Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:05:28 (1794953): wrapper (7.7.26015): starting
21:05:28 (1794953): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 21:05:28] Arguments: --nthreads 4
[2025-06-04 21:05:28] Threads: 4
[2025-06-04 21:05:28] Checking for CVMFS
[2025-06-04 21:05:28] No cvmfs_config command found, will try listing directly
[2025-06-04 21:05:28] CVMFS is ok
[2025-06-04 21:05:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 21:05:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 21:05:28] Further information can be found at the LHC@home message board.
[2025-06-04 21:05:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:05:28] Checking for apptainer binary...
[2025-06-04 21:05:28] which: no apptainer in ((null))
[2025-06-04 21:05:28] apptainer is not installed, using version from CVMFS
[2025-06-04 21:05:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:05:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-06-04 21:05:28] apptainer works
[2025-06-04 21:05:28] Set ATHENA_PROC_NUMBER=4
[2025-06-04 21:05:28] Set ATHENA_CORE_NUMBER=4
[2025-06-04 21:05:28] Starting ATLAS job with PandaID=6677401545
[2025-06-04 21:05:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:44:29]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:44:29] 2025-06-04 21:43:18,187 | INFO     | chi2: 2.415452479973668
[2025-06-04 23:44:29] 2025-06-04 21:43:18,188 | INFO     | sum of square deviations: 1046484737.5
[2025-06-04 23:44:29] 2025-06-04 21:43:18,189 | INFO     | sum of deviations: 25006866125.0
[2025-06-04 23:44:29] 2025-06-04 21:43:18,189 | INFO     | mean x: 1749068511.5
[2025-06-04 23:44:29] 2025-06-04 21:43:18,189 | INFO     | mean y: 2293423.986666667
[2025-06-04 23:44:29] 2025-06-04 21:43:18,189 | INFO     | -- intersect: -41793559437.6835
[2025-06-04 23:44:29] 2025-06-04 21:43:18,190 | INFO     | intersect: -41793559437.6835
[2025-06-04 23:44:29] 2025-06-04 21:43:18,190 | INFO     | chi2: 1.6433033392012901
[2025-06-04 23:44:29] 2025-06-04 21:43:18,190 | INFO     | current chi2=1.6433033392012901 (change=31.967059885226785 %)
[2025-06-04 23:44:29] 2025-06-04 21:43:18,190 | INFO     | sum of square deviations: 945282840.0
[2025-06-04 23:44:29] 2025-06-04 21:43:18,191 | INFO     | sum of deviations: 23941158793.000004
[2025-06-04 23:44:29] 2025-06-04 21:43:18,191 | INFO     | mean x: 1749068359.0
[2025-06-04 23:44:29] 2025-06-04 21:43:18,191 | INFO     | mean y: 2291818.1379310344
[2025-06-04 23:44:29] 2025-06-04 21:43:18,191 | INFO     | -- intersect: -44296326067.09834
[2025-06-04 23:44:29] 2025-06-04 21:43:18,192 | INFO     | intersect: -44296326067.09834
[2025-06-04 23:44:29] 2025-06-04 21:43:18,192 | INFO     | chi2: 1.6449738258409374
[2025-06-04 23:44:29] 2025-06-04 21:43:18,192 | INFO     | current chi2=1.6449738258409374 (change=-0.10165418640597593 %)
[2025-06-04 23:44:29] 2025-06-04 21:43:18,192 | INFO     | right removable region: 144
[2025-06-04 23:44:29] 2025-06-04 21:43:18,192 | INFO     | sum of square deviations: 1046484737.5
[2025-06-04 23:44:29] 2025-06-04 21:43:18,193 | INFO     | sum of deviations: -8161189634.0
[2025-06-04 23:44:29] 2025-06-04 21:43:18,194 | INFO     | mean x: 1749068816.5
