Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:49:53 (29022): wrapper (7.7.26015): starting
11:49:53 (29022): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:49:53] Arguments: --nthreads 8
[2025-06-03 11:49:53] Threads: 8
[2025-06-03 11:49:53] Checking for CVMFS
[2025-06-03 11:49:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:49:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:49:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:49:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:49:56] 2.11.2.0 6477 31625 93472 146737 1 16 21934642 25165824 4251 130560 0 16028660 99.844 17393769 1842 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 11:49:56] CVMFS is ok
[2025-06-03 11:49:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:49:56] Checking for apptainer binary...
[2025-06-03 11:49:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:49:56] Running /usr/bin/apptainer --version
[2025-06-03 11:49:56] apptainer version 1.3.2-1.el7
[2025-06-03 11:49:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:18:30] cg-vwn261.simple-grid.lan
[2025-06-03 12:18:30] apptainer works
[2025-06-03 12:18:30] Set ATHENA_PROC_NUMBER=8
[2025-06-03 12:18:30] Set ATHENA_CORE_NUMBER=8
[2025-06-03 12:18:30] Starting ATLAS job with PandaID=6677381951
[2025-06-03 12:18:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:58:50]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:58:50] 2025-06-03 13:58:36,138 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:58:50] 2025-06-03 13:58:36,138 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:58:50] 2025-06-03 13:58:36,138 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:58:50] 2025-06-03 13:58:36,143 | INFO     | fitting pss+swap vs Time
[2025-06-03 15:58:50] 2025-06-03 13:58:36,144 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 15:58:50] 2025-06-03 13:58:36,146 | INFO     | sum of deviations: -40277901243.0
[2025-06-03 15:58:50] 2025-06-03 13:58:36,146 | INFO     | mean x: 1748952678.0
[2025-06-03 15:58:50] 2025-06-03 13:58:36,146 | INFO     | mean y: 2516436.028436019
[2025-06-03 15:58:50] 2025-06-03 13:58:36,146 | INFO     | -- intersect: 24186556663.945137
[2025-06-03 15:58:50] 2025-06-03 13:58:36,146 | INFO     | intersect: 24186556663.945137
[2025-06-03 15:58:50] 2025-06-03 13:58:36,147 | INFO     | chi2: 2.5923552381545174
[2025-06-03 15:58:50] 2025-06-03 13:58:36,147 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 15:58:50] 2025-06-03 13:58:36,149 | INFO     | sum of deviations: -25055401263.00001
[2025-06-03 15:58:50] 2025-06-03 13:58:36,149 | INFO     | mean x: 1748952525.5
[2025-06-03 15:58:50] 2025-06-03 13:58:36,149 | INFO     | mean y: 2527716.2524271845
[2025-06-03 15:58:50] 2025-06-03 13:58:36,149 | INFO     | -- intersect: 16168786719.05428
[2025-06-03 15:58:50] 2025-06-03 13:58:36,149 | INFO     | intersect: 16168786719.05428
[2025-06-03 15:58:50] 2025-06-03 13:58:36,150 | INFO     | chi2: 1.8297037030742915
[2025-06-03 15:58:50] 2025-06-03 13:58:36,150 | INFO     | current chi2=1.8297037030742915 (change=29.419252572157244 %)
[2025-06-03 15:58:50] 2025-06-03 13:58:36,150 | INFO     | sum of square deviations: 2518000700.0
[2025-06-03 15:58:50] 2025-06-03 13:58:36,152 | INFO     | sum of deviations: -23908187560.99999
[2025-06-03 15:58:50] 2025-06-03 13:58:36,152 | INFO     | mean x: 1748952373.0
[2025-06-03 15:58:50] 2025-06-03 13:58:36,152 | INFO     | mean y: 2528624.6666666665
[2025-06-03 15:58:50] 2025-06-03 13:58:36,152 | INFO     | -- intersect: 16608672288.145397
