Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:42:21 (3859755): wrapper (7.7.26015): starting
21:42:21 (3859755): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 21:42:21] Arguments: --nthreads 8
[2025-06-02 21:42:21] Threads: 8
[2025-06-02 21:42:21] Checking for CVMFS
[2025-06-02 21:42:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 21:42:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 21:42:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 21:42:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 21:42:22] 2.11.3.0 3635679 220294 181744 146730 2 343 38095536 45568000 10988 130560 0 1153849131 99.720 1151229375 20880 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-06-02 21:42:22] CVMFS is ok
[2025-06-02 21:42:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 21:42:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 21:42:22] Further information can be found at the LHC@home message board.
[2025-06-02 21:42:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 21:42:22] Checking for apptainer binary...
[2025-06-02 21:42:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 21:42:22] Running /usr/bin/apptainer --version
[2025-06-02 21:42:22] apptainer version 1.3.3-1.el9
[2025-06-02 21:42:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 21:42:22] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0008.triumf.lcg
[2025-06-02 21:42:22] apptainer works
[2025-06-02 21:42:22] Set ATHENA_PROC_NUMBER=8
[2025-06-02 21:42:22] Set ATHENA_CORE_NUMBER=8
[2025-06-02 21:42:22] Starting ATLAS job with PandaID=6677454404
[2025-06-02 21:42:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 21:46:07]  *** The last 200 lines of the pilot log: ***
[2025-06-02 21:46:07] 2025-06-03 04:45:52,262 | INFO     | extracted standard info from prmon json
[2025-06-02 21:46:07] 2025-06-03 04:45:52,262 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 21:46:07] 2025-06-03 04:45:52,262 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 21:46:07] 2025-06-03 04:45:52,263 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 21:46:07] 2025-06-03 04:45:52,263 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 21:46:07] 2025-06-03 04:45:52,263 | WARNING  | found no stored workdir sizes
[2025-06-02 21:46:07] 2025-06-03 04:45:52,263 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 21:46:07] 2025-06-03 04:45:52,263 | WARNING  | wrong length of table data, x=[1748925797.0], y=[24562.0] (must be same and length>=4)
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | ..............................
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . Timing measurements:
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . get job = 0 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . initial setup = 4 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . payload setup = 10 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . stage-in = 0 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . payload execution = 30 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . stage-out = 0 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . log creation = 0 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | ..............................
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 21:46:07] 2025-06-03 04:45:52,265 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677454404/pilotlog.txt
[2025-06-02 21:46:07] 2025-06-03 04:45:52,277 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-02 21:46:07] - Log from pilotlog.txt -
[2025-06-02 21:46:07] 2025-06-03 04:45:52,262 | INFO     | extracted standard info from prmon json
[2025-06-02 21:46:07] 2025-06-03 04:45:52,262 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 21:46:07] 2025-06-03 04:45:52,262 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 21:46:07] 2025-06-03 04:45:52,263 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 21:46:07] 2025-06-03 04:45:52,263 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 21:46:07] 2025-06-03 04:45:52,263 | WARNING  | found no stored workdir sizes
[2025-06-02 21:46:07] 2025-06-03 04:45:52,263 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 21:46:07] 2025-06-03 04:45:52,263 | WARNING  | wrong length of table data, x=[1748925797.0], y=[24562.0] (must be same and length>=4)
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | ..............................
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . Timing measurements:
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . get job = 0 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . initial setup = 4 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . payload setup = 10 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . stage-in = 0 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . payload execution = 30 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . stage-out = 0 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . log creation = 0 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | ..............................
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 21:46:07] 2025-06-03 04:45:52,265 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677454404/pilotlog.txt
[2025-06-02 21:46:07] 2025-06-03 04:45:52,278 | WARNING  | 
[2025-06-02 21:46:07] [begin log extracts]
[2025-06-02 21:46:07] - Log from pilotlog.txt -
[2025-06-02 21:46:07] 2025-06-03 04:45:52,262 | INFO     | extracted standard info from prmon json
[2025-06-02 21:46:07] 2025-06-03 04:45:52,262 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 21:46:07] 2025-06-03 04:45:52,262 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 21:46:07] 2025-06-03 04:45:52,263 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 21:46:07] 2025-06-03 04:45:52,263 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 21:46:07] 2025-06-03 04:45:52,263 | WARNING  | found no stored workdir sizes
[2025-06-02 21:46:07] 2025-06-03 04:45:52,263 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 21:46:07] 2025-06-03 04:45:52,263 | WARNING  | wrong length of table data, x=[1748925797.0], y=[24562.0] (must be same and length>=4)
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | ..............................