[2025-06-04 23:44:29] 2025-06-04 21:43:18,194 | INFO     | mean y: 2315686.053333333
[2025-06-04 23:44:29] 2025-06-04 21:43:18,194 | INFO     | -- intersect: 13642727039.279064
[2025-06-04 23:44:29] 2025-06-04 21:43:18,194 | INFO     | intersect: 13642727039.279064
[2025-06-04 23:44:29] 2025-06-04 21:43:18,194 | INFO     | chi2: 0.8065061987059021
[2025-06-04 23:44:29] 2025-06-04 21:43:18,194 | INFO     | current chi2=0.8065061987059021 (change=66.61055411387376 %)
[2025-06-04 23:44:29] 2025-06-04 21:43:18,195 | INFO     | sum of square deviations: 945282840.0
[2025-06-04 23:44:29] 2025-06-04 21:43:18,195 | INFO     | sufficient remaining disk space (649063301120 B)
[2025-06-04 23:44:29] 2025-06-04 21:43:18,196 | INFO     | sum of deviations: -7167455043.0
[2025-06-04 23:44:29] 2025-06-04 21:43:18,196 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 23:44:29] 2025-06-04 21:43:18,197 | INFO     | mean x: 1749068969.0
[2025-06-04 23:44:29] 2025-06-04 21:43:18,197 | INFO     | mean y: 2314219.151724138
[2025-06-04 23:44:29] 2025-06-04 21:43:18,197 | INFO     | -- intersect: 13264348260.110153
[2025-06-04 23:44:29] 2025-06-04 21:43:18,197 | INFO     | intersect: 13264348260.110153
[2025-06-04 23:44:29] 2025-06-04 21:43:18,197 | INFO     | chi2: 0.8027257665964923
[2025-06-04 23:44:29] 2025-06-04 21:43:18,198 | INFO     | current chi2=0.8027257665964923 (change=0.4687418541203766 %)
[2025-06-04 23:44:29] 2025-06-04 21:43:18,198 | INFO     | left removable region: 20
[2025-06-04 23:44:29] 2025-06-04 21:43:18,198 | INFO     | sum of square deviations: 591173875.0
[2025-06-04 23:44:29] 2025-06-04 21:43:18,199 | INFO     | sum of deviations: 554105456.0000001
[2025-06-04 23:44:29] 2025-06-04 21:43:18,199 | INFO     | mean x: 1749068938.5
[2025-06-04 23:44:29] 2025-06-04 21:43:18,199 | INFO     | mean y: 2329137.9838709678
[2025-06-04 23:44:29] 2025-06-04 21:43:18,199 | INFO     | -- intersect: -1637067802.1176832
[2025-06-04 23:44:29] 2025-06-04 21:43:18,199 | INFO     | intersect: -1637067802.1176832
[2025-06-04 23:44:29] 2025-06-04 21:43:18,200 | INFO     | chi2: 0.00024148990536145267
[2025-06-04 23:44:29] 2025-06-04 21:43:18,200 | INFO     | -- intersect: -1637067802.1176832
[2025-06-04 23:44:29] 2025-06-04 21:43:18,200 | INFO     | current memory leak: 0.94 B/s (using 124 data points, chi2=0.00)
[2025-06-04 23:44:29] 2025-06-04 21:43:18,201 | INFO     | ..............................
[2025-06-04 23:44:29] 2025-06-04 21:43:18,201 | INFO     | . Timing measurements:
[2025-06-04 23:44:29] 2025-06-04 21:43:18,201 | INFO     | . get job = 0 s
[2025-06-04 23:44:29] 2025-06-04 21:43:18,201 | INFO     | . initial setup = 1 s
[2025-06-04 23:44:29] 2025-06-04 21:43:18,202 | INFO     | . payload setup = 7 s
[2025-06-04 23:44:29] 2025-06-04 21:43:18,202 | INFO     | . stage-in = 0 s
[2025-06-04 23:44:29] 2025-06-04 21:43:18,202 | INFO     | . payload execution = 9423 s
[2025-06-04 23:44:29] 2025-06-04 21:43:18,202 | INFO     | . stage-out = 0 s
[2025-06-04 23:44:29] 2025-06-04 21:43:18,202 | INFO     | . log creation = 0 s
[2025-06-04 23:44:29] 2025-06-04 21:43:18,202 | INFO     | ..............................
