Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:22:40 (9719): wrapper (7.7.26015): starting
15:22:40 (9719): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 15:22:40] Arguments: --nthreads 8
[2025-06-03 15:22:40] Threads: 8
[2025-06-03 15:22:40] Checking for CVMFS
[2025-06-03 15:22:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:22:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:22:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:22:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:22:44] 2.11.2.0 7198 31841 95240 146741 0 112 21250478 25165825 4251 130560 0 16487559 99.804 17936752 2126 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 15:22:44] CVMFS is ok
[2025-06-03 15:22:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:22:44] Checking for apptainer binary...
[2025-06-03 15:22:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:22:44] Running /usr/bin/apptainer --version
[2025-06-03 15:22:44] apptainer version 1.3.2-1.el7
[2025-06-03 15:22:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:32:28] cg-vwn468.simple-grid.lan
[2025-06-03 15:32:28] apptainer works
[2025-06-03 15:32:28] Set ATHENA_PROC_NUMBER=8
[2025-06-03 15:32:28] Set ATHENA_CORE_NUMBER=8
[2025-06-03 15:32:28] Starting ATLAS job with PandaID=6677440908
[2025-06-03 15:32:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 19:40:44]  *** The last 200 lines of the pilot log: ***
[2025-06-03 19:40:44] 2025-06-03 17:17:39,728 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:40:44] 2025-06-03 17:17:39,729 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:40:44] 2025-06-03 17:17:39,729 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:40:44] 2025-06-03 17:17:39,734 | INFO     | fitting pss+swap vs Time
[2025-06-03 19:40:44] 2025-06-03 17:17:39,734 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 19:40:44] 2025-06-03 17:17:39,736 | INFO     | sum of deviations: 11122778978.999992
[2025-06-03 19:40:44] 2025-06-03 17:17:39,736 | INFO     | mean x: 1748964568.0
[2025-06-03 19:40:44] 2025-06-03 17:17:39,736 | INFO     | mean y: 2524374.6698564594
[2025-06-03 19:40:44] 2025-06-03 17:17:39,736 | INFO     | -- intersect: -6869536198.869605
[2025-06-03 19:40:44] 2025-06-03 17:17:39,736 | INFO     | intersect: -6869536198.869605
[2025-06-03 19:40:44] 2025-06-03 17:17:39,737 | INFO     | chi2: 6.79551593571103
[2025-06-03 19:40:44] 2025-06-03 17:17:39,737 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 19:40:44] 2025-06-03 17:17:39,743 | INFO     | sum of deviations: 26138328315.5
[2025-06-03 19:40:44] 2025-06-03 17:17:39,743 | INFO     | mean x: 1748964415.5
[2025-06-03 19:40:44] 2025-06-03 17:17:39,743 | INFO     | mean y: 2535714.1225490198
[2025-06-03 19:40:44] 2025-06-03 17:17:39,744 | INFO     | -- intersect: -17363484080.947605
[2025-06-03 19:40:44] 2025-06-03 17:17:39,744 | INFO     | intersect: -17363484080.947605
[2025-06-03 19:40:44] 2025-06-03 17:17:39,744 | INFO     | chi2: 6.088274431596281
[2025-06-03 19:40:44] 2025-06-03 17:17:39,744 | INFO     | current chi2=6.088274431596281 (change=10.407473263334339 %)
[2025-06-03 19:40:44] 2025-06-03 17:17:39,744 | INFO     | right removable region: 203
[2025-06-03 19:40:44] 2025-06-03 17:17:39,745 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 19:40:44] 2025-06-03 17:17:39,746 | INFO     | sum of deviations: -63532928620.0
[2025-06-03 19:40:44] 2025-06-03 17:17:39,746 | INFO     | mean x: 1748964720.5
[2025-06-03 19:40:44] 2025-06-03 17:17:39,747 | INFO     | mean y: 2581720.4607843137
