,566 | INFO     | zombie collector waiting for pid 1622674
[2025-06-03 02:47:04] 2025-06-03 06:46:52,566 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 02:47:04] 2025-06-03 06:46:52,567 | INFO     | collected zombie processes
[2025-06-03 02:47:04] 2025-06-03 06:46:52,567 | INFO     | will attempt to kill all subprocesses of pid=1622674
[2025-06-03 02:47:04] 2025-06-03 06:46:52,911 | INFO     | process IDs to be killed: [1622674] (in reverse order)
[2025-06-03 02:47:04] 2025-06-03 06:46:52,994 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 02:47:04] 2025-06-03 06:46:52,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 02:47:04] 2025-06-03 06:46:53,004 | INFO     | did not find any defunct processes belonging to 1622674
[2025-06-03 02:47:04] 2025-06-03 06:46:53,011 | INFO     | did not find any defunct processes belonging to 1622674
[2025-06-03 02:47:04] 2025-06-03 06:46:53,012 | INFO     | ready for new job
[2025-06-03 02:47:04] 2025-06-03 06:46:53,012 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 02:47:04] 2025-06-03 06:46:53,014 | INFO     | **************************************
[2025-06-03 02:47:04] 2025-06-03 06:46:53,014 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 02:47:04] 2025-06-03 06:46:53,014 | INFO     | **************************************
[2025-06-03 02:47:04] 2025-06-03 06:46:53,014 | INFO     | 
[2025-06-03 02:47:04] 2025-06-03 06:46:53,029 | INFO     | architecture information:
[2025-06-03 02:47:04] 2025-06-03 06:46:53,029 | INFO     | executing command: cat /etc/os-release
[2025-06-03 02:47:04] 2025-06-03 06:46:53,043 | INFO     | cat /etc/os-release:
[2025-06-03 02:47:04] NAME="CentOS Linux"
[2025-06-03 02:47:04] VERSION="7 (Core)"
[2025-06-03 02:47:04] ID="centos"
[2025-06-03 02:47:04] ID_LIKE="rhel fedora"
[2025-06-03 02:47:04] VERSION_ID="7"
[2025-06-03 02:47:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 02:47:04] ANSI_COLOR="0;31"
[2025-06-03 02:47:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 02:47:04] HOME_URL="https://www.centos.org/"
[2025-06-03 02:47:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 02:47:04] 
[2025-06-03 02:47:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 02:47:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 02:47:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 02:47:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 02:47:04] 
[2025-06-03 02:47:04] 2025-06-03 06:46:53,043 | INFO     | **************************************
[2025-06-03 02:47:04] 2025-06-03 06:46:53,546 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-03 02:47:04] 2025-06-03 06:46:53,561 | INFO     | sufficient remaining disk space (73577529344 B)
[2025-06-03 02:47:04] 2025-06-03 06:46:53,562 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 02:47:04] 2025-06-03 06:46:53,562 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 02:47:04] 2025-06-03 06:46:53,562 | INFO     | update_server=False
[2025-06-03 02:47:04] 2025-06-03 06:46:53,562 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 02:47:04] 2025-06-03 06:46:53,563 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 02:47:04] 2025-06-03 06:46:53,563 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 02:47:04] 2025-06-03 06:46:53,863 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 02:47:04] 2025-06-03 06:46:53,863 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 02:47:04] 2025-06-03 06:46:53,863 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 02:47:04] 2025-06-03 06:46:53,954 | INFO     | all payload control threads have been joined
[2025-06-03 02:47:04] 2025-06-03 06:46:53,969 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:47:04] 2025-06-03 06:46:53,969 | INFO     | aborting loop