[2025-06-04 23:44:29] 2025-06-04 21:43:18,250 | INFO     | size of work directory /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6677401545: 3086021 B (within 2537553920 B limit)
[2025-06-04 23:44:29] 2025-06-04 21:43:18,265 | INFO     | pfn file=/scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6677401545/HITS.45006595._012199.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 23:44:29] 2025-06-04 21:43:18,276 | INFO     | total size of present files: 0 B (workdir size: 3086021 B)
[2025-06-04 23:44:29] 2025-06-04 21:43:18,298 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6677401545/HITS.45006595._012199.pool.root.1 since it does not exist
[2025-06-04 23:44:29] 2025-06-04 21:43:18,687 | INFO     | number of running child processes to parent process 1805617: 1
[2025-06-04 23:44:29] 2025-06-04 21:43:18,687 | INFO     | maximum number of monitored processes: 6
[2025-06-04 23:44:29] 2025-06-04 21:43:18,687 | INFO     | aborting job monitoring since job object (job id=6677401545) has expired
[2025-06-04 23:44:29] 2025-06-04 21:43:18,771 | INFO     | 
[2025-06-04 23:44:29] 2025-06-04 21:43:18,772 | INFO     | job summary report
[2025-06-04 23:44:29] 2025-06-04 21:43:18,772 | INFO     | --------------------------------------------------
[2025-06-04 23:44:29] 2025-06-04 21:43:18,772 | INFO     | PanDA job id: 6677401545
[2025-06-04 23:44:29] 2025-06-04 21:43:18,772 | INFO     | task id: 45006595
[2025-06-04 23:44:29] 2025-06-04 21:43:18,772 | INFO     | errors: (none)
[2025-06-04 23:44:29] 2025-06-04 21:43:18,772 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:44:29] 2025-06-04 21:43:18,772 | INFO     | pilot state: finished 
[2025-06-04 23:44:29] 2025-06-04 21:43:18,772 | INFO     | transexitcode: 0
[2025-06-04 23:44:29] 2025-06-04 21:43:18,773 | INFO     | exeerrorcode: 0
[2025-06-04 23:44:29] 2025-06-04 21:43:18,773 | INFO     | exeerrordiag: 
[2025-06-04 23:44:29] 2025-06-04 21:43:18,773 | INFO     | exitcode: 0
[2025-06-04 23:44:29] 2025-06-04 21:43:18,773 | INFO     | exitmsg: OK
[2025-06-04 23:44:29] 2025-06-04 21:43:18,773 | INFO     | cpuconsumptiontime: 36343 s
[2025-06-04 23:44:29] 2025-06-04 21:43:18,773 | INFO     | nevents: 400
[2025-06-04 23:44:29] 2025-06-04 21:43:18,773 | INFO     | neventsw: 0
[2025-06-04 23:44:29] 2025-06-04 21:43:18,773 | INFO     | pid: 1805617
[2025-06-04 23:44:29] 2025-06-04 21:43:18,773 | INFO     | pgrp: 1805617
[2025-06-04 23:44:29] 2025-06-04 21:43:18,773 | INFO     | corecount: 4
[2025-06-04 23:44:29] 2025-06-04 21:43:18,773 | INFO     | event service: False
[2025-06-04 23:44:29] 2025-06-04 21:43:18,773 | INFO     | sizes: {0: 2397351, 5: 2397557, 11: 2397613, 9434: 2425877, 9436: 2434840, 9438: 2434896, 9443: 2435222}
[2025-06-04 23:44:29] 2025-06-04 21:43:18,773 | INFO     | --------------------------------------------------
[2025-06-04 23:44:29] 2025-06-04 21:43:18,774 | INFO     | 
[2025-06-04 23:44:29] 2025-06-04 21:43:18,774 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-06-04 23:44:29] 2025-06-04 21:43:18,794 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:44:29] 2025-06-04 21:43:18,794 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:44:29] 2025-06-04 21:43:18,794 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:44:29] 2025-06-04 21:43:18,794 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:44:29] 2025-06-04 21:43:18,794 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:44:29] 2025-06-04 21:43:18,795 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:44:29] 2025-06-04 21:43:18,795 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:44:29] 2025-06-04 21:43:18,795 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:44:29] 2025-06-04 21:43:18,795 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:44:29] 2025-06-04 21:43:18,795 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:44:29] 2025-06-04 21:43:18,795 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:44:29] 2025-06-04 21:43:18,795 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:44:29] 2025-06-04 21:43:18,795 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:44:29] 