Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:23:26 (2303291): wrapper (7.7.26015): starting
08:23:26 (2303291): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 08:23:26] Arguments: --nthreads 4
[2025-06-05 08:23:26] Threads: 4
[2025-06-05 08:23:26] Checking for CVMFS
[2025-06-05 08:23:26] No cvmfs_config command found, will try listing directly
[2025-06-05 08:23:26] CVMFS is ok
[2025-06-05 08:23:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 08:23:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 08:23:26] Further information can be found at the LHC@home message board.
[2025-06-05 08:23:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 08:23:26] Checking for apptainer binary...
[2025-06-05 08:23:26] which: no apptainer in ((null))
[2025-06-05 08:23:26] apptainer is not installed, using version from CVMFS
[2025-06-05 08:23:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 08:23:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2025-06-05 08:23:26] apptainer works
[2025-06-05 08:23:26] Set ATHENA_PROC_NUMBER=4
[2025-06-05 08:23:26] Set ATHENA_CORE_NUMBER=4
[2025-06-05 08:23:26] Starting ATLAS job with PandaID=6677441900
[2025-06-05 08:23:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 11:52:58]  *** The last 200 lines of the pilot log: ***
[2025-06-05 11:52:58] 2025-06-05 09:51:10,963 | INFO     | job 6677441900 has finished - writing final server update
[2025-06-05 11:52:58] 2025-06-05 09:51:10,963 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2296164/.job.ad'
[2025-06-05 11:52:58] 2025-06-05 09:51:10,963 | INFO     | total number of processed events: 400 (read)
[2025-06-05 11:52:58] 2025-06-05 09:51:10,966 | INFO     | executing command: lscpu
[2025-06-05 11:52:58] 2025-06-05 09:51:11,011 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 11:52:58] 2025-06-05 09:51:12,977 | INFO     | monitor loop #913: job 0:6677441900 is in state 'finished'
[2025-06-05 11:52:58] 2025-06-05 09:51:12,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:52:58] 2025-06-05 09:51:14,814 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 11:52:58] 2025-06-05 09:51:14,815 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6677441900/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 11:52:58] 2025-06-05 09:51:14,816 | INFO     | extracted standard info from prmon json
[2025-06-05 11:52:58] 2025-06-05 09:51:14,816 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 11:52:58] 2025-06-05 09:51:14,816 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 11:52:58] 2025-06-05 09:51:14,817 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 11:52:58] 2025-06-05 09:51:14,817 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 11:52:58] 2025-06-05 09:51:14,821 | INFO     | fitting pss+swap vs Time
[2025-06-05 11:52:58] 2025-06-05 09:51:14,822 | INFO     | sum of square deviations: 2632440055.0
[2025-06-05 11:52:58] 2025-06-05 09:51:14,823 | INFO     | sum of deviations: -54119997117.49999
[2025-06-05 11:52:58] 2025-06-05 09:51:14,824 | INFO     | mean x: 1749110835.5
[2025-06-05 11:52:58] 2025-06-05 09:51:14,824 | INFO     | mean y: 2411571.455882353
[2025-06-05 11:52:58] 2025-06-05 09:51:14,824 | INFO     | -- intersect: 35962156673.96991
[2025-06-05 11:52:58] 2025-06-05 09:51:14,824 | INFO     | intersect: 35962156673.96991
[2025-06-05 11:52:58] 2025-06-05 09:51:14,824 | INFO     | chi2: 2.049794101922886
[2025-06-05 11:52:58] 2025-06-05 09:51:14,825 | INFO     | sum of square deviations: 2443580700.0
[2025-06-05 11:52:58] 2025-06-05 09:51:14,826 | INFO     | sum of deviations: -52116418232.0
[2025-06-05 11:52:58] 2025-06-05 09:51:14,826 | INFO     | mean x: 1749110683.0
[2025-06-05 11:52:58] 2025-06-05 09:51:14,826 | INFO     | mean y: 2413189.6231155777