[2025-06-03 19:40:44] 2025-06-03 17:17:39,747 | INFO     | -- intersect: 42213172816.49422
[2025-06-03 19:40:44] 2025-06-03 17:17:39,747 | INFO     | intersect: 42213172816.49422
[2025-06-03 19:40:44] 2025-06-03 17:17:39,747 | INFO     | chi2: 1.9201736389785762
[2025-06-03 19:40:44] 2025-06-03 17:17:39,747 | INFO     | current chi2=1.9201736389785762 (change=71.74351944511092 %)
[2025-06-03 19:40:44] 2025-06-03 17:17:39,748 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 19:40:44] 2025-06-03 17:17:39,749 | INFO     | sum of deviations: -90164147153.0
[2025-06-03 19:40:44] 2025-06-03 17:17:39,749 | INFO     | mean x: 1748964873.0
[2025-06-03 19:40:44] 2025-06-03 17:17:39,749 | INFO     | mean y: 2603033.1256281408
[2025-06-03 19:40:44] 2025-06-03 17:17:39,750 | INFO     | -- intersect: 64536557722.89705
[2025-06-03 19:40:44] 2025-06-03 17:17:39,756 | INFO     | intersect: 64536557722.89705
[2025-06-03 19:40:44] 2025-06-03 17:17:39,757 | INFO     | chi2: 0.9814679349808596
[2025-06-03 19:40:44] 2025-06-03 17:17:39,757 | INFO     | current chi2=0.9814679349808596 (change=48.88650093629319 %)
[2025-06-03 19:40:44] 2025-06-03 17:17:39,757 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 19:40:44] 2025-06-03 17:17:39,758 | INFO     | sum of deviations: -88822505040.0
[2025-06-03 19:40:44] 2025-06-03 17:17:39,759 | INFO     | mean x: 1748965025.5
[2025-06-03 19:40:44] 2025-06-03 17:17:39,759 | INFO     | mean y: 2601860.175257732
[2025-06-03 19:40:44] 2025-06-03 17:17:39,759 | INFO     | -- intersect: 68619655821.89264
[2025-06-03 19:40:44] 2025-06-03 17:17:39,759 | INFO     | intersect: 68619655821.89264
[2025-06-03 19:40:44] 2025-06-03 17:17:39,759 | INFO     | chi2: 0.957088083256788
[2025-06-03 19:40:44] 2025-06-03 17:17:39,760 | INFO     | current chi2=0.957088083256788 (change=2.4840191773098623 %)
[2025-06-03 19:40:44] 2025-06-03 17:17:39,760 | INFO     | left removable region: 30
[2025-06-03 19:40:44] 2025-06-03 17:17:39,760 | INFO     | sum of square deviations: 1605470102.0
[2025-06-03 19:40:44] 2025-06-03 17:17:39,761 | INFO     | sum of deviations: -59767816409.00001
[2025-06-03 19:40:44] 2025-06-03 17:17:39,761 | INFO     | mean x: 1748965300.0
[2025-06-03 19:40:44] 2025-06-03 17:17:39,761 | INFO     | mean y: 2604460.6242774567
[2025-06-03 19:40:44] 2025-06-03 17:17:39,761 | INFO     | -- intersect: 65112404279.314156
[2025-06-03 19:40:44] 2025-06-03 17:17:39,762 | INFO     | intersect: 65112404279.314156
[2025-06-03 19:40:44] 2025-06-03 17:17:39,762 | INFO     | chi2: 0.15736109693290964
[2025-06-03 19:40:44] 2025-06-03 17:17:39,762 | INFO     | -- intersect: 65112404279.314156
[2025-06-03 19:40:44] 2025-06-03 17:17:39,762 | INFO     | current memory leak: -37.23 B/s (using 173 data points, chi2=0.16)
[2025-06-03 19:40:44] 2025-06-03 17:17:39,763 | INFO     | ..............................
[2025-06-03 19:40:44] 2025-06-03 17:17:39,763 | INFO     | . Timing measurements:
[2025-06-03 19:40:44] 2025-06-03 17:17:39,763 | INFO     | . get job = 0 s
[2025-06-03 19:40:44] 2025-06-03 17:17:39,763 | INFO     | . initial setup = 5 s
[2025-06-03 19:40:44] 2025-06-03 17:17:39,764 | INFO     | . payload setup = 174 s
[2025-06-03 19:40:44] 2025-06-03 17:17:39,764 | INFO     | . stage-in = 0 s
[2025-06-03 19:40:44] 2025-06-03 17:17:39,764 | INFO     | . payload execution = 12882 s
[2025-06-03 19:40:44] 2025-06-03 17:17:39,764 | INFO     | . stage-out = 3 s
[2025-06-03 19:40:44] 2025-06-03 17:17:39,764 | INFO     | . log creation = 1 s
[2025-06-03 19:40:44] 2025-06-03 17:17:39,764 | INFO     | ..............................
