Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:33:01 (18714): wrapper (7.7.26015): starting
14:33:01 (18714): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:33:01] Arguments: --nthreads 8
[2025-06-03 14:33:01] Threads: 8
[2025-06-03 14:33:01] Checking for CVMFS
[2025-06-03 14:33:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:33:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:33:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:33:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:33:03] 2.11.2.0 22417 31761 88956 146741 1 59 21914213 25165825 4633 130560 0 15947356 99.775 18315741 2152 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 14:33:03] CVMFS is ok
[2025-06-03 14:33:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:33:03] Checking for apptainer binary...
[2025-06-03 14:33:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:33:03] Running /usr/bin/apptainer --version
[2025-06-03 14:33:03] apptainer version 1.3.2-1.el7
[2025-06-03 14:33:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:48:21] cg-vwn254.simple-grid.lan
[2025-06-03 14:48:21] apptainer works
[2025-06-03 14:48:21] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:48:21] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:48:21] Starting ATLAS job with PandaID=6677440361
[2025-06-03 14:48:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:08:22]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:08:22] 2025-06-03 16:46:50,578 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:08:22] 2025-06-03 16:46:50,578 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:08:22] 2025-06-03 16:46:50,583 | INFO     | fitting pss+swap vs Time
[2025-06-03 20:08:22] 2025-06-03 16:46:50,584 | INFO     | sum of square deviations: 3675146117.0
[2025-06-03 20:08:22] 2025-06-03 16:46:50,586 | INFO     | sum of deviations: -15440206418.000004
[2025-06-03 20:08:22] 2025-06-03 16:46:50,586 | INFO     | mean x: 1748962177.5
[2025-06-03 20:08:22] 2025-06-03 16:46:50,586 | INFO     | mean y: 2495946.48245614
[2025-06-03 20:08:22] 2025-06-03 16:46:50,586 | INFO     | -- intersect: 7350322720.760003
[2025-06-03 20:08:22] 2025-06-03 16:46:50,586 | INFO     | intersect: 7350322720.760003
[2025-06-03 20:08:22] 2025-06-03 16:46:50,587 | INFO     | chi2: 2.4432649090253205
[2025-06-03 20:08:22] 2025-06-03 16:46:50,587 | INFO     | sum of square deviations: 3438620752.0
[2025-06-03 20:08:22] 2025-06-03 16:46:50,589 | INFO     | sum of deviations: -89110569.00001071
[2025-06-03 20:08:22] 2025-06-03 16:46:50,589 | INFO     | mean x: 1748962025.0
[2025-06-03 20:08:22] 2025-06-03 16:46:50,589 | INFO     | mean y: 2505671.8251121077
[2025-06-03 20:08:22] 2025-06-03 16:46:50,590 | INFO     | -- intersect: 47829367.7041978
[2025-06-03 20:08:22] 2025-06-03 16:46:50,590 | INFO     | intersect: 47829367.7041978
[2025-06-03 20:08:22] 2025-06-03 16:46:50,590 | INFO     | chi2: 1.6776299974349147
[2025-06-03 20:08:22] 2025-06-03 16:46:50,590 | INFO     | current chi2=1.6776299974349147 (change=31.33654925268978 %)
[2025-06-03 20:08:22] 2025-06-03 16:46:50,591 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 20:08:22] 2025-06-03 16:46:50,593 | INFO     | sum of deviations: 3285703.9999975674
[2025-06-03 20:08:22] 2025-06-03 16:46:50,593 | INFO     | mean x: 1748961872.5
[2025-06-03 20:08:22] 2025-06-03 16:46:50,593 | INFO     | mean y: 2505734.247706422
[2025-06-03 20:08:22] 2025-06-03 16:46:50,593 | INFO     | -- intersect: 716900.3659115175
[2025-06-03 20:08:22] 2025-06-03 16:46:50,593 | INFO     | intersect: 716900.3659115175
