Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:37:56 (5940): wrapper (7.7.26015): starting
15:37:56 (5940): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 15:37:56] Arguments: --nthreads 8
[2025-06-03 15:37:56] Threads: 8
[2025-06-03 15:37:56] Checking for CVMFS
[2025-06-03 15:37:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:37:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:37:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:37:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:37:58] 2.11.2.0 2201 31825 89948 146743 3 59 19443204 25165825 4646 130560 0 15893826 99.800 17997906 2154 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 15:37:58] CVMFS is ok
[2025-06-03 15:37:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:37:58] Checking for apptainer binary...
[2025-06-03 15:37:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:37:58] Running /usr/bin/apptainer --version
[2025-06-03 15:37:58] apptainer version 1.3.2-1.el7
[2025-06-03 15:37:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:38:05] cg-vwn381.simple-grid.lan
[2025-06-03 15:38:05] apptainer works
[2025-06-03 15:38:05] Set ATHENA_PROC_NUMBER=8
[2025-06-03 15:38:05] Set ATHENA_CORE_NUMBER=8
[2025-06-03 15:38:05] Starting ATLAS job with PandaID=6677441339
[2025-06-03 15:38:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/23 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 22:13:28]  *** The last 200 lines of the pilot log: ***
[2025-06-03 22:13:28] 2025-06-03 17:32:45,540 | INFO     | using path: /var/lib/boinc/slots/23/PanDA_Pilot-6677441339/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 22:13:28] 2025-06-03 17:32:45,541 | INFO     | extracted standard info from prmon json
[2025-06-03 22:13:28] 2025-06-03 17:32:45,541 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 22:13:28] 2025-06-03 17:32:45,541 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 22:13:28] 2025-06-03 17:32:45,541 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 22:13:28] 2025-06-03 17:32:45,541 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 22:13:28] 2025-06-03 17:32:45,546 | INFO     | fitting pss+swap vs Time
[2025-06-03 22:13:28] 2025-06-03 17:32:45,547 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 22:13:28] 2025-06-03 17:32:45,549 | INFO     | sum of deviations: 44474161850.5
[2025-06-03 22:13:28] 2025-06-03 17:32:45,549 | INFO     | mean x: 1748965203.5
[2025-06-03 22:13:28] 2025-06-03 17:32:45,549 | INFO     | mean y: 2484680.9954128442
[2025-06-03 22:13:28] 2025-06-03 17:32:45,549 | INFO     | -- intersect: -24210603017.531612
[2025-06-03 22:13:28] 2025-06-03 17:32:45,549 | INFO     | intersect: -24210603017.531612
[2025-06-03 22:13:28] 2025-06-03 17:32:45,550 | INFO     | chi2: 8.536775666115217
[2025-06-03 22:13:28] 2025-06-03 17:32:45,550 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 22:13:28] 2025-06-03 17:32:45,552 | INFO     | sum of deviations: 58986394148.00003
[2025-06-03 22:13:28] 2025-06-03 17:32:45,552 | INFO     | mean x: 1748965051.0
[2025-06-03 22:13:28] 2025-06-03 17:32:45,552 | INFO     | mean y: 2494737.6338028167
[2025-06-03 22:13:28] 2025-06-03 17:32:45,552 | INFO     | -- intersect: -34426577346.63706
[2025-06-03 22:13:28] 2025-06-03 17:32:45,552 | INFO     | intersect: -34426577346.63706
[2025-06-03 22:13:28] 2025-06-03 17:32:45,553 | INFO     | chi2: 7.8485538873912555
