Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:12:40 (31295): wrapper (7.7.26015): starting
14:12:40 (31295): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:12:40] Arguments: --nthreads 8
[2025-06-03 14:12:40] Threads: 8
[2025-06-03 14:12:40] Checking for CVMFS
[2025-06-03 14:12:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:12:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:12:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:12:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:12:42] 2.11.2.0 20313 31934 93404 146741 2 154 20977513 25165824 3336 130560 0 16501359 99.790 18973411 5251 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 14:12:42] CVMFS is ok
[2025-06-03 14:12:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:12:42] Checking for apptainer binary...
[2025-06-03 14:12:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:12:42] Running /usr/bin/apptainer --version
[2025-06-03 14:12:42] apptainer version 1.3.2-1.el7
[2025-06-03 14:12:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:12:44] cg-vwn236.simple-grid.lan
[2025-06-03 14:12:44] apptainer works
[2025-06-03 14:12:44] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:12:44] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:12:44] Starting ATLAS job with PandaID=6677440480
[2025-06-03 14:12:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:06:28]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:06:28] 2025-06-03 16:06:00,388 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6677440480/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:06:28] 2025-06-03 16:06:00,388 | INFO     | extracted standard info from prmon json
[2025-06-03 18:06:28] 2025-06-03 16:06:00,388 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:06:28] 2025-06-03 16:06:00,389 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:06:28] 2025-06-03 16:06:00,389 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:06:28] 2025-06-03 16:06:00,389 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:06:28] 2025-06-03 16:06:00,394 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:06:28] 2025-06-03 16:06:00,395 | INFO     | sum of square deviations: 3627000098.0
[2025-06-03 18:06:28] 2025-06-03 16:06:00,396 | INFO     | sum of deviations: -50335078481.000015
[2025-06-03 18:06:28] 2025-06-03 16:06:00,397 | INFO     | mean x: 1748959736.0
[2025-06-03 18:06:28] 2025-06-03 16:06:00,397 | INFO     | mean y: 2529988.088105727
[2025-06-03 18:06:28] 2025-06-03 16:06:00,397 | INFO     | -- intersect: 24274386396.422028
[2025-06-03 18:06:28] 2025-06-03 16:06:00,397 | INFO     | intersect: 24274386396.422028
[2025-06-03 18:06:28] 2025-06-03 16:06:00,397 | INFO     | chi2: 2.932103938003311
[2025-06-03 18:06:28] 2025-06-03 16:06:00,398 | INFO     | sum of square deviations: 3392567795.5
[2025-06-03 18:06:28] 2025-06-03 16:06:00,408 | INFO     | sum of deviations: -32584182699.500008
[2025-06-03 18:06:28] 2025-06-03 16:06:00,408 | INFO     | mean x: 1748959583.5
[2025-06-03 18:06:28] 2025-06-03 16:06:00,408 | INFO     | mean y: 2541351.2117117117
[2025-06-03 18:06:28] 2025-06-03 16:06:00,408 | INFO     | -- intersect: 16800560444.12314
[2025-06-03 18:06:28] 2025-06-03 16:06:00,409 | INFO     | intersect: 16800560444.12314
[2025-06-03 18:06:28] 2025-06-03 16:06:00,409 | INFO     | chi2: 2.0664275160607413
[2025-06-03 18:06:28] 2025-06-03 16:06:00,409 | INFO     | current chi2=2.0664275160607413 (change=29.524070095962347 %)
[2025-06-03 18:06:28] 2025-06-03 16:06:00,410 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 18:06:28] 2025-06-03 16:06:00,411 | INFO     | sum of deviations: -30968672760.000015
[2025-06-03 18:06:28] 2025-06-03 16:06:00,411 | INFO     | mean x: 1748959431.0
