Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:01:10 (3225162): wrapper (7.7.26015): starting
05:01:10 (3225162): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 05:01:10] Arguments: --nthreads 4
[2025-06-05 05:01:10] Threads: 4
[2025-06-05 05:01:10] Checking for CVMFS
[2025-06-05 05:01:10] No cvmfs_config command found, will try listing directly
[2025-06-05 05:01:10] CVMFS is ok
[2025-06-05 05:01:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 05:01:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 05:01:10] Further information can be found at the LHC@home message board.
[2025-06-05 05:01:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:01:10] Checking for apptainer binary...
[2025-06-05 05:01:10] which: no apptainer in ((null))
[2025-06-05 05:01:10] apptainer is not installed, using version from CVMFS
[2025-06-05 05:01:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:01:10] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment ugluk10.grid.cesnet.cz
[2025-06-05 05:01:10] apptainer works
[2025-06-05 05:01:10] Set ATHENA_PROC_NUMBER=4
[2025-06-05 05:01:10] Set ATHENA_CORE_NUMBER=4
[2025-06-05 05:01:10] Starting ATLAS job with PandaID=6677441664
[2025-06-05 05:01:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:18:53]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:18:53] 2025-06-05 06:05:54,258 | INFO     | total number of processed events: 400 (read)
[2025-06-05 08:18:53] 2025-06-05 06:05:54,261 | INFO     | executing command: lscpu
[2025-06-05 08:18:53] 2025-06-05 06:05:54,301 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 08:18:53] 2025-06-05 06:05:56,449 | INFO     | monitor loop #818: job 0:6677441664 is in state 'finished'
[2025-06-05 08:18:53] 2025-06-05 06:05:56,449 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:18:53] 2025-06-05 06:05:57,576 | INFO     | PID=3231981 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 08:18:53] 2025-06-05 06:05:57,576 | INFO     | .. there are 4 such processes running
[2025-06-05 08:18:53] 2025-06-05 06:05:57,818 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 08:18:53] 2025-06-05 06:05:57,818 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6677441664/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:18:53] 2025-06-05 06:05:57,819 | INFO     | extracted standard info from prmon json
[2025-06-05 08:18:53] 2025-06-05 06:05:57,819 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:18:53] 2025-06-05 06:05:57,819 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:18:53] 2025-06-05 06:05:57,820 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:18:53] 2025-06-05 06:05:57,820 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:18:53] 2025-06-05 06:05:57,824 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:18:53] 2025-06-05 06:05:57,824 | INFO     | sum of square deviations: 1838657730.0
[2025-06-05 08:18:53] 2025-06-05 06:05:57,825 | INFO     | sum of deviations: 21623855474.000008
[2025-06-05 08:18:53] 2025-06-05 06:05:57,825 | INFO     | mean x: 1749097995.0
[2025-06-05 08:18:53] 2025-06-05 06:05:57,825 | INFO     | mean y: 2322015.867403315
[2025-06-05 08:18:53] 2025-06-05 06:05:57,825 | INFO     | -- intersect: -20568250547.27255
[2025-06-05 08:18:53] 2025-06-05 06:05:57,826 | INFO     | intersect: -20568250547.27255
[2025-06-05 08:18:53] 2025-06-05 06:05:57,826 | INFO     | chi2: 1.625300478959297
[2025-06-05 08:18:53] 2025-06-05 06:05:57,826 | INFO     | sum of square deviations: 1690450300.0
[2025-06-05 08:18:53] 2025-06-05 06:05:57,827 | INFO     | sum of deviations: 20911710608.0
[2025-06-05 08:18:53] 2025-06-05 06:05:57,828 | INFO     | mean x: 1749097842.5
[2025-06-05 08:18:53] 2025-06-05 06:05:57,828 | INFO     | mean y: 2321282.840909091