[2025-06-03 22:13:28] 2025-06-03 17:32:45,553 | INFO     | current chi2=7.8485538873912555 (change=8.061846833526394 %)
[2025-06-03 22:13:28] 2025-06-03 17:32:45,553 | INFO     | right removable region: 212
[2025-06-03 22:13:28] 2025-06-03 17:32:45,553 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 22:13:28] 2025-06-03 17:32:45,555 | INFO     | sum of deviations: -33434176920.99997
[2025-06-03 22:13:28] 2025-06-03 17:32:45,555 | INFO     | mean x: 1748965356.0
[2025-06-03 22:13:28] 2025-06-03 17:32:45,556 | INFO     | mean y: 2539647.568075117
[2025-06-03 22:13:28] 2025-06-03 17:32:45,556 | INFO     | -- intersect: 19517343097.725155
[2025-06-03 22:13:28] 2025-06-03 17:32:45,556 | INFO     | intersect: 19517343097.725155
[2025-06-03 22:13:28] 2025-06-03 17:32:45,556 | INFO     | chi2: 3.3278849881918493
[2025-06-03 22:13:28] 2025-06-03 17:32:45,556 | INFO     | current chi2=3.3278849881918493 (change=61.01707344376953 %)
[2025-06-03 22:13:28] 2025-06-03 17:32:45,557 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 22:13:28] 2025-06-03 17:32:45,559 | INFO     | sum of deviations: -83265041358.00002
[2025-06-03 22:13:28] 2025-06-03 17:32:45,559 | INFO     | mean x: 1748965508.5
[2025-06-03 22:13:28] 2025-06-03 17:32:45,559 | INFO     | mean y: 2576366.096153846
[2025-06-03 22:13:28] 2025-06-03 17:32:45,559 | INFO     | -- intersect: 52192367212.94237
[2025-06-03 22:13:28] 2025-06-03 17:32:45,559 | INFO     | intersect: 52192367212.94237
[2025-06-03 22:13:28] 2025-06-03 17:32:45,560 | INFO     | chi2: 1.0801691612547404
[2025-06-03 22:13:28] 2025-06-03 17:32:45,560 | INFO     | current chi2=1.0801691612547404 (change=67.54187223754893 %)
[2025-06-03 22:13:28] 2025-06-03 17:32:45,560 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 22:13:28] 2025-06-03 17:32:45,562 | INFO     | sum of deviations: -89244016138.0
[2025-06-03 22:13:28] 2025-06-03 17:32:45,562 | INFO     | mean x: 1748965661.0
[2025-06-03 22:13:28] 2025-06-03 17:32:45,562 | INFO     | mean y: 2580950.3251231527
[2025-06-03 22:13:28] 2025-06-03 17:32:45,562 | INFO     | -- intersect: 60175958600.611855
[2025-06-03 22:13:28] 2025-06-03 17:32:45,562 | INFO     | intersect: 60175958600.611855
[2025-06-03 22:13:28] 2025-06-03 17:32:45,563 | INFO     | chi2: 0.9696692913587063
[2025-06-03 22:13:28] 2025-06-03 17:32:45,563 | INFO     | current chi2=0.9696692913587063 (change=10.229867122634369 %)
[2025-06-03 22:13:28] 2025-06-03 17:32:45,563 | INFO     | left removable region: 30
[2025-06-03 22:13:28] 2025-06-03 17:32:45,563 | INFO     | sum of square deviations: 1869302025.5
[2025-06-03 22:13:28] 2025-06-03 17:32:45,565 | INFO     | sum of deviations: -59172589450.00001
[2025-06-03 22:13:28] 2025-06-03 17:32:45,565 | INFO     | mean x: 1748965935.5
[2025-06-03 22:13:28] 2025-06-03 17:32:45,565 | INFO     | mean y: 2582760.901098901
[2025-06-03 22:13:28] 2025-06-03 17:32:45,565 | INFO     | -- intersect: 55365943978.94451
[2025-06-03 22:13:28] 2025-06-03 17:32:45,565 | INFO     | intersect: 55365943978.94451
[2025-06-03 22:13:28] 2025-06-03 17:32:45,566 | INFO     | chi2: 0.17107997088515886
[2025-06-03 22:13:28] 2025-06-03 17:32:45,566 | INFO     | -- intersect: 55365943978.94451
[2025-06-03 22:13:28] 2025-06-03 17:32:45,566 | INFO     | current memory leak: -31.65 B/s (using 182 data points, chi2=0.17)
[2025-06-03 22:13:28] 2025-06-03 17:32:45,567 | INFO     | ..............................