[2025-06-03 20:08:22] 2025-06-03 16:46:50,593 | INFO     | chi2: 1.6777769604905943
[2025-06-03 20:08:22] 2025-06-03 16:46:50,594 | INFO     | current chi2=1.6777769604905943 (change=-0.008760159028172664 %)
[2025-06-03 20:08:22] 2025-06-03 16:46:50,594 | INFO     | right removable region: 217
[2025-06-03 20:08:22] 2025-06-03 16:46:50,594 | INFO     | sum of square deviations: 3438620752.0
[2025-06-03 20:08:22] 2025-06-03 16:46:50,596 | INFO     | sum of deviations: -51163016535.99999
[2025-06-03 20:08:22] 2025-06-03 16:46:50,596 | INFO     | mean x: 1748962330.0
[2025-06-03 20:08:22] 2025-06-03 16:46:50,596 | INFO     | mean y: 2518764.600896861
[2025-06-03 20:08:22] 2025-06-03 16:46:50,597 | INFO     | -- intersect: 26025216544.978592
[2025-06-03 20:08:22] 2025-06-03 16:46:50,597 | INFO     | intersect: 26025216544.978592
[2025-06-03 20:08:22] 2025-06-03 16:46:50,597 | INFO     | chi2: 0.9630525458522088
[2025-06-03 20:08:22] 2025-06-03 16:46:50,597 | INFO     | current chi2=0.9630525458522088 (change=60.58337586338951 %)
[2025-06-03 20:08:22] 2025-06-03 16:46:50,598 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 20:08:22] 2025-06-03 16:46:50,600 | INFO     | sum of deviations: -45341160401.50001
[2025-06-03 20:08:22] 2025-06-03 16:46:50,600 | INFO     | mean x: 1748962482.5
[2025-06-03 20:08:22] 2025-06-03 16:46:50,600 | INFO     | mean y: 2514827.1788990824
[2025-06-03 20:08:22] 2025-06-03 16:46:50,600 | INFO     | -- intersect: 24687584527.555164
[2025-06-03 20:08:22] 2025-06-03 16:46:50,600 | INFO     | intersect: 24687584527.555164
[2025-06-03 20:08:22] 2025-06-03 16:46:50,601 | INFO     | chi2: 0.9555808167487381
[2025-06-03 20:08:22] 2025-06-03 16:46:50,601 | INFO     | current chi2=0.9555808167487381 (change=0.7758381550052343 %)
[2025-06-03 20:08:22] 2025-06-03 16:46:50,601 | INFO     | left removable region: 20
[2025-06-03 20:08:22] 2025-06-03 16:46:50,601 | INFO     | sum of square deviations: 2370641658.0
[2025-06-03 20:08:22] 2025-06-03 16:46:50,603 | INFO     | sum of deviations: -14787022017.0
[2025-06-03 20:08:22] 2025-06-03 16:46:50,603 | INFO     | mean x: 1748962452.0
[2025-06-03 20:08:22] 2025-06-03 16:46:50,603 | INFO     | mean y: 2514558.9847715735
[2025-06-03 20:08:22] 2025-06-03 16:46:50,603 | INFO     | -- intersect: 10911774588.798315
[2025-06-03 20:08:22] 2025-06-03 16:46:50,604 | INFO     | intersect: 10911774588.798315
[2025-06-03 20:08:22] 2025-06-03 16:46:50,604 | INFO     | chi2: 0.11852392744299539
[2025-06-03 20:08:22] 2025-06-03 16:46:50,604 | INFO     | -- intersect: 10911774588.798315
[2025-06-03 20:08:22] 2025-06-03 16:46:50,604 | INFO     | current memory leak: -6.24 B/s (using 197 data points, chi2=0.12)
[2025-06-03 20:08:22] 2025-06-03 16:46:50,605 | INFO     | ..............................
[2025-06-03 20:08:22] 2025-06-03 16:46:50,605 | INFO     | . Timing measurements:
[2025-06-03 20:08:22] 2025-06-03 16:46:50,605 | INFO     | . get job = 0 s
[2025-06-03 20:08:22] 2025-06-03 16:46:50,605 | INFO     | . initial setup = 13 s
[2025-06-03 20:08:22] 2025-06-03 16:46:50,606 | INFO     | . payload setup = 15 s
[2025-06-03 20:08:22] 2025-06-03 16:46:50,606 | INFO     | . stage-in = 0 s
[2025-06-03 20:08:22] 2025-06-03 16:46:50,606 | INFO     | . payload execution = 13888 s
[2025-06-03 20:08:22] 2025-06-03 16:46:50,606 | INFO     | . stage-out = 3 s
[2025-06-03 20:08:22] 2025-06-03 16:46:50,606 | INFO     | . log creation = 1 s
[2025-06-03 20:08:22] 2025-06-03 16:46:50,606 | INFO     | ..............................