2025-06-04 21:43:18,795 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:44:29] 2025-06-04 21:43:18,795 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:44:29] 2025-06-04 21:43:18,796 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:44:29] 2025-06-04 21:43:18,796 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:44:29] 2025-06-04 21:43:18,796 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:44:29] 2025-06-04 21:43:18,796 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:44:29] 2025-06-04 21:43:18,796 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:44:29] 2025-06-04 21:43:18,796 | INFO     | job 6677401545 has completed (purged errors)
[2025-06-04 23:44:29] 2025-06-04 21:43:18,796 | INFO     | overall cleanup function is called
[2025-06-04 23:44:29] 2025-06-04 21:43:19,549 | INFO     | PID=1798628 has CPU usage=15.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 23:44:29] 2025-06-04 21:43:19,549 | INFO     | .. there are 7 such processes running
[2025-06-04 23:44:29] 2025-06-04 21:43:19,804 | INFO     | --- collectZombieJob: --- 10, [1805617]
[2025-06-04 23:44:29] 2025-06-04 21:43:19,805 | INFO     | zombie collector waiting for pid 1805617
[2025-06-04 23:44:29] 2025-06-04 21:43:19,805 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:44:29] 2025-06-04 21:43:19,805 | INFO     | collected zombie processes
[2025-06-04 23:44:29] 2025-06-04 21:43:19,805 | INFO     | will attempt to kill all subprocesses of pid=1805617
[2025-06-04 23:44:29] 2025-06-04 21:43:20,178 | INFO     | process IDs to be killed: [1805617] (in reverse order)
[2025-06-04 23:44:29] 2025-06-04 21:43:20,289 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:44:29] 2025-06-04 21:43:20,290 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:44:29] 2025-06-04 21:43:20,301 | INFO     | did not find any defunct processes belonging to 1805617
[2025-06-04 23:44:29] 2025-06-04 21:43:20,313 | INFO     | did not find any defunct processes belonging to 1805617
[2025-06-04 23:44:29] 2025-06-04 21:43:20,313 | INFO     | ready for new job
[2025-06-04 23:44:29] 2025-06-04 21:43:20,313 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:44:29] 2025-06-04 21:43:20,315 | INFO     | **************************************
[2025-06-04 23:44:29] 2025-06-04 21:43:20,315 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:44:29] 2025-06-04 21:43:20,315 | INFO     | **************************************
[2025-06-04 23:44:29] 2025-06-04 21:43:20,315 | INFO     | 
[2025-06-04 23:44:29] 2025-06-04 21:43:20,319 | INFO     | architecture information:
[2025-06-04 23:44:29] 2025-06-04 21:43:20,320 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:44:29] 2025-06-04 21:43:20,335 | INFO     | cat /etc/os-release:
[2025-06-04 23:44:29] NAME="CentOS Linux"
[2025-06-04 23:44:29] VERSION="7 (Core)"
[2025-06-04 23:44:29] ID="centos"
[2025-06-04 23:44:29] ID_LIKE="rhel fedora"
[2025-06-04 23:44:29] VERSION_ID="7"
[2025-06-04 23:44:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:44:29] ANSI_COLOR="0;31"
[2025-06-04 23:44:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:44:29] HOME_URL="https://www.centos.org/"
[2025-06-04 23:44:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:44:29] 
[2025-06-04 23:44:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:44:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:44:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:44:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:44:29] 
[2025-06-04 23:44:29] 2025-06-04 21:43:20,336 | INFO     | **************************************
[2025-06-04 23:44:29] 2025-06-04 21:43:20,839 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-06-04 23:44:29] 2025-06-04 21:43:20,855 | INFO     | sufficient remaining disk space (649065398272 B)
[2025-06-04 23:44:29] 2025-06-04 21:43:20,855 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:44:29] 2025-06-04 21:43:20,856 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:44:29] 2025-06-04 21:43:20,856 | INFO     | update_server=False