[2025-06-03 22:13:28] 2025-06-03 17:32:45,568 | INFO     | . Timing measurements:
[2025-06-03 22:13:28] 2025-06-03 17:32:45,568 | INFO     | . get job = 0 s
[2025-06-03 22:13:28] 2025-06-03 17:32:45,568 | INFO     | . initial setup = 5 s
[2025-06-03 22:13:28] 2025-06-03 17:32:45,568 | INFO     | . payload setup = 166 s
[2025-06-03 22:13:28] 2025-06-03 17:32:45,568 | INFO     | . stage-in = 0 s
[2025-06-03 22:13:28] 2025-06-03 17:32:45,568 | INFO     | . payload execution = 13428 s
[2025-06-03 22:13:28] 2025-06-03 17:32:45,568 | INFO     | . stage-out = 3 s
[2025-06-03 22:13:28] 2025-06-03 17:32:45,568 | INFO     | . log creation = 1 s
[2025-06-03 22:13:28] 2025-06-03 17:32:45,568 | INFO     | ..............................
[2025-06-03 22:13:28] 2025-06-03 17:32:46,144 | INFO     | 
[2025-06-03 22:13:28] 2025-06-03 17:32:46,144 | INFO     | job summary report
[2025-06-03 22:13:28] 2025-06-03 17:32:46,144 | INFO     | --------------------------------------------------
[2025-06-03 22:13:28] 2025-06-03 17:32:46,144 | INFO     | PanDA job id: 6677441339
[2025-06-03 22:13:28] 2025-06-03 17:32:46,144 | INFO     | task id: 45006595
[2025-06-03 22:13:28] 2025-06-03 17:32:46,144 | INFO     | errors: (none)
[2025-06-03 22:13:28] 2025-06-03 17:32:46,145 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 22:13:28] 2025-06-03 17:32:46,145 | INFO     | pilot state: finished 
[2025-06-03 22:13:28] 2025-06-03 17:32:46,145 | INFO     | transexitcode: 0
[2025-06-03 22:13:28] 2025-06-03 17:32:46,145 | INFO     | exeerrorcode: 0
[2025-06-03 22:13:28] 2025-06-03 17:32:46,145 | INFO     | exeerrordiag: 
[2025-06-03 22:13:28] 2025-06-03 17:32:46,145 | INFO     | exitcode: 0
[2025-06-03 22:13:28] 2025-06-03 17:32:46,145 | INFO     | exitmsg: OK
[2025-06-03 22:13:28] 2025-06-03 17:32:46,145 | INFO     | cpuconsumptiontime: 49194 s
[2025-06-03 22:13:28] 2025-06-03 17:32:46,145 | INFO     | nevents: 400
[2025-06-03 22:13:28] 2025-06-03 17:32:46,145 | INFO     | neventsw: 0
[2025-06-03 22:13:28] 2025-06-03 17:32:46,145 | INFO     | pid: 16320
[2025-06-03 22:13:28] 2025-06-03 17:32:46,146 | INFO     | pgrp: 16320
[2025-06-03 22:13:28] 2025-06-03 17:32:46,146 | INFO     | corecount: 8
[2025-06-03 22:13:28] 2025-06-03 17:32:46,146 | INFO     | event service: False
[2025-06-03 22:13:28] 2025-06-03 17:32:46,146 | INFO     | sizes: {0: 2405011, 1: 2405210, 12: 2405210, 23: 2405238, 33: 2405266, 44: 2405322, 55: 2405478, 66: 2405506, 76: 2405534, 85: 2405796, 87: 2405824, 13599: 2435684
[2025-06-03 22:13:28] 2025-06-03 17:32:46,146 | INFO     | --------------------------------------------------
[2025-06-03 22:13:28] 2025-06-03 17:32:46,146 | INFO     | 
[2025-06-03 22:13:28] 2025-06-03 17:32:46,146 | INFO     | executing command: ls -lF /var/lib/boinc/slots/23
