Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
11:53:41 (1041038): wrapper (7.7.26015): starting
11:53:41 (1041038): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 11:53:41] Arguments: --nthreads 4
[2025-06-04 11:53:41] Threads: 4
[2025-06-04 11:53:41] Checking for CVMFS
[2025-06-04 11:53:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:53:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:53:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:53:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:53:42] 2.12.7.0 2709 2346 57896 146775 3 56 4087895 6144000 911 130560 0 2914706 99.994 597210 11676 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-06-04 11:53:42] CVMFS is ok
[2025-06-04 11:53:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:53:42] Checking for apptainer binary...
[2025-06-04 11:53:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:53:42] Running /usr/bin/apptainer --version
[2025-06-04 11:53:42] apptainer version 1.4.0
[2025-06-04 11:53:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:53:42] TS-P310
[2025-06-04 11:53:42] apptainer works
[2025-06-04 11:53:42] Set ATHENA_PROC_NUMBER=4
[2025-06-04 11:53:42] Set ATHENA_CORE_NUMBER=4
[2025-06-04 11:53:42] Starting ATLAS job with PandaID=6677440541
[2025-06-04 11:53:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:50:02]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:50:02] 2025-06-04 11:49:45,918 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6677440541/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:50:02] 2025-06-04 11:49:45,981 | INFO     | number of running child processes to parent process 1051115: 1
[2025-06-04 13:50:02] 2025-06-04 11:49:45,981 | INFO     | maximum number of monitored processes: 6
[2025-06-04 13:50:02] 2025-06-04 11:49:48,483 | INFO     | monitor loop #526: job 0:6677440541 is in state 'finished'
[2025-06-04 13:50:02] 2025-06-04 11:49:48,484 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:50:02] 2025-06-04 11:49:48,569 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 13:50:02] 2025-06-04 11:49:48,569 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6677440541/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:50:02] 2025-06-04 11:49:48,569 | INFO     | extracted standard info from prmon json
[2025-06-04 13:50:02] 2025-06-04 11:49:48,570 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:50:02] 2025-06-04 11:49:48,570 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:50:02] 2025-06-04 11:49:48,570 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:50:02] 2025-06-04 11:49:48,570 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:50:02] 2025-06-04 11:49:48,572 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:50:02] 2025-06-04 11:49:48,572 | INFO     | sum of square deviations: 459366752.5
[2025-06-04 13:50:02] 2025-06-04 11:49:48,572 | INFO     | sum of deviations: -6746134112.499998
[2025-06-04 13:50:02] 2025-06-04 11:49:48,573 | INFO     | mean x: 1749034294.5
[2025-06-04 13:50:02] 2025-06-04 11:49:48,573 | INFO     | mean y: 2403545.236842105
[2025-06-04 13:50:02] 2025-06-04 11:49:48,573 | INFO     | -- intersect: 25688241394.50265
[2025-06-04 13:50:02] 2025-06-04 11:49:48,573 | INFO     | intersect: 25688241394.50265
[2025-06-04 13:50:02] 2025-06-04 11:49:48,573 | INFO     | chi2: 1.453462750156237
[2025-06-04 13:50:02] 2025-06-04 11:49:48,573 | INFO     | sum of square deviations: 401533110.0
[2025-06-04 13:50:02] 2025-06-04 11:49:48,574 | INFO     | sum of deviations: -5964497528.000002
[2025-06-04 13:50:02] 2025-06-04 11:49:48,574 | INFO     | mean x: 1749034142.0
[2025-06-04 13:50:02] 2025-06-04 11:49:48,574 | INFO     | mean y: 2405607.642201835
