Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:37:00 (29612): wrapper (7.7.26015): starting
11:37:00 (29612): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:37:00] Arguments: --nthreads 8
[2025-06-03 11:37:00] Threads: 8
[2025-06-03 11:37:00] Checking for CVMFS
[2025-06-03 11:37:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:37:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:37:01] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:37:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:37:02] 2.11.2.0 27863 31778 96076 146735 3 114 17680051 25165825 4353 130560 0 15228563 99.764 18389096 4908 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 11:37:02] CVMFS is ok
[2025-06-03 11:37:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:37:02] Checking for apptainer binary...
[2025-06-03 11:37:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:37:02] Running /usr/bin/apptainer --version
[2025-06-03 11:37:02] apptainer version 1.3.2-1.el7
[2025-06-03 11:37:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:37:04] cg-vwn495.simple-grid.lan
[2025-06-03 11:37:04] apptainer works
[2025-06-03 11:37:04] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:37:04] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:37:04] Starting ATLAS job with PandaID=6677441111
[2025-06-03 11:37:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:37:50]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:37:50] 2025-06-03 13:02:53,304 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6677441111/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:37:50] 2025-06-03 13:02:53,305 | INFO     | extracted standard info from prmon json
[2025-06-03 18:37:50] 2025-06-03 13:02:53,305 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:37:50] 2025-06-03 13:02:53,305 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:37:50] 2025-06-03 13:02:53,305 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:37:50] 2025-06-03 13:02:53,305 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:37:50] 2025-06-03 13:02:53,309 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:37:50] 2025-06-03 13:02:53,310 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 18:37:50] 2025-06-03 13:02:53,311 | INFO     | sum of deviations: 20115479377.0
[2025-06-03 18:37:50] 2025-06-03 13:02:53,311 | INFO     | mean x: 1748949579.0
[2025-06-03 18:37:50] 2025-06-03 13:02:53,311 | INFO     | mean y: 2465283.175879397
[2025-06-03 18:37:50] 2025-06-03 13:02:53,311 | INFO     | -- intersect: -14394832578.845758
[2025-06-03 18:37:50] 2025-06-03 13:02:53,312 | INFO     | intersect: -14394832578.845758
[2025-06-03 18:37:50] 2025-06-03 13:02:53,312 | INFO     | chi2: 2.5175589139647556
[2025-06-03 18:37:50] 2025-06-03 13:02:53,312 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 18:37:50] 2025-06-03 13:02:53,314 | INFO     | sum of deviations: 32822296962.000008
[2025-06-03 18:37:50] 2025-06-03 13:02:53,314 | INFO     | mean x: 1748949426.5
[2025-06-03 18:37:50] 2025-06-03 13:02:53,314 | INFO     | mean y: 2475845.288659794
[2025-06-03 18:37:50] 2025-06-03 13:02:53,314 | INFO     | -- intersect: -25353139082.495785
[2025-06-03 18:37:50] 2025-06-03 13:02:53,314 | INFO     | intersect: -25353139082.495785
[2025-06-03 18:37:50] 2025-06-03 13:02:53,314 | INFO     | chi2: 1.7426529216249498
[2025-06-03 18:37:50] 2025-06-03 13:02:53,314 | INFO     | current chi2=1.7426529216249498 (change=30.780053965825648 %)
[2025-06-03 18:37:50] 2025-06-03 13:02:53,315 | INFO     | sum of square deviations: 2093397390.0
[2025-06-03 18:37:50] 2025-06-03 13:02:53,316 | INFO     | sum of deviations: 32160788257.000004
[2025-06-03 18:37:50] 2025-06-03 13:02:53,316 | INFO     | mean x: 1748949274.0