[2025-06-03 15:58:50] 2025-06-03 13:58:36,152 | INFO     | intersect: 16608672288.145397
[2025-06-03 15:58:50] 2025-06-03 13:58:36,153 | INFO     | chi2: 1.8280113945490122
[2025-06-03 15:58:50] 2025-06-03 13:58:36,153 | INFO     | current chi2=1.8280113945490122 (change=0.09249085097417209 %)
[2025-06-03 15:58:50] 2025-06-03 13:58:36,153 | INFO     | right removable region: 200
[2025-06-03 15:58:50] 2025-06-03 13:58:36,153 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 15:58:50] 2025-06-03 13:58:36,155 | INFO     | sum of deviations: -75705420822.5
[2025-06-03 15:58:50] 2025-06-03 13:58:36,155 | INFO     | mean x: 1748952830.5
[2025-06-03 15:58:50] 2025-06-03 13:58:36,155 | INFO     | mean y: 2542911.0436893203
[2025-06-03 15:58:50] 2025-06-03 13:58:36,156 | INFO     | -- intersect: 48849242331.95372
[2025-06-03 15:58:50] 2025-06-03 13:58:36,156 | INFO     | intersect: 48849242331.95372
[2025-06-03 15:58:50] 2025-06-03 13:58:36,156 | INFO     | chi2: 1.009404962693184
[2025-06-03 15:58:50] 2025-06-03 13:58:36,156 | INFO     | current chi2=1.009404962693184 (change=61.06224379141134 %)
[2025-06-03 15:58:50] 2025-06-03 13:58:36,156 | INFO     | sum of square deviations: 2518000700.0
[2025-06-03 15:58:50] 2025-06-03 13:58:36,158 | INFO     | sum of deviations: -74154238616.00002
[2025-06-03 15:58:50] 2025-06-03 13:58:36,158 | INFO     | mean x: 1748952983.0
[2025-06-03 15:58:50] 2025-06-03 13:58:36,158 | INFO     | mean y: 2541642.5323383086
[2025-06-03 15:58:50] 2025-06-03 13:58:36,158 | INFO     | -- intersect: 51508594372.99704
[2025-06-03 15:58:50] 2025-06-03 13:58:36,158 | INFO     | intersect: 51508594372.99704
[2025-06-03 15:58:50] 2025-06-03 13:58:36,159 | INFO     | chi2: 0.9907686774831013
[2025-06-03 15:58:50] 2025-06-03 13:58:36,159 | INFO     | current chi2=0.9907686774831013 (change=1.8462644725224513 %)
[2025-06-03 15:58:50] 2025-06-03 13:58:36,159 | INFO     | left removable region: 20
[2025-06-03 15:58:50] 2025-06-03 13:58:36,159 | INFO     | sum of square deviations: 1808350185.0
[2025-06-03 15:58:50] 2025-06-03 13:58:36,161 | INFO     | sum of deviations: -45964718322.5
[2025-06-03 15:58:50] 2025-06-03 13:58:36,161 | INFO     | mean x: 1748952952.5
[2025-06-03 15:58:50] 2025-06-03 13:58:36,161 | INFO     | mean y: 2545903.3833333333
[2025-06-03 15:58:50] 2025-06-03 13:58:36,161 | INFO     | -- intersect: 44457502961.91744
[2025-06-03 15:58:50] 2025-06-03 13:58:36,161 | INFO     | intersect: 44457502961.91744
[2025-06-03 15:58:50] 2025-06-03 13:58:36,161 | INFO     | chi2: 0.1895347987954385
[2025-06-03 15:58:50] 2025-06-03 13:58:36,162 | INFO     | -- intersect: 44457502961.91744
[2025-06-03 15:58:50] 2025-06-03 13:58:36,162 | INFO     | current memory leak: -25.42 B/s (using 180 data points, chi2=0.19)
[2025-06-03 15:58:50] 2025-06-03 13:58:36,163 | INFO     | ..............................
[2025-06-03 15:58:50] 2025-06-03 13:58:36,163 | INFO     | . Timing measurements:
[2025-06-03 15:58:50] 2025-06-03 13:58:36,163 | INFO     | . get job = 0 s
[2025-06-03 15:58:50] 2025-06-03 13:58:36,163 | INFO     | . initial setup = 10 s
[2025-06-03 15:58:50] 2025-06-03 13:58:36,163 | INFO     | . payload setup = 17 s
[2025-06-03 15:58:50] 2025-06-03 13:58:36,163 | INFO     | . stage-in = 0 s
[2025-06-03 15:58:50] 2025-06-03 13:58:36,163 | INFO     | . payload execution = 12847 s
[2025-06-03 15:58:50] 2025-06-03 13:58:36,163 | INFO     | . stage-out = 2 s
[2025-06-03 15:58:50] 2025-06-03 13:58:36,163 | INFO     | . log creation = 0 s
[2025-06-03 15:58:50] 2025-06-03 13:58:36,163 | INFO     | ..............................
