Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:06:13 (2704444): wrapper (7.7.26015): starting
01:06:13 (2704444): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 01:06:13] Arguments: --nthreads 8
[2025-06-03 01:06:13] Threads: 8
[2025-06-03 01:06:13] Checking for CVMFS
[2025-06-03 01:06:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 01:06:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 01:06:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 01:06:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 01:06:13] 2.12.6.0 5013 35429 597976 146730 0 501 21659733 32935937 14869 16776704 1 492285995 99.666 412453566 36173 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 01:06:13] CVMFS is ok
[2025-06-03 01:06:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 01:06:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 01:06:13] Further information can be found at the LHC@home message board.
[2025-06-03 01:06:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 01:06:13] Checking for apptainer binary...
[2025-06-03 01:06:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 01:06:13] Running /usr/bin/apptainer --version
[2025-06-03 01:06:13] apptainer version 1.4.1-1.el9
[2025-06-03 01:06:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 01:06:13] c7-9-15.aglt2.org
[2025-06-03 01:06:13] apptainer works
[2025-06-03 01:06:13] Set ATHENA_PROC_NUMBER=8
[2025-06-03 01:06:13] Set ATHENA_CORE_NUMBER=8
[2025-06-03 01:06:14] Starting ATLAS job with PandaID=6677401586
[2025-06-03 01:06:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 02:02:57]  *** The last 200 lines of the pilot log: ***
[2025-06-03 02:02:57]  is_tar=False
[2025-06-03 02:02:57]  lfn=log.45006595._012240.job.log.tgz.1
[2025-06-03 02:02:57]  mtime=0
[2025-06-03 02:02:57]  protocol_id=None
[2025-06-03 02:02:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 02:02:57]  replicas=None
[2025-06-03 02:02:57]  scope=mc23_13p6TeV
[2025-06-03 02:02:57]  status=None
[2025-06-03 02:02:57]  status_code=0
[2025-06-03 02:02:57]  storage_token=
[2025-06-03 02:02:57]  surl=/tmp/boinchome/slots/6/PanDA_Pilot-6677401586/log.45006595._012240.job.log.tgz.1
[2025-06-03 02:02:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ca/d9/log.45006595._012240.job.log.tgz.1
[2025-06-03 02:02:57]  workdir=None
[2025-06-03 02:02:57] ]
[2025-06-03 02:02:57] 2025-06-03 06:02:29,130 | INFO     | transferring file log.45006595._012240.job.log.tgz.1 from /tmp/boinchome/slots/6/PanDA_Pilot-6677401586/log.45006595._012240.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 02:02:57] 2025-06-03 06:02:29,130 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/6/PanDA_Pilot-6677401586/log.45006595._012240.job.log.tgz.1 /tmp/boinchome/slots/6/log.45006595._012240.job
[2025-06-03 02:02:57] 2025-06-03 06:02:29,145 | INFO     | adding to output.list: log.45006595._012240.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ca/d9/log.45006595._012240.job.log.tg
[2025-06-03 02:02:57] 2025-06-03 06:02:29,146 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 02:02:57] 2025-06-03 06:02:29,146 | INFO     | summary of transferred files:
[2025-06-03 02:02:57] 2025-06-03 06:02:29,146 | INFO     |  -- lfn=log.45006595._012240.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 02:02:57] 2025-06-03 06:02:29,146 | INFO     | stage-out finished correctly
[2025-06-03 02:02:57] 2025-06-03 06:02:30,620 | INFO     | monitor loop #242: job 0:6677401586 is in state 'finished'
[2025-06-03 02:02:57] 2025-06-03 06:02:30,621 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 02:02:57] 2025-06-03 06:02:31,792 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 02:02:57] 2025-06-03 06:02:32,808 | INFO     | job 6677401586 has state=finished