[2025-06-03 20:08:22] 2025-06-03 16:46:51,008 | INFO     | 
[2025-06-03 20:08:22] 2025-06-03 16:46:51,008 | INFO     | job summary report
[2025-06-03 20:08:22] 2025-06-03 16:46:51,008 | INFO     | --------------------------------------------------
[2025-06-03 20:08:22] 2025-06-03 16:46:51,008 | INFO     | PanDA job id: 6677440361
[2025-06-03 20:08:22] 2025-06-03 16:46:51,008 | INFO     | task id: 45006595
[2025-06-03 20:08:22] 2025-06-03 16:46:51,008 | INFO     | errors: (none)
[2025-06-03 20:08:22] 2025-06-03 16:46:51,008 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:08:22] 2025-06-03 16:46:51,008 | INFO     | pilot state: finished 
[2025-06-03 20:08:22] 2025-06-03 16:46:51,009 | INFO     | transexitcode: 0
[2025-06-03 20:08:22] 2025-06-03 16:46:51,009 | INFO     | exeerrorcode: 0
[2025-06-03 20:08:22] 2025-06-03 16:46:51,009 | INFO     | exeerrordiag: 
[2025-06-03 20:08:22] 2025-06-03 16:46:51,009 | INFO     | exitcode: 0
[2025-06-03 20:08:22] 2025-06-03 16:46:51,009 | INFO     | exitmsg: OK
[2025-06-03 20:08:22] 2025-06-03 16:46:51,009 | INFO     | cpuconsumptiontime: 51227 s
[2025-06-03 20:08:22] 2025-06-03 16:46:51,009 | INFO     | nevents: 400
[2025-06-03 20:08:22] 2025-06-03 16:46:51,009 | INFO     | neventsw: 0
[2025-06-03 20:08:22] 2025-06-03 16:46:51,009 | INFO     | pid: 7237
[2025-06-03 20:08:22] 2025-06-03 16:46:51,009 | INFO     | pgrp: 7237
[2025-06-03 20:08:22] 2025-06-03 16:46:51,009 | INFO     | corecount: 8
[2025-06-03 20:08:22] 2025-06-03 16:46:51,009 | INFO     | event service: False
[2025-06-03 20:08:22] 2025-06-03 16:46:51,010 | INFO     | sizes: {0: 2404955, 1: 2405210, 12: 2405210, 23: 2405238, 34: 2405266, 44: 2405294, 55: 2405450, 66: 2405478, 76: 2405506, 87: 2405768, 98: 2405796, 13908: 2435877
[2025-06-03 20:08:22] 2025-06-03 16:46:51,010 | INFO     | --------------------------------------------------
[2025-06-03 20:08:22] 2025-06-03 16:46:51,010 | INFO     | 
[2025-06-03 20:08:22] 2025-06-03 16:46:51,010 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-03 20:08:22] 2025-06-03 16:46:51,438 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:08:22] 2025-06-03 16:46:51,439 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:08:22] 2025-06-03 16:46:51,439 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:08:22] 2025-06-03 16:46:51,439 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:08:22] 2025-06-03 16:46:51,439 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:08:22] 2025-06-03 16:46:51,439 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:08:22] 2025-06-03 16:46:51,439 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:08:22] 2025-06-03 16:46:51,439 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:08:22] 2025-06-03 16:46:51,439 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:08:22] 2025-06-03 16:46:51,439 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:08:22] 2025-06-03 16:46:51,439 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:08:22] 2025-06-03 16:46:51,440 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:08:22] 2025-06-03 16:46:51,440 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:08:22] 2025-06-03 16:46:51,440 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:08:22] 2025-06-03 16:46:51,440 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:08:22] 2025-06-03 16:46:51,440 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:08:22] 2025-06-03 16:46:51,440 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:08:22] 2025-06-03 16:46:51,440 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:08:22] 2025-06-03 16:46:51,440 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:08:22] 2025-06-03 16:46:51,440 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:08:22] 2025-06-03 16:46:51,440 | INFO     | job 6677440361 has completed (purged errors)
[2025-06-03 20:08:22] 2025-06-03 16:46:51,440 | INFO     | overall cleanup function is called
