Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:03:06 (2765208): wrapper (7.7.26015): starting
01:03:06 (2765208): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 01:03:06] Arguments: --nthreads 8
[2025-06-03 01:03:06] Threads: 8
[2025-06-03 01:03:06] Checking for CVMFS
[2025-06-03 01:03:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 01:03:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 01:03:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 01:03:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 01:03:06] 2.12.6.0 2291867 21380 278376 146730 2 194 29689027 40960001 5557 16776704 0 66684595 99.739 60345825 30950 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 01:03:06] CVMFS is ok
[2025-06-03 01:03:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 01:03:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 01:03:06] Further information can be found at the LHC@home message board.
[2025-06-03 01:03:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 01:03:06] Checking for apptainer binary...
[2025-06-03 01:03:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 01:03:06] Running /usr/bin/apptainer --version
[2025-06-03 01:03:06] apptainer version 1.4.1-1.el9
[2025-06-03 01:03:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 01:03:07] c6-8-12-1.aglt2.org
[2025-06-03 01:03:07] apptainer works
[2025-06-03 01:03:07] Set ATHENA_PROC_NUMBER=8
[2025-06-03 01:03:07] Set ATHENA_CORE_NUMBER=8
[2025-06-03 01:03:07] Starting ATLAS job with PandaID=6677401516
[2025-06-03 01:03:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 02:13:00]  *** The last 200 lines of the pilot log: ***
[2025-06-03 02:13:00]  is_altstaged=None
[2025-06-03 02:13:00]  is_tar=False
[2025-06-03 02:13:00]  lfn=log.45006595._012170.job.log.tgz.1
[2025-06-03 02:13:00]  mtime=0
[2025-06-03 02:13:00]  protocol_id=None
[2025-06-03 02:13:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 02:13:00]  replicas=None
[2025-06-03 02:13:00]  scope=mc23_13p6TeV
[2025-06-03 02:13:00]  status=None
[2025-06-03 02:13:00]  status_code=0
[2025-06-03 02:13:00]  storage_token=
[2025-06-03 02:13:00]  surl=/tmp/boinchome/slots/6/PanDA_Pilot-6677401516/log.45006595._012170.job.log.tgz.1
[2025-06-03 02:13:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/63/log.45006595._012170.job.log.tgz.1
[2025-06-03 02:13:00]  workdir=None
[2025-06-03 02:13:00] ]
[2025-06-03 02:13:00] 2025-06-03 06:12:34,309 | INFO     | transferring file log.45006595._012170.job.log.tgz.1 from /tmp/boinchome/slots/6/PanDA_Pilot-6677401516/log.45006595._012170.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 02:13:00] 2025-06-03 06:12:34,309 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/6/PanDA_Pilot-6677401516/log.45006595._012170.job.log.tgz.1 /tmp/boinchome/slots/6/log.45006595._012170.job
[2025-06-03 02:13:00] 2025-06-03 06:12:34,324 | INFO     | adding to output.list: log.45006595._012170.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/63/log.45006595._012170.job.log.tg
[2025-06-03 02:13:00] 2025-06-03 06:12:34,325 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 02:13:00] 2025-06-03 06:12:34,325 | INFO     | summary of transferred files:
[2025-06-03 02:13:00] 2025-06-03 06:12:34,325 | INFO     |  -- lfn=log.45006595._012170.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 02:13:00] 2025-06-03 06:12:34,326 | INFO     | stage-out finished correctly
[2025-06-03 02:13:00] 2025-06-03 06:12:35,709 | INFO     | monitor loop #310: job 0:6677401516 is in state 'finished'
[2025-06-03 02:13:00] 2025-06-03 06:12:35,710 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 02:13:00] 2025-06-03 06:12:36,094 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 02:13:00] 2025-06-03 06:12:37,457 | INFO     | job 6677401516 has state=finished