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . Timing measurements:
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . get job = 0 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . initial setup = 4 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . payload setup = 10 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . stage-in = 0 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . payload execution = 30 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . stage-out = 0 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | . log creation = 0 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | ..............................
[2025-06-02 21:46:07] 2025-06-03 04:45:52,264 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 21:46:07] 2025-06-03 04:45:52,265 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677454404/pilotlog.txt
[2025-06-02 21:46:07] [end log extracts]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,278 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-02 21:46:07] 2025-06-03 04:45:52,278 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-02 21:46:07] 2025-06-03 04:45:52,426 | INFO     | 
[2025-06-02 21:46:07] 2025-06-03 04:45:52,426 | INFO     | job summary report
[2025-06-02 21:46:07] 2025-06-03 04:45:52,427 | INFO     | --------------------------------------------------
[2025-06-02 21:46:07] 2025-06-03 04:45:52,427 | INFO     | PanDA job id: 6677454404
[2025-06-02 21:46:07] 2025-06-03 04:45:52,427 | INFO     | task id: 45006595
[2025-06-02 21:46:07] 2025-06-03 04:45:52,427 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-02 21:43:36,432 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-02 21:46:07] 2025-06-03 04:45:52,427 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 21:46:07] 2025-06-03 04:45:52,427 | INFO     | pilot state: failed 
[2025-06-02 21:46:07] 2025-06-03 04:45:52,427 | INFO     | transexitcode: 65
[2025-06-02 21:46:07] 2025-06-03 04:45:52,427 | INFO     | exeerrorcode: 65
[2025-06-02 21:46:07] 2025-06-03 04:45:52,427 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 21:46:07] 2025-06-03 04:45:52,427 | INFO     | exitcode: 65
[2025-06-02 21:46:07] 2025-06-03 04:45:52,427 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 21:46:07] 2025-06-03 04:45:52,427 | INFO     | cpuconsumptiontime: 17 s
[2025-06-02 21:46:07] 2025-06-03 04:45:52,427 | INFO     | nevents: 0
[2025-06-02 21:46:07] 2025-06-03 04:45:52,428 | INFO     | neventsw: 0
[2025-06-02 21:46:07] 2025-06-03 04:45:52,428 | INFO     | pid: 3869640
[2025-06-02 21:46:07] 2025-06-03 04:45:52,428 | INFO     | pgrp: 3869640
[2025-06-02 21:46:07] 2025-06-03 04:45:52,428 | INFO     | corecount: 8
[2025-06-02 21:46:07] 2025-06-03 04:45:52,428 | INFO     | event service: False
[2025-06-02 21:46:07] 2025-06-03 04:45:52,428 | INFO     | sizes: {0: 2405179, 9: 2405385, 11: 2405413, 44: 2428605, 45: 2432844, 49: 2432844, 172: 2433114}
[2025-06-02 21:46:07] 2025-06-03 04:45:52,428 | INFO     | --------------------------------------------------
[2025-06-02 21:46:07] 2025-06-03 04:45:52,428 | INFO     | 
[2025-06-02 21:46:07] 2025-06-03 04:45:52,428 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-02 21:46:07] 2025-06-03 04:45:52,602 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,602 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,602 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,602 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,602 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,602 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,602 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,602 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,602 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,603 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,603 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,603 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,603 