[2025-06-04 13:50:02] 2025-06-04 11:49:48,574 | INFO     | -- intersect: 25983101984.95117
[2025-06-04 13:50:02] 2025-06-04 11:49:48,574 | INFO     | intersect: 25983101984.95117
[2025-06-04 13:50:02] 2025-06-04 11:49:48,574 | INFO     | chi2: 1.4530208042149435
[2025-06-04 13:50:02] 2025-06-04 11:49:48,574 | INFO     | current chi2=1.4530208042149435 (change=0.030406416762034334 %)
[2025-06-04 13:50:02] 2025-06-04 11:49:48,574 | INFO     | right removable region: 108
[2025-06-04 13:50:02] 2025-06-04 11:49:48,574 | INFO     | sum of square deviations: 401533110.0
[2025-06-04 13:50:02] 2025-06-04 11:49:48,575 | INFO     | sum of deviations: -18952314236.0
[2025-06-04 13:50:02] 2025-06-04 11:49:48,575 | INFO     | mean x: 1749034447.0
[2025-06-04 13:50:02] 2025-06-04 11:49:48,575 | INFO     | mean y: 2434712.660550459
[2025-06-04 13:50:02] 2025-06-04 11:49:48,575 | INFO     | -- intersect: 82556649106.41873
[2025-06-04 13:50:02] 2025-06-04 11:49:48,575 | INFO     | intersect: 82556649106.41873
[2025-06-04 13:50:02] 2025-06-04 11:49:48,575 | INFO     | chi2: 0.1150384252207473
[2025-06-04 13:50:02] 2025-06-04 11:49:48,575 | INFO     | current chi2=0.1150384252207473 (change=92.08521682386552 %)
[2025-06-04 13:50:02] 2025-06-04 11:49:48,575 | INFO     | sum of square deviations: 348769330.0
[2025-06-04 13:50:02] 2025-06-04 11:49:48,576 | INFO     | sum of deviations: -13943751734.000002
[2025-06-04 13:50:02] 2025-06-04 11:49:48,576 | INFO     | mean x: 1749034599.5
[2025-06-04 13:50:02] 2025-06-04 11:49:48,576 | INFO     | mean y: 2420211.269230769
[2025-06-04 13:50:02] 2025-06-04 11:49:48,576 | INFO     | -- intersect: 69928592416.8474
[2025-06-04 13:50:02] 2025-06-04 11:49:48,576 | INFO     | intersect: 69928592416.8474
[2025-06-04 13:50:02] 2025-06-04 11:49:48,576 | INFO     | chi2: 0.09349672160786905
[2025-06-04 13:50:02] 2025-06-04 11:49:48,576 | INFO     | current chi2=0.09349672160786905 (change=18.725659336471146 %)
[2025-06-04 13:50:02] 2025-06-04 11:49:48,576 | INFO     | left removable region: 20
[2025-06-04 13:50:02] 2025-06-04 11:49:48,577 | INFO     | sum of square deviations: 211285822.0
[2025-06-04 13:50:02] 2025-06-04 11:49:48,577 | INFO     | sum of deviations: -6303674181.000002
[2025-06-04 13:50:02] 2025-06-04 11:49:48,577 | INFO     | mean x: 1749034721.5
[2025-06-04 13:50:02] 2025-06-04 11:49:48,577 | INFO     | mean y: 2399795.659090909
[2025-06-04 13:50:02] 2025-06-04 11:49:48,577 | INFO     | -- intersect: 52184533510.20657
[2025-06-04 13:50:02] 2025-06-04 11:49:48,577 | INFO     | intersect: 52184533510.20657
[2025-06-04 13:50:02] 2025-06-04 11:49:48,577 | INFO     | chi2: 0.06112541485919208
[2025-06-04 13:50:02] 2025-06-04 11:49:48,577 | INFO     | -- intersect: 52184533510.20657
[2025-06-04 13:50:02] 2025-06-04 11:49:48,578 | INFO     | current memory leak: -29.83 B/s (using 88 data points, chi2=0.06)
[2025-06-04 13:50:02] 2025-06-04 11:49:48,578 | INFO     | ..............................
[2025-06-04 13:50:02] 2025-06-04 11:49:48,578 | INFO     | . Timing measurements:
[2025-06-04 13:50:02] 2025-06-04 11:49:48,578 | INFO     | . get job = 0 s
[2025-06-04 13:50:02] 2025-06-04 11:49:48,578 | INFO     | . initial setup = 1 s
[2025-06-04 13:50:02] 2025-06-04 11:49:48,578 | INFO     | . payload setup = 4 s
[2025-06-04 13:50:02] 2025-06-04 11:49:48,578 | INFO     | . stage-in = 0 s
[2025-06-04 13:50:02] 2025-06-04 11:49:48,578 | INFO     | . payload execution = 6931 s
[2025-06-04 13:50:02] 2025-06-04 11:49:48,578 | INFO     | . stage-out = 0 s
[2025-06-04 13:50:02] 2025-06-04 11:49:48,578 | INFO     | . log creation = 0 s
[2025-06-04 13:50:02] 2025-06-04 11:49:48,578 | INFO     | ..............................