[2025-06-05 08:18:53] 2025-06-05 06:05:57,828 | INFO     | -- intersect: -21634888582.150192
[2025-06-05 08:18:53] 2025-06-05 06:05:57,828 | INFO     | intersect: -21634888582.150192
[2025-06-05 08:18:53] 2025-06-05 06:05:57,828 | INFO     | chi2: 1.626791455534579
[2025-06-05 08:18:53] 2025-06-05 06:05:57,828 | INFO     | current chi2=1.626791455534579 (change=-0.09173544182037399 %)
[2025-06-05 08:18:53] 2025-06-05 06:05:57,829 | INFO     | right removable region: 175
[2025-06-05 08:18:53] 2025-06-05 06:05:57,829 | INFO     | sum of square deviations: 1690450300.0
[2025-06-05 08:18:53] 2025-06-05 06:05:57,830 | INFO     | sum of deviations: -6316520659.0
[2025-06-05 08:18:53] 2025-06-05 06:05:57,830 | INFO     | mean x: 1749098147.5
[2025-06-05 08:18:53] 2025-06-05 06:05:57,830 | INFO     | mean y: 2350436.340909091
[2025-06-05 08:18:53] 2025-06-05 06:05:57,830 | INFO     | -- intersect: 6538014089.571281
[2025-06-05 08:18:53] 2025-06-05 06:05:57,830 | INFO     | intersect: 6538014089.571281
[2025-06-05 08:18:53] 2025-06-05 06:05:57,831 | INFO     | chi2: 0.05471884741705954
[2025-06-05 08:18:53] 2025-06-05 06:05:57,831 | INFO     | current chi2=0.05471884741705954 (change=96.63330884809086 %)
[2025-06-05 08:18:53] 2025-06-05 06:05:57,831 | INFO     | sum of square deviations: 1550429070.0
[2025-06-05 08:18:53] 2025-06-05 06:05:57,832 | INFO     | sum of deviations: -3361927587.0
[2025-06-05 08:18:53] 2025-06-05 06:05:57,832 | INFO     | mean x: 1749098300.0
[2025-06-05 08:18:53] 2025-06-05 06:05:57,833 | INFO     | mean y: 2347194.9356725146
[2025-06-05 08:18:53] 2025-06-05 06:05:57,833 | INFO     | -- intersect: 3795066217.6413045
[2025-06-05 08:18:53] 2025-06-05 06:05:57,833 | INFO     | intersect: 3795066217.6413045
[2025-06-05 08:18:53] 2025-06-05 06:05:57,833 | INFO     | chi2: 0.043628286539495346
[2025-06-05 08:18:53] 2025-06-05 06:05:57,833 | INFO     | current chi2=0.043628286539495346 (change=20.268264777277675 %)
[2025-06-05 08:18:53] 2025-06-05 06:05:57,833 | INFO     | left removable region: 20
[2025-06-05 08:18:53] 2025-06-05 06:05:57,834 | INFO     | sum of square deviations: 1154663510.0
[2025-06-05 08:18:53] 2025-06-05 06:05:57,835 | INFO     | sum of deviations: 3895369842.000001
[2025-06-05 08:18:53] 2025-06-05 06:05:57,835 | INFO     | mean x: 1749098422.0
[2025-06-05 08:18:53] 2025-06-05 06:05:57,835 | INFO     | mean y: 2337898.7032258064
[2025-06-05 08:18:53] 2025-06-05 06:05:57,835 | INFO     | -- intersect: -5898416030.680574
[2025-06-05 08:18:53] 2025-06-05 06:05:57,835 | INFO     | intersect: -5898416030.680574
[2025-06-05 08:18:53] 2025-06-05 06:05:57,835 | INFO     | chi2: 0.0012424780717073978
[2025-06-05 08:18:53] 2025-06-05 06:05:57,836 | INFO     | -- intersect: -5898416030.680574
[2025-06-05 08:18:53] 2025-06-05 06:05:57,836 | INFO     | current memory leak: 3.37 B/s (using 155 data points, chi2=0.00)
[2025-06-05 08:18:53] 2025-06-05 06:05:57,836 | INFO     | ..............................
[2025-06-05 08:18:53] 2025-06-05 06:05:57,836 | INFO     | . Timing measurements:
[2025-06-05 08:18:53] 2025-06-05 06:05:57,836 | INFO     | . get job = 0 s
[2025-06-05 08:18:53] 2025-06-05 06:05:57,837 | INFO     | . initial setup = 1 s
[2025-06-05 08:18:53] 2025-06-05 06:05:57,837 | INFO     | . payload setup = 6 s
[2025-06-05 08:18:53] 2025-06-05 06:05:57,837 | INFO     | . stage-in = 0 s
[2025-06-05 08:18:53] 2025-06-05 06:05:57,837 | INFO     | . payload execution = 11042 s
[2025-06-05 08:18:53] 2025-06-05 06:05:57,837 | INFO     | . stage-out = 1 s
[2025-06-05 08:18:53] 2025-06-05 06:05:57,837 | INFO     | . log creation = 0 s
[2025-06-05 08:18:53] 2025-06-05 06:05:57,837 | INFO     | ..............................