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,603 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,603 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,603 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,603 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,603 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 21:46:07] 2025-06-03 04:45:52,603 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,603 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 21:46:07] 2025-06-03 04:45:52,603 | INFO     | job 6677454404 has completed (purged errors)
[2025-06-02 21:46:07] 2025-06-03 04:45:52,604 | INFO     | overall cleanup function is called
[2025-06-02 21:46:07] 2025-06-03 04:45:53,610 | INFO     | --- collectZombieJob: --- 10, [3869640]
[2025-06-02 21:46:07] 2025-06-03 04:45:53,610 | INFO     | zombie collector waiting for pid 3869640
[2025-06-02 21:46:07] 2025-06-03 04:45:53,611 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 21:46:07] 2025-06-03 04:45:53,611 | INFO     | collected zombie processes
[2025-06-02 21:46:07] 2025-06-03 04:45:53,611 | INFO     | will attempt to kill all subprocesses of pid=3869640
[2025-06-02 21:46:07] 2025-06-03 04:45:53,924 | INFO     | process IDs to be killed: [3869640] (in reverse order)
[2025-06-02 21:46:07] 2025-06-03 04:45:54,000 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 21:46:07] 2025-06-03 04:45:54,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 21:46:07] 2025-06-03 04:45:54,026 | INFO     | did not find any defunct processes belonging to 3869640
[2025-06-02 21:46:07] 2025-06-03 04:45:54,044 | INFO     | did not find any defunct processes belonging to 3869640
[2025-06-02 21:46:07] 2025-06-03 04:45:54,044 | INFO     | ready for new job
[2025-06-02 21:46:07] 2025-06-03 04:45:54,044 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 21:46:07] 2025-06-03 04:45:54,046 | INFO     | **************************************
[2025-06-02 21:46:07] 2025-06-03 04:45:54,046 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 21:46:07] 2025-06-03 04:45:54,046 | INFO     | **************************************
[2025-06-02 21:46:07] 2025-06-03 04:45:54,046 | INFO     | 
[2025-06-02 21:46:07] 2025-06-03 04:45:54,061 | INFO     | architecture information:
[2025-06-02 21:46:07] 2025-06-03 04:45:54,061 | INFO     | executing command: cat /etc/os-release
[2025-06-02 21:46:07] 2025-06-03 04:45:54,084 | INFO     | cat /etc/os-release:
[2025-06-02 21:46:07] NAME="CentOS Linux"
[2025-06-02 21:46:07] VERSION="7 (Core)"
[2025-06-02 21:46:07] ID="centos"
[2025-06-02 21:46:07] ID_LIKE="rhel fedora"
[2025-06-02 21:46:07] VERSION_ID="7"
[2025-06-02 21:46:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 21:46:07] ANSI_COLOR="0;31"
[2025-06-02 21:46:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 21:46:07] HOME_URL="https://www.centos.org/"
[2025-06-02 21:46:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 21:46:07] 
[2025-06-02 21:46:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 21:46:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 21:46:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 21:46:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 21:46:07] 
[2025-06-02 21:46:07] 2025-06-03 04:45:54,085 | INFO     | **************************************
[2025-06-02 21:46:07] 2025-06-03 04:45:54,588 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-02 21:46:07] 2025-06-03 04:45:54,659 | INFO     | sufficient remaining disk space (1207697408000 B)
[2025-06-02 21:46:07] 2025-06-03 04:45:54,660 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 21:46:07] 2025-06-03 04:45:54,660 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 21:46:07] 2025-06-03 04:45:54,660 | INFO     | update_server=False
[2025-06-02 21:46:07] 2025-06-03 04:45:54,660 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 21:46:07] 2025-06-03 04:45:54,661 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 21:46:07] 2025-06-03 04:45:55,015 | INFO     | all job control threads have been joined
