Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:22:17 (3664): wrapper (7.7.26015): starting
13:22:17 (3664): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:22:17] Arguments: --nthreads 8
[2025-06-03 13:22:17] Threads: 8
[2025-06-03 13:22:17] Checking for CVMFS
[2025-06-03 13:22:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:22:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:22:19] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:22:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:22:21] 2.11.2.0 16765 31717 90824 146737 1 60 23956589 25165824 4632 130560 0 14926620 99.787 18208643 2034 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 13:22:21] CVMFS is ok
[2025-06-03 13:22:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:22:21] Checking for apptainer binary...
[2025-06-03 13:22:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:22:21] Running /usr/bin/apptainer --version
[2025-06-03 13:22:21] apptainer version 1.3.2-1.el7
[2025-06-03 13:22:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:26:04] cg-vwn404.simple-grid.lan
[2025-06-03 13:26:04] apptainer works
[2025-06-03 13:26:04] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:26:04] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:26:04] Starting ATLAS job with PandaID=6677421023
[2025-06-03 13:26:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:34:10]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:34:10] 2025-06-03 15:16:00,675 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6677421023/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 17:34:10] 2025-06-03 15:16:00,676 | INFO     | extracted standard info from prmon json
[2025-06-03 17:34:10] 2025-06-03 15:16:00,676 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:34:10] 2025-06-03 15:16:00,676 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:34:10] 2025-06-03 15:16:00,676 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:34:10] 2025-06-03 15:16:00,676 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:34:10] 2025-06-03 15:16:00,681 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:34:10] 2025-06-03 15:16:00,681 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 17:34:10] 2025-06-03 15:16:00,683 | INFO     | sum of deviations: 29472439231.500015
[2025-06-03 17:34:10] 2025-06-03 15:16:00,683 | INFO     | mean x: 1748957148.5
[2025-06-03 17:34:10] 2025-06-03 15:16:00,683 | INFO     | mean y: 2525638.3411214952
[2025-06-03 17:34:10] 2025-06-03 15:16:00,683 | INFO     | -- intersect: -16959784091.704014
[2025-06-03 17:34:10] 2025-06-03 15:16:00,683 | INFO     | intersect: -16959784091.704014
[2025-06-03 17:34:10] 2025-06-03 15:16:00,684 | INFO     | chi2: 7.912129426598129
[2025-06-03 17:34:10] 2025-06-03 15:16:00,684 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 17:34:10] 2025-06-03 15:16:00,686 | INFO     | sum of deviations: 44938302096.99999
[2025-06-03 17:34:10] 2025-06-03 15:16:00,686 | INFO     | mean x: 1748956996.0
[2025-06-03 17:34:10] 2025-06-03 15:16:00,686 | INFO     | mean y: 2536778.4210526315
[2025-06-03 17:34:10] 2025-06-03 15:16:00,686 | INFO     | -- intersect: -27761873326.2869
[2025-06-03 17:34:10] 2025-06-03 15:16:00,686 | INFO     | intersect: -27761873326.2869
[2025-06-03 17:34:10] 2025-06-03 15:16:00,687 | INFO     | chi2: 7.2130633343314505
[2025-06-03 17:34:10] 2025-06-03 15:16:00,687 | INFO     | current chi2=7.2130633343314505 (change=8.83537230718995 %)
[2025-06-03 17:34:10] 2025-06-03 15:16:00,687 | INFO     | right removable region: 208
[2025-06-03 17:34:10] 2025-06-03 15:16:00,687 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 17:34:10] 2025-06-03 15:16:00,696 | INFO     | sum of deviations: -47795769627.000015