[2025-06-03 02:02:57] 2025-06-03 06:02:32,808 | INFO     | preparing for final server update for job 6677401586 in state='finished'
[2025-06-03 02:02:57] 2025-06-03 06:02:32,809 | INFO     | this job has now completed (state=finished)
[2025-06-03 02:02:57] 2025-06-03 06:02:32,809 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 02:02:57] 2025-06-03 06:02:32,809 | INFO     | log transfer has been attempted: DONE
[2025-06-03 02:02:57] 2025-06-03 06:02:32,809 | INFO     | job 6677401586 has finished - writing final server update
[2025-06-03 02:02:57] 2025-06-03 06:02:32,809 | INFO     | total number of processed events: 400 (read)
[2025-06-03 02:02:57] 2025-06-03 06:02:32,826 | INFO     | executing command: lscpu
[2025-06-03 02:02:57] 2025-06-03 06:02:32,912 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 02:02:57] 2025-06-03 06:02:33,122 | INFO     | monitor loop #243: job 0:6677401586 is in state 'finished'
[2025-06-03 02:02:57] 2025-06-03 06:02:33,122 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 02:02:57] 2025-06-03 06:02:34,072 | INFO     | PID=2713186 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 02:02:57] 2025-06-03 06:02:34,072 | INFO     | .. there are 21 such processes running
[2025-06-03 02:02:57] 2025-06-03 06:02:35,625 | INFO     | monitor loop #244: job 0:6677401586 is in state 'finished'
[2025-06-03 02:02:57] 2025-06-03 06:02:35,625 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 02:02:57] 2025-06-03 06:02:36,248 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 02:02:57] 2025-06-03 06:02:36,248 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6677401586/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 02:02:57] 2025-06-03 06:02:36,248 | INFO     | extracted standard info from prmon json
[2025-06-03 02:02:57] 2025-06-03 06:02:36,248 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 02:02:57] 2025-06-03 06:02:36,248 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 02:02:57] 2025-06-03 06:02:36,249 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 02:02:57] 2025-06-03 06:02:36,249 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 02:02:57] 2025-06-03 06:02:36,250 | INFO     | fitting pss+swap vs Time
[2025-06-03 02:02:57] 2025-06-03 06:02:36,250 | INFO     | sum of square deviations: 34277852.0
[2025-06-03 02:02:57] 2025-06-03 06:02:36,250 | INFO     | sum of deviations: 5945580909.5
[2025-06-03 02:02:57] 2025-06-03 06:02:36,250 | INFO     | mean x: 1748928939.5
[2025-06-03 02:02:57] 2025-06-03 06:02:36,250 | INFO     | mean y: 2101112.9791666665
[2025-06-03 02:02:57] 2025-06-03 06:02:36,250 | INFO     | -- intersect: -303354086864.1228
[2025-06-03 02:02:57] 2025-06-03 06:02:36,250 | INFO     | intersect: -303354086864.1228
[2025-06-03 02:02:57] 2025-06-03 06:02:36,250 | INFO     | chi2: 0.7474073762491698
[2025-06-03 02:02:57] 2025-06-03 06:02:36,250 | INFO     | -- intersect: -303354086864.1228
[2025-06-03 02:02:57] 2025-06-03 06:02:36,250 | INFO     | current memory leak: 173.45 B/s (using 48 data points, chi2=0.75)
[2025-06-03 02:02:57] 2025-06-03 06:02:36,250 | INFO     | ..............................
[2025-06-03 02:02:57] 2025-06-03 06:02:36,250 | INFO     | . Timing measurements:
[2025-06-03 02:02:57] 2025-06-03 06:02:36,250 | INFO     | . get job = 0 s
[2025-06-03 02:02:57] 2025-06-03 06:02:36,250 | INFO     | . initial setup = 2 s
[2025-06-03 02:02:57] 2025-06-03 06:02:36,250 | INFO     | . payload setup = 3 s
[2025-06-03 02:02:57] 2025-06-03 06:02:36,251 | INFO     | . stage-in = 0 s
[2025-06-03 02:02:57] 2025-06-03 06:02:36,251 | INFO     | . payload execution = 3347 s
[2025-06-03 02:02:57] 2025-06-03 06:02:36,251 | INFO     | . stage-out = 0 s
[2025-06-03 02:02:57] 2025-06-03 06:02:36,251 | INFO     | . log creation = 0 s
[2025-06-03 02:02:57] 2025-06-03 06:02:36,251 | INFO     | ..............................