[2025-06-03 02:13:00] 2025-06-03 06:12:37,457 | INFO     | preparing for final server update for job 6677401516 in state='finished'
[2025-06-03 02:13:00] 2025-06-03 06:12:37,458 | INFO     | this job has now completed (state=finished)
[2025-06-03 02:13:00] 2025-06-03 06:12:37,458 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 02:13:00] 2025-06-03 06:12:37,458 | INFO     | log transfer has been attempted: DONE
[2025-06-03 02:13:00] 2025-06-03 06:12:37,459 | INFO     | job 6677401516 has finished - writing final server update
[2025-06-03 02:13:00] 2025-06-03 06:12:37,459 | INFO     | total number of processed events: 400 (read)
[2025-06-03 02:13:00] 2025-06-03 06:12:37,474 | INFO     | executing command: lscpu
[2025-06-03 02:13:00] 2025-06-03 06:12:37,548 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 02:13:00] 2025-06-03 06:12:38,213 | INFO     | monitor loop #311: job 0:6677401516 is in state 'finished'
[2025-06-03 02:13:00] 2025-06-03 06:12:38,213 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 02:13:00] 2025-06-03 06:12:40,716 | INFO     | monitor loop #312: job 0:6677401516 is in state 'finished'
[2025-06-03 02:13:00] 2025-06-03 06:12:40,716 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 02:13:00] 2025-06-03 06:12:40,933 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 02:13:00] 2025-06-03 06:12:40,934 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6677401516/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 02:13:00] 2025-06-03 06:12:40,934 | INFO     | extracted standard info from prmon json
[2025-06-03 02:13:00] 2025-06-03 06:12:40,935 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 02:13:00] 2025-06-03 06:12:40,935 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 02:13:00] 2025-06-03 06:12:40,935 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 02:13:00] 2025-06-03 06:12:40,935 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 02:13:00] 2025-06-03 06:12:40,937 | INFO     | fitting pss+swap vs Time
[2025-06-03 02:13:00] 2025-06-03 06:12:40,937 | INFO     | sum of square deviations: 70364110.0
[2025-06-03 02:13:00] 2025-06-03 06:12:40,938 | INFO     | sum of deviations: 9153368298.0
[2025-06-03 02:13:00] 2025-06-03 06:12:40,938 | INFO     | mean x: 1748929155.0
[2025-06-03 02:13:00] 2025-06-03 06:12:40,938 | INFO     | mean y: 2115753.180327869
[2025-06-03 02:13:00] 2025-06-03 06:12:40,938 | INFO     | -- intersect: -227508651921.2055
[2025-06-03 02:13:00] 2025-06-03 06:12:40,938 | INFO     | intersect: -227508651921.2055
[2025-06-03 02:13:00] 2025-06-03 06:12:40,938 | INFO     | chi2: 0.9935794943209217
[2025-06-03 02:13:00] 2025-06-03 06:12:40,938 | INFO     | -- intersect: -227508651921.2055
[2025-06-03 02:13:00] 2025-06-03 06:12:40,938 | INFO     | current memory leak: 130.09 B/s (using 61 data points, chi2=0.99)
[2025-06-03 02:13:00] 2025-06-03 06:12:40,939 | INFO     | ..............................
[2025-06-03 02:13:00] 2025-06-03 06:12:40,939 | INFO     | . Timing measurements:
[2025-06-03 02:13:00] 2025-06-03 06:12:40,939 | INFO     | . get job = 0 s
[2025-06-03 02:13:00] 2025-06-03 06:12:40,939 | INFO     | . initial setup = 2 s
[2025-06-03 02:13:00] 2025-06-03 06:12:40,939 | INFO     | . payload setup = 5 s
[2025-06-03 02:13:00] 2025-06-03 06:12:40,939 | INFO     | . stage-in = 0 s
[2025-06-03 02:13:00] 2025-06-03 06:12:40,939 | INFO     | . payload execution = 4133 s
[2025-06-03 02:13:00] 2025-06-03 06:12:40,939 | INFO     | . stage-out = 0 s
[2025-06-03 02:13:00] 2025-06-03 06:12:40,939 | INFO     | . log creation = 0 s
[2025-06-03 02:13:00] 2025-06-03 06:12:40,939 | INFO     | ..............................