[2025-06-03 22:13:28] 2025-06-03 17:32:46,508 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 22:13:28] 2025-06-03 17:32:46,509 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 22:13:28] 2025-06-03 17:32:46,509 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 22:13:28] 2025-06-03 17:32:46,509 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 22:13:28] 2025-06-03 17:32:46,509 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 22:13:28] 2025-06-03 17:32:46,509 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 22:13:28] 2025-06-03 17:32:46,509 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 22:13:28] 2025-06-03 17:32:46,509 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 22:13:28] 2025-06-03 17:32:46,509 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 22:13:28] 2025-06-03 17:32:46,509 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 22:13:28] 2025-06-03 17:32:46,509 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 22:13:28] 2025-06-03 17:32:46,510 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 22:13:28] 2025-06-03 17:32:46,510 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 22:13:28] 2025-06-03 17:32:46,510 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 22:13:28] 2025-06-03 17:32:46,510 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 22:13:28] 2025-06-03 17:32:46,510 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 22:13:28] 2025-06-03 17:32:46,510 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 22:13:28] 2025-06-03 17:32:46,510 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 22:13:28] 2025-06-03 17:32:46,510 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 22:13:28] 2025-06-03 17:32:46,510 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 22:13:28] 2025-06-03 17:32:46,510 | INFO     | job 6677441339 has completed (purged errors)
[2025-06-03 22:13:28] 2025-06-03 17:32:46,510 | INFO     | overall cleanup function is called
[2025-06-03 22:13:28] 2025-06-03 17:32:47,519 | INFO     | --- collectZombieJob: --- 10, [16320]
[2025-06-03 22:13:28] 2025-06-03 17:32:47,519 | INFO     | zombie collector waiting for pid 16320
[2025-06-03 22:13:28] 2025-06-03 17:32:47,519 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 22:13:28] 2025-06-03 17:32:47,519 | INFO     | collected zombie processes
[2025-06-03 22:13:28] 2025-06-03 17:32:47,520 | INFO     | will attempt to kill all subprocesses of pid=16320
[2025-06-03 22:13:28] 2025-06-03 17:32:47,636 | INFO     | process IDs to be killed: [16320] (in reverse order)
[2025-06-03 22:13:28] 2025-06-03 17:32:48,625 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 22:13:28] 2025-06-03 17:32:48,626 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 22:13:28] 2025-06-03 17:32:48,629 | INFO     | did not find any defunct processes belonging to 16320
[2025-06-03 22:13:28] 2025-06-03 17:32:48,643 | INFO     | did not find any defunct processes belonging to 16320
[2025-06-03 22:13:28] 2025-06-03 17:32:48,644 | INFO     | ready for new job
[2025-06-03 22:13:28] 2025-06-03 17:32:48,644 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 22:13:28] 2025-06-03 17:32:48,646 | INFO     | **************************************
[2025-06-03 22:13:28] 2025-06-03 17:32:48,646 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 22:13:28] 2025-06-03 17:32:48,646 | INFO     | **************************************
[2025-06-03 22:13:28] 2025-06-03 17:32:48,646 | INFO     | 
[2025-06-03 22:13:28] 2025-06-03 17:32:48,647 | INFO     | pilot is running in a VM
[2025-06-03 22:13:28] 2025-06-03 17:32:48,647 | INFO     | architecture information:
[2025-06-03 22:13:28] 2025-06-03 17:32:48,655 | INFO     | executing command: cat /etc/os-release