[2025-06-03 18:37:50] 2025-06-03 13:02:53,316 | INFO     | mean y: 2475253.8095238097
[2025-06-03 18:37:50] 2025-06-03 13:02:53,316 | INFO     | -- intersect: -26866569076.73102
[2025-06-03 18:37:50] 2025-06-03 13:02:53,316 | INFO     | intersect: -26866569076.73102
[2025-06-03 18:37:50] 2025-06-03 13:02:53,317 | INFO     | chi2: 1.7433987413289667
[2025-06-03 18:37:50] 2025-06-03 13:02:53,317 | INFO     | current chi2=1.7433987413289667 (change=-0.042797948734475254 %)
[2025-06-03 18:37:50] 2025-06-03 13:02:53,317 | INFO     | right removable region: 188
[2025-06-03 18:37:50] 2025-06-03 13:02:53,317 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 18:37:50] 2025-06-03 13:02:53,325 | INFO     | sum of deviations: -15487168640.5
[2025-06-03 18:37:50] 2025-06-03 13:02:53,325 | INFO     | mean x: 1748949731.5
[2025-06-03 18:37:50] 2025-06-03 13:02:53,325 | INFO     | mean y: 2495233.1391752576
[2025-06-03 18:37:50] 2025-06-03 13:02:53,325 | INFO     | -- intersect: 11966519363.004307
[2025-06-03 18:37:50] 2025-06-03 13:02:53,325 | INFO     | intersect: 11966519363.004307
[2025-06-03 18:37:50] 2025-06-03 13:02:53,326 | INFO     | chi2: 0.8355574843802924
[2025-06-03 18:37:50] 2025-06-03 13:02:53,326 | INFO     | current chi2=0.8355574843802924 (change=66.8108070978795 %)
[2025-06-03 18:37:50] 2025-06-03 13:02:53,326 | INFO     | sum of square deviations: 2093397390.0
[2025-06-03 18:37:50] 2025-06-03 13:02:53,327 | INFO     | sum of deviations: -19104340326.999996
[2025-06-03 18:37:50] 2025-06-03 13:02:53,327 | INFO     | mean x: 1748949884.0
[2025-06-03 18:37:50] 2025-06-03 13:02:53,327 | INFO     | mean y: 2498444.2275132276
[2025-06-03 18:37:50] 2025-06-03 13:02:53,328 | INFO     | -- intersect: 15963411531.4475
[2025-06-03 18:37:50] 2025-06-03 13:02:53,328 | INFO     | intersect: 15963411531.4475
[2025-06-03 18:37:50] 2025-06-03 13:02:53,328 | INFO     | chi2: 0.8049282735201209
[2025-06-03 18:37:50] 2025-06-03 13:02:53,328 | INFO     | current chi2=0.8049282735201209 (change=3.665721561083055 %)
[2025-06-03 18:37:50] 2025-06-03 13:02:53,328 | INFO     | left removable region: 20
[2025-06-03 18:37:50] 2025-06-03 13:02:53,328 | INFO     | sum of square deviations: 1470248962.0
[2025-06-03 18:37:50] 2025-06-03 13:02:53,329 | INFO     | sum of deviations: -6791196032.5
[2025-06-03 18:37:50] 2025-06-03 13:02:53,330 | INFO     | mean x: 1748949853.5
[2025-06-03 18:37:50] 2025-06-03 13:02:53,330 | INFO     | mean y: 2512120.0535714286
[2025-06-03 18:37:50] 2025-06-03 13:02:53,330 | INFO     | -- intersect: 8081049573.9917
[2025-06-03 18:37:50] 2025-06-03 13:02:53,330 | INFO     | intersect: 8081049573.9917
[2025-06-03 18:37:50] 2025-06-03 13:02:53,330 | INFO     | chi2: 0.004475291005819054
[2025-06-03 18:37:50] 2025-06-03 13:02:53,330 | INFO     | -- intersect: 8081049573.9917
[2025-06-03 18:37:50] 2025-06-03 13:02:53,330 | INFO     | current memory leak: -4.62 B/s (using 168 data points, chi2=0.00)
[2025-06-03 18:37:50] 2025-06-03 13:02:53,331 | INFO     | ..............................
[2025-06-03 18:37:50] 2025-06-03 13:02:53,331 | INFO     | . Timing measurements:
[2025-06-03 18:37:50] 2025-06-03 13:02:53,331 | INFO     | . get job = 0 s
[2025-06-03 18:37:50] 2025-06-03 13:02:53,331 | INFO     | . initial setup = 2 s
[2025-06-03 18:37:50] 2025-06-03 13:02:53,332 | INFO     | . payload setup = 22 s
[2025-06-03 18:37:50] 2025-06-03 13:02:53,332 | INFO     | . stage-in = 0 s
[2025-06-03 18:37:50] 2025-06-03 13:02:53,332 | INFO     | . payload execution = 12160 s
[2025-06-03 18:37:50] 2025-06-03 13:02:53,332 | INFO     | . stage-out = 3 s
[2025-06-03 18:37:50] 2025-06-03 13:02:53,332 | INFO     | . log creation = 0 s
[2025-06-03 18:37:50] 2025-06-03 13:02:53,332 | INFO     | ..............................