[2025-06-03 02:13:00] 2025-06-03 06:12:41,465 | INFO     | 
[2025-06-03 02:13:00] 2025-06-03 06:12:41,466 | INFO     | job summary report
[2025-06-03 02:13:00] 2025-06-03 06:12:41,466 | INFO     | --------------------------------------------------
[2025-06-03 02:13:00] 2025-06-03 06:12:41,466 | INFO     | PanDA job id: 6677401516
[2025-06-03 02:13:00] 2025-06-03 06:12:41,466 | INFO     | task id: 45006595
[2025-06-03 02:13:00] 2025-06-03 06:12:41,466 | INFO     | errors: (none)
[2025-06-03 02:13:00] 2025-06-03 06:12:41,466 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 02:13:00] 2025-06-03 06:12:41,466 | INFO     | pilot state: finished 
[2025-06-03 02:13:00] 2025-06-03 06:12:41,466 | INFO     | transexitcode: 0
[2025-06-03 02:13:00] 2025-06-03 06:12:41,466 | INFO     | exeerrorcode: 0
[2025-06-03 02:13:00] 2025-06-03 06:12:41,466 | INFO     | exeerrordiag: 
[2025-06-03 02:13:00] 2025-06-03 06:12:41,466 | INFO     | exitcode: 0
[2025-06-03 02:13:00] 2025-06-03 06:12:41,466 | INFO     | exitmsg: OK
[2025-06-03 02:13:00] 2025-06-03 06:12:41,466 | INFO     | cpuconsumptiontime: 27308 s
[2025-06-03 02:13:00] 2025-06-03 06:12:41,467 | INFO     | nevents: 400
[2025-06-03 02:13:00] 2025-06-03 06:12:41,467 | INFO     | neventsw: 0
[2025-06-03 02:13:00] 2025-06-03 06:12:41,467 | INFO     | pid: 2777634
[2025-06-03 02:13:00] 2025-06-03 06:12:41,467 | INFO     | pgrp: 2777634
[2025-06-03 02:13:00] 2025-06-03 06:12:41,467 | INFO     | corecount: 8
[2025-06-03 02:13:00] 2025-06-03 06:12:41,467 | INFO     | event service: False
[2025-06-03 02:13:00] 2025-06-03 06:12:41,467 | INFO     | sizes: {0: 2405011, 1: 2405210, 4: 2405416, 11: 2405444, 4142: 2431294, 4143: 2440418, 4145: 2440418, 4150: 2440588}
[2025-06-03 02:13:00] 2025-06-03 06:12:41,467 | INFO     | --------------------------------------------------
[2025-06-03 02:13:00] 2025-06-03 06:12:41,467 | INFO     | 
[2025-06-03 02:13:00] 2025-06-03 06:12:41,467 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-06-03 02:13:00] 2025-06-03 06:12:41,484 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 02:13:00] 2025-06-03 06:12:41,484 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 02:13:00] 2025-06-03 06:12:41,484 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 02:13:00] 2025-06-03 06:12:41,484 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 02:13:00] 2025-06-03 06:12:41,484 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 02:13:00] 2025-06-03 06:12:41,484 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 02:13:00] 2025-06-03 06:12:41,484 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 02:13:00] 2025-06-03 06:12:41,484 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 02:13:00] 2025-06-03 06:12:41,485 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 02:13:00] 2025-06-03 06:12:41,485 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 02:13:00] 2025-06-03 06:12:41,485 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 02:13:00] 2025-06-03 06:12:41,485 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 02:13:00] 2025-06-03 06:12:41,485 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 02:13:00] 2025-06-03 06:12:41,485 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 02:13:00] 2025-06-03 06:12:41,485 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 02:13:00] 2025-06-03 06:12:41,485 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 02:13:00] 2025-06-03 06:12:41,485 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 02:13:00] 2025-06-03 06:12:41,485 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 02:13:00] 2025-06-03 06:12:41,485 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 02:13:00] 2025-06-03 06:12:41,485 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 02:13:00] 2025-06-03 06:12:41,485 | INFO     | job 6677401516 has completed (purged errors)
[2025-06-03 02:13:00] 2025-06-03 06:12:41,486 | INFO     | overall cleanup function is called