[2025-06-03 22:13:28] 2025-06-03 17:32:48,858 | INFO     | cat /etc/os-release:
[2025-06-03 22:13:28] NAME="CentOS Linux"
[2025-06-03 22:13:28] VERSION="7 (Core)"
[2025-06-03 22:13:28] ID="centos"
[2025-06-03 22:13:28] ID_LIKE="rhel fedora"
[2025-06-03 22:13:28] VERSION_ID="7"
[2025-06-03 22:13:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 22:13:28] ANSI_COLOR="0;31"
[2025-06-03 22:13:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 22:13:28] HOME_URL="https://www.centos.org/"
[2025-06-03 22:13:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 22:13:28] 
[2025-06-03 22:13:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 22:13:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 22:13:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 22:13:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 22:13:28] 
[2025-06-03 22:13:28] 2025-06-03 17:32:48,859 | INFO     | **************************************
[2025-06-03 22:13:28] 2025-06-03 17:32:49,362 | INFO     | executing command: df -mP /var/lib/boinc/slots/23
[2025-06-03 22:13:28] 2025-06-03 17:32:49,590 | INFO     | sufficient remaining disk space (496895000576 B)
[2025-06-03 22:13:28] 2025-06-03 17:32:49,591 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 22:13:28] 2025-06-03 17:32:49,591 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 22:13:28] 2025-06-03 17:32:49,591 | INFO     | update_server=False
[2025-06-03 22:13:28] 2025-06-03 17:32:49,591 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 22:13:28] 2025-06-03 17:32:49,592 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 22:13:28] 2025-06-03 17:32:49,931 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 22:13:28] 2025-06-03 17:32:49,931 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 22:13:28] 2025-06-03 17:32:49,931 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 22:13:28] 2025-06-03 17:32:49,995 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:13:28] 2025-06-03 17:32:49,995 | INFO     | aborting loop
[2025-06-03 22:13:28] 2025-06-03 17:32:50,041 | INFO     | all data control threads have been joined
[2025-06-03 22:13:28] 2025-06-03 17:32:50,597 | INFO     | [job] retrieve thread has finished
[2025-06-03 22:13:28] 2025-06-03 17:32:50,727 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:13:28] 2025-06-03 17:32:50,807 | INFO     | all payload control threads have been joined
[2025-06-03 22:13:28] 2025-06-03 17:32:50,917 | INFO     | [job] validate thread has finished
[2025-06-03 22:13:28] 2025-06-03 17:32:50,926 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 22:13:28] 2025-06-03 17:32:51,001 | INFO     | [job] job monitor thread has finished
[2025-06-03 22:13:28] 2025-06-03 17:32:51,047 | INFO     | [data] control thread has finished
[2025-06-03 22:13:28] 2025-06-03 17:32:51,101 | INFO     | all job control threads have been joined
[2025-06-03 22:13:28] 2025-06-03 17:32:51,339 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 22:13:28] 2025-06-03 17:32:51,421 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 22:13:28] 2025-06-03 17:32:51,553 | INFO     | [payload] validate_post thread has finished
[2025-06-03 22:13:28] 2025-06-03 17:32:51,733 | INFO     | [job] queue monitor thread has finished