[2025-06-03 17:34:10] 2025-06-03 15:16:00,696 | INFO     | mean x: 1748957301.0
[2025-06-03 17:34:10] 2025-06-03 15:16:00,696 | INFO     | mean y: 2582225.3205741625
[2025-06-03 17:34:10] 2025-06-03 15:16:00,697 | INFO     | -- intersect: 29532438020.68567
[2025-06-03 17:34:10] 2025-06-03 15:16:00,697 | INFO     | intersect: 29532438020.68567
[2025-06-03 17:34:10] 2025-06-03 15:16:00,697 | INFO     | chi2: 2.8266596428805437
[2025-06-03 17:34:10] 2025-06-03 15:16:00,697 | INFO     | current chi2=2.8266596428805437 (change=64.27435029843939 %)
[2025-06-03 17:34:10] 2025-06-03 15:16:00,698 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 17:34:10] 2025-06-03 15:16:00,699 | INFO     | sum of deviations: -90850613154.0
[2025-06-03 17:34:10] 2025-06-03 15:16:00,699 | INFO     | mean x: 1748957453.5
[2025-06-03 17:34:10] 2025-06-03 15:16:00,699 | INFO     | mean y: 2615162.843137255
[2025-06-03 17:34:10] 2025-06-03 15:16:00,699 | INFO     | -- intersect: 60362529808.92743
[2025-06-03 17:34:10] 2025-06-03 15:16:00,700 | INFO     | intersect: 60362529808.92743
[2025-06-03 17:34:10] 2025-06-03 15:16:00,700 | INFO     | chi2: 1.0468856187528088
[2025-06-03 17:34:10] 2025-06-03 15:16:00,700 | INFO     | current chi2=1.0468856187528088 (change=62.96386013825256 %)
[2025-06-03 17:34:10] 2025-06-03 15:16:00,700 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 17:34:10] 2025-06-03 15:16:00,702 | INFO     | sum of deviations: -94929552797.00003
[2025-06-03 17:34:10] 2025-06-03 15:16:00,702 | INFO     | mean x: 1748957606.0
[2025-06-03 17:34:10] 2025-06-03 15:16:00,702 | INFO     | mean y: 2618396.165829146
[2025-06-03 17:34:10] 2025-06-03 15:16:00,702 | INFO     | -- intersect: 67947075233.0085
[2025-06-03 17:34:10] 2025-06-03 15:16:00,702 | INFO     | intersect: 67947075233.0085
[2025-06-03 17:34:10] 2025-06-03 15:16:00,703 | INFO     | chi2: 0.954165481290925
[2025-06-03 17:34:10] 2025-06-03 15:16:00,703 | INFO     | current chi2=0.954165481290925 (change=8.856759114939845 %)
[2025-06-03 17:34:10] 2025-06-03 15:16:00,703 | INFO     | left removable region: 30
[2025-06-03 17:34:10] 2025-06-03 15:16:00,703 | INFO     | sum of square deviations: 1748737904.5
[2025-06-03 17:34:10] 2025-06-03 15:16:00,704 | INFO     | sum of deviations: -67237658333.99999
[2025-06-03 17:34:10] 2025-06-03 15:16:00,705 | INFO     | mean x: 1748957880.5
[2025-06-03 17:34:10] 2025-06-03 15:16:00,705 | INFO     | mean y: 2624164.7640449437
[2025-06-03 17:34:10] 2025-06-03 15:16:00,705 | INFO     | -- intersect: 67248740410.66245
[2025-06-03 17:34:10] 2025-06-03 15:16:00,705 | INFO     | intersect: 67248740410.66245
[2025-06-03 17:34:10] 2025-06-03 15:16:00,705 | INFO     | chi2: 0.14863844684864785
[2025-06-03 17:34:10] 2025-06-03 15:16:00,705 | INFO     | -- intersect: 67248740410.66245
[2025-06-03 17:34:10] 2025-06-03 15:16:00,706 | INFO     | current memory leak: -38.45 B/s (using 178 data points, chi2=0.15)
[2025-06-03 17:34:10] 2025-06-03 15:16:00,706 | INFO     | ..............................
[2025-06-03 17:34:10] 2025-06-03 15:16:00,707 | INFO     | . Timing measurements:
[2025-06-03 17:34:10] 2025-06-03 15:16:00,707 | INFO     | . get job = 0 s
[2025-06-03 17:34:10] 2025-06-03 15:16:00,707 | INFO     | . initial setup = 6 s
[2025-06-03 17:34:10] 2025-06-03 15:16:00,707 | INFO     | . payload setup = 167 s
[2025-06-03 17:34:10] 2025-06-03 15:16:00,707 | INFO     | . stage-in = 0 s
[2025-06-03 17:34:10] 2025-06-03 15:16:00,707 | INFO     | . payload execution = 13156 s
[2025-06-03 17:34:10] 2025-06-03 15:16:00,707 | INFO     | . stage-out = 4 s
[2025-06-03 17:34:10] 2025-06-03 15:16:00,707 | INFO     | . log creation = 1 s
[2025-06-03 17:34:10] 2025-06-03 15:16:00,707 | INFO     | ..............................