[2025-06-03 02:47:04] 2025-06-03 06:46:54,547 | INFO     | all data control threads have been joined
[2025-06-03 02:47:04] 2025-06-03 06:46:54,568 | INFO     | [job] retrieve thread has finished
[2025-06-03 02:47:04] 2025-06-03 06:46:54,581 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 02:47:04] 2025-06-03 06:46:54,710 | INFO     | [data] copytool_in thread has finished
[2025-06-03 02:47:04] 2025-06-03 06:46:54,838 | INFO     | [payload] failed_post thread has finished
[2025-06-03 02:47:04] 2025-06-03 06:46:54,949 | INFO     | all job control threads have been joined
[2025-06-03 02:47:04] 2025-06-03 06:46:54,959 | INFO     | [payload] control thread has finished
[2025-06-03 02:47:04] 2025-06-03 06:46:54,973 | INFO     | [job] job monitor thread has finished
[2025-06-03 02:47:04] 2025-06-03 06:46:55,006 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 02:47:04] 2025-06-03 06:46:55,007 | INFO     | [job] validate thread has finished
[2025-06-03 02:47:04] 2025-06-03 06:46:55,018 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 02:47:04] 2025-06-03 06:46:55,428 | INFO     | [payload] validate_post thread has finished
[2025-06-03 02:47:04] 2025-06-03 06:46:55,491 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 02:47:04] 2025-06-03 06:46:55,551 | INFO     | [data] control thread has finished
[2025-06-03 02:47:04] 2025-06-03 06:46:55,568 | INFO     | [data] copytool_out thread has finished
[2025-06-03 02:47:04] 2025-06-03 06:46:55,954 | INFO     | [job] control thread has finished
[2025-06-03 02:47:04] 2025-06-03 06:46:56,546 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:47:04] 2025-06-03 06:46:57,552 | INFO     | [job] queue monitor thread has finished
[2025-06-03 02:47:04] 2025-06-03 06:46:57,569 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 02:47:04] 2025-06-03 06:46:59,563 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139751434483520)>', '<ExcThread(monitor, started 139750652507904)>']
[2025-06-03 02:47:04] 2025-06-03 06:46:59,893 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 02:47:04] 2025-06-03 06:46:59,893 | INFO     | [monitor] control thread has ended
[2025-06-03 02:47:04] 2025-06-03 06:47:04,571 | INFO     | all workflow threads have been joined
[2025-06-03 02:47:04] 2025-06-03 06:47:04,571 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 02:47:04] 2025-06-03 06:47:04,571 | INFO     | traces error code: 0
[2025-06-03 02:47:04] 2025-06-03 06:47:04,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 02:47:04] 2025-06-03 06:47:04,712 [wrapper] ==== pilot stdout END ====
[2025-06-03 02:47:04] 2025-06-03 06:47:04,715 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 02:47:04] 2025-06-03 06:47:04,717 [wrapper] pilotpid: 1616068
[2025-06-03 02:47:04] 2025-06-03 06:47:04,719 [wrapper] Pilot exit status: 0
[2025-06-03 02:47:04] 2025-06-03 06:47:04,727 [wrapper] pandaids: 6677401608
[2025-06-03 02:47:04] 2025-06-03 06:47:04,783 [wrapper] cleanup supervisor_pilot 1833477 1616069
[2025-06-03 02:47:04] 2025-06-03 06:47:04,785 [wrapper] Test setup, not cleaning
[2025-06-03 02:47:04] 2025-06-03 06:47:04,788 [wrapper] apfmon messages muted
[2025-06-03 02:47:04] 2025-06-03 06:47:04,790 [wrapper] ==== wrapper stdout END ====
[2025-06-03 02:47:04] 2025-06-03 06:47:04,792 [wrapper] ==== wrapper stderr END ====
[2025-06-03 02:47:04]  *** Error codes and diagnostics ***
[2025-06-03 02:47:04]     "exeErrorCode": 0,
[2025-06-03 02:47:04]     "exeErrorDiag": "",
[2025-06-03 02:47:04]     "pilotErrorCode": 0,
[2025-06-03 02:47:04]     "pilotErrorDiag": "",
[2025-06-03 02:47:04]  *** Listing of results directory ***
[2025-06-03 02:47:04] total 393224
[2025-06-03 02:47:04] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 17:10 pilot3.tar.gz
[2025-06-03 02:47:04] -rwx------. 1 boincer umatlas     37140 Jun  2 17:26 runpilot2-wrapper.sh