[2025-06-05 11:52:58] 2025-06-05 09:51:14,826 | INFO     | -- intersect: 37307251899.99891
[2025-06-05 11:52:58] 2025-06-05 09:51:14,827 | INFO     | intersect: 37307251899.99891
[2025-06-05 11:52:58] 2025-06-05 09:51:14,827 | INFO     | chi2: 2.0420214469218108
[2025-06-05 11:52:58] 2025-06-05 09:51:14,827 | INFO     | current chi2=2.0420214469218108 (change=0.3791919878091092 %)
[2025-06-05 11:52:58] 2025-06-05 09:51:14,827 | INFO     | right removable region: 198
[2025-06-05 11:52:58] 2025-06-05 09:51:14,828 | INFO     | sum of square deviations: 2443580700.0
[2025-06-05 11:52:58] 2025-06-05 09:51:14,829 | INFO     | sum of deviations: -85008605822.0
[2025-06-05 11:52:58] 2025-06-05 09:51:14,829 | INFO     | mean x: 1749110988.0
[2025-06-05 11:52:58] 2025-06-05 09:51:14,829 | INFO     | mean y: 2436241.1507537686
[2025-06-05 11:52:58] 2025-06-05 09:51:14,829 | INFO     | -- intersect: 60851454453.57196
[2025-06-05 11:52:58] 2025-06-05 09:51:14,829 | INFO     | intersect: 60851454453.57196
[2025-06-05 11:52:58] 2025-06-05 09:51:14,830 | INFO     | chi2: 0.4532428303549078
[2025-06-05 11:52:58] 2025-06-05 09:51:14,830 | INFO     | current chi2=0.4532428303549078 (change=77.88837279170008 %)
[2025-06-05 11:52:58] 2025-06-05 09:51:14,830 | INFO     | sum of square deviations: 2263977332.5
[2025-06-05 11:52:58] 2025-06-05 09:51:14,832 | INFO     | sum of deviations: -80478348864.49997
[2025-06-05 11:52:58] 2025-06-05 09:51:14,832 | INFO     | mean x: 1749111140.5
[2025-06-05 11:52:58] 2025-06-05 09:51:14,832 | INFO     | mean y: 2432380.3865979384
[2025-06-05 11:52:58] 2025-06-05 09:51:14,832 | INFO     | -- intersect: 62178662922.63405
[2025-06-05 11:52:58] 2025-06-05 09:51:14,832 | INFO     | intersect: 62178662922.63405
[2025-06-05 11:52:58] 2025-06-05 09:51:14,832 | INFO     | chi2: 0.4491223565477804
[2025-06-05 11:52:58] 2025-06-05 09:51:14,833 | INFO     | current chi2=0.4491223565477804 (change=0.9091095393391955 %)
[2025-06-05 11:52:58] 2025-06-05 09:51:14,833 | INFO     | left removable region: 20
[2025-06-05 11:52:58] 2025-06-05 09:51:14,833 | INFO     | sum of square deviations: 1748737904.5
[2025-06-05 11:52:58] 2025-06-05 09:51:14,834 | INFO     | sum of deviations: -61679534479.50002
[2025-06-05 11:52:58] 2025-06-05 09:51:14,834 | INFO     | mean x: 1749111262.5
[2025-06-05 11:52:58] 2025-06-05 09:51:14,834 | INFO     | mean y: 2419632.3314606743
[2025-06-05 11:52:58] 2025-06-05 09:51:14,835 | INFO     | -- intersect: 61695122779.11715
[2025-06-05 11:52:58] 2025-06-05 09:51:14,835 | INFO     | intersect: 61695122779.11715
[2025-06-05 11:52:58] 2025-06-05 09:51:14,835 | INFO     | chi2: 0.42365653461405045
[2025-06-05 11:52:58] 2025-06-05 09:51:14,835 | INFO     | -- intersect: 61695122779.11715
[2025-06-05 11:52:58] 2025-06-05 09:51:14,835 | INFO     | current memory leak: -35.27 B/s (using 178 data points, chi2=0.42)
[2025-06-05 11:52:58] 2025-06-05 09:51:14,836 | INFO     | ..............................
[2025-06-05 11:52:58] 2025-06-05 09:51:14,836 | INFO     | . Timing measurements:
[2025-06-05 11:52:58] 2025-06-05 09:51:14,836 | INFO     | . get job = 0 s
[2025-06-05 11:52:58] 2025-06-05 09:51:14,836 | INFO     | . initial setup = 1 s
[2025-06-05 11:52:58] 2025-06-05 09:51:14,837 | INFO     | . payload setup = 7 s
[2025-06-05 11:52:58] 2025-06-05 09:51:14,837 | INFO     | . stage-in = 0 s
[2025-06-05 11:52:58] 2025-06-05 09:51:14,837 | INFO     | . payload execution = 12424 s
[2025-06-05 11:52:58] 2025-06-05 09:51:14,837 | INFO     | . stage-out = 1 s
[2025-06-05 11:52:58] 2025-06-05 09:51:14,837 | INFO     | . log creation = 0 s
[2025-06-05 11:52:58] 2025-06-05 09:51:14,837 | INFO     | ..............................