[2025-06-03 22:13:28] 2025-06-03 17:32:51,749 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 22:13:28] 2025-06-03 17:32:51,813 | INFO     | [payload] control thread has finished
[2025-06-03 22:13:28] 2025-06-03 17:32:51,985 | INFO     | [data] copytool_in thread has finished
[2025-06-03 22:13:28] 2025-06-03 17:32:51,986 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 22:13:28] 2025-06-03 17:32:51,987 | INFO     | [payload] failed_post thread has finished
[2025-06-03 22:13:28] 2025-06-03 17:32:52,107 | INFO     | [job] control thread has finished
[2025-06-03 22:13:28] 2025-06-03 17:32:52,933 | INFO     | [data] copytool_out thread has finished
[2025-06-03 22:13:28] 2025-06-03 17:32:53,601 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 22:13:28] 2025-06-03 17:32:54,268 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139881350911808)>', '<ExcThread(monitor, started 139880776595200)>']
[2025-06-03 22:13:28] 2025-06-03 17:32:54,961 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 22:13:28] 2025-06-03 17:32:54,961 | INFO     | [monitor] control thread has ended
[2025-06-03 22:13:28] 2025-06-03 17:32:59,294 | INFO     | all workflow threads have been joined
[2025-06-03 22:13:28] 2025-06-03 17:32:59,294 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 22:13:28] 2025-06-03 17:32:59,294 | INFO     | traces error code: 0
[2025-06-03 22:13:28] 2025-06-03 17:32:59,295 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 22:13:28] 2025-06-03 17:32:59,606 [wrapper] ==== pilot stdout END ====
[2025-06-03 22:13:28] 2025-06-03 17:32:59,644 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 22:13:28] 2025-06-03 17:32:59,689 [wrapper] pilotpid: 9696
[2025-06-03 22:13:28] 2025-06-03 17:32:59,771 [wrapper] Pilot exit status: 0
[2025-06-03 22:13:28] 2025-06-03 17:33:00,091 [wrapper] pandaids: 6677441339
[2025-06-03 22:13:28] 2025-06-03 17:33:00,965 [wrapper] cleanup supervisor_pilot 15469 9697
[2025-06-03 22:13:28] 2025-06-03 17:33:01,083 [wrapper] Test setup, not cleaning
[2025-06-03 22:13:28] 2025-06-03 17:33:01,167 [wrapper] apfmon messages muted
[2025-06-03 22:13:28] 2025-06-03 17:33:01,269 [wrapper] ==== wrapper stdout END ====
[2025-06-03 22:13:28] 2025-06-03 17:33:01,340 [wrapper] ==== wrapper stderr END ====
[2025-06-03 22:13:28]  *** Error codes and diagnostics ***
[2025-06-03 22:13:28]     "exeErrorCode": 0,
[2025-06-03 22:13:28]     "exeErrorDiag": "",
[2025-06-03 22:13:28]     "pilotErrorCode": 0,
[2025-06-03 22:13:28]     "pilotErrorDiag": "",
[2025-06-03 22:13:28]  *** Listing of results directory ***
[2025-06-03 22:13:28] total 394116
[2025-06-03 22:13:28] -rw-r--r--. 1 boinc boinc    495897 Jun  3 02:46 pilot3.tar.gz
[2025-06-03 22:13:28] -rwx------. 1 boinc boinc     37140 Jun  3 02:58 runpilot2-wrapper.sh
[2025-06-03 22:13:28] -rw-r--r--. 1 boinc boinc      5111 Jun  3 02:58 queuedata.json
[2025-06-03 22:13:28] -rw-r--r--. 1 boinc boinc       100 Jun  3 15:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 22:13:28] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 15:37 run_atlas
[2025-06-03 22:13:28] -rw-r--r--. 1 boinc boinc       105 Jun  3 15:37 job.xml