[2025-06-03 19:40:44] 2025-06-03 17:17:40,497 | INFO     | 
[2025-06-03 19:40:44] 2025-06-03 17:17:40,497 | INFO     | job summary report
[2025-06-03 19:40:44] 2025-06-03 17:17:40,497 | INFO     | --------------------------------------------------
[2025-06-03 19:40:44] 2025-06-03 17:17:40,497 | INFO     | PanDA job id: 6677440908
[2025-06-03 19:40:44] 2025-06-03 17:17:40,497 | INFO     | task id: 45006595
[2025-06-03 19:40:44] 2025-06-03 17:17:40,498 | INFO     | errors: (none)
[2025-06-03 19:40:44] 2025-06-03 17:17:40,498 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 19:40:44] 2025-06-03 17:17:40,498 | INFO     | pilot state: finished 
[2025-06-03 19:40:44] 2025-06-03 17:17:40,498 | INFO     | transexitcode: 0
[2025-06-03 19:40:44] 2025-06-03 17:17:40,498 | INFO     | exeerrorcode: 0
[2025-06-03 19:40:44] 2025-06-03 17:17:40,498 | INFO     | exeerrordiag: 
[2025-06-03 19:40:44] 2025-06-03 17:17:40,498 | INFO     | exitcode: 0
[2025-06-03 19:40:44] 2025-06-03 17:17:40,498 | INFO     | exitmsg: OK
[2025-06-03 19:40:44] 2025-06-03 17:17:40,498 | INFO     | cpuconsumptiontime: 45919 s
[2025-06-03 19:40:44] 2025-06-03 17:17:40,498 | INFO     | nevents: 400
[2025-06-03 19:40:44] 2025-06-03 17:17:40,498 | INFO     | neventsw: 0
[2025-06-03 19:40:44] 2025-06-03 17:17:40,498 | INFO     | pid: 28422
[2025-06-03 19:40:44] 2025-06-03 17:17:40,499 | INFO     | pgrp: 28422
[2025-06-03 19:40:44] 2025-06-03 17:17:40,499 | INFO     | corecount: 8
[2025-06-03 19:40:44] 2025-06-03 17:17:40,499 | INFO     | event service: False
[2025-06-03 19:40:44] 2025-06-03 17:17:40,499 | INFO     | sizes: {0: 2404354, 1: 2405039, 2: 2405238, 13: 2405238, 23: 2405294, 34: 2405322, 45: 2405478, 56: 2405506, 66: 2405534, 77: 2405562, 88: 2406132, 99: 2406132, 13
[2025-06-03 19:40:44] 2025-06-03 17:17:40,499 | INFO     | --------------------------------------------------
[2025-06-03 19:40:44] 2025-06-03 17:17:40,499 | INFO     | 
[2025-06-03 19:40:44] 2025-06-03 17:17:40,499 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 19:40:44] 2025-06-03 17:17:41,004 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 19:40:44] 2025-06-03 17:17:41,005 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 19:40:44] 2025-06-03 17:17:41,005 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 19:40:44] 2025-06-03 17:17:41,005 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 19:40:44] 2025-06-03 17:17:41,005 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 19:40:44] 2025-06-03 17:17:41,005 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 19:40:44] 2025-06-03 17:17:41,005 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 19:40:44] 2025-06-03 17:17:41,005 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 19:40:44] 2025-06-03 17:17:41,005 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 19:40:44] 2025-06-03 17:17:41,005 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 19:40:44] 2025-06-03 17:17:41,006 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 19:40:44] 2025-06-03 17:17:41,006 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 19:40:44] 2025-06-03 17:17:41,006 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 19:40:44] 2025-06-03 17:17:41,006 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 19:40:44] 2025-06-03 17:17:41,006 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 19:40:44] 2025-06-03 17:17:41,006 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 19:40:44] 2025-06-03 17:17:41,006 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 19:40:44] 2025-06-03 17:17:41,006 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 19:40:44] 2025-06-03 17:17:41,006 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 19:40:44] 2025-06-03 17:17:41,006 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 19:40:44] 2025-06-03 17:17:41,007 | INFO     | job 6677440908 has completed (purged errors)