[2025-06-05 08:18:53] 2025-06-05 06:05:58,116 | INFO     | 
[2025-06-05 08:18:53] 2025-06-05 06:05:58,116 | INFO     | job summary report
[2025-06-05 08:18:53] 2025-06-05 06:05:58,116 | INFO     | --------------------------------------------------
[2025-06-05 08:18:53] 2025-06-05 06:05:58,116 | INFO     | PanDA job id: 6677441664
[2025-06-05 08:18:53] 2025-06-05 06:05:58,116 | INFO     | task id: 45006595
[2025-06-05 08:18:53] 2025-06-05 06:05:58,116 | INFO     | errors: (none)
[2025-06-05 08:18:53] 2025-06-05 06:05:58,117 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:18:53] 2025-06-05 06:05:58,117 | INFO     | pilot state: finished 
[2025-06-05 08:18:53] 2025-06-05 06:05:58,117 | INFO     | transexitcode: 0
[2025-06-05 08:18:53] 2025-06-05 06:05:58,117 | INFO     | exeerrorcode: 0
[2025-06-05 08:18:53] 2025-06-05 06:05:58,117 | INFO     | exeerrordiag: 
[2025-06-05 08:18:53] 2025-06-05 06:05:58,117 | INFO     | exitcode: 0
[2025-06-05 08:18:53] 2025-06-05 06:05:58,117 | INFO     | exitmsg: OK
[2025-06-05 08:18:53] 2025-06-05 06:05:58,117 | INFO     | cpuconsumptiontime: 42362 s
[2025-06-05 08:18:53] 2025-06-05 06:05:58,117 | INFO     | nevents: 400
[2025-06-05 08:18:53] 2025-06-05 06:05:58,118 | INFO     | neventsw: 0
[2025-06-05 08:18:53] 2025-06-05 06:05:58,118 | INFO     | pid: 3245768
[2025-06-05 08:18:53] 2025-06-05 06:05:58,118 | INFO     | pgrp: 3245768
[2025-06-05 08:18:53] 2025-06-05 06:05:58,118 | INFO     | corecount: 4
[2025-06-05 08:18:53] 2025-06-05 06:05:58,118 | INFO     | event service: False
[2025-06-05 08:18:53] 2025-06-05 06:05:58,118 | INFO     | sizes: {0: 2397174, 1: 2397373, 5: 2397579, 12: 2397635, 11052: 2426613, 11054: 2435576, 11057: 2435760, 11064: 2435930}
[2025-06-05 08:18:53] 2025-06-05 06:05:58,118 | INFO     | --------------------------------------------------
[2025-06-05 08:18:53] 2025-06-05 06:05:58,118 | INFO     | 
[2025-06-05 08:18:53] 2025-06-05 06:05:58,119 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-06-05 08:18:53] 2025-06-05 06:05:58,138 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:18:53] 2025-06-05 06:05:58,138 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:18:53] 2025-06-05 06:05:58,138 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:18:53] 2025-06-05 06:05:58,138 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:18:53] 2025-06-05 06:05:58,138 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:18:53] 2025-06-05 06:05:58,138 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:18:53] 2025-06-05 06:05:58,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:18:53] 2025-06-05 06:05:58,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:18:53] 2025-06-05 06:05:58,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:18:53] 2025-06-05 06:05:58,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:18:53] 2025-06-05 06:05:58,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:18:53] 2025-06-05 06:05:58,139 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:18:53] 2025-06-05 06:05:58,139 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:18:53] 2025-06-05 06:05:58,139 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:18:53] 2025-06-05 06:05:58,139 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:18:53] 2025-06-05 06:05:58,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:18:53] 2025-06-05 06:05:58,140 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:18:53] 2025-06-05 06:05:58,140 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:18:53] 2025-06-05 06:05:58,140 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:18:53] 2025-06-05 06:05:58,140 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:18:53] 2025-06-05 06:05:58,140 | INFO     | job 6677441664 has completed (purged errors)