[2025-06-03 02:13:00] 2025-06-03 06:12:42,353 | INFO     | PID=2768808 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 02:13:00] 2025-06-03 06:12:42,353 | INFO     | .. there are 8 such processes running
[2025-06-03 02:13:00] 2025-06-03 06:12:42,493 | INFO     | --- collectZombieJob: --- 10, [2777634]
[2025-06-03 02:13:00] 2025-06-03 06:12:42,494 | INFO     | zombie collector waiting for pid 2777634
[2025-06-03 02:13:00] 2025-06-03 06:12:42,494 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 02:13:00] 2025-06-03 06:12:42,494 | INFO     | collected zombie processes
[2025-06-03 02:13:00] 2025-06-03 06:12:42,494 | INFO     | will attempt to kill all subprocesses of pid=2777634
[2025-06-03 02:13:00] 2025-06-03 06:12:42,720 | INFO     | process IDs to be killed: [2777634] (in reverse order)
[2025-06-03 02:13:00] 2025-06-03 06:12:42,790 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 02:13:00] 2025-06-03 06:12:42,791 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 02:13:00] 2025-06-03 06:12:42,799 | INFO     | did not find any defunct processes belonging to 2777634
[2025-06-03 02:13:00] 2025-06-03 06:12:42,806 | INFO     | did not find any defunct processes belonging to 2777634
[2025-06-03 02:13:00] 2025-06-03 06:12:42,807 | INFO     | ready for new job
[2025-06-03 02:13:00] 2025-06-03 06:12:42,807 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 02:13:00] 2025-06-03 06:12:42,808 | INFO     | **************************************
[2025-06-03 02:13:00] 2025-06-03 06:12:42,808 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 02:13:00] 2025-06-03 06:12:42,809 | INFO     | **************************************
[2025-06-03 02:13:00] 2025-06-03 06:12:42,809 | INFO     | 
[2025-06-03 02:13:00] 2025-06-03 06:12:42,823 | INFO     | architecture information:
[2025-06-03 02:13:00] 2025-06-03 06:12:42,824 | INFO     | executing command: cat /etc/os-release
[2025-06-03 02:13:00] 2025-06-03 06:12:42,836 | INFO     | cat /etc/os-release:
[2025-06-03 02:13:00] NAME="CentOS Linux"
[2025-06-03 02:13:00] VERSION="7 (Core)"
[2025-06-03 02:13:00] ID="centos"
[2025-06-03 02:13:00] ID_LIKE="rhel fedora"
[2025-06-03 02:13:00] VERSION_ID="7"
[2025-06-03 02:13:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 02:13:00] ANSI_COLOR="0;31"
[2025-06-03 02:13:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 02:13:00] HOME_URL="https://www.centos.org/"
[2025-06-03 02:13:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 02:13:00] 
[2025-06-03 02:13:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 02:13:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 02:13:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 02:13:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 02:13:00] 
[2025-06-03 02:13:00] 2025-06-03 06:12:42,837 | INFO     | **************************************
[2025-06-03 02:13:00] 2025-06-03 06:12:43,340 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-06-03 02:13:00] 2025-06-03 06:12:43,354 | INFO     | sufficient remaining disk space (55601790976 B)
[2025-06-03 02:13:00] 2025-06-03 06:12:43,355 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 02:13:00] 2025-06-03 06:12:43,355 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 02:13:00] 2025-06-03 06:12:43,355 | INFO     | update_server=False
[2025-06-03 02:13:00] 2025-06-03 06:12:43,355 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 02:13:00] 2025-06-03 06:12:43,355 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 02:13:00] 2025-06-03 06:12:43,736 | INFO     | all data control threads have been joined
[2025-06-03 02:13:00] 2025-06-03 06:12:44,224 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:13:00] 2025-06-03 06:12:44,224 | INFO     | aborting loop
[2025-06-03 02:13:00] 2025-06-03 06:12:44,357 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 02:13:00] 2025-06-03 06:12:44,357 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 02:13:00] 2025-06-03 06:12:44,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 02:13:00] 2025-06-03 06:12:44,361 | INFO     | [job] retrieve thread has finished