[2025-06-03 20:08:22] 2025-06-03 16:46:52,449 | INFO     | --- collectZombieJob: --- 10, [7237]
[2025-06-03 20:08:22] 2025-06-03 16:46:52,449 | INFO     | zombie collector waiting for pid 7237
[2025-06-03 20:08:22] 2025-06-03 16:46:52,449 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:08:22] 2025-06-03 16:46:52,449 | INFO     | collected zombie processes
[2025-06-03 20:08:22] 2025-06-03 16:46:52,449 | INFO     | will attempt to kill all subprocesses of pid=7237
[2025-06-03 20:08:22] 2025-06-03 16:46:52,579 | INFO     | process IDs to be killed: [7237] (in reverse order)
[2025-06-03 20:08:22] 2025-06-03 16:46:53,174 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:08:22] 2025-06-03 16:46:53,174 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:08:22] 2025-06-03 16:46:53,180 | INFO     | did not find any defunct processes belonging to 7237
[2025-06-03 20:08:22] 2025-06-03 16:46:53,184 | INFO     | did not find any defunct processes belonging to 7237
[2025-06-03 20:08:22] 2025-06-03 16:46:53,184 | INFO     | ready for new job
[2025-06-03 20:08:22] 2025-06-03 16:46:53,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:08:22] 2025-06-03 16:46:53,186 | INFO     | **************************************
[2025-06-03 20:08:22] 2025-06-03 16:46:53,186 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:08:22] 2025-06-03 16:46:53,187 | INFO     | **************************************
[2025-06-03 20:08:22] 2025-06-03 16:46:53,187 | INFO     | 
[2025-06-03 20:08:22] 2025-06-03 16:46:53,187 | INFO     | pilot is running in a VM
[2025-06-03 20:08:22] 2025-06-03 16:46:53,187 | INFO     | architecture information:
[2025-06-03 20:08:22] 2025-06-03 16:46:53,188 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:08:22] 2025-06-03 16:46:53,389 | INFO     | cat /etc/os-release:
[2025-06-03 20:08:22] NAME="CentOS Linux"
[2025-06-03 20:08:22] VERSION="7 (Core)"
[2025-06-03 20:08:22] ID="centos"
[2025-06-03 20:08:22] ID_LIKE="rhel fedora"
[2025-06-03 20:08:22] VERSION_ID="7"
[2025-06-03 20:08:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:08:22] ANSI_COLOR="0;31"
[2025-06-03 20:08:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:08:22] HOME_URL="https://www.centos.org/"
[2025-06-03 20:08:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:08:22] 
[2025-06-03 20:08:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:08:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:08:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:08:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:08:22] 
[2025-06-03 20:08:22] 2025-06-03 16:46:53,389 | INFO     | **************************************
[2025-06-03 20:08:22] 2025-06-03 16:46:53,487 | INFO     | PID=31454 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 20:08:22] 2025-06-03 16:46:53,487 | INFO     | .. there are 9 such processes running
[2025-06-03 20:08:22] 2025-06-03 16:46:53,893 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-03 20:08:22] 2025-06-03 16:46:54,114 | INFO     | sufficient remaining disk space (496849911808 B)
[2025-06-03 20:08:22] 2025-06-03 16:46:54,115 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:08:22] 2025-06-03 16:46:54,115 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:08:22] 2025-06-03 16:46:54,115 | INFO     | update_server=False
[2025-06-03 20:08:22] 2025-06-03 16:46:54,115 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:08:22] 2025-06-03 16:46:54,116 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 20:08:22] 2025-06-03 16:46:54,116 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:08:22] 2025-06-03 16:46:54,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:08:22] 2025-06-03 16:46:54,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:08:22] 2025-06-03 16:46:54,116 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:08:22] 2025-06-03 16:46:54,120 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:08:22] 2025-06-03 16:46:54,120 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:08:22] 2025-06-03 16:46:54,120 | INFO     | aborting loop