[2025-06-05 08:18:53] 2025-06-05 06:05:58,140 | INFO     | overall cleanup function is called
[2025-06-05 08:18:53] 2025-06-05 06:05:59,148 | INFO     | --- collectZombieJob: --- 10, [3245768]
[2025-06-05 08:18:53] 2025-06-05 06:05:59,149 | INFO     | zombie collector waiting for pid 3245768
[2025-06-05 08:18:53] 2025-06-05 06:05:59,149 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:18:53] 2025-06-05 06:05:59,149 | INFO     | collected zombie processes
[2025-06-05 08:18:53] 2025-06-05 06:05:59,149 | INFO     | will attempt to kill all subprocesses of pid=3245768
[2025-06-05 08:18:53] 2025-06-05 06:05:59,381 | INFO     | process IDs to be killed: [3245768] (in reverse order)
[2025-06-05 08:18:53] 2025-06-05 06:05:59,457 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:18:53] 2025-06-05 06:05:59,458 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:18:53] 2025-06-05 06:05:59,464 | INFO     | did not find any defunct processes belonging to 3245768
[2025-06-05 08:18:53] 2025-06-05 06:05:59,471 | INFO     | did not find any defunct processes belonging to 3245768
[2025-06-05 08:18:53] 2025-06-05 06:05:59,471 | INFO     | ready for new job
[2025-06-05 08:18:53] 2025-06-05 06:05:59,471 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:18:53] 2025-06-05 06:05:59,473 | INFO     | **************************************
[2025-06-05 08:18:53] 2025-06-05 06:05:59,473 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:18:53] 2025-06-05 06:05:59,473 | INFO     | **************************************
[2025-06-05 08:18:53] 2025-06-05 06:05:59,473 | INFO     | 
[2025-06-05 08:18:53] 2025-06-05 06:05:59,476 | INFO     | architecture information:
[2025-06-05 08:18:53] 2025-06-05 06:05:59,476 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:18:53] 2025-06-05 06:05:59,491 | INFO     | cat /etc/os-release:
[2025-06-05 08:18:53] NAME="CentOS Linux"
[2025-06-05 08:18:53] VERSION="7 (Core)"
[2025-06-05 08:18:53] ID="centos"
[2025-06-05 08:18:53] ID_LIKE="rhel fedora"
[2025-06-05 08:18:53] VERSION_ID="7"
[2025-06-05 08:18:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:18:53] ANSI_COLOR="0;31"
[2025-06-05 08:18:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:18:53] HOME_URL="https://www.centos.org/"
[2025-06-05 08:18:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:18:53] 
[2025-06-05 08:18:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:18:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:18:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:18:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:18:53] 
[2025-06-05 08:18:53] 2025-06-05 06:05:59,491 | INFO     | **************************************
[2025-06-05 08:18:53] 2025-06-05 06:05:59,994 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-06-05 08:18:53] 2025-06-05 06:06:00,008 | INFO     | sufficient remaining disk space (3466259857408 B)
[2025-06-05 08:18:53] 2025-06-05 06:06:00,009 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:18:53] 2025-06-05 06:06:00,009 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:18:53] 2025-06-05 06:06:00,009 | INFO     | update_server=False
[2025-06-05 08:18:53] 2025-06-05 06:06:00,009 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:18:53] 2025-06-05 06:06:00,009 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 08:18:53] 2025-06-05 06:06:00,010 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:18:53] 2025-06-05 06:06:00,010 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:18:53] 2025-06-05 06:06:00,010 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:18:53] 2025-06-05 06:06:00,010 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:18:53] 2025-06-05 06:06:00,010 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:18:53] 2025-06-05 06:06:00,011 | INFO     | aborting loop