[2025-06-04 13:50:02] 2025-06-04 11:49:48,986 | INFO     | 
[2025-06-04 13:50:02] 2025-06-04 11:49:48,986 | INFO     | job summary report
[2025-06-04 13:50:02] 2025-06-04 11:49:48,986 | INFO     | --------------------------------------------------
[2025-06-04 13:50:02] 2025-06-04 11:49:48,986 | INFO     | PanDA job id: 6677440541
[2025-06-04 13:50:02] 2025-06-04 11:49:48,987 | INFO     | task id: 45006595
[2025-06-04 13:50:02] 2025-06-04 11:49:48,987 | INFO     | errors: (none)
[2025-06-04 13:50:02] 2025-06-04 11:49:48,987 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:50:02] 2025-06-04 11:49:48,987 | INFO     | pilot state: finished 
[2025-06-04 13:50:02] 2025-06-04 11:49:48,987 | INFO     | transexitcode: 0
[2025-06-04 13:50:02] 2025-06-04 11:49:48,987 | INFO     | exeerrorcode: 0
[2025-06-04 13:50:02] 2025-06-04 11:49:48,987 | INFO     | exeerrordiag: 
[2025-06-04 13:50:02] 2025-06-04 11:49:48,987 | INFO     | exitcode: 0
[2025-06-04 13:50:02] 2025-06-04 11:49:48,987 | INFO     | exitmsg: OK
[2025-06-04 13:50:02] 2025-06-04 11:49:48,987 | INFO     | cpuconsumptiontime: 26523 s
[2025-06-04 13:50:02] 2025-06-04 11:49:48,987 | INFO     | nevents: 400
[2025-06-04 13:50:02] 2025-06-04 11:49:48,987 | INFO     | neventsw: 0
[2025-06-04 13:50:02] 2025-06-04 11:49:48,987 | INFO     | pid: 1051115
[2025-06-04 13:50:02] 2025-06-04 11:49:48,987 | INFO     | pgrp: 1051115
[2025-06-04 13:50:02] 2025-06-04 11:49:48,987 | INFO     | corecount: 4
[2025-06-04 13:50:02] 2025-06-04 11:49:48,987 | INFO     | event service: False
[2025-06-04 13:50:02] 2025-06-04 11:49:48,988 | INFO     | sizes: {0: 2405012, 1: 2405211, 3: 2405417, 11: 2405445, 6939: 2432590, 6941: 2441717, 6947: 2441831}
[2025-06-04 13:50:02] 2025-06-04 11:49:48,988 | INFO     | --------------------------------------------------
[2025-06-04 13:50:02] 2025-06-04 11:49:48,988 | INFO     | 
[2025-06-04 13:50:02] 2025-06-04 11:49:48,988 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2025-06-04 13:50:02] 2025-06-04 11:49:49,000 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:50:02] 2025-06-04 11:49:49,000 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:50:02] 2025-06-04 11:49:49,001 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:50:02] 2025-06-04 11:49:49,001 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:50:02] 2025-06-04 11:49:49,001 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:50:02] 2025-06-04 11:49:49,001 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:50:02] 2025-06-04 11:49:49,001 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:50:02] 2025-06-04 11:49:49,001 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:50:02] 2025-06-04 11:49:49,001 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:50:02] 2025-06-04 11:49:49,001 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:50:02] 2025-06-04 11:49:49,001 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:50:02] 2025-06-04 11:49:49,001 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:50:02] 2025-06-04 11:49:49,001 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:50:02] 2025-06-04 11:49:49,001 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:50:02] 2025-06-04 11:49:49,001 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:50:02] 2025-06-04 11:49:49,001 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:50:02] 2025-06-04 11:49:49,001 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:50:02] 2025-06-04 11:49:49,002 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:50:02] 2025-06-04 11:49:49,002 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:50:02] 2025-06-04 11:49:49,002 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:50:02] 2025-06-04 11:49:49,002 | INFO     | job 6677440541 has completed (purged errors)