[2025-06-03 18:06:28] 2025-06-03 16:06:00,412 | INFO     | mean y: 2542450.709677419
[2025-06-03 18:06:28] 2025-06-03 16:06:00,412 | INFO     | -- intersect: 17096944972.266657
[2025-06-03 18:06:28] 2025-06-03 16:06:00,412 | INFO     | intersect: 17096944972.266657
[2025-06-03 18:06:28] 2025-06-03 16:06:00,412 | INFO     | chi2: 2.0651307004923263
[2025-06-03 18:06:28] 2025-06-03 16:06:00,412 | INFO     | current chi2=2.0651307004923263 (change=0.06275640245476045 %)
[2025-06-03 18:06:28] 2025-06-03 16:06:00,412 | INFO     | right removable region: 216
[2025-06-03 18:06:28] 2025-06-03 16:06:00,413 | INFO     | sum of square deviations: 3392567795.5
[2025-06-03 18:06:28] 2025-06-03 16:06:00,415 | INFO     | sum of deviations: -92723092059.5
[2025-06-03 18:06:28] 2025-06-03 16:06:00,415 | INFO     | mean x: 1748959888.5
[2025-06-03 18:06:28] 2025-06-03 16:06:00,415 | INFO     | mean y: 2557348.9414414414
[2025-06-03 18:06:28] 2025-06-03 16:06:00,415 | INFO     | -- intersect: 47803803639.39553
[2025-06-03 18:06:28] 2025-06-03 16:06:00,415 | INFO     | intersect: 47803803639.39553
[2025-06-03 18:06:28] 2025-06-03 16:06:00,415 | INFO     | chi2: 1.1457597596375164
[2025-06-03 18:06:28] 2025-06-03 16:06:00,416 | INFO     | current chi2=1.1457597596375164 (change=60.92363081720254 %)
[2025-06-03 18:06:28] 2025-06-03 16:06:00,416 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 18:06:28] 2025-06-03 16:06:00,418 | INFO     | sum of deviations: -93900674154.0
[2025-06-03 18:06:28] 2025-06-03 16:06:00,418 | INFO     | mean x: 1748960041.0
[2025-06-03 18:06:28] 2025-06-03 16:06:00,418 | INFO     | mean y: 2558115.4239631337
[2025-06-03 18:06:28] 2025-06-03 16:06:00,418 | INFO     | -- intersect: 51834824009.57896
[2025-06-03 18:06:28] 2025-06-03 16:06:00,418 | INFO     | intersect: 51834824009.57896
[2025-06-03 18:06:28] 2025-06-03 16:06:00,419 | INFO     | chi2: 1.107067590533966
[2025-06-03 18:06:28] 2025-06-03 16:06:00,419 | INFO     | current chi2=1.107067590533966 (change=3.37698795738746 %)
[2025-06-03 18:06:28] 2025-06-03 16:06:00,419 | INFO     | left removable region: 20
[2025-06-03 18:06:28] 2025-06-03 16:06:00,419 | INFO     | sum of square deviations: 2334722845.0
[2025-06-03 18:06:28] 2025-06-03 16:06:00,421 | INFO     | sum of deviations: -63050894755.49999
[2025-06-03 18:06:28] 2025-06-03 16:06:00,421 | INFO     | mean x: 1748960010.5
[2025-06-03 18:06:28] 2025-06-03 16:06:00,421 | INFO     | mean y: 2564822.0153061226
[2025-06-03 18:06:28] 2025-06-03 16:06:00,421 | INFO     | -- intersect: 47234506630.34316
[2025-06-03 18:06:28] 2025-06-03 16:06:00,421 | INFO     | intersect: 47234506630.34316
[2025-06-03 18:06:28] 2025-06-03 16:06:00,422 | INFO     | chi2: 0.19888815043467295
[2025-06-03 18:06:28] 2025-06-03 16:06:00,422 | INFO     | -- intersect: 47234506630.34316
[2025-06-03 18:06:28] 2025-06-03 16:06:00,422 | INFO     | current memory leak: -27.01 B/s (using 196 data points, chi2=0.20)
[2025-06-03 18:06:28] 2025-06-03 16:06:00,423 | INFO     | ..............................
[2025-06-03 18:06:28] 2025-06-03 16:06:00,423 | INFO     | . Timing measurements:
[2025-06-03 18:06:28] 2025-06-03 16:06:00,423 | INFO     | . get job = 0 s
[2025-06-03 18:06:28] 2025-06-03 16:06:00,423 | INFO     | . initial setup = 2 s
[2025-06-03 18:06:28] 2025-06-03 16:06:00,423 | INFO     | . payload setup = 13 s
[2025-06-03 18:06:28] 2025-06-03 16:06:00,423 | INFO     | . stage-in = 0 s
[2025-06-03 18:06:28] 2025-06-03 16:06:00,423 | INFO     | . payload execution = 13843 s
[2025-06-03 18:06:28] 2025-06-03 16:06:00,423 | INFO     | . stage-out = 4 s
[2025-06-03 18:06:28] 2025-06-03 16:06:00,423 | INFO     | . log creation = 0 s
[2025-06-03 18:06:28] 2025-06-03 16:06:00,424 | INFO     | ..............................