[2025-06-03 17:34:10] 2025-06-03 15:16:00,884 | INFO     | 
[2025-06-03 17:34:10] 2025-06-03 15:16:00,884 | INFO     | job summary report
[2025-06-03 17:34:10] 2025-06-03 15:16:00,884 | INFO     | --------------------------------------------------
[2025-06-03 17:34:10] 2025-06-03 15:16:00,885 | INFO     | PanDA job id: 6677421023
[2025-06-03 17:34:10] 2025-06-03 15:16:00,885 | INFO     | task id: 45006595
[2025-06-03 17:34:10] 2025-06-03 15:16:00,885 | INFO     | errors: (none)
[2025-06-03 17:34:10] 2025-06-03 15:16:00,885 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:34:10] 2025-06-03 15:16:00,885 | INFO     | pilot state: finished 
[2025-06-03 17:34:10] 2025-06-03 15:16:00,885 | INFO     | transexitcode: 0
[2025-06-03 17:34:10] 2025-06-03 15:16:00,885 | INFO     | exeerrorcode: 0
[2025-06-03 17:34:10] 2025-06-03 15:16:00,885 | INFO     | exeerrordiag: 
[2025-06-03 17:34:10] 2025-06-03 15:16:00,885 | INFO     | exitcode: 0
[2025-06-03 17:34:10] 2025-06-03 15:16:00,885 | INFO     | exitmsg: OK
[2025-06-03 17:34:10] 2025-06-03 15:16:00,885 | INFO     | cpuconsumptiontime: 48723 s
[2025-06-03 17:34:10] 2025-06-03 15:16:00,885 | INFO     | nevents: 400
[2025-06-03 17:34:10] 2025-06-03 15:16:00,886 | INFO     | neventsw: 0
[2025-06-03 17:34:10] 2025-06-03 15:16:00,886 | INFO     | pid: 21975
[2025-06-03 17:34:10] 2025-06-03 15:16:00,886 | INFO     | pgrp: 21975
[2025-06-03 17:34:10] 2025-06-03 15:16:00,886 | INFO     | corecount: 8
[2025-06-03 17:34:10] 2025-06-03 15:16:00,886 | INFO     | event service: False
[2025-06-03 17:34:10] 2025-06-03 15:16:00,886 | INFO     | sizes: {0: 2404904, 1: 2405159, 12: 2405159, 23: 2405187, 33: 2405215, 44: 2405271, 55: 2405427, 66: 2405455, 76: 2405483, 87: 2405539, 96: 2405773, 98: 2406081, 1
[2025-06-03 17:34:10] 2025-06-03 15:16:00,886 | INFO     | --------------------------------------------------
[2025-06-03 17:34:10] 2025-06-03 15:16:00,886 | INFO     | 
[2025-06-03 17:34:10] 2025-06-03 15:16:00,886 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 17:34:10] 2025-06-03 15:16:01,350 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 15:16:01,350 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 15:16:01,350 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 15:16:01,350 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 15:16:01,351 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 15:16:01,351 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 15:16:01,351 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 15:16:01,351 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 15:16:01,351 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 15:16:01,351 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 15:16:01,351 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 15:16:01,351 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 15:16:01,351 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 15:16:01,351 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 15:16:01,351 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 15:16:01,352 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 15:16:01,352 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 15:16:01,352 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:34:10] 2025-06-03 15:16:01,352 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 15:16:01,352 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:34:10] 2025-06-03 15:16:01,352 | INFO     | job 6677421023 has completed (purged errors)
[2025-06-03 17:34:10] 2025-06-03 15:16:01,352 | INFO     | overall cleanup function is called
[2025-06-03 17:34:10] 2025-06-03 15:16:02,361 | INFO     | --- collectZombieJob: --- 10, [21975]