[2025-06-02 21:46:07] 2025-06-03 04:45:55,331 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 21:46:07] 2025-06-03 04:45:55,332 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 21:46:07] 2025-06-03 04:45:55,332 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 21:46:07] 2025-06-03 04:45:55,492 | INFO     | all payload control threads have been joined
[2025-06-02 21:46:07] 2025-06-03 04:45:55,555 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 21:46:07] 2025-06-03 04:45:55,555 | INFO     | aborting loop
[2025-06-02 21:46:07] 2025-06-03 04:45:55,603 | INFO     | all data control threads have been joined
[2025-06-02 21:46:07] 2025-06-03 04:45:55,666 | INFO     | [job] retrieve thread has finished
[2025-06-02 21:46:07] 2025-06-03 04:45:56,010 | INFO     | [payload] failed_post thread has finished
[2025-06-02 21:46:07] 2025-06-03 04:45:56,021 | INFO     | [job] control thread has finished
[2025-06-02 21:46:07] 2025-06-03 04:45:56,208 | INFO     | [data] copytool_in thread has finished
[2025-06-02 21:46:07] 2025-06-03 04:45:56,480 | INFO     | [job] validate thread has finished
[2025-06-02 21:46:07] 2025-06-03 04:45:56,498 | INFO     | [payload] control thread has finished
[2025-06-02 21:46:07] 2025-06-03 04:45:56,561 | INFO     | [job] job monitor thread has finished
[2025-06-02 21:46:07] 2025-06-03 04:45:56,609 | INFO     | [data] control thread has finished
[2025-06-02 21:46:07] 2025-06-03 04:45:56,681 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 21:46:07] 2025-06-03 04:45:56,682 | INFO     | [data] copytool_out thread has finished
[2025-06-02 21:46:07] 2025-06-03 04:45:56,761 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 21:46:07] 2025-06-03 04:45:56,907 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 21:46:07] 2025-06-03 04:45:56,942 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 21:46:07] 2025-06-03 04:45:56,963 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 21:46:07] 2025-06-03 04:45:57,086 | INFO     | [payload] validate_post thread has finished
[2025-06-02 21:46:07] 2025-06-03 04:45:57,440 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 21:46:07] 2025-06-03 04:45:58,445 | INFO     | [job] queue monitor thread has finished
[2025-06-02 21:46:07] 2025-06-03 04:46:00,975 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 21:46:07] 2025-06-03 04:46:02,370 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139824047867712)>', '<ExcThread(monitor, started 139822828074752)>']
[2025-06-02 21:46:07] 2025-06-03 04:46:02,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 21:46:07] 2025-06-03 04:46:02,372 | INFO     | [monitor] control thread has ended
[2025-06-02 21:46:07] 2025-06-03 04:46:07,396 | INFO     | all workflow threads have been joined
[2025-06-02 21:46:07] 2025-06-03 04:46:07,396 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 21:46:07] 2025-06-03 04:46:07,397 | INFO     | traces error code: 0
[2025-06-02 21:46:07] 2025-06-03 04:46:07,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 21:46:07] 2025-06-03 04:46:07,767 [wrapper] ==== pilot stdout END ====
[2025-06-02 21:46:07] 2025-06-03 04:46:07,770 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 21:46:07] 2025-06-03 04:46:07,773 [wrapper] pilotpid: 3863324
[2025-06-02 21:46:07] 2025-06-03 04:46:07,775 [wrapper] Pilot exit status: 0
[2025-06-02 21:46:07] 2025-06-03 04:46:07,791 [wrapper] pandaids: 6677454404
[2025-06-02 21:46:07] 2025-06-03 04:46:07,827 [wrapper] cleanup supervisor_pilot 3863330 3863325
[2025-06-02 21:46:07] 2025-06-03 04:46:07,848 [wrapper] Test setup, not cleaning
[2025-06-02 21:46:07] 2025-06-03 04:46:07,855 [wrapper] apfmon messages muted
[2025-06-02 21:46:07] 2025-06-03 04:46:07,861 [wrapper] ==== wrapper stdout END ====
[2025-06-02 21:46:07] 2025-06-03 04:46:07,870 [wrapper] ==== wrapper stderr END ====