[2025-06-03 18:37:50] 2025-06-03 13:02:53,454 | INFO     | 
[2025-06-03 18:37:50] 2025-06-03 13:02:53,454 | INFO     | job summary report
[2025-06-03 18:37:50] 2025-06-03 13:02:53,454 | INFO     | --------------------------------------------------
[2025-06-03 18:37:50] 2025-06-03 13:02:53,454 | INFO     | PanDA job id: 6677441111
[2025-06-03 18:37:50] 2025-06-03 13:02:53,454 | INFO     | task id: 45006595
[2025-06-03 18:37:50] 2025-06-03 13:02:53,454 | INFO     | errors: (none)
[2025-06-03 18:37:50] 2025-06-03 13:02:53,455 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:37:50] 2025-06-03 13:02:53,455 | INFO     | pilot state: finished 
[2025-06-03 18:37:50] 2025-06-03 13:02:53,455 | INFO     | transexitcode: 0
[2025-06-03 18:37:50] 2025-06-03 13:02:53,455 | INFO     | exeerrorcode: 0
[2025-06-03 18:37:50] 2025-06-03 13:02:53,455 | INFO     | exeerrordiag: 
[2025-06-03 18:37:50] 2025-06-03 13:02:53,455 | INFO     | exitcode: 0
[2025-06-03 18:37:50] 2025-06-03 13:02:53,455 | INFO     | exitmsg: OK
[2025-06-03 18:37:50] 2025-06-03 13:02:53,455 | INFO     | cpuconsumptiontime: 44969 s
[2025-06-03 18:37:50] 2025-06-03 13:02:53,455 | INFO     | nevents: 400
[2025-06-03 18:37:50] 2025-06-03 13:02:53,455 | INFO     | neventsw: 0
[2025-06-03 18:37:50] 2025-06-03 13:02:53,456 | INFO     | pid: 13445
[2025-06-03 18:37:50] 2025-06-03 13:02:53,456 | INFO     | pgrp: 13445
[2025-06-03 18:37:50] 2025-06-03 13:02:53,456 | INFO     | corecount: 8
[2025-06-03 18:37:50] 2025-06-03 13:02:53,456 | INFO     | event service: False
[2025-06-03 18:37:50] 2025-06-03 13:02:53,456 | INFO     | sizes: {0: 2404354, 1: 2405211, 2: 2405211, 12: 2405239, 13: 2405473, 23: 2405529, 12187: 2434644, 12192: 2443587, 12193: 2443643, 12294: 2443813}
[2025-06-03 18:37:50] 2025-06-03 13:02:53,456 | INFO     | --------------------------------------------------
[2025-06-03 18:37:50] 2025-06-03 13:02:53,456 | INFO     | 
[2025-06-03 18:37:50] 2025-06-03 13:02:53,456 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-03 18:37:50] 2025-06-03 13:02:54,011 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:37:50] 2025-06-03 13:02:54,011 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:37:50] 2025-06-03 13:02:54,011 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:37:50] 2025-06-03 13:02:54,012 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:37:50] 2025-06-03 13:02:54,012 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:37:50] 2025-06-03 13:02:54,012 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:37:50] 2025-06-03 13:02:54,012 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:37:50] 2025-06-03 13:02:54,012 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:37:50] 2025-06-03 13:02:54,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:37:50] 2025-06-03 13:02:54,012 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:37:50] 2025-06-03 13:02:54,012 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:37:50] 2025-06-03 13:02:54,012 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:37:50] 2025-06-03 13:02:54,012 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:37:50] 2025-06-03 13:02:54,013 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:37:50] 2025-06-03 13:02:54,013 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:37:50] 2025-06-03 13:02:54,013 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:37:50] 2025-06-03 13:02:54,013 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:37:50] 2025-06-03 13:02:54,013 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:37:50] 2025-06-03 13:02:54,013 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:37:50] 2025-06-03 13:02:54,013 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:37:50] 2025-06-03 13:02:54,013 | INFO     | job 6677441111 has completed (purged errors)