[2025-06-03 15:58:50] 2025-06-03 13:58:36,492 | INFO     | 
[2025-06-03 15:58:50] 2025-06-03 13:58:36,493 | INFO     | job summary report
[2025-06-03 15:58:50] 2025-06-03 13:58:36,493 | INFO     | --------------------------------------------------
[2025-06-03 15:58:50] 2025-06-03 13:58:36,493 | INFO     | PanDA job id: 6677381951
[2025-06-03 15:58:50] 2025-06-03 13:58:36,493 | INFO     | task id: 45006595
[2025-06-03 15:58:50] 2025-06-03 13:58:36,493 | INFO     | errors: (none)
[2025-06-03 15:58:50] 2025-06-03 13:58:36,493 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:58:50] 2025-06-03 13:58:36,493 | INFO     | pilot state: finished 
[2025-06-03 15:58:50] 2025-06-03 13:58:36,493 | INFO     | transexitcode: 0
[2025-06-03 15:58:50] 2025-06-03 13:58:36,493 | INFO     | exeerrorcode: 0
[2025-06-03 15:58:50] 2025-06-03 13:58:36,493 | INFO     | exeerrordiag: 
[2025-06-03 15:58:50] 2025-06-03 13:58:36,494 | INFO     | exitcode: 0
[2025-06-03 15:58:50] 2025-06-03 13:58:36,494 | INFO     | exitmsg: OK
[2025-06-03 15:58:50] 2025-06-03 13:58:36,494 | INFO     | cpuconsumptiontime: 47858 s
[2025-06-03 15:58:50] 2025-06-03 13:58:36,494 | INFO     | nevents: 400
[2025-06-03 15:58:50] 2025-06-03 13:58:36,494 | INFO     | neventsw: 0
[2025-06-03 15:58:50] 2025-06-03 13:58:36,494 | INFO     | pid: 28647
[2025-06-03 15:58:50] 2025-06-03 13:58:36,494 | INFO     | pgrp: 28647
[2025-06-03 15:58:50] 2025-06-03 13:58:36,494 | INFO     | corecount: 8
[2025-06-03 15:58:50] 2025-06-03 13:58:36,494 | INFO     | event service: False
[2025-06-03 15:58:50] 2025-06-03 13:58:36,494 | INFO     | sizes: {0: 2404350, 1: 2405035, 2: 2405234, 13: 2405234, 24: 2405290, 34: 2405318, 45: 2405474, 56: 2405502, 67: 2405530, 77: 2405558, 88: 2405614, 89: 2406128, 99
[2025-06-03 15:58:50] 2025-06-03 13:58:36,495 | INFO     | --------------------------------------------------
[2025-06-03 15:58:50] 2025-06-03 13:58:36,495 | INFO     | 
[2025-06-03 15:58:50] 2025-06-03 13:58:36,495 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 15:58:50] 2025-06-03 13:58:36,541 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:58:50] 2025-06-03 13:58:36,542 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:58:50] 2025-06-03 13:58:36,542 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:58:50] 2025-06-03 13:58:36,542 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:58:50] 2025-06-03 13:58:36,542 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:58:50] 2025-06-03 13:58:36,542 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:58:50] 2025-06-03 13:58:36,542 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:58:50] 2025-06-03 13:58:36,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:58:50] 2025-06-03 13:58:36,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:58:50] 2025-06-03 13:58:36,543 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:58:50] 2025-06-03 13:58:36,543 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:58:50] 2025-06-03 13:58:36,543 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:58:50] 2025-06-03 13:58:36,543 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:58:50] 2025-06-03 13:58:36,543 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:58:50] 2025-06-03 13:58:36,543 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:58:50] 2025-06-03 13:58:36,543 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:58:50] 2025-06-03 13:58:36,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:58:50] 2025-06-03 13:58:36,544 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:58:50] 2025-06-03 13:58:36,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:58:50] 2025-06-03 13:58:36,544 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:58:50] 2025-06-03 13:58:36,545 | INFO     | job 6677381951 has completed (purged errors)
[2025-06-03 15:58:50] 2025-06-03 13:58:36,545 | INFO     | overall cleanup function is called