[2025-06-03 02:13:00] 2025-06-03 06:12:44,404 | INFO     | all job control threads have been joined
[2025-06-03 02:13:00] 2025-06-03 06:12:44,490 | INFO     | all payload control threads have been joined
[2025-06-03 02:13:00] 2025-06-03 06:12:44,498 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 02:13:00] 2025-06-03 06:12:44,742 | INFO     | [data] control thread has finished
[2025-06-03 02:13:00] 2025-06-03 06:12:44,893 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 02:13:00] 2025-06-03 06:12:45,000 | INFO     | [data] copytool_in thread has finished
[2025-06-03 02:13:00] 2025-06-03 06:12:45,230 | INFO     | [job] job monitor thread has finished
[2025-06-03 02:13:00] 2025-06-03 06:12:45,293 | INFO     | [payload] failed_post thread has finished
[2025-06-03 02:13:00] 2025-06-03 06:12:45,361 | INFO     | [data] copytool_out thread has finished
[2025-06-03 02:13:00] 2025-06-03 06:12:45,406 | INFO     | [job] control thread has finished
[2025-06-03 02:13:00] 2025-06-03 06:12:45,422 | INFO     | [job] validate thread has finished
[2025-06-03 02:13:00] 2025-06-03 06:12:45,496 | INFO     | [payload] control thread has finished
[2025-06-03 02:13:00] 2025-06-03 06:12:45,756 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 02:13:00] 2025-06-03 06:12:45,831 | INFO     | [payload] validate_post thread has finished
[2025-06-03 02:13:00] 2025-06-03 06:12:46,033 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:13:00] 2025-06-03 06:12:46,687 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 02:13:00] 2025-06-03 06:12:47,036 | INFO     | [job] queue monitor thread has finished
[2025-06-03 02:13:00] 2025-06-03 06:12:50,692 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 02:13:00] 2025-06-03 06:12:53,453 | INFO     | job.realtimelogging is not enabled
[2025-06-03 02:13:00] 2025-06-03 06:12:54,458 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 02:13:00] 2025-06-03 06:12:55,681 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140496930170688)>', '<ExcThread(monitor, started 140496164878080)>']
[2025-06-03 02:13:00] 2025-06-03 06:12:56,397 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 02:13:00] 2025-06-03 06:12:56,397 | INFO     | [monitor] control thread has ended
[2025-06-03 02:13:00] 2025-06-03 06:13:00,682 | INFO     | all workflow threads have been joined
[2025-06-03 02:13:00] 2025-06-03 06:13:00,682 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 02:13:00] 2025-06-03 06:13:00,682 | INFO     | traces error code: 0
[2025-06-03 02:13:00] 2025-06-03 06:13:00,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 02:13:00] 2025-06-03 06:13:00,817 [wrapper] ==== pilot stdout END ====
[2025-06-03 02:13:00] 2025-06-03 06:13:00,819 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 02:13:00] 2025-06-03 06:13:00,821 [wrapper] pilotpid: 2768808
[2025-06-03 02:13:00] 2025-06-03 06:13:00,823 [wrapper] Pilot exit status: 0
[2025-06-03 02:13:00] 2025-06-03 06:13:00,831 [wrapper] pandaids: 6677401516
[2025-06-03 02:13:00] 2025-06-03 06:13:00,876 [wrapper] cleanup supervisor_pilot 2970520 2768809
[2025-06-03 02:13:00] 2025-06-03 06:13:00,878 [wrapper] Test setup, not cleaning
[2025-06-03 02:13:00] 2025-06-03 06:13:00,880 [wrapper] apfmon messages muted
[2025-06-03 02:13:00] 2025-06-03 06:13:00,883 [wrapper] ==== wrapper stdout END ====
[2025-06-03 02:13:00] 2025-06-03 06:13:00,884 [wrapper] ==== wrapper stderr END ====
[2025-06-03 02:13:00]  *** Error codes and diagnostics ***
[2025-06-03 02:13:00]     "exeErrorCode": 0,
[2025-06-03 02:13:00]     "exeErrorDiag": "",
[2025-06-03 02:13:00]     "pilotErrorCode": 0,
[2025-06-03 02:13:00]     "pilotErrorDiag": "",
[2025-06-03 02:13:00]  *** Listing of results directory ***
[2025-06-03 02:13:00] total 385644