[2025-06-03 17:34:10] 2025-06-03 15:16:02,361 | INFO     | zombie collector waiting for pid 21975
[2025-06-03 17:34:10] 2025-06-03 15:16:02,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:34:10] 2025-06-03 15:16:02,362 | INFO     | collected zombie processes
[2025-06-03 17:34:10] 2025-06-03 15:16:02,362 | INFO     | will attempt to kill all subprocesses of pid=21975
[2025-06-03 17:34:10] 2025-06-03 15:16:02,464 | INFO     | process IDs to be killed: [21975] (in reverse order)
[2025-06-03 17:34:10] 2025-06-03 15:16:03,373 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:34:10] 2025-06-03 15:16:03,374 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:34:10] 2025-06-03 15:16:03,377 | INFO     | did not find any defunct processes belonging to 21975
[2025-06-03 17:34:10] 2025-06-03 15:16:03,380 | INFO     | did not find any defunct processes belonging to 21975
[2025-06-03 17:34:10] 2025-06-03 15:16:03,381 | INFO     | ready for new job
[2025-06-03 17:34:10] 2025-06-03 15:16:03,381 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:34:10] 2025-06-03 15:16:03,383 | INFO     | **************************************
[2025-06-03 17:34:10] 2025-06-03 15:16:03,383 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:34:10] 2025-06-03 15:16:03,383 | INFO     | **************************************
[2025-06-03 17:34:10] 2025-06-03 15:16:03,383 | INFO     | 
[2025-06-03 17:34:10] 2025-06-03 15:16:03,384 | INFO     | pilot is running in a VM
[2025-06-03 17:34:10] 2025-06-03 15:16:03,384 | INFO     | architecture information:
[2025-06-03 17:34:10] 2025-06-03 15:16:03,402 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:34:10] 2025-06-03 15:16:03,744 | INFO     | cat /etc/os-release:
[2025-06-03 17:34:10] NAME="CentOS Linux"
[2025-06-03 17:34:10] VERSION="7 (Core)"
[2025-06-03 17:34:10] ID="centos"
[2025-06-03 17:34:10] ID_LIKE="rhel fedora"
[2025-06-03 17:34:10] VERSION_ID="7"
[2025-06-03 17:34:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:34:10] ANSI_COLOR="0;31"
[2025-06-03 17:34:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:34:10] HOME_URL="https://www.centos.org/"
[2025-06-03 17:34:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:34:10] 
[2025-06-03 17:34:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:34:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:34:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:34:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:34:10] 
[2025-06-03 17:34:10] 2025-06-03 15:16:03,745 | INFO     | **************************************
[2025-06-03 17:34:10] 2025-06-03 15:16:04,248 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 17:34:10] 2025-06-03 15:16:04,575 | INFO     | sufficient remaining disk space (496275292160 B)
[2025-06-03 17:34:10] 2025-06-03 15:16:04,575 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:34:10] 2025-06-03 15:16:04,575 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:34:10] 2025-06-03 15:16:04,575 | INFO     | update_server=False
[2025-06-03 17:34:10] 2025-06-03 15:16:04,576 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:34:10] 2025-06-03 15:16:04,576 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:34:10] 2025-06-03 15:16:04,576 | INFO     | aborting loop
[2025-06-03 17:34:10] 2025-06-03 15:16:04,579 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:34:10] 2025-06-03 15:16:04,579 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:34:10] 2025-06-03 15:16:04,763 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:34:10] 2025-06-03 15:16:04,764 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:34:10] 2025-06-03 15:16:04,764 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:34:10] 2025-06-03 15:16:05,074 | INFO     | all data control threads have been joined