[2025-06-03 19:40:44] 2025-06-03 17:17:41,007 | INFO     | overall cleanup function is called
[2025-06-03 19:40:44] 2025-06-03 17:17:42,016 | INFO     | --- collectZombieJob: --- 10, [28422]
[2025-06-03 19:40:44] 2025-06-03 17:17:42,016 | INFO     | zombie collector waiting for pid 28422
[2025-06-03 19:40:44] 2025-06-03 17:17:42,016 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 19:40:44] 2025-06-03 17:17:42,016 | INFO     | collected zombie processes
[2025-06-03 19:40:44] 2025-06-03 17:17:42,016 | INFO     | will attempt to kill all subprocesses of pid=28422
[2025-06-03 19:40:44] 2025-06-03 17:17:42,279 | INFO     | PID=21722 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 19:40:44] 2025-06-03 17:17:42,280 | INFO     | .. there are 9 such processes running
[2025-06-03 19:40:44] 2025-06-03 17:17:42,305 | INFO     | process IDs to be killed: [28422] (in reverse order)
[2025-06-03 19:40:44] 2025-06-03 17:17:43,098 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 19:40:44] 2025-06-03 17:17:43,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 19:40:44] 2025-06-03 17:17:43,103 | INFO     | did not find any defunct processes belonging to 28422
[2025-06-03 19:40:44] 2025-06-03 17:17:43,106 | INFO     | did not find any defunct processes belonging to 28422
[2025-06-03 19:40:44] 2025-06-03 17:17:43,106 | INFO     | ready for new job
[2025-06-03 19:40:44] 2025-06-03 17:17:43,107 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 19:40:44] 2025-06-03 17:17:43,109 | INFO     | **************************************
[2025-06-03 19:40:44] 2025-06-03 17:17:43,109 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 19:40:44] 2025-06-03 17:17:43,109 | INFO     | **************************************
[2025-06-03 19:40:44] 2025-06-03 17:17:43,109 | INFO     | 
[2025-06-03 19:40:44] 2025-06-03 17:17:43,110 | INFO     | pilot is running in a VM
[2025-06-03 19:40:44] 2025-06-03 17:17:43,110 | INFO     | architecture information:
[2025-06-03 19:40:44] 2025-06-03 17:17:43,111 | INFO     | executing command: cat /etc/os-release
[2025-06-03 19:40:44] 2025-06-03 17:17:43,398 | INFO     | cat /etc/os-release:
[2025-06-03 19:40:44] NAME="CentOS Linux"
[2025-06-03 19:40:44] VERSION="7 (Core)"
[2025-06-03 19:40:44] ID="centos"
[2025-06-03 19:40:44] ID_LIKE="rhel fedora"
[2025-06-03 19:40:44] VERSION_ID="7"
[2025-06-03 19:40:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 19:40:44] ANSI_COLOR="0;31"
[2025-06-03 19:40:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 19:40:44] HOME_URL="https://www.centos.org/"
[2025-06-03 19:40:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 19:40:44] 
[2025-06-03 19:40:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 19:40:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 19:40:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 19:40:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 19:40:44] 
[2025-06-03 19:40:44] 2025-06-03 17:17:43,399 | INFO     | **************************************
[2025-06-03 19:40:44] 2025-06-03 17:17:43,902 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 19:40:44] 2025-06-03 17:17:44,150 | INFO     | sufficient remaining disk space (496878223360 B)
[2025-06-03 19:40:44] 2025-06-03 17:17:44,151 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 19:40:44] 2025-06-03 17:17:44,151 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 19:40:44] 2025-06-03 17:17:44,151 | INFO     | update_server=False
[2025-06-03 19:40:44] 2025-06-03 17:17:44,151 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 19:40:44] 2025-06-03 17:17:44,151 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:40:44] 2025-06-03 17:17:44,151 | INFO     | aborting loop