[2025-06-03 22:13:28] -rw-r--r--. 2 boinc boinc 218194527 Jun  3 15:37 EVNT.45006593._000631.pool.root.1
[2025-06-03 22:13:28] drwxrwx--x. 2 boinc boinc        68 Jun  3 15:37 shared
[2025-06-03 22:13:28] -rw-r--r--. 2 boinc boinc    508879 Jun  3 15:37 input.tar.gz
[2025-06-03 22:13:28] -rw-r--r--. 1 boinc boinc      6392 Jun  3 15:37 init_data.xml
[2025-06-03 22:13:28] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:37 start_atlas.sh
[2025-06-03 22:13:28] -rw-r--r--. 1 boinc boinc         0 Jun  3 15:37 boinc_lockfile
[2025-06-03 22:13:28] -rw-r--r--. 1 boinc boinc      2523 Jun  3 15:38 pandaJob.out
[2025-06-03 22:13:28] -rw-------. 1 boinc boinc    982724 Jun  3 15:41 agis_schedconf.cvmfs.json
[2025-06-03 22:13:28] drwx------. 4 boinc boinc      4096 Jun  3 15:41 pilot3
[2025-06-03 22:13:28] -rw-------. 1 boinc boinc 178428754 Jun  3 19:29 HITS.45006595._015761.pool.root.1
[2025-06-03 22:13:28] -rw-r--r--. 1 boinc boinc       531 Jun  3 19:29 boinc_task_state.xml
[2025-06-03 22:13:28] -rw-------. 1 boinc boinc      1019 Jun  3 19:31 memory_monitor_summary.json
[2025-06-03 22:13:28] -rw-------. 1 boinc boinc   1603667 Jun  3 19:31 agis_ddmendpoints.agis.ALL.json
[2025-06-03 22:13:28] -rw-------. 1 boinc boinc    377623 Jun  3 19:31 log.45006595._015761.job.log.tgz.1
[2025-06-03 22:13:28] -rw-------. 1 boinc boinc      7696 Jun  3 19:32 heartbeat.json
[2025-06-03 22:13:28] -rw-------. 1 boinc boinc        95 Jun  3 19:32 pilot_heartbeat.json
[2025-06-03 22:13:28] -rw-------. 1 boinc boinc      4417 Jun  3 19:32 pilotlog.txt
[2025-06-03 22:13:28] -rw-------. 1 boinc boinc   1187694 Jun  3 19:33 log.45006595._015761.job.log.1
[2025-06-03 22:13:28] -rw-------. 1 boinc boinc       357 Jun  3 19:33 output.list
[2025-06-03 22:13:28] -rw-r--r--. 1 boinc boinc       620 Jun  3 19:33 runtime_log
[2025-06-03 22:13:28] -rw-------. 1 boinc boinc   1587200 Jun  3 19:33 result.tar.gz
[2025-06-03 22:13:28] -rw-r--r--. 1 boinc boinc      8673 Jun  3 19:33 runtime_log.err
[2025-06-03 22:13:28] -rw-------. 1 boinc boinc       656 Jun  3 19:33 EubLDmQAVg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLKhKDmq3mLDo.diag
[2025-06-03 22:13:28] -rw-r--r--. 1 boinc boinc      8192 Jun  3 22:13 boinc_mmap_file
[2025-06-03 22:13:28] -rw-r--r--. 1 boinc boinc        28 Jun  3 22:13 wrapper_checkpoint.txt
[2025-06-03 22:13:28] -rw-r--r--. 1 boinc boinc     20530 Jun  3 22:13 stderr.txt
[2025-06-03 22:13:28] HITS file was successfully produced:
[2025-06-03 22:13:28] -rw-------. 1 boinc boinc 178428754 Jun  3 19:29 shared/HITS.pool.root.1
[2025-06-03 22:13:28]  *** Contents of shared directory: ***
[2025-06-03 22:13:28] total 389400
[2025-06-03 22:13:28] -rw-r--r--. 2 boinc boinc 218194527 Jun  3 15:37 ATLAS.root_0
[2025-06-03 22:13:28] -rw-r--r--. 2 boinc boinc    508879 Jun  3 15:37 input.tar.gz
[2025-06-03 22:13:28] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:37 start_atlas.sh
[2025-06-03 22:13:28] -rw-------. 1 boinc boinc 178428754 Jun  3 19:29 HITS.pool.root.1
[2025-06-03 22:13:28] -rw-------. 1 boinc boinc   1587200 Jun  3 19:33 result.tar.gz
22:13:30 (5940): run_atlas exited; CPU time 49380.003491
22:13:30 (5940): called boinc_finish(0)

</stderr_txt>
]]>

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