[2025-06-03 17:34:10] 2025-06-03 15:16:05,369 | INFO     | all payload control threads have been joined
[2025-06-03 17:34:10] 2025-06-03 15:16:05,375 | INFO     | all job control threads have been joined
[2025-06-03 17:34:10] 2025-06-03 15:16:05,583 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:34:10] 2025-06-03 15:16:05,584 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:34:10] 2025-06-03 15:16:05,615 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:34:10] 2025-06-03 15:16:05,841 | INFO     | [job] validate thread has finished
[2025-06-03 17:34:10] 2025-06-03 15:16:05,899 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:34:10] 2025-06-03 15:16:06,079 | INFO     | [data] control thread has finished
[2025-06-03 17:34:10] 2025-06-03 15:16:06,149 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:34:10] 2025-06-03 15:16:06,243 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:34:10] 2025-06-03 15:16:06,365 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:34:10] 2025-06-03 15:16:06,375 | INFO     | [payload] control thread has finished
[2025-06-03 17:34:10] 2025-06-03 15:16:06,381 | INFO     | [job] control thread has finished
[2025-06-03 17:34:10] 2025-06-03 15:16:06,587 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:34:10] 2025-06-03 15:16:06,728 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:34:10] 2025-06-03 15:16:06,755 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:34:10] 2025-06-03 15:16:06,905 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:34:10] 2025-06-03 15:16:06,973 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:34:10] 2025-06-03 15:16:08,589 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:34:10] 2025-06-03 15:16:08,820 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139705887713088)>', '<ExcThread(monitor, started 139705144305408)>']
[2025-06-03 17:34:10] 2025-06-03 15:16:09,793 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:34:10] 2025-06-03 15:16:09,793 | INFO     | [monitor] control thread has ended
[2025-06-03 17:34:10] 2025-06-03 15:16:13,846 | INFO     | all workflow threads have been joined
[2025-06-03 17:34:10] 2025-06-03 15:16:13,846 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:34:10] 2025-06-03 15:16:13,847 | INFO     | traces error code: 0
[2025-06-03 17:34:10] 2025-06-03 15:16:13,847 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:34:10] 2025-06-03 15:16:14,167 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:34:10] 2025-06-03 15:16:14,310 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:34:10] 2025-06-03 15:16:14,413 [wrapper] pilotpid: 13795
[2025-06-03 17:34:10] 2025-06-03 15:16:14,518 [wrapper] Pilot exit status: 0
[2025-06-03 17:34:10] 2025-06-03 15:16:14,905 [wrapper] pandaids: 6677421023
[2025-06-03 17:34:10] 2025-06-03 15:16:15,678 [wrapper] cleanup supervisor_pilot  1168 13796
[2025-06-03 17:34:10] 2025-06-03 15:16:15,688 [wrapper] Test setup, not cleaning
[2025-06-03 17:34:10] 2025-06-03 15:16:15,747 [wrapper] apfmon messages muted
[2025-06-03 17:34:10] 2025-06-03 15:16:15,787 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:34:10] 2025-06-03 15:16:15,839 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:34:10]  *** Error codes and diagnostics ***
[2025-06-03 17:34:10]     "exeErrorCode": 0,
[2025-06-03 17:34:10]     "exeErrorDiag": "",
[2025-06-03 17:34:10]     "pilotErrorCode": 0,
[2025-06-03 17:34:10]     "pilotErrorDiag": "",
[2025-06-03 17:34:10]  *** Listing of results directory ***
[2025-06-03 17:34:10] total 389828
[2025-06-03 17:34:10] -rw-r--r--. 1 boinc boinc    495897 Jun  3 01:50 pilot3.tar.gz