[2025-06-05 11:52:58] 2025-06-05 09:51:14,948 | INFO     | 
[2025-06-05 11:52:58] 2025-06-05 09:51:14,949 | INFO     | job summary report
[2025-06-05 11:52:58] 2025-06-05 09:51:14,949 | INFO     | --------------------------------------------------
[2025-06-05 11:52:58] 2025-06-05 09:51:14,949 | INFO     | PanDA job id: 6677441900
[2025-06-05 11:52:58] 2025-06-05 09:51:14,949 | INFO     | task id: 45006595
[2025-06-05 11:52:58] 2025-06-05 09:51:14,949 | INFO     | errors: (none)
[2025-06-05 11:52:58] 2025-06-05 09:51:14,949 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 11:52:58] 2025-06-05 09:51:14,949 | INFO     | pilot state: finished 
[2025-06-05 11:52:58] 2025-06-05 09:51:14,949 | INFO     | transexitcode: 0
[2025-06-05 11:52:58] 2025-06-05 09:51:14,950 | INFO     | exeerrorcode: 0
[2025-06-05 11:52:58] 2025-06-05 09:51:14,950 | INFO     | exeerrordiag: 
[2025-06-05 11:52:58] 2025-06-05 09:51:14,950 | INFO     | exitcode: 0
[2025-06-05 11:52:58] 2025-06-05 09:51:14,950 | INFO     | exitmsg: OK
[2025-06-05 11:52:58] 2025-06-05 09:51:14,950 | INFO     | cpuconsumptiontime: 47138 s
[2025-06-05 11:52:58] 2025-06-05 09:51:14,950 | INFO     | nevents: 400
[2025-06-05 11:52:58] 2025-06-05 09:51:14,950 | INFO     | neventsw: 0
[2025-06-05 11:52:58] 2025-06-05 09:51:14,950 | INFO     | pid: 2313615
[2025-06-05 11:52:58] 2025-06-05 09:51:14,950 | INFO     | pgrp: 2313615
[2025-06-05 11:52:58] 2025-06-05 09:51:14,951 | INFO     | corecount: 4
[2025-06-05 11:52:58] 2025-06-05 09:51:14,951 | INFO     | event service: False
[2025-06-05 11:52:58] 2025-06-05 09:51:14,951 | INFO     | sizes: {0: 2397123, 1: 2397322, 5: 2397528, 12: 2397584, 12435: 2427092, 12436: 2427091, 12438: 2436294, 12444: 2436408}
[2025-06-05 11:52:58] 2025-06-05 09:51:14,951 | INFO     | --------------------------------------------------
[2025-06-05 11:52:58] 2025-06-05 09:51:14,951 | INFO     | 
[2025-06-05 11:52:58] 2025-06-05 09:51:14,951 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-06-05 11:52:58] 2025-06-05 09:51:14,973 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 11:52:58] 2025-06-05 09:51:14,974 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 11:52:58] 2025-06-05 09:51:14,974 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 11:52:58] 2025-06-05 09:51:14,974 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 11:52:58] 2025-06-05 09:51:14,974 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 11:52:58] 2025-06-05 09:51:14,974 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 11:52:58] 2025-06-05 09:51:14,974 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 11:52:58] 2025-06-05 09:51:14,974 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 11:52:58] 2025-06-05 09:51:14,975 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 11:52:58] 2025-06-05 09:51:14,975 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 11:52:58] 2025-06-05 09:51:14,975 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 11:52:58] 2025-06-05 09:51:14,975 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 11:52:58] 2025-06-05 09:51:14,975 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 11:52:58] 2025-06-05 09:51:14,975 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 11:52:58] 2025-06-05 09:51:14,975 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 11:52:58] 2025-06-05 09:51:14,975 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 11:52:58] 2025-06-05 09:51:14,976 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 11:52:58] 2025-06-05 09:51:14,976 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 11:52:58] 2025-06-05 09:51:14,976 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 11:52:58] 2025-06-05 09:51:14,976 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 11:52:58] 2025-06-05 09:51:14,976 | INFO     | job 6677441900 has completed (purged errors)
