Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:17:21 (30204): wrapper (7.7.26015): starting
15:17:21 (30204): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 15:17:21] Arguments: --nthreads 8
[2025-06-03 15:17:21] Threads: 8
[2025-06-03 15:17:21] Checking for CVMFS
[2025-06-03 15:17:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:17:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:17:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:17:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:17:24] 2.11.2.0 28231 31805 89128 146741 3 112 15849964 25165824 4251 130560 0 16545038 99.809 18202440 2184 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 15:17:24] CVMFS is ok
[2025-06-03 15:17:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:17:24] Checking for apptainer binary...
[2025-06-03 15:17:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:17:24] Running /usr/bin/apptainer --version
[2025-06-03 15:17:24] apptainer version 1.3.2-1.el7
[2025-06-03 15:17:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:28:51] cg-vwn282.simple-grid.lan
[2025-06-03 15:28:51] apptainer works
[2025-06-03 15:28:51] Set ATHENA_PROC_NUMBER=8
[2025-06-03 15:28:51] Set ATHENA_CORE_NUMBER=8
[2025-06-03 15:28:51] Starting ATLAS job with PandaID=6677441780
[2025-06-03 15:28:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 19:30:26]  *** The last 200 lines of the pilot log: ***
[2025-06-03 19:30:26] 2025-06-03 17:28:45,617 | INFO     | extracted standard info from prmon json
[2025-06-03 19:30:26] 2025-06-03 17:28:45,617 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 19:30:26] 2025-06-03 17:28:45,618 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:30:26] 2025-06-03 17:28:45,618 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:30:26] 2025-06-03 17:28:45,618 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:30:26] 2025-06-03 17:28:45,622 | INFO     | fitting pss+swap vs Time
[2025-06-03 19:30:26] 2025-06-03 17:28:45,623 | INFO     | sum of square deviations: 3485088600.0
[2025-06-03 19:30:26] 2025-06-03 17:28:45,625 | INFO     | sum of deviations: 3300732813.999998
[2025-06-03 19:30:26] 2025-06-03 17:28:45,625 | INFO     | mean x: 1748964803.5
[2025-06-03 19:30:26] 2025-06-03 17:28:45,625 | INFO     | mean y: 2522831.9910714286
[2025-06-03 19:30:26] 2025-06-03 17:28:45,625 | INFO     | -- intersect: -1653924443.8238127
[2025-06-03 19:30:26] 2025-06-03 17:28:45,625 | INFO     | intersect: -1653924443.8238127
[2025-06-03 19:30:26] 2025-06-03 17:28:45,626 | INFO     | chi2: 6.4190151322371545
[2025-06-03 19:30:26] 2025-06-03 17:28:45,626 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 19:30:26] 2025-06-03 17:28:45,628 | INFO     | sum of deviations: 19516309560.999996
[2025-06-03 19:30:26] 2025-06-03 17:28:45,628 | INFO     | mean x: 1748964651.0
[2025-06-03 19:30:26] 2025-06-03 17:28:45,628 | INFO     | mean y: 2533490.315068493
[2025-06-03 19:30:26] 2025-06-03 17:28:45,628 | INFO     | -- intersect: -10477846197.818241
[2025-06-03 19:30:26] 2025-06-03 17:28:45,628 | INFO     | intersect: -10477846197.818241
[2025-06-03 19:30:26] 2025-06-03 17:28:45,629 | INFO     | chi2: 5.706205411851268
[2025-06-03 19:30:26] 2025-06-03 17:28:45,629 | INFO     | current chi2=5.706205411851268 (change=11.10465866961522 %)
[2025-06-03 19:30:26] 2025-06-03 17:28:45,629 | INFO     | right removable region: 218
[2025-06-03 19:30:26] 2025-06-03 17:28:45,629 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 19:30:26] 2025-06-03 17:28:45,631 | INFO     | sum of deviations: -73876570824.99998
[2025-06-03 19:30:26] 2025-06-03 17:28:45,631 | INFO     | mean x: 1748964956.0
[2025-06-03 19:30:26] 2025-06-03 17:28:45,631 | INFO     | mean y: 2574344.4474885846
[2025-06-03 19:30:26] 2025-06-03 17:28:45,631 | INFO     | -- intersect: 39674759544.45427
[2025-06-03 19:30:26] 2025-06-03 17:28:45,637 | INFO     | intersect: 39674759544.45427
[2025-06-03 19:30:26] 2025-06-03 17:28:45,637 | INFO     | chi2: 1.8913190760432341
[2025-06-03 19:30:26] 2025-06-03 17:28:45,638 | INFO     | current chi2=1.8913190760432341 (change=70.53568129875912 %)
[2025-06-03 19:30:26] 2025-06-03 17:28:45,638 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 19:30:26] 2025-06-03 17:28:45,640 | INFO     | sum of deviations: -102206415701.50002
[2025-06-03 19:30:26] 2025-06-03 17:28:45,640 | INFO     | mean x: 1748965108.5
[2025-06-03 19:30:26] 2025-06-03 17:28:45,640 | INFO     | mean y: 2594006.1261682245
[2025-06-03 19:30:26] 2025-06-03 17:28:45,640 | INFO     | -- intersect: 58825847699.963455
[2025-06-03 19:30:26] 2025-06-03 17:28:45,640 | INFO     | intersect: 58825847699.963455
[2025-06-03 19:30:26] 2025-06-03 17:28:45,641 | INFO     | chi2: 0.9906683001595709
[2025-06-03 19:30:26] 2025-06-03 17:28:45,641 | INFO     | current chi2=0.9906683001595709 (change=47.620244901663284 %)
[2025-06-03 19:30:26] 2025-06-03 17:28:45,641 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 19:30:26] 2025-06-03 17:28:45,643 | INFO     | sum of deviations: -100689657381.0
[2025-06-03 19:30:26] 2025-06-03 17:28:45,643 | INFO     | mean x: 1748965261.0
[2025-06-03 19:30:26] 2025-06-03 17:28:45,643 | INFO     | mean y: 2592865.210526316
[2025-06-03 19:30:26] 2025-06-03 17:28:45,643 | INFO     | -- intersect: 62212378758.66234
[2025-06-03 19:30:26] 2025-06-03 17:28:45,643 | INFO     | intersect: 62212378758.66234
[2025-06-03 19:30:26] 2025-06-03 17:28:45,644 | INFO     | chi2: 0.9676065472226005
[2025-06-03 19:30:26] 2025-06-03 17:28:45,644 | INFO     | current chi2=0.9676065472226005 (change=2.3278985441702007 %)
[2025-06-03 19:30:26] 2025-06-03 17:28:45,644 | INFO     | left removable region: 30
[2025-06-03 19:30:26] 2025-06-03 17:28:45,644 | INFO     | sum of square deviations: 2060343747.0
[2025-06-03 19:30:26] 2025-06-03 17:28:45,646 | INFO     | sum of deviations: -69442281995.5
[2025-06-03 19:30:26] 2025-06-03 17:28:45,646 | INFO     | mean x: 1748965535.5
[2025-06-03 19:30:26] 2025-06-03 17:28:45,646 | INFO     | mean y: 2595187.324468085
[2025-06-03 19:30:26] 2025-06-03 17:28:45,646 | INFO     | -- intersect: 58950116975.105865
[2025-06-03 19:30:26] 2025-06-03 17:28:45,646 | INFO     | intersect: 58950116975.105865
[2025-06-03 19:30:26] 2025-06-03 17:28:45,646 | INFO     | chi2: 0.1729239814271911
[2025-06-03 19:30:26] 2025-06-03 17:28:45,647 | INFO     | -- intersect: 58950116975.105865
[2025-06-03 19:30:26] 2025-06-03 17:28:45,647 | INFO     | current memory leak: -33.70 B/s (using 188 data points, chi2=0.17)
[2025-06-03 19:30:26] 2025-06-03 17:28:45,654 | INFO     | ..............................
[2025-06-03 19:30:26] 2025-06-03 17:28:45,654 | INFO     | . Timing measurements:
[2025-06-03 19:30:26] 2025-06-03 17:28:45,654 | INFO     | . get job = 0 s
[2025-06-03 19:30:26] 2025-06-03 17:28:45,654 | INFO     | . initial setup = 9 s
[2025-06-03 19:30:26] 2025-06-03 17:28:45,654 | INFO     | . payload setup = 156 s
[2025-06-03 19:30:26] 2025-06-03 17:28:45,654 | INFO     | . stage-in = 0 s
[2025-06-03 19:30:26] 2025-06-03 17:28:45,655 | INFO     | . payload execution = 13778 s
[2025-06-03 19:30:26] 2025-06-03 17:28:45,655 | INFO     | . stage-out = 3 s
[2025-06-03 19:30:26] 2025-06-03 17:28:45,655 | INFO     | . log creation = 1 s
[2025-06-03 19:30:26] 2025-06-03 17:28:45,655 | INFO     | ..............................
[2025-06-03 19:30:26] 2025-06-03 17:28:46,177 | INFO     | 
[2025-06-03 19:30:26] 2025-06-03 17:28:46,177 | INFO     | job summary report
[2025-06-03 19:30:26] 2025-06-03 17:28:46,177 | INFO     | --------------------------------------------------
[2025-06-03 19:30:26] 2025-06-03 17:28:46,177 | INFO     | PanDA job id: 6677441780
[2025-06-03 19:30:26] 2025-06-03 17:28:46,177 | INFO     | task id: 45006595
[2025-06-03 19:30:26] 2025-06-03 17:28:46,177 | INFO     | errors: (none)
[2025-06-03 19:30:26] 2025-06-03 17:28:46,177 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 19:30:26] 2025-06-03 17:28:46,178 | INFO     | pilot state: finished 
[2025-06-03 19:30:26] 2025-06-03 17:28:46,178 | INFO     | transexitcode: 0
[2025-06-03 19:30:26] 2025-06-03 17:28:46,178 | INFO     | exeerrorcode: 0
[2025-06-03 19:30:26] 2025-06-03 17:28:46,178 | INFO     | exeerrordiag: 
[2025-06-03 19:30:26] 2025-06-03 17:28:46,178 | INFO     | exitcode: 0
[2025-06-03 19:30:26] 2025-06-03 17:28:46,178 | INFO     | exitmsg: OK
[2025-06-03 19:30:26] 2025-06-03 17:28:46,178 | INFO     | cpuconsumptiontime: 49763 s
[2025-06-03 19:30:26] 2025-06-03 17:28:46,178 | INFO     | nevents: 400
[2025-06-03 19:30:26] 2025-06-03 17:28:46,178 | INFO     | neventsw: 0
[2025-06-03 19:30:26] 2025-06-03 17:28:46,178 | INFO     | pid: 20683
[2025-06-03 19:30:26] 2025-06-03 17:28:46,178 | INFO     | pgrp: 20683
[2025-06-03 19:30:26] 2025-06-03 17:28:46,179 | INFO     | corecount: 8
[2025-06-03 19:30:26] 2025-06-03 17:28:46,179 | INFO     | event service: False
[2025-06-03 19:30:26] 2025-06-03 17:28:46,179 | INFO     | sizes: {0: 2405011, 1: 2405210, 12: 2405210, 22: 2405238, 33: 2405266, 44: 2405322, 55: 2405478, 65: 2405506, 76: 2405534, 87: 2405824, 13939: 2435730, 13944: 2444
[2025-06-03 19:30:26] 2025-06-03 17:28:46,179 | INFO     | --------------------------------------------------
[2025-06-03 19:30:26] 2025-06-03 17:28:46,179 | INFO     | 
[2025-06-03 19:30:26] 2025-06-03 17:28:46,179 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-03 19:30:26] 2025-06-03 17:28:46,706 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 19:30:26] 2025-06-03 17:28:46,707 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 19:30:26] 2025-06-03 17:28:46,707 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 19:30:26] 2025-06-03 17:28:46,707 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 19:30:26] 2025-06-03 17:28:46,707 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 19:30:26] 2025-06-03 17:28:46,707 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 19:30:26] 2025-06-03 17:28:46,707 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 19:30:26] 2025-06-03 17:28:46,707 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 19:30:26] 2025-06-03 17:28:46,707 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 19:30:26] 2025-06-03 17:28:46,707 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 19:30:26] 2025-06-03 17:28:46,707 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 19:30:26] 2025-06-03 17:28:46,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 19:30:26] 2025-06-03 17:28:46,708 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 19:30:26] 2025-06-03 17:28:46,708 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 19:30:26] 2025-06-03 17:28:46,708 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 19:30:26] 2025-06-03 17:28:46,708 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 19:30:26] 2025-06-03 17:28:46,708 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 19:30:26] 2025-06-03 17:28:46,708 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 19:30:26] 2025-06-03 17:28:46,708 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 19:30:26] 2025-06-03 17:28:46,708 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 19:30:26] 2025-06-03 17:28:46,708 | INFO     | job 6677441780 has completed (purged errors)
[2025-06-03 19:30:26] 2025-06-03 17:28:46,709 | INFO     | overall cleanup function is called
[2025-06-03 19:30:26] 2025-06-03 17:28:47,718 | INFO     | --- collectZombieJob: --- 10, [20683]
[2025-06-03 19:30:26] 2025-06-03 17:28:47,718 | INFO     | zombie collector waiting for pid 20683
[2025-06-03 19:30:26] 2025-06-03 17:28:47,718 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 19:30:26] 2025-06-03 17:28:47,718 | INFO     | collected zombie processes
[2025-06-03 19:30:26] 2025-06-03 17:28:47,718 | INFO     | will attempt to kill all subprocesses of pid=20683
[2025-06-03 19:30:26] 2025-06-03 17:28:47,823 | INFO     | process IDs to be killed: [20683] (in reverse order)
[2025-06-03 19:30:26] 2025-06-03 17:28:48,778 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 19:30:26] 2025-06-03 17:28:48,779 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 19:30:26] 2025-06-03 17:28:48,782 | INFO     | did not find any defunct processes belonging to 20683
[2025-06-03 19:30:26] 2025-06-03 17:28:48,785 | INFO     | did not find any defunct processes belonging to 20683
[2025-06-03 19:30:26] 2025-06-03 17:28:48,785 | INFO     | ready for new job
[2025-06-03 19:30:26] 2025-06-03 17:28:48,786 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 19:30:26] 2025-06-03 17:28:48,787 | INFO     | **************************************
[2025-06-03 19:30:26] 2025-06-03 17:28:48,788 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 19:30:26] 2025-06-03 17:28:48,788 | INFO     | **************************************
[2025-06-03 19:30:26] 2025-06-03 17:28:48,788 | INFO     | 
[2025-06-03 19:30:26] 2025-06-03 17:28:48,788 | INFO     | pilot is running in a VM
[2025-06-03 19:30:26] 2025-06-03 17:28:48,788 | INFO     | architecture information:
[2025-06-03 19:30:26] 2025-06-03 17:28:48,792 | INFO     | executing command: cat /etc/os-release
[2025-06-03 19:30:26] 2025-06-03 17:28:49,079 | INFO     | cat /etc/os-release:
[2025-06-03 19:30:26] NAME="CentOS Linux"
[2025-06-03 19:30:26] VERSION="7 (Core)"
[2025-06-03 19:30:26] ID="centos"
[2025-06-03 19:30:26] ID_LIKE="rhel fedora"
[2025-06-03 19:30:26] VERSION_ID="7"
[2025-06-03 19:30:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 19:30:26] ANSI_COLOR="0;31"
[2025-06-03 19:30:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 19:30:26] HOME_URL="https://www.centos.org/"
[2025-06-03 19:30:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 19:30:26] 
[2025-06-03 19:30:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 19:30:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 19:30:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 19:30:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 19:30:26] 
[2025-06-03 19:30:26] 2025-06-03 17:28:49,080 | INFO     | **************************************
[2025-06-03 19:30:26] 2025-06-03 17:28:49,582 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-03 19:30:26] 2025-06-03 17:28:49,736 | INFO     | sufficient remaining disk space (496849911808 B)
[2025-06-03 19:30:26] 2025-06-03 17:28:49,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 19:30:26] 2025-06-03 17:28:49,736 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 19:30:26] 2025-06-03 17:28:49,736 | INFO     | update_server=False
[2025-06-03 19:30:26] 2025-06-03 17:28:49,736 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 19:30:26] 2025-06-03 17:28:49,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:30:26] 2025-06-03 17:28:49,740 | INFO     | aborting loop
[2025-06-03 19:30:26] 2025-06-03 17:28:49,747 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 19:30:26] 2025-06-03 17:28:49,747 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 19:30:26] 2025-06-03 17:28:49,747 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 19:30:26] 2025-06-03 17:28:49,747 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 19:30:26] 2025-06-03 17:28:50,581 | INFO     | all payload control threads have been joined
[2025-06-03 19:30:26] 2025-06-03 17:28:50,642 | INFO     | all data control threads have been joined
[2025-06-03 19:30:26] 2025-06-03 17:28:50,743 | INFO     | [job] retrieve thread has finished
[2025-06-03 19:30:26] 2025-06-03 17:28:50,746 | INFO     | [job] job monitor thread has finished
[2025-06-03 19:30:26] 2025-06-03 17:28:50,780 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 19:30:26] 2025-06-03 17:28:50,837 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:30:26] 2025-06-03 17:28:51,127 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 19:30:26] 2025-06-03 17:28:51,180 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 19:30:26] 2025-06-03 17:28:51,338 | INFO     | all job control threads have been joined
[2025-06-03 19:30:26] 2025-06-03 17:28:51,484 | INFO     | [payload] validate_post thread has finished
[2025-06-03 19:30:26] 2025-06-03 17:28:51,493 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 19:30:26] 2025-06-03 17:28:51,587 | INFO     | [payload] control thread has finished
[2025-06-03 19:30:26] 2025-06-03 17:28:51,611 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 19:30:26] 2025-06-03 17:28:51,648 | INFO     | [data] control thread has finished
[2025-06-03 19:30:26] 2025-06-03 17:28:51,843 | INFO     | [job] queue monitor thread has finished
[2025-06-03 19:30:26] 2025-06-03 17:28:52,138 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 19:30:26] 2025-06-03 17:28:52,212 | INFO     | [payload] failed_post thread has finished
[2025-06-03 19:30:26] 2025-06-03 17:28:52,228 | INFO     | [data] copytool_in thread has finished
[2025-06-03 19:30:26] 2025-06-03 17:28:52,229 | INFO     | [job] validate thread has finished
[2025-06-03 19:30:26] 2025-06-03 17:28:52,344 | INFO     | [job] control thread has finished
[2025-06-03 19:30:26] 2025-06-03 17:28:52,786 | INFO     | [data] copytool_out thread has finished
[2025-06-03 19:30:26] 2025-06-03 17:28:55,136 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 19:30:26] 2025-06-03 17:28:55,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140141682456384)>', '<ExcThread(monitor, started 140141024769792)>']
[2025-06-03 19:30:26] 2025-06-03 17:28:55,783 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 19:30:26] 2025-06-03 17:28:55,783 | INFO     | [monitor] control thread has ended
[2025-06-03 19:30:26] 2025-06-03 17:29:00,463 | INFO     | all workflow threads have been joined
[2025-06-03 19:30:26] 2025-06-03 17:29:00,463 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 19:30:26] 2025-06-03 17:29:00,463 | INFO     | traces error code: 0
[2025-06-03 19:30:26] 2025-06-03 17:29:00,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 19:30:26] 2025-06-03 17:29:00,925 [wrapper] ==== pilot stdout END ====
[2025-06-03 19:30:26] 2025-06-03 17:29:00,970 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 19:30:26] 2025-06-03 17:29:01,026 [wrapper] pilotpid: 9931
[2025-06-03 19:30:26] 2025-06-03 17:29:01,145 [wrapper] Pilot exit status: 0
[2025-06-03 19:30:26] 2025-06-03 17:29:01,720 [wrapper] pandaids: 6677441780
[2025-06-03 19:30:26] 2025-06-03 17:29:02,335 [wrapper] cleanup supervisor_pilot  1423 9932
[2025-06-03 19:30:26] 2025-06-03 17:29:02,441 [wrapper] Test setup, not cleaning
[2025-06-03 19:30:26] 2025-06-03 17:29:02,559 [wrapper] apfmon messages muted
[2025-06-03 19:30:26] 2025-06-03 17:29:02,618 [wrapper] ==== wrapper stdout END ====
[2025-06-03 19:30:26] 2025-06-03 17:29:02,734 [wrapper] ==== wrapper stderr END ====
[2025-06-03 19:30:26]  *** Error codes and diagnostics ***
[2025-06-03 19:30:26]     "exeErrorCode": 0,
[2025-06-03 19:30:26]     "exeErrorDiag": "",
[2025-06-03 19:30:26]     "pilotErrorCode": 0,
[2025-06-03 19:30:26]     "pilotErrorDiag": "",
[2025-06-03 19:30:26]  *** Listing of results directory ***
[2025-06-03 19:30:26] total 386360
[2025-06-03 19:30:26] -rw-r--r--. 1 boinc boinc    495897 Jun  3 03:09 pilot3.tar.gz
[2025-06-03 19:30:26] -rwx------. 1 boinc boinc     37140 Jun  3 03:10 runpilot2-wrapper.sh
[2025-06-03 19:30:26] -rw-r--r--. 1 boinc boinc      5111 Jun  3 03:10 queuedata.json
[2025-06-03 19:30:26] -rw-r--r--. 1 boinc boinc       100 Jun  3 15:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 19:30:26] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 15:17 run_atlas
[2025-06-03 19:30:26] -rw-r--r--. 1 boinc boinc       105 Jun  3 15:17 job.xml
[2025-06-03 19:30:26] -rw-r--r--. 2 boinc boinc 213711578 Jun  3 15:17 EVNT.45006593._000641.pool.root.1
[2025-06-03 19:30:26] drwxrwx--x. 2 boinc boinc        68 Jun  3 15:17 shared
[2025-06-03 19:30:26] -rw-r--r--. 2 boinc boinc    508874 Jun  3 15:17 input.tar.gz
[2025-06-03 19:30:26] -rw-r--r--. 1 boinc boinc      6391 Jun  3 15:17 init_data.xml
[2025-06-03 19:30:26] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:17 start_atlas.sh
[2025-06-03 19:30:26] -rw-r--r--. 1 boinc boinc         0 Jun  3 15:17 boinc_lockfile
[2025-06-03 19:30:26] -rw-r--r--. 1 boinc boinc      2524 Jun  3 15:28 pandaJob.out
[2025-06-03 19:30:26] -rw-------. 1 boinc boinc    982724 Jun  3 15:31 agis_schedconf.cvmfs.json
[2025-06-03 19:30:26] drwx------. 4 boinc boinc      4096 Jun  3 15:32 pilot3
[2025-06-03 19:30:26] -rw-------. 1 boinc boinc 174908106 Jun  3 19:26 HITS.45006595._016018.pool.root.1
[2025-06-03 19:30:26] -rw-r--r--. 1 boinc boinc       531 Jun  3 19:26 boinc_task_state.xml
[2025-06-03 19:30:26] -rw-------. 1 boinc boinc      1018 Jun  3 19:27 memory_monitor_summary.json
[2025-06-03 19:30:26] -rw-------. 1 boinc boinc   1603667 Jun  3 19:27 agis_ddmendpoints.agis.ALL.json
[2025-06-03 19:30:26] -rw-------. 1 boinc boinc    387036 Jun  3 19:27 log.45006595._016018.job.log.tgz.1
[2025-06-03 19:30:26] -rw-------. 1 boinc boinc        95 Jun  3 19:28 pilot_heartbeat.json
[2025-06-03 19:30:26] -rw-------. 1 boinc boinc      7696 Jun  3 19:28 heartbeat.json
[2025-06-03 19:30:26] -rw-------. 1 boinc boinc      4539 Jun  3 19:29 pilotlog.txt
[2025-06-03 19:30:26] -rw-------. 1 boinc boinc   1213725 Jun  3 19:29 log.45006595._016018.job.log.1
[2025-06-03 19:30:26] -rw-------. 1 boinc boinc       357 Jun  3 19:29 output.list
[2025-06-03 19:30:26] -rw-r--r--. 1 boinc boinc       620 Jun  3 19:29 runtime_log
[2025-06-03 19:30:26] -rw-------. 1 boinc boinc   1617920 Jun  3 19:29 result.tar.gz
[2025-06-03 19:30:26] -rw-r--r--. 1 boinc boinc      8659 Jun  3 19:29 runtime_log.err
[2025-06-03 19:30:26] -rw-------. 1 boinc boinc       656 Jun  3 19:29 bnuMDmsLVg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsMhKDmYTDIjn.diag
[2025-06-03 19:30:26] -rw-r--r--. 1 boinc boinc      8192 Jun  3 19:30 boinc_mmap_file
[2025-06-03 19:30:26] -rw-r--r--. 1 boinc boinc        28 Jun  3 19:30 wrapper_checkpoint.txt
[2025-06-03 19:30:26] -rw-r--r--. 1 boinc boinc     20458 Jun  3 19:30 stderr.txt
[2025-06-03 19:30:26] HITS file was successfully produced:
[2025-06-03 19:30:26] -rw-------. 1 boinc boinc 174908106 Jun  3 19:26 shared/HITS.pool.root.1
[2025-06-03 19:30:26]  *** Contents of shared directory: ***
[2025-06-03 19:30:26] total 381612
[2025-06-03 19:30:26] -rw-r--r--. 2 boinc boinc 213711578 Jun  3 15:17 ATLAS.root_0
[2025-06-03 19:30:26] -rw-r--r--. 2 boinc boinc    508874 Jun  3 15:17 input.tar.gz
[2025-06-03 19:30:26] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:17 start_atlas.sh
[2025-06-03 19:30:26] -rw-------. 1 boinc boinc 174908106 Jun  3 19:26 HITS.pool.root.1
[2025-06-03 19:30:26] -rw-------. 1 boinc boinc   1617920 Jun  3 19:29 result.tar.gz
19:30:28 (30204): run_atlas exited; CPU time 49947.176047
19:30:28 (30204): called boinc_finish(0)

</stderr_txt>
]]>

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