[2025-06-03 02:02:57] 2025-06-03 06:02:36,304 | INFO     | 
[2025-06-03 02:02:57] 2025-06-03 06:02:36,305 | INFO     | job summary report
[2025-06-03 02:02:57] 2025-06-03 06:02:36,305 | INFO     | --------------------------------------------------
[2025-06-03 02:02:57] 2025-06-03 06:02:36,305 | INFO     | PanDA job id: 6677401586
[2025-06-03 02:02:57] 2025-06-03 06:02:36,305 | INFO     | task id: 45006595
[2025-06-03 02:02:57] 2025-06-03 06:02:36,305 | INFO     | errors: (none)
[2025-06-03 02:02:57] 2025-06-03 06:02:36,305 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 02:02:57] 2025-06-03 06:02:36,305 | INFO     | pilot state: finished 
[2025-06-03 02:02:57] 2025-06-03 06:02:36,305 | INFO     | transexitcode: 0
[2025-06-03 02:02:57] 2025-06-03 06:02:36,305 | INFO     | exeerrorcode: 0
[2025-06-03 02:02:57] 2025-06-03 06:02:36,305 | INFO     | exeerrordiag: 
[2025-06-03 02:02:57] 2025-06-03 06:02:36,305 | INFO     | exitcode: 0
[2025-06-03 02:02:57] 2025-06-03 06:02:36,305 | INFO     | exitmsg: OK
[2025-06-03 02:02:57] 2025-06-03 06:02:36,305 | INFO     | cpuconsumptiontime: 20133 s
[2025-06-03 02:02:57] 2025-06-03 06:02:36,305 | INFO     | nevents: 400
[2025-06-03 02:02:57] 2025-06-03 06:02:36,305 | INFO     | neventsw: 0
[2025-06-03 02:02:57] 2025-06-03 06:02:36,305 | INFO     | pid: 2728394
[2025-06-03 02:02:57] 2025-06-03 06:02:36,305 | INFO     | pgrp: 2728394
[2025-06-03 02:02:57] 2025-06-03 06:02:36,305 | INFO     | corecount: 8
[2025-06-03 02:02:57] 2025-06-03 06:02:36,305 | INFO     | event service: False
[2025-06-03 02:02:57] 2025-06-03 06:02:36,306 | INFO     | sizes: {0: 2405182, 3: 2405388, 11: 2405416, 3353: 2431068, 3354: 2440009, 3357: 2440065, 3361: 2440363}
[2025-06-03 02:02:57] 2025-06-03 06:02:36,306 | INFO     | --------------------------------------------------
[2025-06-03 02:02:57] 2025-06-03 06:02:36,306 | INFO     | 
[2025-06-03 02:02:57] 2025-06-03 06:02:36,306 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-06-03 02:02:57] 2025-06-03 06:02:36,324 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 02:02:57] 2025-06-03 06:02:36,324 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 02:02:57] 2025-06-03 06:02:36,324 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 02:02:57] 2025-06-03 06:02:36,324 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 02:02:57] 2025-06-03 06:02:36,324 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 02:02:57] 2025-06-03 06:02:36,324 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 02:02:57] 2025-06-03 06:02:36,325 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 02:02:57] 2025-06-03 06:02:36,325 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 02:02:57] 2025-06-03 06:02:36,325 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 02:02:57] 2025-06-03 06:02:36,325 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 02:02:57] 2025-06-03 06:02:36,325 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 02:02:57] 2025-06-03 06:02:36,325 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 02:02:57] 2025-06-03 06:02:36,325 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 02:02:57] 2025-06-03 06:02:36,325 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 02:02:57] 2025-06-03 06:02:36,325 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 02:02:57] 2025-06-03 06:02:36,325 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 02:02:57] 2025-06-03 06:02:36,325 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 02:02:57] 2025-06-03 06:02:36,325 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 02:02:57] 2025-06-03 06:02:36,325 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 02:02:57] 2025-06-03 06:02:36,325 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 02:02:57] 2025-06-03 06:02:36,325 | INFO     | job 6677401586 has completed (purged errors)
[2025-06-03 02:02:57] 2025-06-03 06:02:36,325 | INFO     | overall cleanup function is called