[2025-06-03 18:06:28] 2025-06-03 16:06:00,646 | INFO     | 
[2025-06-03 18:06:28] 2025-06-03 16:06:00,646 | INFO     | job summary report
[2025-06-03 18:06:28] 2025-06-03 16:06:00,646 | INFO     | --------------------------------------------------
[2025-06-03 18:06:28] 2025-06-03 16:06:00,646 | INFO     | PanDA job id: 6677440480
[2025-06-03 18:06:28] 2025-06-03 16:06:00,647 | INFO     | task id: 45006595
[2025-06-03 18:06:28] 2025-06-03 16:06:00,647 | INFO     | errors: (none)
[2025-06-03 18:06:28] 2025-06-03 16:06:00,647 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:06:28] 2025-06-03 16:06:00,647 | INFO     | pilot state: finished 
[2025-06-03 18:06:28] 2025-06-03 16:06:00,647 | INFO     | transexitcode: 0
[2025-06-03 18:06:28] 2025-06-03 16:06:00,647 | INFO     | exeerrorcode: 0
[2025-06-03 18:06:28] 2025-06-03 16:06:00,647 | INFO     | exeerrordiag: 
[2025-06-03 18:06:28] 2025-06-03 16:06:00,647 | INFO     | exitcode: 0
[2025-06-03 18:06:28] 2025-06-03 16:06:00,647 | INFO     | exitmsg: OK
[2025-06-03 18:06:28] 2025-06-03 16:06:00,648 | INFO     | cpuconsumptiontime: 51408 s
[2025-06-03 18:06:28] 2025-06-03 16:06:00,648 | INFO     | nevents: 400
[2025-06-03 18:06:28] 2025-06-03 16:06:00,648 | INFO     | neventsw: 0
[2025-06-03 18:06:28] 2025-06-03 16:06:00,648 | INFO     | pid: 11415
[2025-06-03 18:06:28] 2025-06-03 16:06:00,648 | INFO     | pgrp: 11415
[2025-06-03 18:06:28] 2025-06-03 16:06:00,648 | INFO     | corecount: 8
[2025-06-03 18:06:28] 2025-06-03 16:06:00,648 | INFO     | event service: False
[2025-06-03 18:06:28] 2025-06-03 16:06:00,648 | INFO     | sizes: {0: 2404956, 1: 2405211, 2: 2405211, 8: 2405445, 12: 2405473, 13861: 2435304, 13867: 2444247, 13871: 2444303, 13954: 2444473}
[2025-06-03 18:06:28] 2025-06-03 16:06:00,648 | INFO     | --------------------------------------------------
[2025-06-03 18:06:28] 2025-06-03 16:06:00,649 | INFO     | 
[2025-06-03 18:06:28] 2025-06-03 16:06:00,649 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-06-03 18:06:28] 2025-06-03 16:06:01,156 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:06:28] 2025-06-03 16:06:01,156 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:06:28] 2025-06-03 16:06:01,156 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:06:28] 2025-06-03 16:06:01,156 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:06:28] 2025-06-03 16:06:01,156 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:06:28] 2025-06-03 16:06:01,156 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:06:28] 2025-06-03 16:06:01,156 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:06:28] 2025-06-03 16:06:01,157 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:06:28] 2025-06-03 16:06:01,157 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:06:28] 2025-06-03 16:06:01,157 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:06:28] 2025-06-03 16:06:01,157 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:06:28] 2025-06-03 16:06:01,157 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:06:28] 2025-06-03 16:06:01,157 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:06:28] 2025-06-03 16:06:01,157 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:06:28] 2025-06-03 16:06:01,157 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:06:28] 2025-06-03 16:06:01,157 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:06:28] 2025-06-03 16:06:01,157 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:06:28] 2025-06-03 16:06:01,157 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:06:28] 2025-06-03 16:06:01,158 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:06:28] 2025-06-03 16:06:01,158 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:06:28] 2025-06-03 16:06:01,158 | INFO     | job 6677440480 has completed (purged errors)