[2025-06-03 20:08:22] 2025-06-03 16:46:54,315 | INFO     | all job control threads have been joined
[2025-06-03 20:08:22] 2025-06-03 16:46:55,074 | INFO     | all payload control threads have been joined
[2025-06-03 20:08:22] 2025-06-03 16:46:55,125 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:08:22] 2025-06-03 16:46:55,126 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:08:22] 2025-06-03 16:46:55,207 | INFO     | all data control threads have been joined
[2025-06-03 20:08:22] 2025-06-03 16:46:55,285 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:08:22] 2025-06-03 16:46:55,320 | INFO     | [job] control thread has finished
[2025-06-03 20:08:22] 2025-06-03 16:46:55,494 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:08:22] 2025-06-03 16:46:55,566 | INFO     | [job] validate thread has finished
[2025-06-03 20:08:22] 2025-06-03 16:46:55,575 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:08:22] 2025-06-03 16:46:55,632 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:08:22] 2025-06-03 16:46:55,768 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:08:22] 2025-06-03 16:46:56,080 | INFO     | [payload] control thread has finished
[2025-06-03 20:08:22] 2025-06-03 16:46:56,127 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:08:22] 2025-06-03 16:46:56,213 | INFO     | [data] control thread has finished
[2025-06-03 20:08:22] 2025-06-03 16:46:56,290 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:08:22] 2025-06-03 16:46:56,622 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:08:22] 2025-06-03 16:46:56,774 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:08:22] 2025-06-03 16:46:58,126 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:08:22] 2025-06-03 16:47:04,987 | INFO     | job.realtimelogging is not enabled
[2025-06-03 20:08:22] 2025-06-03 16:47:05,993 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:08:22] 2025-06-03 16:47:06,980 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139853922666304)>', '<ExcThread(monitor, started 139853614257920)>']
[2025-06-03 20:08:22] 2025-06-03 16:47:07,194 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:08:22] 2025-06-03 16:47:07,194 | INFO     | [monitor] control thread has ended
[2025-06-03 20:08:22] 2025-06-03 16:47:12,006 | INFO     | all workflow threads have been joined
[2025-06-03 20:08:22] 2025-06-03 16:47:12,006 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:08:22] 2025-06-03 16:47:12,006 | INFO     | traces error code: 0
[2025-06-03 20:08:22] 2025-06-03 16:47:12,006 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:08:22] 2025-06-03 16:47:12,374 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:08:22] 2025-06-03 16:47:12,451 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:08:22] 2025-06-03 16:47:12,560 [wrapper] pilotpid: 31454
[2025-06-03 20:08:22] 2025-06-03 16:47:12,670 [wrapper] Pilot exit status: 0
[2025-06-03 20:08:22] 2025-06-03 16:47:13,085 [wrapper] pandaids: 6677440361
[2025-06-03 20:08:22] 2025-06-03 16:47:14,002 [wrapper] cleanup supervisor_pilot 15416 31455
[2025-06-03 20:08:22] 2025-06-03 16:47:14,102 [wrapper] Test setup, not cleaning
[2025-06-03 20:08:22] 2025-06-03 16:47:14,195 [wrapper] apfmon messages muted
[2025-06-03 20:08:22] 2025-06-03 16:47:14,284 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:08:22] 2025-06-03 16:47:14,351 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:08:22]  *** Error codes and diagnostics ***
[2025-06-03 20:08:22]     "exeErrorCode": 0,
[2025-06-03 20:08:22]     "exeErrorDiag": "",
[2025-06-03 20:08:22]     "pilotErrorCode": 0,
[2025-06-03 20:08:22]     "pilotErrorDiag": "",