[2025-06-05 11:52:58] 2025-06-05 09:51:14,976 | INFO     | overall cleanup function is called
[2025-06-05 11:52:58] 2025-06-05 09:51:15,988 | INFO     | --- collectZombieJob: --- 10, [2313615]
[2025-06-05 11:52:58] 2025-06-05 09:51:15,988 | INFO     | zombie collector waiting for pid 2313615
[2025-06-05 11:52:58] 2025-06-05 09:51:15,988 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 11:52:58] 2025-06-05 09:51:15,988 | INFO     | collected zombie processes
[2025-06-05 11:52:58] 2025-06-05 09:51:15,988 | INFO     | will attempt to kill all subprocesses of pid=2313615
[2025-06-05 11:52:58] 2025-06-05 09:51:16,332 | INFO     | process IDs to be killed: [2313615] (in reverse order)
[2025-06-05 11:52:58] 2025-06-05 09:51:16,423 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 11:52:58] 2025-06-05 09:51:16,423 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 11:52:58] 2025-06-05 09:51:16,432 | INFO     | did not find any defunct processes belonging to 2313615
[2025-06-05 11:52:58] 2025-06-05 09:51:16,440 | INFO     | did not find any defunct processes belonging to 2313615
[2025-06-05 11:52:58] 2025-06-05 09:51:16,441 | INFO     | ready for new job
[2025-06-05 11:52:58] 2025-06-05 09:51:16,441 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 11:52:58] 2025-06-05 09:51:16,443 | INFO     | **************************************
[2025-06-05 11:52:58] 2025-06-05 09:51:16,443 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 11:52:58] 2025-06-05 09:51:16,443 | INFO     | **************************************
[2025-06-05 11:52:58] 2025-06-05 09:51:16,443 | INFO     | 
[2025-06-05 11:52:58] 2025-06-05 09:51:16,446 | INFO     | architecture information:
[2025-06-05 11:52:58] 2025-06-05 09:51:16,446 | INFO     | executing command: cat /etc/os-release
[2025-06-05 11:52:58] 2025-06-05 09:51:16,460 | INFO     | cat /etc/os-release:
[2025-06-05 11:52:58] NAME="CentOS Linux"
[2025-06-05 11:52:58] VERSION="7 (Core)"
[2025-06-05 11:52:58] ID="centos"
[2025-06-05 11:52:58] ID_LIKE="rhel fedora"
[2025-06-05 11:52:58] VERSION_ID="7"
[2025-06-05 11:52:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 11:52:58] ANSI_COLOR="0;31"
[2025-06-05 11:52:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 11:52:58] HOME_URL="https://www.centos.org/"
[2025-06-05 11:52:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 11:52:58] 
[2025-06-05 11:52:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 11:52:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 11:52:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 11:52:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 11:52:58] 
[2025-06-05 11:52:58] 2025-06-05 09:51:16,460 | INFO     | **************************************
[2025-06-05 11:52:58] 2025-06-05 09:51:16,963 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-06-05 11:52:58] 2025-06-05 09:51:16,981 | INFO     | sufficient remaining disk space (1658413121536 B)
[2025-06-05 11:52:58] 2025-06-05 09:51:16,982 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 11:52:58] 2025-06-05 09:51:16,982 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 11:52:58] 2025-06-05 09:51:16,982 | INFO     | update_server=False
[2025-06-05 11:52:58] 2025-06-05 09:51:16,982 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 11:52:58] 2025-06-05 09:51:16,983 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 11:52:58] 2025-06-05 09:51:16,983 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:52:58] 2025-06-05 09:51:16,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 11:52:58] 2025-06-05 09:51:16,984 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 11:52:58] 2025-06-05 09:51:16,984 | INFO     | aborting loop