[2025-06-04 13:50:02] 2025-06-04 11:49:49,002 | INFO     | overall cleanup function is called
[2025-06-04 13:50:02] 2025-06-04 11:49:50,009 | INFO     | --- collectZombieJob: --- 10, [1051115]
[2025-06-04 13:50:02] 2025-06-04 11:49:50,009 | INFO     | zombie collector waiting for pid 1051115
[2025-06-04 13:50:02] 2025-06-04 11:49:50,009 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:50:02] 2025-06-04 11:49:50,009 | INFO     | collected zombie processes
[2025-06-04 13:50:02] 2025-06-04 11:49:50,009 | INFO     | will attempt to kill all subprocesses of pid=1051115
[2025-06-04 13:50:02] 2025-06-04 11:49:50,074 | INFO     | process IDs to be killed: [1051115] (in reverse order)
[2025-06-04 13:50:02] 2025-06-04 11:49:50,100 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:50:02] 2025-06-04 11:49:50,101 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:50:02] 2025-06-04 11:49:50,103 | INFO     | did not find any defunct processes belonging to 1051115
[2025-06-04 13:50:02] 2025-06-04 11:49:50,104 | INFO     | did not find any defunct processes belonging to 1051115
[2025-06-04 13:50:02] 2025-06-04 11:49:50,105 | INFO     | ready for new job
[2025-06-04 13:50:02] 2025-06-04 11:49:50,105 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:50:02] 2025-06-04 11:49:50,106 | INFO     | **************************************
[2025-06-04 13:50:02] 2025-06-04 11:49:50,106 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:50:02] 2025-06-04 11:49:50,106 | INFO     | **************************************
[2025-06-04 13:50:02] 2025-06-04 11:49:50,106 | INFO     | 
[2025-06-04 13:50:02] 2025-06-04 11:49:50,106 | INFO     | architecture information:
[2025-06-04 13:50:02] 2025-06-04 11:49:50,107 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:50:02] 2025-06-04 11:49:50,115 | INFO     | cat /etc/os-release:
[2025-06-04 13:50:02] NAME="CentOS Linux"
[2025-06-04 13:50:02] VERSION="7 (Core)"
[2025-06-04 13:50:02] ID="centos"
[2025-06-04 13:50:02] ID_LIKE="rhel fedora"
[2025-06-04 13:50:02] VERSION_ID="7"
[2025-06-04 13:50:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:50:02] ANSI_COLOR="0;31"
[2025-06-04 13:50:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:50:02] HOME_URL="https://www.centos.org/"
[2025-06-04 13:50:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:50:02] 
[2025-06-04 13:50:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:50:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:50:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:50:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:50:02] 
[2025-06-04 13:50:02] 2025-06-04 11:49:50,115 | INFO     | **************************************
[2025-06-04 13:50:02] 2025-06-04 11:49:50,618 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2025-06-04 13:50:02] 2025-06-04 11:49:50,627 | INFO     | sufficient remaining disk space (89937412096 B)
[2025-06-04 13:50:02] 2025-06-04 11:49:50,627 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:50:02] 2025-06-04 11:49:50,628 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:50:02] 2025-06-04 11:49:50,628 | INFO     | update_server=False
[2025-06-04 13:50:02] 2025-06-04 11:49:50,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:50:02] 2025-06-04 11:49:50,628 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:50:02] 2025-06-04 11:49:50,628 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:50:02] 2025-06-04 11:49:50,628 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 13:50:02] 2025-06-04 11:49:50,629 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:50:02] 2025-06-04 11:49:50,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:50:02] 2025-06-04 11:49:50,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:50:02] 2025-06-04 11:49:50,857 | INFO     | all job control threads have been joined