[2025-06-03 02:02:57] 2025-06-03 06:02:37,333 | INFO     | --- collectZombieJob: --- 10, [2728394]
[2025-06-03 02:02:57] 2025-06-03 06:02:37,333 | INFO     | zombie collector waiting for pid 2728394
[2025-06-03 02:02:57] 2025-06-03 06:02:37,333 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 02:02:57] 2025-06-03 06:02:37,333 | INFO     | collected zombie processes
[2025-06-03 02:02:57] 2025-06-03 06:02:37,333 | INFO     | will attempt to kill all subprocesses of pid=2728394
[2025-06-03 02:02:57] 2025-06-03 06:02:37,645 | INFO     | process IDs to be killed: [2728394] (in reverse order)
[2025-06-03 02:02:57] 2025-06-03 06:02:37,761 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 02:02:57] 2025-06-03 06:02:37,761 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 02:02:57] 2025-06-03 06:02:37,776 | INFO     | did not find any defunct processes belonging to 2728394
[2025-06-03 02:02:57] 2025-06-03 06:02:37,788 | INFO     | did not find any defunct processes belonging to 2728394
[2025-06-03 02:02:57] 2025-06-03 06:02:37,789 | INFO     | ready for new job
[2025-06-03 02:02:57] 2025-06-03 06:02:37,789 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 02:02:57] 2025-06-03 06:02:37,790 | INFO     | **************************************
[2025-06-03 02:02:57] 2025-06-03 06:02:37,790 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 02:02:57] 2025-06-03 06:02:37,790 | INFO     | **************************************
[2025-06-03 02:02:57] 2025-06-03 06:02:37,790 | INFO     | 
[2025-06-03 02:02:57] 2025-06-03 06:02:37,806 | INFO     | architecture information:
[2025-06-03 02:02:57] 2025-06-03 06:02:37,806 | INFO     | executing command: cat /etc/os-release
[2025-06-03 02:02:57] 2025-06-03 06:02:37,820 | INFO     | cat /etc/os-release:
[2025-06-03 02:02:57] NAME="CentOS Linux"
[2025-06-03 02:02:57] VERSION="7 (Core)"
[2025-06-03 02:02:57] ID="centos"
[2025-06-03 02:02:57] ID_LIKE="rhel fedora"
[2025-06-03 02:02:57] VERSION_ID="7"
[2025-06-03 02:02:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 02:02:57] ANSI_COLOR="0;31"
[2025-06-03 02:02:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 02:02:57] HOME_URL="https://www.centos.org/"
[2025-06-03 02:02:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 02:02:57] 
[2025-06-03 02:02:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 02:02:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 02:02:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 02:02:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 02:02:57] 
[2025-06-03 02:02:57] 2025-06-03 06:02:37,820 | INFO     | **************************************
[2025-06-03 02:02:57] 2025-06-03 06:02:38,321 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-06-03 02:02:57] 2025-06-03 06:02:38,345 | INFO     | sufficient remaining disk space (67408756736 B)
[2025-06-03 02:02:57] 2025-06-03 06:02:38,346 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 02:02:57] 2025-06-03 06:02:38,346 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 02:02:57] 2025-06-03 06:02:38,346 | INFO     | update_server=False
[2025-06-03 02:02:57] 2025-06-03 06:02:38,346 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 02:02:57] 2025-06-03 06:02:38,346 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 02:02:57] 2025-06-03 06:02:38,346 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 02:02:57] 2025-06-03 06:02:38,351 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 02:02:57] 2025-06-03 06:02:38,351 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 02:02:57] 2025-06-03 06:02:38,351 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 02:02:57] 2025-06-03 06:02:38,392 | INFO     | all payload control threads have been joined
[2025-06-03 02:02:57] 2025-06-03 06:02:38,802 | INFO     | all data control threads have been joined