[2025-06-03 18:06:28] 2025-06-03 16:06:01,158 | INFO     | overall cleanup function is called
[2025-06-03 18:06:28] 2025-06-03 16:06:02,167 | INFO     | --- collectZombieJob: --- 10, [11415]
[2025-06-03 18:06:28] 2025-06-03 16:06:02,167 | INFO     | zombie collector waiting for pid 11415
[2025-06-03 18:06:28] 2025-06-03 16:06:02,167 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:06:28] 2025-06-03 16:06:02,167 | INFO     | collected zombie processes
[2025-06-03 18:06:28] 2025-06-03 16:06:02,167 | INFO     | will attempt to kill all subprocesses of pid=11415
[2025-06-03 18:06:28] 2025-06-03 16:06:02,278 | INFO     | process IDs to be killed: [11415] (in reverse order)
[2025-06-03 18:06:28] 2025-06-03 16:06:02,769 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:06:28] 2025-06-03 16:06:02,769 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:06:28] 2025-06-03 16:06:02,789 | INFO     | did not find any defunct processes belonging to 11415
[2025-06-03 18:06:28] 2025-06-03 16:06:02,792 | INFO     | did not find any defunct processes belonging to 11415
[2025-06-03 18:06:28] 2025-06-03 16:06:02,793 | INFO     | ready for new job
[2025-06-03 18:06:28] 2025-06-03 16:06:02,793 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:06:28] 2025-06-03 16:06:02,795 | INFO     | **************************************
[2025-06-03 18:06:28] 2025-06-03 16:06:02,795 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:06:28] 2025-06-03 16:06:02,795 | INFO     | **************************************
[2025-06-03 18:06:28] 2025-06-03 16:06:02,796 | INFO     | 
[2025-06-03 18:06:28] 2025-06-03 16:06:02,796 | INFO     | pilot is running in a VM
[2025-06-03 18:06:28] 2025-06-03 16:06:02,796 | INFO     | architecture information:
[2025-06-03 18:06:28] 2025-06-03 16:06:02,805 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:06:28] 2025-06-03 16:06:02,964 | INFO     | cat /etc/os-release:
[2025-06-03 18:06:28] NAME="CentOS Linux"
[2025-06-03 18:06:28] VERSION="7 (Core)"
[2025-06-03 18:06:28] ID="centos"
[2025-06-03 18:06:28] ID_LIKE="rhel fedora"
[2025-06-03 18:06:28] VERSION_ID="7"
[2025-06-03 18:06:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:06:28] ANSI_COLOR="0;31"
[2025-06-03 18:06:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:06:28] HOME_URL="https://www.centos.org/"
[2025-06-03 18:06:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:06:28] 
[2025-06-03 18:06:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:06:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:06:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:06:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:06:28] 
[2025-06-03 18:06:28] 2025-06-03 16:06:02,965 | INFO     | **************************************
[2025-06-03 18:06:28] 2025-06-03 16:06:03,468 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-06-03 18:06:28] 2025-06-03 16:06:03,701 | INFO     | sufficient remaining disk space (496972595200 B)
[2025-06-03 18:06:28] 2025-06-03 16:06:03,701 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:06:28] 2025-06-03 16:06:03,701 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:06:28] 2025-06-03 16:06:03,701 | INFO     | update_server=False
[2025-06-03 18:06:28] 2025-06-03 16:06:03,701 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:06:28] 2025-06-03 16:06:04,098 | INFO     | all payload control threads have been joined
[2025-06-03 18:06:28] 2025-06-03 16:06:04,139 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:06:28] 2025-06-03 16:06:04,141 | INFO     | all data control threads have been joined
[2025-06-03 18:06:28] 2025-06-03 16:06:04,148 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:06:28] 2025-06-03 16:06:04,148 | INFO     | aborting loop