[2025-06-03 15:58:50] 2025-06-03 13:58:37,555 | INFO     | --- collectZombieJob: --- 10, [28647]
[2025-06-03 15:58:50] 2025-06-03 13:58:37,556 | INFO     | zombie collector waiting for pid 28647
[2025-06-03 15:58:50] 2025-06-03 13:58:37,556 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:58:50] 2025-06-03 13:58:37,556 | INFO     | collected zombie processes
[2025-06-03 15:58:50] 2025-06-03 13:58:37,556 | INFO     | will attempt to kill all subprocesses of pid=28647
[2025-06-03 15:58:50] 2025-06-03 13:58:37,658 | INFO     | process IDs to be killed: [28647] (in reverse order)
[2025-06-03 15:58:50] 2025-06-03 13:58:37,737 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:58:50] 2025-06-03 13:58:37,737 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:58:50] 2025-06-03 13:58:37,741 | INFO     | did not find any defunct processes belonging to 28647
[2025-06-03 15:58:50] 2025-06-03 13:58:37,746 | INFO     | did not find any defunct processes belonging to 28647
[2025-06-03 15:58:50] 2025-06-03 13:58:37,746 | INFO     | ready for new job
[2025-06-03 15:58:50] 2025-06-03 13:58:37,747 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:58:50] 2025-06-03 13:58:37,750 | INFO     | **************************************
[2025-06-03 15:58:50] 2025-06-03 13:58:37,750 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 15:58:50] 2025-06-03 13:58:37,750 | INFO     | **************************************
[2025-06-03 15:58:50] 2025-06-03 13:58:37,750 | INFO     | 
[2025-06-03 15:58:50] 2025-06-03 13:58:37,751 | INFO     | pilot is running in a VM
[2025-06-03 15:58:50] 2025-06-03 13:58:37,751 | INFO     | architecture information:
[2025-06-03 15:58:50] 2025-06-03 13:58:37,752 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:58:50] 2025-06-03 13:58:37,843 | INFO     | cat /etc/os-release:
[2025-06-03 15:58:50] NAME="CentOS Linux"
[2025-06-03 15:58:50] VERSION="7 (Core)"
[2025-06-03 15:58:50] ID="centos"
[2025-06-03 15:58:50] ID_LIKE="rhel fedora"
[2025-06-03 15:58:50] VERSION_ID="7"
[2025-06-03 15:58:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:58:50] ANSI_COLOR="0;31"
[2025-06-03 15:58:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:58:50] HOME_URL="https://www.centos.org/"
[2025-06-03 15:58:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:58:50] 
[2025-06-03 15:58:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:58:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:58:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:58:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:58:50] 
[2025-06-03 15:58:50] 2025-06-03 13:58:37,844 | INFO     | **************************************
[2025-06-03 15:58:50] 2025-06-03 13:58:38,120 | INFO     | PID=17332 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-03 15:58:50] 2025-06-03 13:58:38,121 | INFO     | .. there are 9 such processes running
[2025-06-03 15:58:50] 2025-06-03 13:58:38,347 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 15:58:50] 2025-06-03 13:58:38,378 | INFO     | sufficient remaining disk space (497016635392 B)
[2025-06-03 15:58:50] 2025-06-03 13:58:38,378 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:58:50] 2025-06-03 13:58:38,379 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:58:50] 2025-06-03 13:58:38,379 | INFO     | update_server=False
[2025-06-03 15:58:50] 2025-06-03 13:58:38,379 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:58:50] 2025-06-03 13:58:38,379 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 15:58:50] 2025-06-03 13:58:38,380 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:58:50] 2025-06-03 13:58:38,380 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:58:50] 2025-06-03 13:58:38,380 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:58:50] 2025-06-03 13:58:38,381 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:58:50] 2025-06-03 13:58:38,381 | INFO     | aborting loop