[2025-06-02 21:46:07]  *** Error codes and diagnostics ***
[2025-06-02 21:46:07]     "exeErrorCode": 65,
[2025-06-02 21:46:07]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 21:46:07]     "pilotErrorCode": 1305,
[2025-06-02 21:46:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 21:46:07]  *** Listing of results directory ***
[2025-06-02 21:46:07] total 213660
[2025-06-02 21:46:07] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:50 pilot3.tar.gz
[2025-06-02 21:46:07] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:55 queuedata.json
[2025-06-02 21:46:07] -rwx------. 1 boinc boinc     37140 Jun  2 19:58 runpilot2-wrapper.sh
[2025-06-02 21:46:07] -rw-r--r--. 1 boinc boinc       100 Jun  2 21:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 21:46:07] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 21:42 run_atlas
[2025-06-02 21:46:07] -rw-r--r--. 1 boinc boinc       105 Jun  2 21:42 job.xml
[2025-06-02 21:46:07] -rw-r--r--. 2 boinc boinc 214753673 Jun  2 21:42 EVNT.45006593._000715.pool.root.1
[2025-06-02 21:46:07] -rw-r--r--. 1 boinc boinc      6452 Jun  2 21:42 init_data.xml
[2025-06-02 21:46:07] -rw-r--r--. 2 boinc boinc     15093 Jun  2 21:42 start_atlas.sh
[2025-06-02 21:46:07] drwxrwx--x. 2 boinc boinc      4096 Jun  2 21:42 shared
[2025-06-02 21:46:07] -rw-r--r--. 2 boinc boinc    508881 Jun  2 21:42 input.tar.gz
[2025-06-02 21:46:07] -rw-r--r--. 1 boinc boinc         0 Jun  2 21:42 boinc_lockfile
[2025-06-02 21:46:07] -rw-r--r--. 1 boinc boinc      2524 Jun  2 21:42 pandaJob.out
[2025-06-02 21:46:07] -rw-------. 1 boinc boinc    988081 Jun  2 21:42 agis_schedconf.cvmfs.json
[2025-06-02 21:46:07] -rw-------. 1 boinc boinc   1603667 Jun  2 21:42 agis_ddmendpoints.agis.ALL.json
[2025-06-02 21:46:07] drwx------. 4 boinc boinc      4096 Jun  2 21:42 pilot3
[2025-06-02 21:46:07] -rw-r--r--. 1 boinc boinc       522 Jun  2 21:43 boinc_task_state.xml
[2025-06-02 21:46:07] -rw-------. 1 boinc boinc       960 Jun  2 21:43 memory_monitor_summary.json
[2025-06-02 21:46:07] -rw-------. 1 boinc boinc     20545 Jun  2 21:43 log.45006595._017867.job.log.tgz.1
[2025-06-02 21:46:07] -rw-------. 1 boinc boinc        95 Jun  2 21:45 pilot_heartbeat.json
[2025-06-02 21:46:07] -rw-------. 1 boinc boinc      8310 Jun  2 21:45 heartbeat.json
[2025-06-02 21:46:07] -rw-r--r--. 1 boinc boinc        22 Jun  2 21:46 wrapper_checkpoint.txt
[2025-06-02 21:46:07] -rw-------. 1 boinc boinc      4352 Jun  2 21:46 pilotlog.txt
[2025-06-02 21:46:07] -rw-r--r--. 1 boinc boinc      8192 Jun  2 21:46 boinc_mmap_file
[2025-06-02 21:46:07] -rw-------. 1 boinc boinc     74331 Jun  2 21:46 log.45006595._017867.job.log.1
[2025-06-02 21:46:07] -rw-------. 1 boinc boinc       188 Jun  2 21:46 output.list
[2025-06-02 21:46:07] -rw-r--r--. 1 boinc boinc       620 Jun  2 21:46 runtime_log
[2025-06-02 21:46:07] -rw-------. 1 boinc boinc    112640 Jun  2 21:46 result.tar.gz
[2025-06-02 21:46:07] -rw-r--r--. 1 boinc boinc      8647 Jun  2 21:46 runtime_log.err
[2025-06-02 21:46:07] -rw-------. 1 boinc boinc       644 Jun  2 21:46 oqoMDmA2Wg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5ghKDmao3Rhn.diag
[2025-06-02 21:46:07] -rw-r--r--. 1 boinc boinc     21607 Jun  2 21:46 stderr.txt
[2025-06-02 21:46:07] No HITS result produced
[2025-06-02 21:46:07]  *** Contents of shared directory: ***
[2025-06-02 21:46:07] total 210356
[2025-06-02 21:46:07] -rw-r--r--. 2 boinc boinc 214753673 Jun  2 21:42 ATLAS.root_0
[2025-06-02 21:46:07] -rw-r--r--. 2 boinc boinc     15093 Jun  2 21:42 start_atlas.sh
[2025-06-02 21:46:07] -rw-r--r--. 2 boinc boinc    508881 Jun  2 21:42 input.tar.gz
[2025-06-02 21:46:07] -rw-------. 1 boinc boinc    112640 Jun  2 21:46 result.tar.gz
21:46:09 (3859755): run_atlas exited; CPU time 23.479079
21:46:09 (3859755): called boinc_finish(0)

</stderr_txt>
]]>

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