[2025-06-03 17:34:10] -rw-r--r--. 1 boinc boinc      5111 Jun  3 02:17 queuedata.json
[2025-06-03 17:34:10] -rwx------. 1 boinc boinc     37140 Jun  3 02:18 runpilot2-wrapper.sh
[2025-06-03 17:34:10] -rw-r--r--. 1 boinc boinc       100 Jun  3 13:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:34:10] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 13:22 run_atlas
[2025-06-03 17:34:10] -rw-r--r--. 1 boinc boinc       105 Jun  3 13:22 job.xml
[2025-06-03 17:34:10] -rw-r--r--. 2 boinc boinc 215652368 Jun  3 13:22 EVNT.45006593._000601.pool.root.1
[2025-06-03 17:34:10] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:22 start_atlas.sh
[2025-06-03 17:34:10] drwxrwx--x. 2 boinc boinc        68 Jun  3 13:22 shared
[2025-06-03 17:34:10] -rw-r--r--. 2 boinc boinc    508881 Jun  3 13:22 input.tar.gz
[2025-06-03 17:34:10] -rw-r--r--. 1 boinc boinc      6392 Jun  3 13:22 init_data.xml
[2025-06-03 17:34:10] -rw-r--r--. 1 boinc boinc         0 Jun  3 13:22 boinc_lockfile
[2025-06-03 17:34:10] -rw-r--r--. 1 boinc boinc      2523 Jun  3 13:26 pandaJob.out
[2025-06-03 17:34:10] -rw-------. 1 boinc boinc    982666 Jun  3 13:29 agis_schedconf.cvmfs.json
[2025-06-03 17:34:10] drwx------. 4 boinc boinc      4096 Jun  3 13:29 pilot3
[2025-06-03 17:34:10] -rw-------. 1 boinc boinc 176638628 Jun  3 17:13 HITS.45006595._015014.pool.root.1
[2025-06-03 17:34:10] -rw-r--r--. 1 boinc boinc       531 Jun  3 17:13 boinc_task_state.xml
[2025-06-03 17:34:10] -rw-------. 1 boinc boinc      1016 Jun  3 17:14 memory_monitor_summary.json
[2025-06-03 17:34:10] -rw-------. 1 boinc boinc   1603667 Jun  3 17:14 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:34:10] -rw-------. 1 boinc boinc    378448 Jun  3 17:14 log.45006595._015014.job.log.tgz.1
[2025-06-03 17:34:10] -rw-------. 1 boinc boinc        95 Jun  3 17:15 pilot_heartbeat.json
[2025-06-03 17:34:10] -rw-------. 1 boinc boinc      7692 Jun  3 17:16 heartbeat.json
[2025-06-03 17:34:10] -rw-------. 1 boinc boinc      4416 Jun  3 17:16 pilotlog.txt
[2025-06-03 17:34:10] -rw-------. 1 boinc boinc   1162092 Jun  3 17:16 log.45006595._015014.job.log.1
[2025-06-03 17:34:10] -rw-------. 1 boinc boinc       357 Jun  3 17:16 output.list
[2025-06-03 17:34:10] -rw-r--r--. 1 boinc boinc       620 Jun  3 17:16 runtime_log
[2025-06-03 17:34:10] -rw-------. 1 boinc boinc   1556480 Jun  3 17:16 result.tar.gz
[2025-06-03 17:34:10] -rw-r--r--. 1 boinc boinc      8659 Jun  3 17:16 runtime_log.err
[2025-06-03 17:34:10] -rw-------. 1 boinc boinc       656 Jun  3 17:16 cSEMDmMXUg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmGvWKDmO5wQ6n.diag
[2025-06-03 17:34:10] -rw-r--r--. 1 boinc boinc      8192 Jun  3 17:34 boinc_mmap_file
[2025-06-03 17:34:10] -rw-r--r--. 1 boinc boinc        28 Jun  3 17:34 wrapper_checkpoint.txt
[2025-06-03 17:34:10] -rw-r--r--. 1 boinc boinc     20524 Jun  3 17:34 stderr.txt
[2025-06-03 17:34:10] HITS file was successfully produced:
[2025-06-03 17:34:10] -rw-------. 1 boinc boinc 176638628 Jun  3 17:13 shared/HITS.pool.root.1
[2025-06-03 17:34:10]  *** Contents of shared directory: ***
[2025-06-03 17:34:10] total 385136
[2025-06-03 17:34:10] -rw-r--r--. 2 boinc boinc 215652368 Jun  3 13:22 ATLAS.root_0
[2025-06-03 17:34:10] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:22 start_atlas.sh
[2025-06-03 17:34:10] -rw-r--r--. 2 boinc boinc    508881 Jun  3 13:22 input.tar.gz
[2025-06-03 17:34:10] -rw-------. 1 boinc boinc 176638628 Jun  3 17:13 HITS.pool.root.1
[2025-06-03 17:34:10] -rw-------. 1 boinc boinc   1556480 Jun  3 17:16 result.tar.gz
17:34:12 (3664): run_atlas exited; CPU time 48908.049468
17:34:12 (3664): called boinc_finish(0)

</stderr_txt>
]]>

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