[2025-06-04 13:50:02] 2025-06-04 11:49:50,987 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 13:50:02] 2025-06-04 11:49:50,987 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 13:50:02] 2025-06-04 11:49:50,987 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:50:02] 2025-06-04 11:49:50,987 | INFO     | will abort loop
[2025-06-04 13:50:02] 2025-06-04 11:49:51,070 | INFO     | all data control threads have been joined
[2025-06-04 13:50:02] 2025-06-04 11:49:51,157 | INFO     | all payload control threads have been joined
[2025-06-04 13:50:02] 2025-06-04 11:49:51,630 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:50:02] 2025-06-04 11:49:51,631 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:50:02] 2025-06-04 11:49:51,797 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:50:02] 2025-06-04 11:49:51,807 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:50:02] 2025-06-04 11:49:51,862 | INFO     | [job] control thread has finished
[2025-06-04 13:50:02] 2025-06-04 11:49:51,990 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:50:02] 2025-06-04 11:49:52,004 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:50:02] 2025-06-04 11:49:52,075 | INFO     | [data] control thread has finished
[2025-06-04 13:50:02] 2025-06-04 11:49:52,160 | INFO     | [payload] control thread has finished
[2025-06-04 13:50:02] 2025-06-04 11:49:52,623 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:50:02] 2025-06-04 11:49:52,633 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:50:02] 2025-06-04 11:49:52,812 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:50:02] 2025-06-04 11:49:52,893 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:50:02] 2025-06-04 11:49:53,058 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:50:02] 2025-06-04 11:49:53,090 | INFO     | [job] validate thread has finished
[2025-06-04 13:50:02] 2025-06-04 11:49:53,097 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:50:02] 2025-06-04 11:49:56,899 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:50:02] 2025-06-04 11:49:57,388 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134718162929472)>', '<ExcThread(monitor, started 134717655463680)>']
[2025-06-04 13:50:02] 2025-06-04 11:49:57,657 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:50:02] 2025-06-04 11:49:57,657 | INFO     | [monitor] control thread has ended
[2025-06-04 13:50:02] 2025-06-04 11:50:02,404 | INFO     | all workflow threads have been joined
[2025-06-04 13:50:02] 2025-06-04 11:50:02,404 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:50:02] 2025-06-04 11:50:02,404 | INFO     | traces error code: 0
[2025-06-04 13:50:02] 2025-06-04 11:50:02,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:50:02] 2025-06-04 11:50:02,484 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:50:02] 2025-06-04 11:50:02,485 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:50:02] 2025-06-04 11:50:02,487 [wrapper] pilotpid: 1044651
[2025-06-04 13:50:02] 2025-06-04 11:50:02,489 [wrapper] Pilot exit status: 0
[2025-06-04 13:50:02] 2025-06-04 11:50:02,495 [wrapper] pandaids: 6677440541
[2025-06-04 13:50:02] 2025-06-04 11:50:02,513 [wrapper] cleanup supervisor_pilot 1089944 1044652
[2025-06-04 13:50:02] 2025-06-04 11:50:02,514 [wrapper] Test setup, not cleaning
[2025-06-04 13:50:02] 2025-06-04 11:50:02,516 [wrapper] apfmon messages muted
[2025-06-04 13:50:02] 2025-06-04 11:50:02,518 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:50:02] 2025-06-04 11:50:02,520 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:50:02]  *** Error codes and diagnostics ***
[2025-06-04 13:50:02]     "exeErrorCode": 0,
[2025-06-04 13:50:02]     "exeErrorDiag": "",
[2025-06-04 13:50:02]     "pilotErrorCode": 0,
[2025-06-04 13:50:02]     "pilotErrorDiag": "",
[2025-06-04 13:50:02]  *** Listing of results directory ***