[2025-06-03 18:37:50] 2025-06-03 13:02:54,013 | INFO     | overall cleanup function is called
[2025-06-03 18:37:50] 2025-06-03 13:02:55,021 | INFO     | --- collectZombieJob: --- 10, [13445]
[2025-06-03 18:37:50] 2025-06-03 13:02:55,022 | INFO     | zombie collector waiting for pid 13445
[2025-06-03 18:37:50] 2025-06-03 13:02:55,022 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:37:50] 2025-06-03 13:02:55,022 | INFO     | collected zombie processes
[2025-06-03 18:37:50] 2025-06-03 13:02:55,022 | INFO     | will attempt to kill all subprocesses of pid=13445
[2025-06-03 18:37:50] 2025-06-03 13:02:55,156 | INFO     | process IDs to be killed: [13445] (in reverse order)
[2025-06-03 18:37:50] 2025-06-03 13:02:55,737 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:37:50] 2025-06-03 13:02:55,737 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:37:50] 2025-06-03 13:02:55,741 | INFO     | did not find any defunct processes belonging to 13445
[2025-06-03 18:37:50] 2025-06-03 13:02:55,744 | INFO     | did not find any defunct processes belonging to 13445
[2025-06-03 18:37:50] 2025-06-03 13:02:55,745 | INFO     | ready for new job
[2025-06-03 18:37:50] 2025-06-03 13:02:55,745 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:37:50] 2025-06-03 13:02:55,747 | INFO     | **************************************
[2025-06-03 18:37:50] 2025-06-03 13:02:55,747 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:37:50] 2025-06-03 13:02:55,747 | INFO     | **************************************
[2025-06-03 18:37:50] 2025-06-03 13:02:55,747 | INFO     | 
[2025-06-03 18:37:50] 2025-06-03 13:02:55,748 | INFO     | pilot is running in a VM
[2025-06-03 18:37:50] 2025-06-03 13:02:55,748 | INFO     | architecture information:
[2025-06-03 18:37:50] 2025-06-03 13:02:55,748 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:37:50] 2025-06-03 13:02:55,822 | INFO     | cat /etc/os-release:
[2025-06-03 18:37:50] NAME="CentOS Linux"
[2025-06-03 18:37:50] VERSION="7 (Core)"
[2025-06-03 18:37:50] ID="centos"
[2025-06-03 18:37:50] ID_LIKE="rhel fedora"
[2025-06-03 18:37:50] VERSION_ID="7"
[2025-06-03 18:37:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:37:50] ANSI_COLOR="0;31"
[2025-06-03 18:37:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:37:50] HOME_URL="https://www.centos.org/"
[2025-06-03 18:37:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:37:50] 
[2025-06-03 18:37:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:37:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:37:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:37:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:37:50] 
[2025-06-03 18:37:50] 2025-06-03 13:02:55,822 | INFO     | **************************************
[2025-06-03 18:37:50] 2025-06-03 13:02:56,325 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-03 18:37:50] 2025-06-03 13:02:56,475 | INFO     | sufficient remaining disk space (496992518144 B)
[2025-06-03 18:37:50] 2025-06-03 13:02:56,476 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:37:50] 2025-06-03 13:02:56,476 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:37:50] 2025-06-03 13:02:56,476 | INFO     | update_server=False
[2025-06-03 18:37:50] 2025-06-03 13:02:56,476 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:37:50] 2025-06-03 13:02:56,696 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:37:50] 2025-06-03 13:02:56,696 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:37:50] 2025-06-03 13:02:56,696 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:37:50] 2025-06-03 13:02:56,750 | INFO     | all payload control threads have been joined
[2025-06-03 18:37:50] 2025-06-03 13:02:56,978 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:37:50] 2025-06-03 13:02:56,979 | INFO     | aborting loop