[2025-06-05 11:52:58] 2025-06-05 09:51:16,984 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 11:52:58] 2025-06-05 09:51:16,985 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 11:52:58] 2025-06-05 09:51:17,042 | INFO     | all payload control threads have been joined
[2025-06-05 11:52:58] 2025-06-05 09:51:17,065 | INFO     | all job control threads have been joined
[2025-06-05 11:52:58] 2025-06-05 09:51:17,186 | INFO     | all data control threads have been joined
[2025-06-05 11:52:58] 2025-06-05 09:51:17,988 | INFO     | [job] retrieve thread has finished
[2025-06-05 11:52:58] 2025-06-05 09:51:17,989 | INFO     | [job] job monitor thread has finished
[2025-06-05 11:52:58] 2025-06-05 09:51:18,047 | INFO     | [payload] control thread has finished
[2025-06-05 11:52:58] 2025-06-05 09:51:18,069 | INFO     | [job] control thread has finished
[2025-06-05 11:52:58] 2025-06-05 09:51:18,192 | INFO     | [data] control thread has finished
[2025-06-05 11:52:58] 2025-06-05 09:51:18,557 | INFO     | [payload] failed_post thread has finished
[2025-06-05 11:52:58] 2025-06-05 09:51:18,754 | INFO     | [job] validate thread has finished
[2025-06-05 11:52:58] 2025-06-05 09:51:18,898 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 11:52:58] 2025-06-05 09:51:18,930 | INFO     | [payload] validate_post thread has finished
[2025-06-05 11:52:58] 2025-06-05 09:51:18,953 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 11:52:58] 2025-06-05 09:51:18,956 | INFO     | [data] copytool_in thread has finished
[2025-06-05 11:52:58] 2025-06-05 09:51:18,990 | INFO     | [data] copytool_out thread has finished
[2025-06-05 11:52:58] 2025-06-05 09:51:19,131 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 11:52:58] 2025-06-05 09:51:19,193 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 11:52:58] 2025-06-05 09:51:19,595 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 11:52:58] 2025-06-05 09:51:19,958 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:52:58] 2025-06-05 09:51:20,963 | INFO     | [job] queue monitor thread has finished
[2025-06-05 11:52:58] 2025-06-05 09:51:23,601 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 11:52:58] 2025-06-05 09:51:24,301 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22608269231936)>', '<ExcThread(monitor, started 22607829124864)>']
[2025-06-05 11:52:58] 2025-06-05 09:51:25,023 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 11:52:58] 2025-06-05 09:51:25,024 | INFO     | [monitor] control thread has ended
[2025-06-05 11:52:58] 2025-06-05 09:51:29,309 | INFO     | all workflow threads have been joined
[2025-06-05 11:52:58] 2025-06-05 09:51:29,309 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 11:52:58] 2025-06-05 09:51:29,309 | INFO     | traces error code: 0
[2025-06-05 11:52:58] 2025-06-05 09:51:29,310 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 11:52:58] 2025-06-05 09:51:29,449 [wrapper] ==== pilot stdout END ====
[2025-06-05 11:52:58] 2025-06-05 09:51:29,452 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 11:52:58] 2025-06-05 09:51:29,454 [wrapper] pilotpid: 2306862
[2025-06-05 11:52:58] 2025-06-05 09:51:29,457 [wrapper] Pilot exit status: 0
[2025-06-05 11:52:58] 2025-06-05 09:51:29,468 [wrapper] pandaids: 6677441900
[2025-06-05 11:52:58] 2025-06-05 09:51:29,520 [wrapper] cleanup supervisor_pilot 2504620 2306863
[2025-06-05 11:52:58] 2025-06-05 09:51:29,523 [wrapper] Test setup, not cleaning
[2025-06-05 11:52:58] 2025-06-05 09:51:29,526 [wrapper] apfmon messages muted
[2025-06-05 11:52:58] 2025-06-05 09:51:29,529 [wrapper] ==== wrapper stdout END ====
[2025-06-05 11:52:58] 2025-06-05 09:51:29,532 [wrapper] ==== wrapper stderr END ====
[2025-06-05 11:52:58]  *** Error codes and diagnostics ***
[2025-06-05 11:52:58]     "exeErrorCode": 0,
[2025-06-05 11:52:58]     "exeErrorDiag": "",
[2025-06-05 11:52:58]     "pilotErrorCode": 0,
[2025-06-05 11:52:58]     "pilotErrorDiag": "",