[2025-06-03 02:02:57] 2025-06-03 06:02:39,133 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:02:57] 2025-06-03 06:02:39,133 | INFO     | aborting loop
[2025-06-03 02:02:57] 2025-06-03 06:02:39,351 | INFO     | [job] retrieve thread has finished
[2025-06-03 02:02:57] 2025-06-03 06:02:39,397 | INFO     | [payload] control thread has finished
[2025-06-03 02:02:57] 2025-06-03 06:02:39,692 | INFO     | [payload] failed_post thread has finished
[2025-06-03 02:02:57] 2025-06-03 06:02:39,711 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 02:02:57] 2025-06-03 06:02:39,719 | INFO     | all job control threads have been joined
[2025-06-03 02:02:57] 2025-06-03 06:02:39,807 | INFO     | [data] control thread has finished
[2025-06-03 02:02:57] 2025-06-03 06:02:39,902 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 02:02:57] 2025-06-03 06:02:40,107 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 02:02:57] 2025-06-03 06:02:40,138 | INFO     | [job] job monitor thread has finished
[2025-06-03 02:02:57] 2025-06-03 06:02:40,156 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 02:02:57] 2025-06-03 06:02:40,219 | INFO     | [job] validate thread has finished
[2025-06-03 02:02:57] 2025-06-03 06:02:40,524 | INFO     | [data] copytool_in thread has finished
[2025-06-03 02:02:57] 2025-06-03 06:02:40,653 | INFO     | [payload] validate_post thread has finished
[2025-06-03 02:02:57] 2025-06-03 06:02:40,724 | INFO     | [job] control thread has finished
[2025-06-03 02:02:57] 2025-06-03 06:02:41,314 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:02:57] 2025-06-03 06:02:41,716 | INFO     | [data] copytool_out thread has finished
[2025-06-03 02:02:57] 2025-06-03 06:02:42,319 | INFO     | [job] queue monitor thread has finished
[2025-06-03 02:02:57] 2025-06-03 06:02:42,348 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 02:02:57] 2025-06-03 06:02:49,286 | INFO     | job.realtimelogging is not enabled
[2025-06-03 02:02:57] 2025-06-03 06:02:50,292 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 02:02:57] 2025-06-03 06:02:52,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140309984479040)>', '<ExcThread(monitor, started 140309098903296)>']
[2025-06-03 02:02:57] 2025-06-03 06:02:52,420 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 02:02:57] 2025-06-03 06:02:52,421 | INFO     | [monitor] control thread has ended
[2025-06-03 02:02:57] 2025-06-03 06:02:57,090 | INFO     | all workflow threads have been joined
[2025-06-03 02:02:57] 2025-06-03 06:02:57,090 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 02:02:57] 2025-06-03 06:02:57,091 | INFO     | traces error code: 0
[2025-06-03 02:02:57] 2025-06-03 06:02:57,091 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 02:02:57] 2025-06-03 06:02:57,179 [wrapper] ==== pilot stdout END ====
[2025-06-03 02:02:57] 2025-06-03 06:02:57,182 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 02:02:57] 2025-06-03 06:02:57,184 [wrapper] pilotpid: 2713186
[2025-06-03 02:02:57] 2025-06-03 06:02:57,185 [wrapper] Pilot exit status: 0
[2025-06-03 02:02:57] 2025-06-03 06:02:57,193 [wrapper] pandaids: 6677401586
[2025-06-03 02:02:57] 2025-06-03 06:02:57,276 [wrapper] cleanup supervisor_pilot 2952279 2713188
[2025-06-03 02:02:57] 2025-06-03 06:02:57,278 [wrapper] Test setup, not cleaning
[2025-06-03 02:02:57] 2025-06-03 06:02:57,281 [wrapper] apfmon messages muted
[2025-06-03 02:02:57] 2025-06-03 06:02:57,282 [wrapper] ==== wrapper stdout END ====
[2025-06-03 02:02:57] 2025-06-03 06:02:57,284 [wrapper] ==== wrapper stderr END ====
[2025-06-03 02:02:57]  *** Error codes and diagnostics ***
[2025-06-03 02:02:57]     "exeErrorCode": 0,
[2025-06-03 02:02:57]     "exeErrorDiag": "",
[2025-06-03 02:02:57]     "pilotErrorCode": 0,
[2025-06-03 02:02:57]     "pilotErrorDiag": "",
[2025-06-03 02:02:57]  *** Listing of results directory ***
[2025-06-03 02:02:57] total 392884
[2025-06-03 02:02:57] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 17:10 pilot3.tar.gz