[2025-06-04 23:44:29] 2025-06-04 21:43:20,856 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:44:29] 2025-06-04 21:43:21,190 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 23:44:29] 2025-06-04 21:43:21,190 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 23:44:29] 2025-06-04 21:43:21,191 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:44:29] 2025-06-04 21:43:21,191 | INFO     | will abort loop
[2025-06-04 23:44:29] 2025-06-04 21:43:21,490 | INFO     | all payload control threads have been joined
[2025-06-04 23:44:29] 2025-06-04 21:43:21,555 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:44:29] 2025-06-04 21:43:21,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:44:29] 2025-06-04 21:43:21,555 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:44:29] 2025-06-04 21:43:21,594 | INFO     | all data control threads have been joined
[2025-06-04 23:44:29] 2025-06-04 21:43:21,607 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:44:29] 2025-06-04 21:43:21,861 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:44:29] 2025-06-04 21:43:21,962 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:44:29] 2025-06-04 21:43:21,963 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:44:29] 2025-06-04 21:43:22,196 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:44:29] 2025-06-04 21:43:22,199 | INFO     | all job control threads have been joined
[2025-06-04 23:44:29] 2025-06-04 21:43:22,496 | INFO     | [payload] control thread has finished
[2025-06-04 23:44:29] 2025-06-04 21:43:22,600 | INFO     | [data] control thread has finished
[2025-06-04 23:44:29] 2025-06-04 21:43:22,666 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:44:29] 2025-06-04 21:43:22,739 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:44:29] 2025-06-04 21:43:22,903 | INFO     | [job] validate thread has finished
[2025-06-04 23:44:29] 2025-06-04 21:43:23,204 | INFO     | [job] control thread has finished
[2025-06-04 23:44:29] 2025-06-04 21:43:23,245 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:44:29] 2025-06-04 21:43:23,284 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:44:29] 2025-06-04 21:43:23,326 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:44:29] 2025-06-04 21:43:23,613 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:44:29] 2025-06-04 21:43:23,823 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:44:29] 2025-06-04 21:43:24,331 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:44:29] 2025-06-04 21:43:27,828 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:44:29] 2025-06-04 21:43:31,017 | INFO     | job.realtimelogging is not enabled
[2025-06-04 23:44:29] 2025-06-04 21:43:32,022 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:44:29] 2025-06-04 21:43:32,138 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23003561174848)>', '<ExcThread(monitor, started 23003318408960)>']
[2025-06-04 23:44:29] 2025-06-04 21:43:32,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:44:29] 2025-06-04 21:43:32,603 | INFO     | [monitor] control thread has ended
[2025-06-04 23:44:29] 2025-06-04 21:43:37,163 | INFO     | all workflow threads have been joined
[2025-06-04 23:44:29] 2025-06-04 21:43:37,164 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:44:29] 2025-06-04 21:43:37,164 | INFO     | traces error code: 0
[2025-06-04 23:44:29] 2025-06-04 21:43:37,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:44:29] 2025-06-04 21:43:37,328 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:44:29] 2025-06-04 21:43:37,331 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:44:29] 2025-06-04 21:43:37,334 [wrapper] pilotpid: 1798628
[2025-06-04 23:44:29] 2025-06-04 21:43:37,337 [wrapper] Pilot exit status: 0
[2025-06-04 23:44:29] 2025-06-04 21:43:37,349 [wrapper] pandaids: 6677401545
[2025-06-04 23:44:29] 2025-06-04 21:43:37,416 [wrapper] cleanup supervisor_pilot 2085363 1798629
[2025-06-04 23:44:29] 2025-06-04 21:43:37,419 [wrapper] Test setup, not cleaning
[2025-06-04 23:44:29] 2025-06-04 21:43:37,422 [wrapper] apfmon messages muted
[2025-06-04 23:44:29] 2025-06-04 21:43:37,424 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:44:29] 2025-06-04 21:43:37,427 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:44:29]  *** Error codes and diagnostics ***