[2025-06-03 15:58:50] 2025-06-03 13:58:38,381 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:58:50] 2025-06-03 13:58:39,029 | INFO     | all data control threads have been joined
[2025-06-03 15:58:50] 2025-06-03 13:58:39,032 | INFO     | all job control threads have been joined
[2025-06-03 15:58:50] 2025-06-03 13:58:39,251 | INFO     | all payload control threads have been joined
[2025-06-03 15:58:50] 2025-06-03 13:58:39,383 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:58:50] 2025-06-03 13:58:39,386 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:58:50] 2025-06-03 13:58:40,028 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:58:50] 2025-06-03 13:58:40,034 | INFO     | [data] control thread has finished
[2025-06-03 15:58:50] 2025-06-03 13:58:40,038 | INFO     | [job] control thread has finished
[2025-06-03 15:58:50] 2025-06-03 13:58:40,145 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:58:50] 2025-06-03 13:58:40,257 | INFO     | [payload] control thread has finished
[2025-06-03 15:58:50] 2025-06-03 13:58:40,317 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:58:50] 2025-06-03 13:58:40,387 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:58:50] 2025-06-03 13:58:40,423 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:58:50] 2025-06-03 13:58:40,524 | INFO     | [job] validate thread has finished
[2025-06-03 15:58:50] 2025-06-03 13:58:40,527 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:58:50] 2025-06-03 13:58:40,705 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:58:50] 2025-06-03 13:58:40,787 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:58:50] 2025-06-03 13:58:40,830 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:58:50] 2025-06-03 13:58:41,304 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:58:50] 2025-06-03 13:58:42,310 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:58:50] 2025-06-03 13:58:44,326 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:58:50] 2025-06-03 13:58:44,400 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140325414995776)>', '<ExcThread(monitor, started 140324835948288)>']
[2025-06-03 15:58:50] 2025-06-03 13:58:44,416 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:58:50] 2025-06-03 13:58:44,417 | INFO     | [monitor] control thread has ended
[2025-06-03 15:58:50] 2025-06-03 13:58:49,426 | INFO     | all workflow threads have been joined
[2025-06-03 15:58:50] 2025-06-03 13:58:49,427 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:58:50] 2025-06-03 13:58:49,427 | INFO     | traces error code: 0
[2025-06-03 15:58:50] 2025-06-03 13:58:49,427 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:58:50] 2025-06-03 13:58:49,736 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:58:50] 2025-06-03 13:58:49,796 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:58:50] 2025-06-03 13:58:49,801 [wrapper] pilotpid: 17332
[2025-06-03 15:58:50] 2025-06-03 13:58:49,813 [wrapper] Pilot exit status: 0
[2025-06-03 15:58:50] 2025-06-03 13:58:49,849 [wrapper] pandaids: 6677381951
[2025-06-03 15:58:50] 2025-06-03 13:58:49,903 [wrapper] cleanup supervisor_pilot 28985 17333
[2025-06-03 15:58:50] 2025-06-03 13:58:49,993 [wrapper] Test setup, not cleaning
[2025-06-03 15:58:50] 2025-06-03 13:58:49,999 [wrapper] apfmon messages muted
[2025-06-03 15:58:50] 2025-06-03 13:58:50,009 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:58:50] 2025-06-03 13:58:50,020 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:58:50]  *** Error codes and diagnostics ***
[2025-06-03 15:58:50]     "exeErrorCode": 0,
[2025-06-03 15:58:50]     "exeErrorDiag": "",
[2025-06-03 15:58:50]     "pilotErrorCode": 0,
[2025-06-03 15:58:50]     "pilotErrorDiag": "",
[2025-06-03 15:58:50]  *** Listing of results directory ***