[2025-06-03 02:47:04] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 17:26 queuedata.json
[2025-06-03 02:47:04] -rw-r--r--. 1 boincer umatlas       100 Jun  3 01:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 02:47:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 01:02 run_atlas
[2025-06-03 02:47:04] -rw-r--r--. 1 boincer umatlas       105 Jun  3 01:02 job.xml
[2025-06-03 02:47:04] -rw-r--r--. 2 boincer umatlas 218346662 Jun  3 01:02 EVNT.45006593._000491.pool.root.1
[2025-06-03 02:47:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 01:02 start_atlas.sh
[2025-06-03 02:47:04] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 01:02 shared
[2025-06-03 02:47:04] -rw-r--r--. 2 boincer umatlas    508875 Jun  3 01:02 input.tar.gz
[2025-06-03 02:47:04] -rw-r--r--. 1 boincer umatlas         0 Jun  3 01:02 boinc_lockfile
[2025-06-03 02:47:04] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 01:02 pandaJob.out
[2025-06-03 02:47:04] -rw-------. 1 boincer umatlas    988081 Jun  3 01:02 agis_schedconf.cvmfs.json
[2025-06-03 02:47:04] -rw-------. 1 boincer umatlas   1603667 Jun  3 01:02 agis_ddmendpoints.agis.ALL.json
[2025-06-03 02:47:04] drwx------. 4 boincer umatlas      4096 Jun  3 01:02 pilot3
[2025-06-03 02:47:04] -rw-------. 1 boincer umatlas 178646435 Jun  3 02:46 HITS.45006595._012262.pool.root.1
[2025-06-03 02:47:04] -rw-------. 1 boincer umatlas        95 Jun  3 02:46 pilot_heartbeat.json
[2025-06-03 02:47:04] -rw-r--r--. 1 boincer umatlas       530 Jun  3 02:46 boinc_task_state.xml
[2025-06-03 02:47:04] -rw-r--r--. 1 boincer umatlas      6629 Jun  3 02:46 init_data.xml
[2025-06-03 02:47:04] -rw-------. 1 boincer umatlas      1032 Jun  3 02:46 memory_monitor_summary.json
[2025-06-03 02:47:04] -rw-------. 1 boincer umatlas    316944 Jun  3 02:46 log.45006595._012262.job.log.tgz.1
[2025-06-03 02:47:04] -rw-------. 1 boincer umatlas      7704 Jun  3 02:46 heartbeat.json
[2025-06-03 02:47:04] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 02:47 boinc_mmap_file
[2025-06-03 02:47:04] -rw-r--r--. 1 boincer umatlas        27 Jun  3 02:47 wrapper_checkpoint.txt
[2025-06-03 02:47:04] -rw-------. 1 boincer umatlas      4353 Jun  3 02:47 pilotlog.txt
[2025-06-03 02:47:04] -rw-------. 1 boincer umatlas    595373 Jun  3 02:47 log.45006595._012262.job.log.1
[2025-06-03 02:47:04] -rw-------. 1 boincer umatlas       357 Jun  3 02:47 output.list
[2025-06-03 02:47:04] -rw-r--r--. 1 boincer umatlas       620 Jun  3 02:47 runtime_log
[2025-06-03 02:47:04] -rw-------. 1 boincer umatlas    931840 Jun  3 02:47 result.tar.gz
[2025-06-03 02:47:04] -rw-------. 1 boincer umatlas       650 Jun  3 02:47 tVTKDmJrRg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFfWKDmYhXYFm.diag
[2025-06-03 02:47:04] -rw-r--r--. 1 boincer umatlas      8649 Jun  3 02:47 runtime_log.err
[2025-06-03 02:47:04] -rw-r--r--. 1 boincer umatlas     20763 Jun  3 02:47 stderr.txt
[2025-06-03 02:47:04] HITS file was successfully produced:
[2025-06-03 02:47:04] -rw-------. 1 boincer umatlas 178646435 Jun  3 02:46 shared/HITS.pool.root.1
[2025-06-03 02:47:04]  *** Contents of shared directory: ***
[2025-06-03 02:47:04] total 389128
[2025-06-03 02:47:04] -rw-r--r--. 2 boincer umatlas 218346662 Jun  3 01:02 ATLAS.root_0
[2025-06-03 02:47:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 01:02 start_atlas.sh
[2025-06-03 02:47:04] -rw-r--r--. 2 boincer umatlas    508875 Jun  3 01:02 input.tar.gz
[2025-06-03 02:47:04] -rw-------. 1 boincer umatlas 178646435 Jun  3 02:46 HITS.pool.root.1
[2025-06-03 02:47:04] -rw-------. 1 boincer umatlas    931840 Jun  3 02:47 result.tar.gz
02:47:06 (1612432): run_atlas exited; CPU time 44060.205847
02:47:06 (1612432): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN