Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:18:48 (20141): wrapper (7.7.26015): starting
14:18:48 (20141): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:18:48] Arguments: --nthreads 8
[2025-06-03 14:18:48] Threads: 8
[2025-06-03 14:18:48] Checking for CVMFS
[2025-06-03 14:18:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:18:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:18:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:18:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:18:49] 2.11.2.0 3740 31904 98192 146741 2 155 17024593 25165825 3291 130560 0 17158895 99.820 17863674 2150 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 14:18:49] CVMFS is ok
[2025-06-03 14:18:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:18:49] Checking for apptainer binary...
[2025-06-03 14:18:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:18:49] Running /usr/bin/apptainer --version
[2025-06-03 14:18:49] apptainer version 1.3.2-1.el7
[2025-06-03 14:18:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:18:51] cg-vwn234.simple-grid.lan
[2025-06-03 14:18:51] apptainer works
[2025-06-03 14:18:51] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:18:51] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:18:51] Starting ATLAS job with PandaID=6677442119
[2025-06-03 14:18:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:00:00]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:00:00] 2025-06-03 15:58:51,450 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6677442119/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:00:00] 2025-06-03 15:58:51,451 | INFO     | extracted standard info from prmon json
[2025-06-03 18:00:00] 2025-06-03 15:58:51,451 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:00:00] 2025-06-03 15:58:51,451 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:00:00] 2025-06-03 15:58:51,452 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:00:00] 2025-06-03 15:58:51,452 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:00:00] 2025-06-03 15:58:51,456 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:00:00] 2025-06-03 15:58:51,457 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 18:00:00] 2025-06-03 15:58:51,459 | INFO     | sum of deviations: -36863552513.000015
[2025-06-03 18:00:00] 2025-06-03 15:58:51,459 | INFO     | mean x: 1748959744.5
[2025-06-03 18:00:00] 2025-06-03 15:58:51,459 | INFO     | mean y: 2528935.579439252
[2025-06-03 18:00:00] 2025-06-03 15:58:51,459 | INFO     | -- intersect: 21218686807.3919
[2025-06-03 18:00:00] 2025-06-03 15:58:51,459 | INFO     | intersect: 21218686807.3919
[2025-06-03 18:00:00] 2025-06-03 15:58:51,460 | INFO     | chi2: 2.8791902905777524
[2025-06-03 18:00:00] 2025-06-03 15:58:51,460 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 18:00:00] 2025-06-03 15:58:51,462 | INFO     | sum of deviations: -21324058164.000004
[2025-06-03 18:00:00] 2025-06-03 15:58:51,462 | INFO     | mean x: 1748959592.0
[2025-06-03 18:00:00] 2025-06-03 15:58:51,462 | INFO     | mean y: 2540129.2535885167
[2025-06-03 18:00:00] 2025-06-03 15:58:51,462 | INFO     | -- intersect: 13177287441.056381
[2025-06-03 18:00:00] 2025-06-03 15:58:51,462 | INFO     | intersect: 13177287441.056381
[2025-06-03 18:00:00] 2025-06-03 15:58:51,462 | INFO     | chi2: 2.1187378076748336
[2025-06-03 18:00:00] 2025-06-03 15:58:51,463 | INFO     | current chi2=2.1187378076748336 (change=26.412025818214424 %)
[2025-06-03 18:00:00] 2025-06-03 15:58:51,463 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 18:00:00] 2025-06-03 15:58:51,464 | INFO     | sum of deviations: -20130041205.500008
[2025-06-03 18:00:00] 2025-06-03 15:58:51,465 | INFO     | mean x: 1748959439.5
[2025-06-03 18:00:00] 2025-06-03 15:58:51,465 | INFO     | mean y: 2541047.455882353
[2025-06-03 18:00:00] 2025-06-03 15:58:51,465 | INFO     | -- intersect: 13376682470.738245
[2025-06-03 18:00:00] 2025-06-03 15:58:51,465 | INFO     | intersect: 13376682470.738245
[2025-06-03 18:00:00] 2025-06-03 15:58:51,465 | INFO     | chi2: 2.1179581326907035
[2025-06-03 18:00:00] 2025-06-03 15:58:51,465 | INFO     | current chi2=2.1179581326907035 (change=0.03679903106961811 %)
[2025-06-03 18:00:00] 2025-06-03 15:58:51,465 | INFO     | right removable region: 203
[2025-06-03 18:00:00] 2025-06-03 15:58:51,466 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 18:00:00] 2025-06-03 15:58:51,480 | INFO     | sum of deviations: -77922952694.0
[2025-06-03 18:00:00] 2025-06-03 15:58:51,480 | INFO     | mean x: 1748959897.0
[2025-06-03 18:00:00] 2025-06-03 15:58:51,480 | INFO     | mean y: 2558793.023923445
[2025-06-03 18:00:00] 2025-06-03 15:58:51,480 | INFO     | -- intersect: 48146086758.8678
[2025-06-03 18:00:00] 2025-06-03 15:58:51,480 | INFO     | intersect: 48146086758.8678
[2025-06-03 18:00:00] 2025-06-03 15:58:51,481 | INFO     | chi2: 1.03460885176907
[2025-06-03 18:00:00] 2025-06-03 15:58:51,481 | INFO     | current chi2=1.03460885176907 (change=64.06597871787557 %)
[2025-06-03 18:00:00] 2025-06-03 15:58:51,481 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 18:00:00] 2025-06-03 15:58:51,483 | INFO     | sum of deviations: -78950627105.5
[2025-06-03 18:00:00] 2025-06-03 15:58:51,483 | INFO     | mean x: 1748960049.5
[2025-06-03 18:00:00] 2025-06-03 15:58:51,483 | INFO     | mean y: 2559543.8578431373
[2025-06-03 18:00:00] 2025-06-03 15:58:51,483 | INFO     | -- intersect: 52456362785.53938
[2025-06-03 18:00:00] 2025-06-03 15:58:51,483 | INFO     | intersect: 52456362785.53938
[2025-06-03 18:00:00] 2025-06-03 15:58:51,484 | INFO     | chi2: 0.9983877896332951
[2025-06-03 18:00:00] 2025-06-03 15:58:51,484 | INFO     | current chi2=0.9983877896332951 (change=3.500942609744802 %)
[2025-06-03 18:00:00] 2025-06-03 15:58:51,484 | INFO     | left removable region: 20
[2025-06-03 18:00:00] 2025-06-03 15:58:51,484 | INFO     | sum of square deviations: 1900284932.0
[2025-06-03 18:00:00] 2025-06-03 15:58:51,485 | INFO     | sum of deviations: -51261024748.00003
[2025-06-03 18:00:00] 2025-06-03 15:58:51,486 | INFO     | mean x: 1748960019.0
[2025-06-03 18:00:00] 2025-06-03 15:58:51,486 | INFO     | mean y: 2565497.4808743168
[2025-06-03 18:00:00] 2025-06-03 15:58:51,486 | INFO     | -- intersect: 47181533928.73801
[2025-06-03 18:00:00] 2025-06-03 15:58:51,486 | INFO     | intersect: 47181533928.73801
[2025-06-03 18:00:00] 2025-06-03 15:58:51,486 | INFO     | chi2: 0.19820315548818043
[2025-06-03 18:00:00] 2025-06-03 15:58:51,486 | INFO     | -- intersect: 47181533928.73801
[2025-06-03 18:00:00] 2025-06-03 15:58:51,486 | INFO     | current memory leak: -26.98 B/s (using 183 data points, chi2=0.20)
[2025-06-03 18:00:00] 2025-06-03 15:58:51,487 | INFO     | ..............................
[2025-06-03 18:00:00] 2025-06-03 15:58:51,487 | INFO     | . Timing measurements:
[2025-06-03 18:00:00] 2025-06-03 15:58:51,488 | INFO     | . get job = 0 s
[2025-06-03 18:00:00] 2025-06-03 15:58:51,488 | INFO     | . initial setup = 2 s
[2025-06-03 18:00:00] 2025-06-03 15:58:51,488 | INFO     | . payload setup = 19 s
[2025-06-03 18:00:00] 2025-06-03 15:58:51,488 | INFO     | . stage-in = 0 s
[2025-06-03 18:00:00] 2025-06-03 15:58:51,488 | INFO     | . payload execution = 13051 s
[2025-06-03 18:00:00] 2025-06-03 15:58:51,488 | INFO     | . stage-out = 3 s
[2025-06-03 18:00:00] 2025-06-03 15:58:51,488 | INFO     | . log creation = 1 s
[2025-06-03 18:00:00] 2025-06-03 15:58:51,488 | INFO     | ..............................
[2025-06-03 18:00:00] 2025-06-03 15:58:52,077 | INFO     | 
[2025-06-03 18:00:00] 2025-06-03 15:58:52,077 | INFO     | job summary report
[2025-06-03 18:00:00] 2025-06-03 15:58:52,077 | INFO     | --------------------------------------------------
[2025-06-03 18:00:00] 2025-06-03 15:58:52,077 | INFO     | PanDA job id: 6677442119
[2025-06-03 18:00:00] 2025-06-03 15:58:52,077 | INFO     | task id: 45006595
[2025-06-03 18:00:00] 2025-06-03 15:58:52,078 | INFO     | errors: (none)
[2025-06-03 18:00:00] 2025-06-03 15:58:52,078 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:00:00] 2025-06-03 15:58:52,078 | INFO     | pilot state: finished 
[2025-06-03 18:00:00] 2025-06-03 15:58:52,078 | INFO     | transexitcode: 0
[2025-06-03 18:00:00] 2025-06-03 15:58:52,078 | INFO     | exeerrorcode: 0
[2025-06-03 18:00:00] 2025-06-03 15:58:52,078 | INFO     | exeerrordiag: 
[2025-06-03 18:00:00] 2025-06-03 15:58:52,078 | INFO     | exitcode: 0
[2025-06-03 18:00:00] 2025-06-03 15:58:52,078 | INFO     | exitmsg: OK
[2025-06-03 18:00:00] 2025-06-03 15:58:52,078 | INFO     | cpuconsumptiontime: 48883 s
[2025-06-03 18:00:00] 2025-06-03 15:58:52,078 | INFO     | nevents: 400
[2025-06-03 18:00:00] 2025-06-03 15:58:52,079 | INFO     | neventsw: 0
[2025-06-03 18:00:00] 2025-06-03 15:58:52,079 | INFO     | pid: 32109
[2025-06-03 18:00:00] 2025-06-03 15:58:52,079 | INFO     | pgrp: 32109
[2025-06-03 18:00:00] 2025-06-03 15:58:52,079 | INFO     | corecount: 8
[2025-06-03 18:00:00] 2025-06-03 15:58:52,079 | INFO     | event service: False
[2025-06-03 18:00:00] 2025-06-03 15:58:52,079 | INFO     | sizes: {0: 2405012, 1: 2405211, 10: 2405417, 12: 2405445, 13074: 2434896, 13078: 2443839, 13079: 2444023, 13153: 2444193}
[2025-06-03 18:00:00] 2025-06-03 15:58:52,079 | INFO     | --------------------------------------------------
[2025-06-03 18:00:00] 2025-06-03 15:58:52,079 | INFO     | 
[2025-06-03 18:00:00] 2025-06-03 15:58:52,079 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-06-03 18:00:00] 2025-06-03 15:58:52,465 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:00:00] 2025-06-03 15:58:52,466 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:00:00] 2025-06-03 15:58:52,466 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:00:00] 2025-06-03 15:58:52,466 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:00:00] 2025-06-03 15:58:52,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:00:00] 2025-06-03 15:58:52,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:00:00] 2025-06-03 15:58:52,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:00:00] 2025-06-03 15:58:52,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:00:00] 2025-06-03 15:58:52,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:00:00] 2025-06-03 15:58:52,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:00:00] 2025-06-03 15:58:52,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:00:00] 2025-06-03 15:58:52,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:00:00] 2025-06-03 15:58:52,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:00:00] 2025-06-03 15:58:52,467 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:00:00] 2025-06-03 15:58:52,467 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:00:00] 2025-06-03 15:58:52,467 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:00:00] 2025-06-03 15:58:52,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:00:00] 2025-06-03 15:58:52,467 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:00:00] 2025-06-03 15:58:52,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:00:00] 2025-06-03 15:58:52,467 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:00:00] 2025-06-03 15:58:52,468 | INFO     | job 6677442119 has completed (purged errors)
[2025-06-03 18:00:00] 2025-06-03 15:58:52,468 | INFO     | overall cleanup function is called
[2025-06-03 18:00:00] 2025-06-03 15:58:53,477 | INFO     | --- collectZombieJob: --- 10, [32109]
[2025-06-03 18:00:00] 2025-06-03 15:58:53,477 | INFO     | zombie collector waiting for pid 32109
[2025-06-03 18:00:00] 2025-06-03 15:58:53,477 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:00:00] 2025-06-03 15:58:53,477 | INFO     | collected zombie processes
[2025-06-03 18:00:00] 2025-06-03 15:58:53,477 | INFO     | will attempt to kill all subprocesses of pid=32109
[2025-06-03 18:00:00] 2025-06-03 15:58:53,577 | INFO     | process IDs to be killed: [32109] (in reverse order)
[2025-06-03 18:00:00] 2025-06-03 15:58:54,371 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:00:00] 2025-06-03 15:58:54,372 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:00:00] 2025-06-03 15:58:54,375 | INFO     | did not find any defunct processes belonging to 32109
[2025-06-03 18:00:00] 2025-06-03 15:58:54,378 | INFO     | did not find any defunct processes belonging to 32109
[2025-06-03 18:00:00] 2025-06-03 15:58:54,378 | INFO     | ready for new job
[2025-06-03 18:00:00] 2025-06-03 15:58:54,379 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:00:00] 2025-06-03 15:58:54,380 | INFO     | **************************************
[2025-06-03 18:00:00] 2025-06-03 15:58:54,381 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:00:00] 2025-06-03 15:58:54,381 | INFO     | **************************************
[2025-06-03 18:00:00] 2025-06-03 15:58:54,381 | INFO     | 
[2025-06-03 18:00:00] 2025-06-03 15:58:54,382 | INFO     | pilot is running in a VM
[2025-06-03 18:00:00] 2025-06-03 15:58:54,382 | INFO     | architecture information:
[2025-06-03 18:00:00] 2025-06-03 15:58:54,385 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:00:00] 2025-06-03 15:58:54,524 | INFO     | cat /etc/os-release:
[2025-06-03 18:00:00] NAME="CentOS Linux"
[2025-06-03 18:00:00] VERSION="7 (Core)"
[2025-06-03 18:00:00] ID="centos"
[2025-06-03 18:00:00] ID_LIKE="rhel fedora"
[2025-06-03 18:00:00] VERSION_ID="7"
[2025-06-03 18:00:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:00:00] ANSI_COLOR="0;31"
[2025-06-03 18:00:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:00:00] HOME_URL="https://www.centos.org/"
[2025-06-03 18:00:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:00:00] 
[2025-06-03 18:00:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:00:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:00:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:00:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:00:00] 
[2025-06-03 18:00:00] 2025-06-03 15:58:54,525 | INFO     | **************************************
[2025-06-03 18:00:00] 2025-06-03 15:58:55,029 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-06-03 18:00:00] 2025-06-03 15:58:55,204 | INFO     | sufficient remaining disk space (497213767680 B)
[2025-06-03 18:00:00] 2025-06-03 15:58:55,204 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:00:00] 2025-06-03 15:58:55,204 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:00:00] 2025-06-03 15:58:55,204 | INFO     | update_server=False
[2025-06-03 18:00:00] 2025-06-03 15:58:55,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:00:00] 2025-06-03 15:58:55,213 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:00:00] 2025-06-03 15:58:55,229 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:00:00] 2025-06-03 15:58:55,521 | INFO     | all data control threads have been joined
[2025-06-03 18:00:00] 2025-06-03 15:58:55,839 | INFO     | all payload control threads have been joined
[2025-06-03 18:00:00] 2025-06-03 15:58:56,102 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:00:00] 2025-06-03 15:58:56,102 | INFO     | aborting loop
[2025-06-03 18:00:00] 2025-06-03 15:58:56,200 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:00:00] 2025-06-03 15:58:56,200 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:00:00] 2025-06-03 15:58:56,200 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:00:00] 2025-06-03 15:58:56,211 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:00:00] 2025-06-03 15:58:56,278 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:00:00] 2025-06-03 15:58:56,326 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:00:00] 2025-06-03 15:58:56,347 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:00:00] 2025-06-03 15:58:56,355 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:00:00] 2025-06-03 15:58:56,504 | INFO     | all job control threads have been joined
[2025-06-03 18:00:00] 2025-06-03 15:58:56,512 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:00:00] 2025-06-03 15:58:56,527 | INFO     | [data] control thread has finished
[2025-06-03 18:00:00] 2025-06-03 15:58:56,644 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:00:00] 2025-06-03 15:58:56,818 | INFO     | [job] validate thread has finished
[2025-06-03 18:00:00] 2025-06-03 15:58:56,845 | INFO     | [payload] control thread has finished
[2025-06-03 18:00:00] 2025-06-03 15:58:56,875 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:00:00] 2025-06-03 15:58:57,108 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:00:00] 2025-06-03 15:58:57,133 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:00:00] 2025-06-03 15:58:57,220 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:00:00] 2025-06-03 15:58:57,510 | INFO     | [job] control thread has finished
[2025-06-03 18:00:00] 2025-06-03 15:58:57,650 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:00:00] 2025-06-03 15:58:59,238 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:00:00] 2025-06-03 15:59:00,640 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140615371446080)>', '<ExcThread(monitor, started 140614922389248)>']
[2025-06-03 18:00:00] 2025-06-03 15:59:01,230 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:00:00] 2025-06-03 15:59:01,230 | INFO     | [monitor] control thread has ended
[2025-06-03 18:00:00] 2025-06-03 15:59:05,666 | INFO     | all workflow threads have been joined
[2025-06-03 18:00:00] 2025-06-03 15:59:05,666 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:00:00] 2025-06-03 15:59:05,666 | INFO     | traces error code: 0
[2025-06-03 18:00:00] 2025-06-03 15:59:05,667 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:00:00] 2025-06-03 15:59:05,960 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:00:00] 2025-06-03 15:59:05,996 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:00:00] 2025-06-03 15:59:06,072 [wrapper] pilotpid: 23869
[2025-06-03 18:00:00] 2025-06-03 15:59:06,162 [wrapper] Pilot exit status: 0
[2025-06-03 18:00:00] 2025-06-03 15:59:06,718 [wrapper] pandaids: 6677442119
[2025-06-03 18:00:00] 2025-06-03 15:59:07,533 [wrapper] cleanup supervisor_pilot 20114 23870
[2025-06-03 18:00:00] 2025-06-03 15:59:07,607 [wrapper] Test setup, not cleaning
[2025-06-03 18:00:00] 2025-06-03 15:59:07,708 [wrapper] apfmon messages muted
[2025-06-03 18:00:00] 2025-06-03 15:59:07,743 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:00:00] 2025-06-03 15:59:07,819 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:00:00]  *** Error codes and diagnostics ***
[2025-06-03 18:00:00]     "exeErrorCode": 0,
[2025-06-03 18:00:00]     "exeErrorDiag": "",
[2025-06-03 18:00:00]     "pilotErrorCode": 0,
[2025-06-03 18:00:00]     "pilotErrorDiag": "",
[2025-06-03 18:00:00]  *** Listing of results directory ***
[2025-06-03 18:00:00] total 388224
[2025-06-03 18:00:00] -rw-r--r--. 1 boinc boinc    495897 Jun  3 03:09 pilot3.tar.gz