[2025-06-03 02:02:57] -rwx------. 1 boincer umatlas     37140 Jun  2 17:24 runpilot2-wrapper.sh
[2025-06-03 02:02:57] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 17:24 queuedata.json
[2025-06-03 02:02:57] -rw-r--r--. 1 boincer umatlas       100 Jun  3 01:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 02:02:57] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 01:06 run_atlas
[2025-06-03 02:02:57] -rw-r--r--. 1 boincer umatlas       105 Jun  3 01:06 job.xml
[2025-06-03 02:02:57] -rw-r--r--. 2 boincer umatlas 213442155 Jun  3 01:06 EVNT.45006593._000490.pool.root.1
[2025-06-03 02:02:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 01:06 start_atlas.sh
[2025-06-03 02:02:57] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 01:06 shared
[2025-06-03 02:02:57] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 01:06 input.tar.gz
[2025-06-03 02:02:57] -rw-r--r--. 1 boincer umatlas         0 Jun  3 01:06 boinc_lockfile
[2025-06-03 02:02:57] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 01:06 pandaJob.out
[2025-06-03 02:02:57] -rw-------. 1 boincer umatlas    988081 Jun  3 01:06 agis_schedconf.cvmfs.json
[2025-06-03 02:02:57] -rw-------. 1 boincer umatlas   1603667 Jun  3 01:06 agis_ddmendpoints.agis.ALL.json
[2025-06-03 02:02:57] drwx------. 4 boincer umatlas      4096 Jun  3 01:06 pilot3
[2025-06-03 02:02:57] -rw-r--r--. 1 boincer umatlas      7161 Jun  3 02:00 init_data.xml
[2025-06-03 02:02:57] -rw-------. 1 boincer umatlas 183761041 Jun  3 02:02 HITS.45006595._012240.pool.root.1
[2025-06-03 02:02:57] -rw-r--r--. 1 boincer umatlas       529 Jun  3 02:02 boinc_task_state.xml
[2025-06-03 02:02:57] -rw-------. 1 boincer umatlas        95 Jun  3 02:02 pilot_heartbeat.json
[2025-06-03 02:02:57] -rw-------. 1 boincer umatlas      1029 Jun  3 02:02 memory_monitor_summary.json
[2025-06-03 02:02:57] -rw-------. 1 boincer umatlas    293207 Jun  3 02:02 log.45006595._012240.job.log.tgz.1
[2025-06-03 02:02:57] -rw-------. 1 boincer umatlas      7686 Jun  3 02:02 heartbeat.json
[2025-06-03 02:02:57] -rw-r--r--. 1 boincer umatlas        27 Jun  3 02:02 wrapper_checkpoint.txt
[2025-06-03 02:02:57] -rw-------. 1 boincer umatlas      4548 Jun  3 02:02 pilotlog.txt
[2025-06-03 02:02:57] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 02:02 boinc_mmap_file
[2025-06-03 02:02:57] -rw-------. 1 boincer umatlas    342517 Jun  3 02:02 log.45006595._012240.job.log.1
[2025-06-03 02:02:57] -rw-------. 1 boincer umatlas       357 Jun  3 02:02 output.list
[2025-06-03 02:02:57] -rw-r--r--. 1 boincer umatlas       620 Jun  3 02:02 runtime_log
[2025-06-03 02:02:57] -rw-------. 1 boincer umatlas    655360 Jun  3 02:02 result.tar.gz
[2025-06-03 02:02:57] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 02:02 runtime_log.err
[2025-06-03 02:02:57] -rw-------. 1 boincer umatlas       650 Jun  3 02:02 iy3KDmEpRg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrmgKDmL0i91m.diag
[2025-06-03 02:02:57] -rw-r--r--. 1 boincer umatlas     21563 Jun  3 02:02 stderr.txt
[2025-06-03 02:02:57] HITS file was successfully produced:
[2025-06-03 02:02:57] -rw-------. 1 boincer umatlas 183761041 Jun  3 02:02 shared/HITS.pool.root.1
[2025-06-03 02:02:57]  *** Contents of shared directory: ***
[2025-06-03 02:02:57] total 389060
[2025-06-03 02:02:57] -rw-r--r--. 2 boincer umatlas 213442155 Jun  3 01:06 ATLAS.root_0
[2025-06-03 02:02:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 01:06 start_atlas.sh
[2025-06-03 02:02:57] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 01:06 input.tar.gz
[2025-06-03 02:02:57] -rw-------. 1 boincer umatlas 183761041 Jun  3 02:02 HITS.pool.root.1
[2025-06-03 02:02:57] -rw-------. 1 boincer umatlas    655360 Jun  3 02:02 result.tar.gz
02:02:58 (2704444): run_atlas exited; CPU time 20198.585623
02:02:58 (2704444): called boinc_finish(0)

</stderr_txt>
]]>

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