[2025-06-03 18:06:28] 2025-06-03 16:06:04,422 | INFO     | all job control threads have been joined
[2025-06-03 18:06:28] 2025-06-03 16:06:04,457 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:06:28] 2025-06-03 16:06:04,651 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:06:28] 2025-06-03 16:06:04,651 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:06:28] 2025-06-03 16:06:04,651 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:06:28] 2025-06-03 16:06:04,708 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:06:28] 2025-06-03 16:06:04,709 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:06:28] 2025-06-03 16:06:04,715 | INFO     | [job] validate thread has finished
[2025-06-03 18:06:28] 2025-06-03 16:06:04,730 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:06:28] 2025-06-03 16:06:04,731 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:06:28] 2025-06-03 16:06:05,104 | INFO     | [payload] control thread has finished
[2025-06-03 18:06:28] 2025-06-03 16:06:05,147 | INFO     | [data] control thread has finished
[2025-06-03 18:06:28] 2025-06-03 16:06:05,154 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:06:28] 2025-06-03 16:06:05,290 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:06:28] 2025-06-03 16:06:05,428 | INFO     | [job] control thread has finished
[2025-06-03 18:06:28] 2025-06-03 16:06:05,464 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:06:28] 2025-06-03 16:06:05,495 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:06:28] 2025-06-03 16:06:05,561 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:06:28] 2025-06-03 16:06:05,583 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:06:28] 2025-06-03 16:06:06,464 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:06:28] 2025-06-03 16:06:06,588 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:06:28] 2025-06-03 16:06:08,148 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:06:28] 2025-06-03 16:06:09,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140004855846720)>', '<ExcThread(monitor, started 140004558878464)>']
[2025-06-03 18:06:28] 2025-06-03 16:06:09,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:06:28] 2025-06-03 16:06:09,681 | INFO     | [monitor] control thread has ended
[2025-06-03 18:06:28] 2025-06-03 16:06:14,132 | INFO     | all workflow threads have been joined
[2025-06-03 18:06:28] 2025-06-03 16:06:14,132 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:06:28] 2025-06-03 16:06:14,132 | INFO     | traces error code: 0
[2025-06-03 18:06:28] 2025-06-03 16:06:14,133 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:06:28] 2025-06-03 16:06:14,356 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:06:28] 2025-06-03 16:06:14,361 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:06:28] 2025-06-03 16:06:14,365 [wrapper] pilotpid: 2894
[2025-06-03 18:06:28] 2025-06-03 16:06:14,368 [wrapper] Pilot exit status: 0
[2025-06-03 18:06:28] 2025-06-03 16:06:14,592 [wrapper] pandaids: 6677440480
[2025-06-03 18:06:28] 2025-06-03 16:06:15,160 [wrapper] cleanup supervisor_pilot 15189 2895
[2025-06-03 18:06:28] 2025-06-03 16:06:15,194 [wrapper] Test setup, not cleaning
[2025-06-03 18:06:28] 2025-06-03 16:06:15,240 [wrapper] apfmon messages muted
[2025-06-03 18:06:28] 2025-06-03 16:06:15,286 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:06:28] 2025-06-03 16:06:15,367 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:06:28]  *** Error codes and diagnostics ***
[2025-06-03 18:06:28]     "exeErrorCode": 0,
[2025-06-03 18:06:28]     "exeErrorDiag": "",
[2025-06-03 18:06:28]     "pilotErrorCode": 0,
[2025-06-03 18:06:28]     "pilotErrorDiag": "",
[2025-06-03 18:06:28]  *** Listing of results directory ***
[2025-06-03 18:06:28] total 388888