[2025-06-05 08:18:53] 2025-06-05 06:06:00,177 | INFO     | all job control threads have been joined
[2025-06-05 08:18:53] 2025-06-05 06:06:00,296 | INFO     | all payload control threads have been joined
[2025-06-05 08:18:53] 2025-06-05 06:06:00,491 | INFO     | all data control threads have been joined
[2025-06-05 08:18:53] 2025-06-05 06:06:01,011 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:18:53] 2025-06-05 06:06:01,015 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:18:53] 2025-06-05 06:06:01,060 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:18:53] 2025-06-05 06:06:01,182 | INFO     | [job] control thread has finished
[2025-06-05 08:18:53] 2025-06-05 06:06:01,302 | INFO     | [payload] control thread has finished
[2025-06-05 08:18:53] 2025-06-05 06:06:01,320 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:18:53] 2025-06-05 06:06:01,496 | INFO     | [data] control thread has finished
[2025-06-05 08:18:53] 2025-06-05 06:06:01,570 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:18:53] 2025-06-05 06:06:01,660 | INFO     | [job] validate thread has finished
[2025-06-05 08:18:53] 2025-06-05 06:06:01,863 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:18:53] 2025-06-05 06:06:01,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:18:53] 2025-06-05 06:06:01,944 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:18:53] 2025-06-05 06:06:02,017 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:18:53] 2025-06-05 06:06:02,319 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:18:53] 2025-06-05 06:06:02,434 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:18:53] 2025-06-05 06:06:02,954 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:18:53] 2025-06-05 06:06:03,959 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:18:53] 2025-06-05 06:06:05,931 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:18:53] 2025-06-05 06:06:06,708 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22865029764928)>', '<ExcThread(monitor, started 22864581334784)>']
[2025-06-05 08:18:53] 2025-06-05 06:06:07,045 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:18:53] 2025-06-05 06:06:07,045 | INFO     | [monitor] control thread has ended
[2025-06-05 08:18:53] 2025-06-05 06:06:11,728 | INFO     | all workflow threads have been joined
[2025-06-05 08:18:53] 2025-06-05 06:06:11,728 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:18:53] 2025-06-05 06:06:11,729 | INFO     | traces error code: 0
[2025-06-05 08:18:53] 2025-06-05 06:06:11,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:18:53] 2025-06-05 06:06:11,875 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:18:53] 2025-06-05 06:06:11,877 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:18:53] 2025-06-05 06:06:11,880 [wrapper] pilotpid: 3231981
[2025-06-05 08:18:53] 2025-06-05 06:06:11,882 [wrapper] Pilot exit status: 0
[2025-06-05 08:18:53] 2025-06-05 06:06:11,891 [wrapper] pandaids: 6677441664
[2025-06-05 08:18:53] 2025-06-05 06:06:11,934 [wrapper] cleanup supervisor_pilot 3425962 3231982
[2025-06-05 08:18:53] 2025-06-05 06:06:11,937 [wrapper] Test setup, not cleaning
[2025-06-05 08:18:53] 2025-06-05 06:06:11,939 [wrapper] apfmon messages muted
[2025-06-05 08:18:53] 2025-06-05 06:06:11,942 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:18:53] 2025-06-05 06:06:11,944 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:18:53]  *** Error codes and diagnostics ***
[2025-06-05 08:18:53]     "exeErrorCode": 0,
[2025-06-05 08:18:53]     "exeErrorDiag": "",
[2025-06-05 08:18:53]     "pilotErrorCode": 0,
[2025-06-05 08:18:53]     "pilotErrorDiag": "",
[2025-06-05 08:18:53]  *** Listing of results directory ***
[2025-06-05 08:18:53] total 389316