[2025-06-03 20:08:22]  *** Listing of results directory ***
[2025-06-03 20:08:22] total 400488
[2025-06-03 20:08:22] -rw-r--r--. 1 boinc boinc    495897 Jun  3 02:19 pilot3.tar.gz
[2025-06-03 20:08:22] -rw-r--r--. 1 boinc boinc      5111 Jun  3 02:24 queuedata.json
[2025-06-03 20:08:22] -rwx------. 1 boinc boinc     37140 Jun  3 02:27 runpilot2-wrapper.sh
[2025-06-03 20:08:22] -rw-r--r--. 1 boinc boinc       100 Jun  3 14:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:08:22] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 14:33 run_atlas
[2025-06-03 20:08:22] -rw-r--r--. 1 boinc boinc       105 Jun  3 14:33 job.xml
[2025-06-03 20:08:22] -rw-r--r--. 2 boinc boinc 214862298 Jun  3 14:33 EVNT.45006593._000607.pool.root.1
[2025-06-03 20:08:22] -rw-r--r--. 2 boinc boinc    508877 Jun  3 14:33 input.tar.gz
[2025-06-03 20:08:22] -rw-r--r--. 1 boinc boinc      6390 Jun  3 14:33 init_data.xml
[2025-06-03 20:08:22] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:33 start_atlas.sh
[2025-06-03 20:08:22] drwxrwx--x. 2 boinc boinc        68 Jun  3 14:33 shared
[2025-06-03 20:08:22] -rw-r--r--. 1 boinc boinc         0 Jun  3 14:33 boinc_lockfile
[2025-06-03 20:08:22] -rw-r--r--. 1 boinc boinc      2524 Jun  3 14:48 pandaJob.out
[2025-06-03 20:08:22] -rw-------. 1 boinc boinc    982666 Jun  3 14:51 agis_schedconf.cvmfs.json
[2025-06-03 20:08:22] drwx------. 4 boinc boinc      4096 Jun  3 14:51 pilot3
[2025-06-03 20:08:22] -rw-------. 1 boinc boinc 188223938 Jun  3 18:44 HITS.45006595._015166.pool.root.1
[2025-06-03 20:08:22] -rw-r--r--. 1 boinc boinc       531 Jun  3 18:44 boinc_task_state.xml
[2025-06-03 20:08:22] -rw-------. 1 boinc boinc      1019 Jun  3 18:45 memory_monitor_summary.json
[2025-06-03 20:08:22] -rw-------. 1 boinc boinc   1603667 Jun  3 18:45 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:08:22] -rw-------. 1 boinc boinc    384012 Jun  3 18:45 log.45006595._015166.job.log.tgz.1
[2025-06-03 20:08:22] -rw-------. 1 boinc boinc        95 Jun  3 18:46 pilot_heartbeat.json
[2025-06-03 20:08:22] -rw-------. 1 boinc boinc      7685 Jun  3 18:46 heartbeat.json
[2025-06-03 20:08:22] -rw-------. 1 boinc boinc      5003 Jun  3 18:47 pilotlog.txt
[2025-06-03 20:08:22] -rw-------. 1 boinc boinc   1215664 Jun  3 18:47 log.45006595._015166.job.log.1
[2025-06-03 20:08:22] -rw-------. 1 boinc boinc       357 Jun  3 18:47 output.list
[2025-06-03 20:08:22] -rw-r--r--. 1 boinc boinc       620 Jun  3 18:47 runtime_log
[2025-06-03 20:08:22] -rw-------. 1 boinc boinc   1617920 Jun  3 18:47 result.tar.gz
[2025-06-03 20:08:22] -rw-r--r--. 1 boinc boinc      8659 Jun  3 18:47 runtime_log.err
[2025-06-03 20:08:22] -rw-------. 1 boinc boinc       656 Jun  3 18:47 jobMDmjfUg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmsxWKDmt4E8Zm.diag
[2025-06-03 20:08:22] -rw-r--r--. 1 boinc boinc      8192 Jun  3 20:08 boinc_mmap_file
[2025-06-03 20:08:22] -rw-r--r--. 1 boinc boinc        28 Jun  3 20:08 wrapper_checkpoint.txt
[2025-06-03 20:08:22] -rw-r--r--. 1 boinc boinc     20619 Jun  3 20:08 stderr.txt
[2025-06-03 20:08:22] HITS file was successfully produced:
[2025-06-03 20:08:22] -rw-------. 1 boinc boinc 188223938 Jun  3 18:44 shared/HITS.pool.root.1
[2025-06-03 20:08:22]  *** Contents of shared directory: ***
[2025-06-03 20:08:22] total 395740
[2025-06-03 20:08:22] -rw-r--r--. 2 boinc boinc 214862298 Jun  3 14:33 ATLAS.root_0
[2025-06-03 20:08:22] -rw-r--r--. 2 boinc boinc    508877 Jun  3 14:33 input.tar.gz
[2025-06-03 20:08:22] -rw-r--r--. 2 boinc boinc     15093 Jun  3 14:33 start_atlas.sh
[2025-06-03 20:08:22] -rw-------. 1 boinc boinc 188223938 Jun  3 18:44 HITS.pool.root.1
[2025-06-03 20:08:22] -rw-------. 1 boinc boinc   1617920 Jun  3 18:47 result.tar.gz
20:08:24 (18714): run_atlas exited; CPU time 51420.600449
20:08:24 (18714): called boinc_finish(0)

</stderr_txt>
]]>

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