[2025-06-03 18:06:28] -rw-r--r--. 1 boinc boinc    495897 Jun  3 02:19 pilot3.tar.gz
[2025-06-03 18:06:28] -rwx------. 1 boinc boinc     37140 Jun  3 02:32 runpilot2-wrapper.sh
[2025-06-03 18:06:28] -rw-r--r--. 1 boinc boinc      5111 Jun  3 02:32 queuedata.json
[2025-06-03 18:06:28] -rw-r--r--. 1 boinc boinc       100 Jun  3 14:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:06:28] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 14:12 run_atlas
[2025-06-03 18:06:28] -rw-r--r--. 1 boinc boinc       105 Jun  3 14:12 job.xml
[2025-06-03 18:06:28] -rw-r--r--. 2 boinc boinc 214467303 Jun  3 14:12 EVNT.45006593._000612.pool.root.1
[2025-06-03 18:06:28] -rw-r--r--. 2 boinc boinc    508875 Jun  3 14:12 input.tar.gz
[2025-06-03 18:06:28] -rw-r--r--. 1 boinc boinc      6392 Jun  3 14:12 init_data.xml
[2025-06-03 18:06:28] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:12 start_atlas.sh
[2025-06-03 18:06:28] drwxrwx--x. 2 boinc boinc        68 Jun  3 14:12 shared
[2025-06-03 18:06:28] -rw-r--r--. 1 boinc boinc         0 Jun  3 14:12 boinc_lockfile
[2025-06-03 18:06:28] -rw-r--r--. 1 boinc boinc      2524 Jun  3 14:12 pandaJob.out
[2025-06-03 18:06:28] -rw-------. 1 boinc boinc    982666 Jun  3 14:13 agis_schedconf.cvmfs.json
[2025-06-03 18:06:28] drwx------. 4 boinc boinc      4096 Jun  3 14:13 pilot3
[2025-06-03 18:06:28] -rw-------. 1 boinc boinc 176756687 Jun  3 18:03 HITS.45006595._015285.pool.root.1
[2025-06-03 18:06:28] -rw-r--r--. 1 boinc boinc       530 Jun  3 18:04 boinc_task_state.xml
[2025-06-03 18:06:28] -rw-------. 1 boinc boinc      1018 Jun  3 18:04 memory_monitor_summary.json
[2025-06-03 18:06:28] -rw-------. 1 boinc boinc   1603667 Jun  3 18:04 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:06:28] -rw-------. 1 boinc boinc    378320 Jun  3 18:04 log.45006595._015285.job.log.tgz.1
[2025-06-03 18:06:28] -rw-------. 1 boinc boinc        95 Jun  3 18:05 pilot_heartbeat.json
[2025-06-03 18:06:28] -rw-------. 1 boinc boinc      7694 Jun  3 18:06 heartbeat.json
[2025-06-03 18:06:28] -rw-------. 1 boinc boinc      4417 Jun  3 18:06 pilotlog.txt
[2025-06-03 18:06:28] -rw-------. 1 boinc boinc   1210609 Jun  3 18:06 log.45006595._015285.job.log.1
[2025-06-03 18:06:28] -rw-------. 1 boinc boinc       357 Jun  3 18:06 output.list
[2025-06-03 18:06:28] -rw-r--r--. 1 boinc boinc       620 Jun  3 18:06 runtime_log
[2025-06-03 18:06:28] -rw-------. 1 boinc boinc   1607680 Jun  3 18:06 result.tar.gz
[2025-06-03 18:06:28] -rw-r--r--. 1 boinc boinc      8673 Jun  3 18:06 runtime_log.err
[2025-06-03 18:06:28] -rw-------. 1 boinc boinc       656 Jun  3 18:06 PAMKDmXlUg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6GhKDmq9wMgn.diag
[2025-06-03 18:06:28] -rw-r--r--. 1 boinc boinc      8192 Jun  3 18:06 boinc_mmap_file
[2025-06-03 18:06:28] -rw-r--r--. 1 boinc boinc        28 Jun  3 18:06 wrapper_checkpoint.txt
[2025-06-03 18:06:28] -rw-r--r--. 1 boinc boinc     20501 Jun  3 18:06 stderr.txt
[2025-06-03 18:06:28] HITS file was successfully produced:
[2025-06-03 18:06:28] -rw-------. 1 boinc boinc 176756687 Jun  3 18:03 shared/HITS.pool.root.1
[2025-06-03 18:06:28]  *** Contents of shared directory: ***
[2025-06-03 18:06:28] total 384148
[2025-06-03 18:06:28] -rw-r--r--. 2 boinc boinc 214467303 Jun  3 14:12 ATLAS.root_0
[2025-06-03 18:06:28] -rw-r--r--. 2 boinc boinc    508875 Jun  3 14:12 input.tar.gz
[2025-06-03 18:06:28] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:12 start_atlas.sh
[2025-06-03 18:06:28] -rw-------. 1 boinc boinc 176756687 Jun  3 18:03 HITS.pool.root.1
[2025-06-03 18:06:28] -rw-------. 1 boinc boinc   1607680 Jun  3 18:06 result.tar.gz
18:06:30 (31295): run_atlas exited; CPU time 51581.412117
18:06:30 (31295): called boinc_finish(0)

</stderr_txt>
]]>

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