[2025-06-03 18:37:50] 2025-06-03 13:02:57,105 | INFO     | all data control threads have been joined
[2025-06-03 18:37:50] 2025-06-03 13:02:57,224 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:37:50] 2025-06-03 13:02:57,293 | INFO     | all job control threads have been joined
[2025-06-03 18:37:50] 2025-06-03 13:02:57,481 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:37:50] 2025-06-03 13:02:57,757 | INFO     | [payload] control thread has finished
[2025-06-03 18:37:50] 2025-06-03 13:02:57,843 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:37:50] 2025-06-03 13:02:57,965 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:37:50] 2025-06-03 13:02:57,985 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:37:50] 2025-06-03 13:02:58,112 | INFO     | [data] control thread has finished
[2025-06-03 18:37:50] 2025-06-03 13:02:58,124 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:37:50] 2025-06-03 13:02:58,285 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:37:50] 2025-06-03 13:02:58,300 | INFO     | [job] control thread has finished
[2025-06-03 18:37:50] 2025-06-03 13:02:58,453 | INFO     | [job] validate thread has finished
[2025-06-03 18:37:50] 2025-06-03 13:02:58,473 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:37:50] 2025-06-03 13:02:58,514 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:37:50] 2025-06-03 13:02:58,615 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:37:50] 2025-06-03 13:02:58,643 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:37:50] 2025-06-03 13:02:58,969 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:37:50] 2025-06-03 13:02:59,234 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:37:50] 2025-06-03 13:02:59,480 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:37:50] 2025-06-03 13:03:02,654 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:37:50] 2025-06-03 13:03:02,992 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140322995799872)>', '<ExcThread(monitor, started 140322394851072)>']
[2025-06-03 18:37:50] 2025-06-03 13:03:03,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:37:50] 2025-06-03 13:03:03,737 | INFO     | [monitor] control thread has ended
[2025-06-03 18:37:50] 2025-06-03 13:03:08,017 | INFO     | all workflow threads have been joined
[2025-06-03 18:37:50] 2025-06-03 13:03:08,018 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:37:50] 2025-06-03 13:03:08,018 | INFO     | traces error code: 0
[2025-06-03 18:37:50] 2025-06-03 13:03:08,018 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:37:50] 2025-06-03 13:03:08,346 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:37:50] 2025-06-03 13:03:08,424 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:37:50] 2025-06-03 13:03:08,531 [wrapper] pilotpid: 894
[2025-06-03 18:37:50] 2025-06-03 13:03:08,620 [wrapper] Pilot exit status: 0
[2025-06-03 18:37:50] 2025-06-03 13:03:09,180 [wrapper] pandaids: 6677441111
[2025-06-03 18:37:50] 2025-06-03 13:03:09,962 [wrapper] cleanup supervisor_pilot 11986 895
[2025-06-03 18:37:50] 2025-06-03 13:03:09,978 [wrapper] Test setup, not cleaning
[2025-06-03 18:37:50] 2025-06-03 13:03:09,982 [wrapper] apfmon messages muted
[2025-06-03 18:37:50] 2025-06-03 13:03:09,988 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:37:50] 2025-06-03 13:03:10,038 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:37:50]  *** Error codes and diagnostics ***
[2025-06-03 18:37:50]     "exeErrorCode": 0,
[2025-06-03 18:37:50]     "exeErrorDiag": "",
[2025-06-03 18:37:50]     "pilotErrorCode": 0,
[2025-06-03 18:37:50]     "pilotErrorDiag": "",
[2025-06-03 18:37:50]  *** Listing of results directory ***
[2025-06-03 18:37:50] total 389988