[2025-06-05 11:52:58]  *** Listing of results directory ***
[2025-06-05 11:52:58] total 393712
[2025-06-05 11:52:58] -rw-r--r-- 1 boinc boinc    495897 Jun  3 03:09 pilot3.tar.gz
[2025-06-05 11:52:58] -rw-r--r-- 1 boinc boinc      5111 Jun  3 03:10 queuedata.json
[2025-06-05 11:52:58] -rwx------ 1 boinc boinc     37140 Jun  3 03:12 runpilot2-wrapper.sh
[2025-06-05 11:52:58] -rw-r--r-- 1 boinc boinc       100 Jun  5 08:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 11:52:58] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 08:23 run_atlas
[2025-06-05 11:52:58] -rw-r--r-- 1 boinc boinc       105 Jun  5 08:23 job.xml
[2025-06-05 11:52:58] -rw-r--r-- 1 boinc boinc      6422 Jun  5 08:23 init_data.xml
[2025-06-05 11:52:58] -rw-r--r-- 2 boinc boinc 212554691 Jun  5 08:23 EVNT.45006593._000644.pool.root.1
[2025-06-05 11:52:58] -rw-r--r-- 2 boinc boinc     15093 Jun  5 08:23 start_atlas.sh
[2025-06-05 11:52:58] drwxrwx--x 2 boinc boinc      4096 Jun  5 08:23 shared
[2025-06-05 11:52:58] -rw-r--r-- 2 boinc boinc    508882 Jun  5 08:23 input.tar.gz
[2025-06-05 11:52:58] -rw-r--r-- 1 boinc boinc         0 Jun  5 08:23 boinc_lockfile
[2025-06-05 11:52:58] -rw-r--r-- 1 boinc boinc      2520 Jun  5 08:23 pandaJob.out
[2025-06-05 11:52:58] -rw------- 1 boinc boinc    986926 Jun  5 08:23 agis_schedconf.cvmfs.json
[2025-06-05 11:52:58] drwx------ 4 boinc boinc      4096 Jun  5 08:23 pilot3
[2025-06-05 11:52:58] -rw------- 1 boinc boinc 183822773 Jun  5 11:50 HITS.45006595._016079.pool.root.1
[2025-06-05 11:52:58] -rw-r--r-- 1 boinc boinc       528 Jun  5 11:50 boinc_task_state.xml
[2025-06-05 11:52:58] -rw------- 1 boinc boinc        95 Jun  5 11:50 pilot_heartbeat.json
[2025-06-05 11:52:58] -rw------- 1 boinc boinc      1038 Jun  5 11:51 memory_monitor_summary.json
[2025-06-05 11:52:58] -rw------- 1 boinc boinc   1598969 Jun  5 11:51 agis_ddmendpoints.agis.ALL.json
[2025-06-05 11:52:58] -rw------- 1 boinc boinc    304140 Jun  5 11:51 log.45006595._016079.job.log.tgz.1
[2025-06-05 11:52:58] -rw------- 1 boinc boinc      7743 Jun  5 11:51 heartbeat.json
[2025-06-05 11:52:58] -rw------- 1 boinc boinc      4487 Jun  5 11:51 pilotlog.txt
[2025-06-05 11:52:58] -rw------- 1 boinc boinc   1167889 Jun  5 11:51 log.45006595._016079.job.log.1
[2025-06-05 11:52:58] -rw------- 1 boinc boinc       357 Jun  5 11:51 output.list
[2025-06-05 11:52:58] -rw-r--r-- 1 boinc boinc       620 Jun  5 11:51 runtime_log
[2025-06-05 11:52:58] -rw------- 1 boinc boinc   1495040 Jun  5 11:51 result.tar.gz
[2025-06-05 11:52:58] -rw-r--r-- 1 boinc boinc      9026 Jun  5 11:51 runtime_log.err
[2025-06-05 11:52:58] -rw------- 1 boinc boinc       665 Jun  5 11:51 DgUMDmpNVg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXNhKDmJbAY4m.diag
[2025-06-05 11:52:58] -rw-r--r-- 1 boinc boinc        26 Jun  5 11:52 wrapper_checkpoint.txt
[2025-06-05 11:52:58] -rw-r--r-- 1 boinc boinc      8192 Jun  5 11:52 boinc_mmap_file
[2025-06-05 11:52:58] -rw-r--r-- 1 boinc boinc     20967 Jun  5 11:52 stderr.txt
[2025-06-05 11:52:58] HITS file was successfully produced:
[2025-06-05 11:52:58] -rw------- 1 boinc boinc 183822773 Jun  5 11:50 shared/HITS.pool.root.1
[2025-06-05 11:52:58]  *** Contents of shared directory: ***
[2025-06-05 11:52:58] total 389076
[2025-06-05 11:52:58] -rw-r--r-- 2 boinc boinc 212554691 Jun  5 08:23 ATLAS.root_0
[2025-06-05 11:52:58] -rw-r--r-- 2 boinc boinc     15093 Jun  5 08:23 start_atlas.sh
[2025-06-05 11:52:58] -rw-r--r-- 2 boinc boinc    508882 Jun  5 08:23 input.tar.gz
[2025-06-05 11:52:58] -rw------- 1 boinc boinc 183822773 Jun  5 11:50 HITS.pool.root.1
[2025-06-05 11:52:58] -rw------- 1 boinc boinc   1495040 Jun  5 11:51 result.tar.gz
11:53:00 (2303291): run_atlas exited; CPU time 47560.939404
11:53:00 (2303291): called boinc_finish(0)

</stderr_txt>
]]>

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