[2025-06-03 15:58:50] total 387016
[2025-06-03 15:58:50] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:59 pilot3.tar.gz
[2025-06-03 15:58:50] -rwx------. 1 boinc boinc     37140 Jun  2 18:02 runpilot2-wrapper.sh
[2025-06-03 15:58:50] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:02 queuedata.json
[2025-06-03 15:58:50] -rw-r--r--. 1 boinc boinc       100 Jun  3 11:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:58:50] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 11:49 run_atlas
[2025-06-03 15:58:50] -rw-r--r--. 1 boinc boinc       105 Jun  3 11:49 job.xml
[2025-06-03 15:58:50] -rw-r--r--. 2 boinc boinc 214226311 Jun  3 11:49 EVNT.45006593._000108.pool.root.1
[2025-06-03 15:58:50] -rw-r--r--. 1 boinc boinc      6391 Jun  3 11:49 init_data.xml
[2025-06-03 15:58:50] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:49 start_atlas.sh
[2025-06-03 15:58:50] drwxrwx--x. 2 boinc boinc        68 Jun  3 11:49 shared
[2025-06-03 15:58:50] -rw-r--r--. 2 boinc boinc    508873 Jun  3 11:49 input.tar.gz
[2025-06-03 15:58:50] -rw-r--r--. 1 boinc boinc         0 Jun  3 11:49 boinc_lockfile
[2025-06-03 15:58:50] -rw-r--r--. 1 boinc boinc      2522 Jun  3 12:18 pandaJob.out
[2025-06-03 15:58:50] -rw-------. 1 boinc boinc    985490 Jun  3 12:21 agis_schedconf.cvmfs.json
[2025-06-03 15:58:50] drwx------. 4 boinc boinc      4096 Jun  3 12:21 pilot3
[2025-06-03 15:58:50] -rw-------. 1 boinc boinc 175224758 Jun  3 15:57 HITS.45006595._002701.pool.root.1
[2025-06-03 15:58:50] -rw-r--r--. 1 boinc boinc       531 Jun  3 15:57 boinc_task_state.xml
[2025-06-03 15:58:50] -rw-------. 1 boinc boinc        95 Jun  3 15:58 pilot_heartbeat.json
[2025-06-03 15:58:50] -rw-------. 1 boinc boinc      1020 Jun  3 15:58 memory_monitor_summary.json
[2025-06-03 15:58:50] -rw-------. 1 boinc boinc   1603667 Jun  3 15:58 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:58:50] -rw-------. 1 boinc boinc    390593 Jun  3 15:58 log.45006595._002701.job.log.tgz.1
[2025-06-03 15:58:50] -rw-r--r--. 1 boinc boinc        28 Jun  3 15:58 wrapper_checkpoint.txt
[2025-06-03 15:58:50] -rw-r--r--. 1 boinc boinc      8192 Jun  3 15:58 boinc_mmap_file
[2025-06-03 15:58:50] -rw-------. 1 boinc boinc      7696 Jun  3 15:58 heartbeat.json
[2025-06-03 15:58:50] -rw-------. 1 boinc boinc      4932 Jun  3 15:58 pilotlog.txt
[2025-06-03 15:58:50] -rw-------. 1 boinc boinc   1122386 Jun  3 15:58 log.45006595._002701.job.log.1
[2025-06-03 15:58:50] -rw-------. 1 boinc boinc       357 Jun  3 15:58 output.list
[2025-06-03 15:58:50] -rw-r--r--. 1 boinc boinc       620 Jun  3 15:58 runtime_log
[2025-06-03 15:58:50] -rw-------. 1 boinc boinc   1536000 Jun  3 15:58 result.tar.gz
[2025-06-03 15:58:50] -rw-r--r--. 1 boinc boinc      8659 Jun  3 15:58 runtime_log.err
[2025-06-03 15:58:50] -rw-------. 1 boinc boinc       656 Jun  3 15:58 8XtNDmonMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmgjVKDm6vjC4n.diag
[2025-06-03 15:58:50] -rw-r--r--. 1 boinc boinc     20621 Jun  3 15:58 stderr.txt
[2025-06-03 15:58:50] HITS file was successfully produced:
[2025-06-03 15:58:50] -rw-------. 1 boinc boinc 175224758 Jun  3 15:57 shared/HITS.pool.root.1
[2025-06-03 15:58:50]  *** Contents of shared directory: ***
[2025-06-03 15:58:50] total 382344
[2025-06-03 15:58:50] -rw-r--r--. 2 boinc boinc 214226311 Jun  3 11:49 ATLAS.root_0
[2025-06-03 15:58:50] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:49 start_atlas.sh
[2025-06-03 15:58:50] -rw-r--r--. 2 boinc boinc    508873 Jun  3 11:49 input.tar.gz
[2025-06-03 15:58:50] -rw-------. 1 boinc boinc 175224758 Jun  3 15:57 HITS.pool.root.1
[2025-06-03 15:58:50] -rw-------. 1 boinc boinc   1536000 Jun  3 15:58 result.tar.gz
15:58:51 (29022): run_atlas exited; CPU time 48025.822077
15:58:51 (29022): called boinc_finish(0)

</stderr_txt>
]]>

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