[2025-06-03 19:40:44] 2025-06-03 17:17:44,289 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 19:40:44] 2025-06-03 17:17:44,289 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 19:40:44] 2025-06-03 17:17:44,289 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 19:40:44] 2025-06-03 17:17:45,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:40:44] 2025-06-03 17:17:45,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 19:40:44] 2025-06-03 17:17:45,101 | INFO     | all data control threads have been joined
[2025-06-03 19:40:44] 2025-06-03 17:17:45,143 | INFO     | all job control threads have been joined
[2025-06-03 19:40:44] 2025-06-03 17:17:45,157 | INFO     | [job] retrieve thread has finished
[2025-06-03 19:40:44] 2025-06-03 17:17:45,158 | INFO     | [job] job monitor thread has finished
[2025-06-03 19:40:44] 2025-06-03 17:17:45,468 | INFO     | [payload] failed_post thread has finished
[2025-06-03 19:40:44] 2025-06-03 17:17:45,500 | INFO     | all payload control threads have been joined
[2025-06-03 19:40:44] 2025-06-03 17:17:45,537 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 19:40:44] 2025-06-03 17:17:45,552 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 19:40:44] 2025-06-03 17:17:45,798 | INFO     | [data] copytool_in thread has finished
[2025-06-03 19:40:44] 2025-06-03 17:17:45,857 | INFO     | [job] validate thread has finished
[2025-06-03 19:40:44] 2025-06-03 17:17:46,052 | INFO     | [job] queue monitor thread has finished
[2025-06-03 19:40:44] 2025-06-03 17:17:46,107 | INFO     | [data] control thread has finished
[2025-06-03 19:40:44] 2025-06-03 17:17:46,118 | INFO     | [payload] validate_post thread has finished
[2025-06-03 19:40:44] 2025-06-03 17:17:46,149 | INFO     | [job] control thread has finished
[2025-06-03 19:40:44] 2025-06-03 17:17:46,489 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 19:40:44] 2025-06-03 17:17:46,506 | INFO     | [payload] control thread has finished
[2025-06-03 19:40:44] 2025-06-03 17:17:47,069 | INFO     | [data] copytool_out thread has finished
[2025-06-03 19:40:44] 2025-06-03 17:17:47,258 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 19:40:44] 2025-06-03 17:17:51,267 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 19:40:44] 2025-06-03 17:17:54,281 | INFO     | job.realtimelogging is not enabled
[2025-06-03 19:40:44] 2025-06-03 17:17:55,287 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 19:40:44] 2025-06-03 17:17:56,075 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139704588883776)>', '<ExcThread(monitor, started 139704003454720)>']
[2025-06-03 19:40:44] 2025-06-03 17:17:56,361 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 19:40:44] 2025-06-03 17:17:56,361 | INFO     | [monitor] control thread has ended
[2025-06-03 19:40:44] 2025-06-03 17:18:01,100 | INFO     | all workflow threads have been joined
[2025-06-03 19:40:44] 2025-06-03 17:18:01,100 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 19:40:44] 2025-06-03 17:18:01,100 | INFO     | traces error code: 0
[2025-06-03 19:40:44] 2025-06-03 17:18:01,101 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 19:40:44] 2025-06-03 17:18:01,415 [wrapper] ==== pilot stdout END ====
[2025-06-03 19:40:44] 2025-06-03 17:18:01,529 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 19:40:44] 2025-06-03 17:18:01,585 [wrapper] pilotpid: 21722
[2025-06-03 19:40:44] 2025-06-03 17:18:01,679 [wrapper] Pilot exit status: 0
[2025-06-03 19:40:44] 2025-06-03 17:18:02,167 [wrapper] pandaids: 6677440908
[2025-06-03 19:40:44] 2025-06-03 17:18:02,942 [wrapper] cleanup supervisor_pilot  1871 21723
[2025-06-03 19:40:44] 2025-06-03 17:18:03,027 [wrapper] Test setup, not cleaning
[2025-06-03 19:40:44] 2025-06-03 17:18:03,118 [wrapper] apfmon messages muted
[2025-06-03 19:40:44] 2025-06-03 17:18:03,188 [wrapper] ==== wrapper stdout END ====
[2025-06-03 19:40:44] 2025-06-03 17:18:03,231 [wrapper] ==== wrapper stderr END ====
[2025-06-03 19:40:44]  *** Error codes and diagnostics ***
[2025-06-03 19:40:44]     "exeErrorCode": 0,
[2025-06-03 19:40:44]     "exeErrorDiag": "",
[2025-06-03 19:40:44]     "pilotErrorCode": 0,
[2025-06-03 19:40:44]     "pilotErrorDiag": "",