[2025-06-03 02:13:00] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 17:10 pilot3.tar.gz
[2025-06-03 02:13:00] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 17:21 queuedata.json
[2025-06-03 02:13:00] -rwx------. 1 boincer umatlas     37140 Jun  2 17:22 runpilot2-wrapper.sh
[2025-06-03 02:13:00] -rw-r--r--. 1 boincer umatlas       100 Jun  3 01:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 02:13:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 01:03 run_atlas
[2025-06-03 02:13:00] -rw-r--r--. 1 boincer umatlas       105 Jun  3 01:03 job.xml
[2025-06-03 02:13:00] -rw-r--r--. 2 boincer umatlas 214983205 Jun  3 01:03 EVNT.45006593._000487.pool.root.1
[2025-06-03 02:13:00] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 01:03 start_atlas.sh
[2025-06-03 02:13:00] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 01:03 shared
[2025-06-03 02:13:00] -rw-r--r--. 2 boincer umatlas    508884 Jun  3 01:03 input.tar.gz
[2025-06-03 02:13:00] -rw-r--r--. 1 boincer umatlas         0 Jun  3 01:03 boinc_lockfile
[2025-06-03 02:13:00] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 01:03 pandaJob.out
[2025-06-03 02:13:00] -rw-------. 1 boincer umatlas    988081 Jun  3 01:03 agis_schedconf.cvmfs.json
[2025-06-03 02:13:00] -rw-------. 1 boincer umatlas   1603667 Jun  3 01:03 agis_ddmendpoints.agis.ALL.json
[2025-06-03 02:13:00] drwx------. 4 boincer umatlas      4096 Jun  3 01:03 pilot3
[2025-06-03 02:13:00] -rw-r--r--. 1 boincer umatlas      6843 Jun  3 02:00 init_data.xml
[2025-06-03 02:13:00] -rw-r--r--. 1 boincer umatlas       529 Jun  3 02:12 boinc_task_state.xml
[2025-06-03 02:13:00] -rw-------. 1 boincer umatlas 174624048 Jun  3 02:12 HITS.45006595._012170.pool.root.1
[2025-06-03 02:13:00] -rw-------. 1 boincer umatlas        95 Jun  3 02:12 pilot_heartbeat.json
[2025-06-03 02:13:00] -rw-------. 1 boincer umatlas      1033 Jun  3 02:12 memory_monitor_summary.json
[2025-06-03 02:13:00] -rw-------. 1 boincer umatlas    305151 Jun  3 02:12 log.45006595._012170.job.log.tgz.1
[2025-06-03 02:13:00] -rw-------. 1 boincer umatlas      7710 Jun  3 02:12 heartbeat.json
[2025-06-03 02:13:00] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 02:12 boinc_mmap_file
[2025-06-03 02:13:00] -rw-r--r--. 1 boincer umatlas        27 Jun  3 02:12 wrapper_checkpoint.txt
[2025-06-03 02:13:00] -rw-------. 1 boincer umatlas      4425 Jun  3 02:13 pilotlog.txt
[2025-06-03 02:13:00] -rw-------. 1 boincer umatlas    418462 Jun  3 02:13 log.45006595._012170.job.log.1
[2025-06-03 02:13:00] -rw-------. 1 boincer umatlas       357 Jun  3 02:13 output.list
[2025-06-03 02:13:00] -rw-r--r--. 1 boincer umatlas       620 Jun  3 02:13 runtime_log
[2025-06-03 02:13:00] -rw-------. 1 boincer umatlas    747520 Jun  3 02:13 result.tar.gz
[2025-06-03 02:13:00] -rw-r--r--. 1 boincer umatlas      8664 Jun  3 02:13 runtime_log.err
[2025-06-03 02:13:00] -rw-------. 1 boincer umatlas       652 Jun  3 02:13 qPPLDmOnRg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNmgKDmo39RSo.diag
[2025-06-03 02:13:00] -rw-r--r--. 1 boincer umatlas     21471 Jun  3 02:13 stderr.txt
[2025-06-03 02:13:00] HITS file was successfully produced:
[2025-06-03 02:13:00] -rw-------. 1 boincer umatlas 174624048 Jun  3 02:12 shared/HITS.pool.root.1
[2025-06-03 02:13:00]  *** Contents of shared directory: ***
[2025-06-03 02:13:00] total 381732
[2025-06-03 02:13:00] -rw-r--r--. 2 boincer umatlas 214983205 Jun  3 01:03 ATLAS.root_0
[2025-06-03 02:13:00] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 01:03 start_atlas.sh
[2025-06-03 02:13:00] -rw-r--r--. 2 boincer umatlas    508884 Jun  3 01:03 input.tar.gz
[2025-06-03 02:13:00] -rw-------. 1 boincer umatlas 174624048 Jun  3 02:12 HITS.pool.root.1
[2025-06-03 02:13:00] -rw-------. 1 boincer umatlas    747520 Jun  3 02:13 result.tar.gz
02:13:02 (2765208): run_atlas exited; CPU time 27401.956730
02:13:02 (2765208): called boinc_finish(0)

</stderr_txt>
]]>

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