[2025-06-05 08:18:53] -rw-r--r-- 1 boinc boinc    495897 Jun  3 02:46 pilot3.tar.gz
[2025-06-05 08:18:53] -rw-r--r-- 1 boinc boinc      5111 Jun  3 03:05 queuedata.json
[2025-06-05 08:18:53] -rwx------ 1 boinc boinc     37140 Jun  3 03:05 runpilot2-wrapper.sh
[2025-06-05 08:18:53] -rw-r--r-- 1 boinc boinc       100 Jun  5 05:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:18:53] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 05:01 run_atlas
[2025-06-05 08:18:53] -rw-r--r-- 1 boinc boinc       105 Jun  5 05:01 job.xml
[2025-06-05 08:18:53] -rw-r--r-- 2 boinc boinc 214399407 Jun  5 05:01 EVNT.45006593._000637.pool.root.1
[2025-06-05 08:18:53] -rw-r--r-- 1 boinc boinc      6418 Jun  5 05:01 init_data.xml
[2025-06-05 08:18:53] -rw-r--r-- 2 boinc boinc     15093 Jun  5 05:01 start_atlas.sh
[2025-06-05 08:18:53] drwxrwx--x 2 boinc boinc      4096 Jun  5 05:01 shared
[2025-06-05 08:18:53] -rw-r--r-- 2 boinc boinc    508874 Jun  5 05:01 input.tar.gz
[2025-06-05 08:18:53] -rw-r--r-- 1 boinc boinc         0 Jun  5 05:01 boinc_lockfile
[2025-06-05 08:18:53] -rw-r--r-- 1 boinc boinc      2521 Jun  5 05:01 pandaJob.out
[2025-06-05 08:18:53] -rw------- 1 boinc boinc    987109 Jun  5 05:01 agis_schedconf.cvmfs.json
[2025-06-05 08:18:53] drwx------ 4 boinc boinc      4096 Jun  5 05:01 pilot3
[2025-06-05 08:18:53] -rw------- 1 boinc boinc 177747273 Jun  5 08:05 HITS.45006595._015904.pool.root.1
[2025-06-05 08:18:53] -rw-r--r-- 1 boinc boinc       528 Jun  5 08:05 boinc_task_state.xml
[2025-06-05 08:18:53] -rw------- 1 boinc boinc      1033 Jun  5 08:05 memory_monitor_summary.json
[2025-06-05 08:18:53] -rw------- 1 boinc boinc        95 Jun  5 08:05 pilot_heartbeat.json
[2025-06-05 08:18:53] -rw------- 1 boinc boinc   1598969 Jun  5 08:05 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:18:53] -rw------- 1 boinc boinc    288797 Jun  5 08:05 log.45006595._015904.job.log.tgz.1
[2025-06-05 08:18:53] -rw------- 1 boinc boinc      7717 Jun  5 08:05 heartbeat.json
[2025-06-05 08:18:53] -rw------- 1 boinc boinc      4487 Jun  5 08:06 pilotlog.txt
[2025-06-05 08:18:53] -rw------- 1 boinc boinc   1051354 Jun  5 08:06 log.45006595._015904.job.log.1
[2025-06-05 08:18:53] -rw------- 1 boinc boinc       357 Jun  5 08:06 output.list
[2025-06-05 08:18:53] -rw-r--r-- 1 boinc boinc       620 Jun  5 08:06 runtime_log
[2025-06-05 08:18:53] -rw------- 1 boinc boinc   1361920 Jun  5 08:06 result.tar.gz
[2025-06-05 08:18:53] -rw-r--r-- 1 boinc boinc      9021 Jun  5 08:06 runtime_log.err
[2025-06-05 08:18:53] -rw------- 1 boinc boinc       664 Jun  5 08:06 UvLNDmzGVg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaLhKDmBw5YOn.diag
[2025-06-05 08:18:53] -rw-r--r-- 1 boinc boinc        26 Jun  5 08:18 wrapper_checkpoint.txt
[2025-06-05 08:18:53] -rw-r--r-- 1 boinc boinc      8192 Jun  5 08:18 boinc_mmap_file
[2025-06-05 08:18:53] -rw-r--r-- 1 boinc boinc     20997 Jun  5 08:18 stderr.txt
[2025-06-05 08:18:53] HITS file was successfully produced:
[2025-06-05 08:18:53] -rw------- 1 boinc boinc 177747273 Jun  5 08:05 shared/HITS.pool.root.1
[2025-06-05 08:18:53]  *** Contents of shared directory: ***
[2025-06-05 08:18:53] total 384812
[2025-06-05 08:18:53] -rw-r--r-- 2 boinc boinc 214399407 Jun  5 05:01 ATLAS.root_0
[2025-06-05 08:18:53] -rw-r--r-- 2 boinc boinc     15093 Jun  5 05:01 start_atlas.sh
[2025-06-05 08:18:53] -rw-r--r-- 2 boinc boinc    508874 Jun  5 05:01 input.tar.gz
[2025-06-05 08:18:53] -rw------- 1 boinc boinc 177747273 Jun  5 08:05 HITS.pool.root.1
[2025-06-05 08:18:53] -rw------- 1 boinc boinc   1361920 Jun  5 08:06 result.tar.gz
08:18:55 (3225162): run_atlas exited; CPU time 42682.558653
08:18:55 (3225162): called boinc_finish(0)

</stderr_txt>
]]>

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