[2025-06-03 18:00:00] -rw-r--r--. 1 boinc boinc      5111 Jun  3 03:15 queuedata.json
[2025-06-03 18:00:00] -rwx------. 1 boinc boinc     37140 Jun  3 03:16 runpilot2-wrapper.sh
[2025-06-03 18:00:00] -rw-r--r--. 1 boinc boinc       100 Jun  3 14:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:00:00] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 14:18 run_atlas
[2025-06-03 18:00:00] -rw-r--r--. 1 boinc boinc       105 Jun  3 14:18 job.xml
[2025-06-03 18:00:00] -rw-r--r--. 1 boinc boinc      6393 Jun  3 14:18 init_data.xml
[2025-06-03 18:00:00] -rw-r--r--. 2 boinc boinc 213337053 Jun  3 14:18 EVNT.45006593._000647.pool.root.1
[2025-06-03 18:00:00] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:18 start_atlas.sh
[2025-06-03 18:00:00] drwxrwx--x. 2 boinc boinc        68 Jun  3 14:18 shared
[2025-06-03 18:00:00] -rw-r--r--. 2 boinc boinc    508881 Jun  3 14:18 input.tar.gz
[2025-06-03 18:00:00] -rw-r--r--. 1 boinc boinc         0 Jun  3 14:18 boinc_lockfile
[2025-06-03 18:00:00] -rw-r--r--. 1 boinc boinc      2524 Jun  3 14:18 pandaJob.out
[2025-06-03 18:00:00] -rw-------. 1 boinc boinc    982666 Jun  3 14:19 agis_schedconf.cvmfs.json
[2025-06-03 18:00:00] drwx------. 4 boinc boinc      4096 Jun  3 14:19 pilot3
[2025-06-03 18:00:00] -rw-------. 1 boinc boinc 177319932 Jun  3 17:56 HITS.45006595._016174.pool.root.1
[2025-06-03 18:00:00] -rw-r--r--. 1 boinc boinc       530 Jun  3 17:56 boinc_task_state.xml
[2025-06-03 18:00:00] -rw-------. 1 boinc boinc      1019 Jun  3 17:57 memory_monitor_summary.json
[2025-06-03 18:00:00] -rw-------. 1 boinc boinc   1603667 Jun  3 17:57 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:00:00] -rw-------. 1 boinc boinc    389034 Jun  3 17:57 log.45006595._016174.job.log.tgz.1
[2025-06-03 18:00:00] -rw-------. 1 boinc boinc        95 Jun  3 17:58 pilot_heartbeat.json
[2025-06-03 18:00:00] -rw-------. 1 boinc boinc      7706 Jun  3 17:58 heartbeat.json
[2025-06-03 18:00:00] -rw-------. 1 boinc boinc      4417 Jun  3 17:59 pilotlog.txt
[2025-06-03 18:00:00] -rw-------. 1 boinc boinc   1146616 Jun  3 17:59 log.45006595._016174.job.log.1
[2025-06-03 18:00:00] -rw-------. 1 boinc boinc       357 Jun  3 17:59 output.list
[2025-06-03 18:00:00] -rw-r--r--. 1 boinc boinc       620 Jun  3 17:59 runtime_log
[2025-06-03 18:00:00] -rw-------. 1 boinc boinc   1556480 Jun  3 17:59 result.tar.gz
[2025-06-03 18:00:00] -rw-r--r--. 1 boinc boinc      8673 Jun  3 17:59 runtime_log.err
[2025-06-03 18:00:00] -rw-------. 1 boinc boinc       656 Jun  3 17:59 Bm7MDmtRVg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6NhKDm8xlYXm.diag
[2025-06-03 18:00:00] -rw-r--r--. 1 boinc boinc      8192 Jun  3 18:00 boinc_mmap_file
[2025-06-03 18:00:00] -rw-r--r--. 1 boinc boinc        28 Jun  3 18:00 wrapper_checkpoint.txt
[2025-06-03 18:00:00] -rw-r--r--. 1 boinc boinc     20486 Jun  3 18:00 stderr.txt
[2025-06-03 18:00:00] HITS file was successfully produced:
[2025-06-03 18:00:00] -rw-------. 1 boinc boinc 177319932 Jun  3 17:56 shared/HITS.pool.root.1
[2025-06-03 18:00:00]  *** Contents of shared directory: ***
[2025-06-03 18:00:00] total 383540
[2025-06-03 18:00:00] -rw-r--r--. 2 boinc boinc 213337053 Jun  3 14:18 ATLAS.root_0
[2025-06-03 18:00:00] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:18 start_atlas.sh
[2025-06-03 18:00:00] -rw-r--r--. 2 boinc boinc    508881 Jun  3 14:18 input.tar.gz
[2025-06-03 18:00:00] -rw-------. 1 boinc boinc 177319932 Jun  3 17:56 HITS.pool.root.1
[2025-06-03 18:00:00] -rw-------. 1 boinc boinc   1556480 Jun  3 17:59 result.tar.gz
18:00:02 (20141): run_atlas exited; CPU time 49052.191368
18:00:02 (20141): called boinc_finish(0)

</stderr_txt>
]]>

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