[2025-06-04 23:44:29]     "exeErrorCode": 0,
[2025-06-04 23:44:29]     "exeErrorDiag": "",
[2025-06-04 23:44:29]     "pilotErrorCode": 0,
[2025-06-04 23:44:29]     "pilotErrorDiag": "",
[2025-06-04 23:44:29]  *** Listing of results directory ***
[2025-06-04 23:44:29] total 397324
[2025-06-04 23:44:29] -rw-r--r-- 1 boinc boinc    495897 Jun  2 23:10 pilot3.tar.gz
[2025-06-04 23:44:29] -rwx------ 1 boinc boinc     37140 Jun  2 23:22 runpilot2-wrapper.sh
[2025-06-04 23:44:29] -rw-r--r-- 1 boinc boinc      5111 Jun  2 23:22 queuedata.json
[2025-06-04 23:44:29] -rw-r--r-- 1 boinc boinc       100 Jun  4 21:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:44:29] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 21:05 run_atlas
[2025-06-04 23:44:29] -rw-r--r-- 1 boinc boinc       105 Jun  4 21:05 job.xml
[2025-06-04 23:44:29] -rw-r--r-- 2 boinc boinc 215638883 Jun  4 21:05 EVNT.45006593._000488.pool.root.1
[2025-06-04 23:44:29] -rw-r--r-- 1 boinc boinc      6634 Jun  4 21:05 init_data.xml
[2025-06-04 23:44:29] -rw-r--r-- 2 boinc boinc     15093 Jun  4 21:05 start_atlas.sh
[2025-06-04 23:44:29] drwxrwx--x 2 boinc boinc      4096 Jun  4 21:05 shared
[2025-06-04 23:44:29] -rw-r--r-- 2 boinc boinc    508875 Jun  4 21:05 input.tar.gz
[2025-06-04 23:44:29] -rw-r--r-- 1 boinc boinc         0 Jun  4 21:05 boinc_lockfile
[2025-06-04 23:44:29] -rw-r--r-- 1 boinc boinc      2524 Jun  4 21:05 pandaJob.out
[2025-06-04 23:44:29] -rw------- 1 boinc boinc    990984 Jun  4 21:05 agis_schedconf.cvmfs.json
[2025-06-04 23:44:29] -rw------- 1 boinc boinc   1598969 Jun  4 21:05 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:44:29] drwx------ 4 boinc boinc      4096 Jun  4 21:05 pilot3
[2025-06-04 23:44:29] -rw------- 1 boinc boinc 184968364 Jun  4 23:42 HITS.45006595._012199.pool.root.1
[2025-06-04 23:44:29] -rw-r--r-- 1 boinc boinc       528 Jun  4 23:42 boinc_task_state.xml
[2025-06-04 23:44:29] -rw------- 1 boinc boinc      1034 Jun  4 23:43 memory_monitor_summary.json
[2025-06-04 23:44:29] -rw------- 1 boinc boinc        95 Jun  4 23:43 pilot_heartbeat.json
[2025-06-04 23:44:29] -rw------- 1 boinc boinc    304983 Jun  4 23:43 log.45006595._012199.job.log.tgz.1
[2025-06-04 23:44:29] -rw------- 1 boinc boinc      7717 Jun  4 23:43 heartbeat.json
[2025-06-04 23:44:29] -rw------- 1 boinc boinc      4621 Jun  4 23:43 pilotlog.txt
[2025-06-04 23:44:29] -rw------- 1 boinc boinc    900866 Jun  4 23:43 log.45006595._012199.job.log.1
[2025-06-04 23:44:29] -rw------- 1 boinc boinc       357 Jun  4 23:43 output.list
[2025-06-04 23:44:29] -rw-r--r-- 1 boinc boinc       620 Jun  4 23:43 runtime_log
[2025-06-04 23:44:29] -rw------- 1 boinc boinc   1228800 Jun  4 23:43 result.tar.gz
[2025-06-04 23:44:29] -rw------- 1 boinc boinc       662 Jun  4 23:43 u8hNDmVnRg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm2eWKDmEYVGSn.diag
[2025-06-04 23:44:29] -rw-r--r-- 1 boinc boinc      9025 Jun  4 23:43 runtime_log.err
[2025-06-04 23:44:29] -rw-r--r-- 1 boinc boinc        26 Jun  4 23:44 wrapper_checkpoint.txt
[2025-06-04 23:44:29] -rw-r--r-- 1 boinc boinc      8192 Jun  4 23:44 boinc_mmap_file
[2025-06-04 23:44:29] -rw-r--r-- 1 boinc boinc     21165 Jun  4 23:44 stderr.txt
[2025-06-04 23:44:29] HITS file was successfully produced:
[2025-06-04 23:44:29] -rw------- 1 boinc boinc 184968364 Jun  4 23:42 shared/HITS.pool.root.1
[2025-06-04 23:44:29]  *** Contents of shared directory: ***
[2025-06-04 23:44:29] total 392948
[2025-06-04 23:44:29] -rw-r--r-- 2 boinc boinc 215638883 Jun  4 21:05 ATLAS.root_0
[2025-06-04 23:44:29] -rw-r--r-- 2 boinc boinc     15093 Jun  4 21:05 start_atlas.sh
[2025-06-04 23:44:29] -rw-r--r-- 2 boinc boinc    508875 Jun  4 21:05 input.tar.gz
[2025-06-04 23:44:29] -rw------- 1 boinc boinc 184968364 Jun  4 23:42 HITS.pool.root.1
[2025-06-04 23:44:29] -rw------- 1 boinc boinc   1228800 Jun  4 23:43 result.tar.gz
23:44:30 (1794953): run_atlas exited; CPU time 36705.177039
23:44:30 (1794953): called boinc_finish(0)

</stderr_txt>
]]>

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