[2025-06-03 18:37:50] -rw-r--r--. 1 boinc boinc    495897 Jun  3 02:46 pilot3.tar.gz
[2025-06-03 18:37:50] -rwx------. 1 boinc boinc     37140 Jun  3 02:47 runpilot2-wrapper.sh
[2025-06-03 18:37:50] -rw-r--r--. 1 boinc boinc      5111 Jun  3 02:47 queuedata.json
[2025-06-03 18:37:50] -rw-r--r--. 1 boinc boinc       100 Jun  3 11:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:37:50] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 11:36 run_atlas
[2025-06-03 18:37:50] -rw-r--r--. 1 boinc boinc       105 Jun  3 11:36 job.xml
[2025-06-03 18:37:50] -rw-r--r--. 1 boinc boinc      6392 Jun  3 11:37 init_data.xml
[2025-06-03 18:37:50] -rw-r--r--. 2 boinc boinc 213906017 Jun  3 11:37 EVNT.45006593._000624.pool.root.1
[2025-06-03 18:37:50] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:37 start_atlas.sh
[2025-06-03 18:37:50] drwxrwx--x. 2 boinc boinc        68 Jun  3 11:37 shared
[2025-06-03 18:37:50] -rw-r--r--. 2 boinc boinc    508874 Jun  3 11:37 input.tar.gz
[2025-06-03 18:37:50] -rw-r--r--. 1 boinc boinc         0 Jun  3 11:37 boinc_lockfile
[2025-06-03 18:37:50] -rw-r--r--. 1 boinc boinc      2524 Jun  3 11:37 pandaJob.out
[2025-06-03 18:37:50] -rw-------. 1 boinc boinc    985498 Jun  3 11:37 agis_schedconf.cvmfs.json
[2025-06-03 18:37:50] drwx------. 4 boinc boinc      4096 Jun  3 11:37 pilot3
[2025-06-03 18:37:50] -rw-------. 1 boinc boinc 178727588 Jun  3 14:59 HITS.45006595._015591.pool.root.1
[2025-06-03 18:37:50] -rw-r--r--. 1 boinc boinc       531 Jun  3 15:00 boinc_task_state.xml
[2025-06-03 18:37:50] -rw-------. 1 boinc boinc      1020 Jun  3 15:01 memory_monitor_summary.json
[2025-06-03 18:37:50] -rw-------. 1 boinc boinc   1603667 Jun  3 15:01 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:37:50] -rw-------. 1 boinc boinc    370405 Jun  3 15:01 log.45006595._015591.job.log.tgz.1
[2025-06-03 18:37:50] -rw-------. 1 boinc boinc        95 Jun  3 15:02 pilot_heartbeat.json
[2025-06-03 18:37:50] -rw-------. 1 boinc boinc      7692 Jun  3 15:02 heartbeat.json
[2025-06-03 18:37:50] -rw-------. 1 boinc boinc      4417 Jun  3 15:03 pilotlog.txt
[2025-06-03 18:37:50] -rw-------. 1 boinc boinc   1076845 Jun  3 15:03 log.45006595._015591.job.log.1
[2025-06-03 18:37:50] -rw-------. 1 boinc boinc       357 Jun  3 15:03 output.list
[2025-06-03 18:37:50] -rw-r--r--. 1 boinc boinc       620 Jun  3 15:03 runtime_log
[2025-06-03 18:37:50] -rw-------. 1 boinc boinc   1464320 Jun  3 15:03 result.tar.gz
[2025-06-03 18:37:50] -rw-r--r--. 1 boinc boinc      8673 Jun  3 15:03 runtime_log.err
[2025-06-03 18:37:50] -rw-------. 1 boinc boinc       657 Jun  3 15:03 lkvMDmRzUg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmR0WKDms6nvVn.diag
[2025-06-03 18:37:50] -rw-r--r--. 1 boinc boinc      8192 Jun  3 18:37 boinc_mmap_file
[2025-06-03 18:37:50] -rw-r--r--. 1 boinc boinc        28 Jun  3 18:37 wrapper_checkpoint.txt
[2025-06-03 18:37:50] -rw-r--r--. 1 boinc boinc     20510 Jun  3 18:37 stderr.txt
[2025-06-03 18:37:51] HITS file was successfully produced:
[2025-06-03 18:37:51] -rw-------. 1 boinc boinc 178727588 Jun  3 14:59 shared/HITS.pool.root.1
[2025-06-03 18:37:51]  *** Contents of shared directory: ***
[2025-06-03 18:37:51] total 385384
[2025-06-03 18:37:51] -rw-r--r--. 2 boinc boinc 213906017 Jun  3 11:37 ATLAS.root_0
[2025-06-03 18:37:51] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:37 start_atlas.sh
[2025-06-03 18:37:51] -rw-r--r--. 2 boinc boinc    508874 Jun  3 11:37 input.tar.gz
[2025-06-03 18:37:51] -rw-------. 1 boinc boinc 178727588 Jun  3 14:59 HITS.pool.root.1
[2025-06-03 18:37:51] -rw-------. 1 boinc boinc   1464320 Jun  3 15:03 result.tar.gz
18:37:52 (29612): run_atlas exited; CPU time 45112.769839
18:37:52 (29612): called boinc_finish(0)

</stderr_txt>
]]>

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