[2025-06-03 19:40:44]  *** Listing of results directory ***
[2025-06-03 19:40:44] total 391892
[2025-06-03 19:40:44] -rw-r--r--. 1 boinc boinc    495897 Jun  3 02:37 pilot3.tar.gz
[2025-06-03 19:40:44] -rwx------. 1 boinc boinc     37140 Jun  3 02:38 runpilot2-wrapper.sh
[2025-06-03 19:40:44] -rw-r--r--. 1 boinc boinc      5111 Jun  3 02:38 queuedata.json
[2025-06-03 19:40:44] -rw-r--r--. 1 boinc boinc       100 Jun  3 15:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 19:40:44] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 15:22 run_atlas
[2025-06-03 19:40:44] -rw-r--r--. 1 boinc boinc       105 Jun  3 15:22 job.xml
[2025-06-03 19:40:44] -rw-r--r--. 2 boinc boinc 214947949 Jun  3 15:22 EVNT.45006593._000616.pool.root.1
[2025-06-03 19:40:44] -rw-r--r--. 1 boinc boinc      6392 Jun  3 15:22 init_data.xml
[2025-06-03 19:40:44] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:22 start_atlas.sh
[2025-06-03 19:40:44] drwxrwx--x. 2 boinc boinc        68 Jun  3 15:22 shared
[2025-06-03 19:40:44] -rw-r--r--. 2 boinc boinc    508872 Jun  3 15:22 input.tar.gz
[2025-06-03 19:40:44] -rw-r--r--. 1 boinc boinc         0 Jun  3 15:22 boinc_lockfile
[2025-06-03 19:40:44] -rw-r--r--. 1 boinc boinc      2524 Jun  3 15:32 pandaJob.out
[2025-06-03 19:40:44] -rw-------. 1 boinc boinc    982724 Jun  3 15:35 agis_schedconf.cvmfs.json
[2025-06-03 19:40:44] drwx------. 4 boinc boinc      4096 Jun  3 15:35 pilot3
[2025-06-03 19:40:44] -rw-------. 1 boinc boinc 179497778 Jun  3 19:14 HITS.45006595._015388.pool.root.1
[2025-06-03 19:40:44] -rw-r--r--. 1 boinc boinc       531 Jun  3 19:14 boinc_task_state.xml
[2025-06-03 19:40:44] -rw-------. 1 boinc boinc      1018 Jun  3 19:15 memory_monitor_summary.json
[2025-06-03 19:40:44] -rw-------. 1 boinc boinc   1603667 Jun  3 19:15 agis_ddmendpoints.agis.ALL.json
[2025-06-03 19:40:44] -rw-------. 1 boinc boinc    373821 Jun  3 19:15 log.45006595._015388.job.log.tgz.1
[2025-06-03 19:40:44] -rw-------. 1 boinc boinc        95 Jun  3 19:17 pilot_heartbeat.json
[2025-06-03 19:40:44] -rw-------. 1 boinc boinc      7696 Jun  3 19:17 heartbeat.json
[2025-06-03 19:40:44] -rw-------. 1 boinc boinc      4488 Jun  3 19:18 pilotlog.txt
[2025-06-03 19:40:44] -rw-------. 1 boinc boinc   1144697 Jun  3 19:18 log.45006595._015388.job.log.1
[2025-06-03 19:40:44] -rw-------. 1 boinc boinc       357 Jun  3 19:18 output.list
[2025-06-03 19:40:44] -rw-r--r--. 1 boinc boinc       620 Jun  3 19:18 runtime_log
[2025-06-03 19:40:44] -rw-------. 1 boinc boinc   1536000 Jun  3 19:18 result.tar.gz
[2025-06-03 19:40:44] -rw-------. 1 boinc boinc       656 Jun  3 19:18 TxFODmVqUg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFzWKDmffhNrm.diag
[2025-06-03 19:40:44] -rw-r--r--. 1 boinc boinc      8659 Jun  3 19:18 runtime_log.err
[2025-06-03 19:40:44] -rw-r--r--. 1 boinc boinc      8192 Jun  3 19:40 boinc_mmap_file
[2025-06-03 19:40:44] -rw-r--r--. 1 boinc boinc        28 Jun  3 19:40 wrapper_checkpoint.txt
[2025-06-03 19:40:44] -rw-r--r--. 1 boinc boinc     20564 Jun  3 19:40 stderr.txt
[2025-06-03 19:40:44] HITS file was successfully produced:
[2025-06-03 19:40:44] -rw-------. 1 boinc boinc 179497778 Jun  3 19:14 shared/HITS.pool.root.1
[2025-06-03 19:40:44]  *** Contents of shared directory: ***
[2025-06-03 19:40:44] total 387220
[2025-06-03 19:40:44] -rw-r--r--. 2 boinc boinc 214947949 Jun  3 15:22 ATLAS.root_0
[2025-06-03 19:40:44] -rw-r--r--. 2 boinc boinc     15093 Jun  3 15:22 start_atlas.sh
[2025-06-03 19:40:44] -rw-r--r--. 2 boinc boinc    508872 Jun  3 15:22 input.tar.gz
[2025-06-03 19:40:44] -rw-------. 1 boinc boinc 179497778 Jun  3 19:14 HITS.pool.root.1
[2025-06-03 19:40:44] -rw-------. 1 boinc boinc   1536000 Jun  3 19:18 result.tar.gz
19:40:46 (9719): run_atlas exited; CPU time 46085.624317
19:40:46 (9719): called boinc_finish(0)

</stderr_txt>
]]>

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