[2025-06-04 13:50:02] insgesamt 390772
[2025-06-04 13:50:02] -rw-r--r-- 1 boinc boinc      5111  3. Jun 02:35 queuedata.json
[2025-06-04 13:50:02] -rw-r--r-- 1 boinc boinc    495897  3. Jun 02:37 pilot3.tar.gz
[2025-06-04 13:50:02] -rwx------ 1 boinc boinc     37140  3. Jun 02:38 runpilot2-wrapper.sh
[2025-06-04 13:50:02] -rw-r--r-- 1 boinc boinc       100  4. Jun 11:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:50:02] -rwxr-xr-x 1 boinc boinc      7986  4. Jun 11:53 run_atlas
[2025-06-04 13:50:02] -rw-r--r-- 1 boinc boinc       105  4. Jun 11:53 job.xml
[2025-06-04 13:50:02] -rw-r--r-- 1 boinc boinc      6726  4. Jun 11:53 init_data.xml
[2025-06-04 13:50:02] -rw-r--r-- 2 boinc boinc 217753164  4. Jun 11:53 EVNT.45006593._000614.pool.root.1
[2025-06-04 13:50:02] drwxrwx--x 2 boinc boinc      4096  4. Jun 11:53 shared
[2025-06-04 13:50:02] -rw-r--r-- 2 boinc boinc    508878  4. Jun 11:53 input.tar.gz
[2025-06-04 13:50:02] -rw-r--r-- 2 boinc boinc     15093  4. Jun 11:53 start_atlas.sh
[2025-06-04 13:50:02] -rw-r--r-- 1 boinc boinc         0  4. Jun 11:53 boinc_lockfile
[2025-06-04 13:50:02] -rw-r--r-- 1 boinc boinc      2524  4. Jun 11:53 pandaJob.out
[2025-06-04 13:50:02] -rw------- 1 boinc boinc    986766  4. Jun 11:53 agis_schedconf.cvmfs.json
[2025-06-04 13:50:02] -rw------- 1 boinc boinc   1603667  4. Jun 11:53 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:50:02] drwx------ 4 boinc boinc      4096  4. Jun 11:53 pilot3
[2025-06-04 13:50:02] -rw------- 1 boinc boinc 176674699  4. Jun 13:49 HITS.45006595._015346.pool.root.1
[2025-06-04 13:50:02] -rw-r--r-- 1 boinc boinc       529  4. Jun 13:49 boinc_task_state.xml
[2025-06-04 13:50:02] -rw------- 1 boinc boinc      1032  4. Jun 13:49 memory_monitor_summary.json
[2025-06-04 13:50:02] -rw------- 1 boinc boinc    268713  4. Jun 13:49 log.45006595._015346.job.log.tgz.1
[2025-06-04 13:50:02] -rw------- 1 boinc boinc        95  4. Jun 13:49 pilot_heartbeat.json
[2025-06-04 13:50:02] -rw------- 1 boinc boinc      7654  4. Jun 13:49 heartbeat.json
[2025-06-04 13:50:02] -rw-r--r-- 1 boinc boinc      8192  4. Jun 13:49 boinc_mmap_file
[2025-06-04 13:50:02] -rw-r--r-- 1 boinc boinc        27  4. Jun 13:49 wrapper_checkpoint.txt
[2025-06-04 13:50:02] -rw------- 1 boinc boinc      4663  4. Jun 13:50 pilotlog.txt
[2025-06-04 13:50:02] -rw------- 1 boinc boinc    676538  4. Jun 13:50 log.45006595._015346.job.log.1
[2025-06-04 13:50:02] -rw------- 1 boinc boinc       357  4. Jun 13:50 output.list
[2025-06-04 13:50:02] -rw-r--r-- 1 boinc boinc       620  4. Jun 13:50 runtime_log
[2025-06-04 13:50:02] -rw------- 1 boinc boinc    962560  4. Jun 13:50 result.tar.gz
[2025-06-04 13:50:02] -rw-r--r-- 1 boinc boinc      8641  4. Jun 13:50 runtime_log.err
[2025-06-04 13:50:02] -rw------- 1 boinc boinc       644  4. Jun 13:50 fYuKDmPqUg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoHhKDmly5Zwn.diag
[2025-06-04 13:50:02] -rw-r--r-- 1 boinc boinc     20740  4. Jun 13:50 stderr.txt
[2025-06-04 13:50:02] HITS file was successfully produced:
[2025-06-04 13:50:02] -rw------- 1 boinc boinc 176674699  4. Jun 13:49 shared/HITS.pool.root.1
[2025-06-04 13:50:02]  *** Contents of shared directory: ***
[2025-06-04 13:50:02] insgesamt 386648
[2025-06-04 13:50:02] -rw-r--r-- 2 boinc boinc 217753164  4. Jun 11:53 ATLAS.root_0
[2025-06-04 13:50:02] -rw-r--r-- 2 boinc boinc    508878  4. Jun 11:53 input.tar.gz
[2025-06-04 13:50:02] -rw-r--r-- 2 boinc boinc     15093  4. Jun 11:53 start_atlas.sh
[2025-06-04 13:50:02] -rw------- 1 boinc boinc 176674699  4. Jun 13:49 HITS.pool.root.1
[2025-06-04 13:50:02] -rw------- 1 boinc boinc    962560  4. Jun 13:50 result.tar.gz
13:50:03 (1041038): run_atlas exited; CPU time 26590.143877
13:50:03 (1041038): called boinc_finish(0)

</stderr_txt>
]]>

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