Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:22:26 (3817693): wrapper (7.7.26015): starting
18:22:26 (3817693): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 18:22:26] Arguments: --nthreads 4
[2025-06-04 18:22:26] Threads: 4
[2025-06-04 18:22:26] Checking for CVMFS
[2025-06-04 18:22:26] No cvmfs_config command found, will try listing directly
[2025-06-04 18:22:26] CVMFS is ok
[2025-06-04 18:22:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 18:22:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 18:22:26] Further information can be found at the LHC@home message board.
[2025-06-04 18:22:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:22:26] Checking for apptainer binary...
[2025-06-04 18:22:26] which: no apptainer in ((null))
[2025-06-04 18:22:26] apptainer is not installed, using version from CVMFS
[2025-06-04 18:22:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:22:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-06-04 18:22:26] apptainer works
[2025-06-04 18:22:27] Set ATHENA_PROC_NUMBER=4
[2025-06-04 18:22:27] Set ATHENA_CORE_NUMBER=4
[2025-06-04 18:22:27] Starting ATLAS job with PandaID=6677420419
[2025-06-04 18:22:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:43:29]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:43:29] 2025-06-04 18:42:33,923 | INFO     | executing command: lscpu
[2025-06-04 20:43:29] 2025-06-04 18:42:34,042 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 20:43:29] 2025-06-04 18:42:35,564 | INFO     | monitor loop #583: job 0:6677420419 is in state 'finished'
[2025-06-04 20:43:29] 2025-06-04 18:42:35,564 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:43:29] 2025-06-04 18:42:38,067 | INFO     | monitor loop #584: job 0:6677420419 is in state 'finished'
[2025-06-04 20:43:29] 2025-06-04 18:42:38,067 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:43:29] 2025-06-04 18:42:40,406 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 20:43:29] 2025-06-04 18:42:40,407 | INFO     | using path: /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6677420419/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 20:43:29] 2025-06-04 18:42:40,408 | INFO     | extracted standard info from prmon json
[2025-06-04 20:43:29] 2025-06-04 18:42:40,408 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 20:43:29] 2025-06-04 18:42:40,408 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 20:43:29] 2025-06-04 18:42:40,409 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 20:43:29] 2025-06-04 18:42:40,409 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 20:43:29] 2025-06-04 18:42:40,412 | INFO     | fitting pss+swap vs Time
[2025-06-04 20:43:29] 2025-06-04 18:42:40,412 | INFO     | sum of square deviations: 797291228.0
[2025-06-04 20:43:29] 2025-06-04 18:42:40,413 | INFO     | sum of deviations: 8686635277.000002
[2025-06-04 20:43:29] 2025-06-04 18:42:40,413 | INFO     | mean x: 1749058345.0
[2025-06-04 20:43:29] 2025-06-04 18:42:40,413 | INFO     | mean y: 2319105.0802919706
[2025-06-04 20:43:29] 2025-06-04 18:42:40,413 | INFO     | -- intersect: -19053994808.36996
[2025-06-04 20:43:29] 2025-06-04 18:42:40,413 | INFO     | intersect: -19053994808.36996
[2025-06-04 20:43:29] 2025-06-04 18:42:40,413 | INFO     | chi2: 1.518445491294499
[2025-06-04 20:43:29] 2025-06-04 18:42:40,414 | INFO     | sum of square deviations: 713140813.0
[2025-06-04 20:43:29] 2025-06-04 18:42:40,414 | INFO     | sum of deviations: 8535998918.499999
[2025-06-04 20:43:29] 2025-06-04 18:42:40,414 | INFO     | mean x: 1749058192.5
[2025-06-04 20:43:29] 2025-06-04 18:42:40,414 | INFO     | mean y: 2318831.8863636362
[2025-06-04 20:43:29] 2025-06-04 18:42:40,414 | INFO     | -- intersect: -20933180255.267357
[2025-06-04 20:43:29] 2025-06-04 18:42:40,415 | INFO     | intersect: -20933180255.267357
[2025-06-04 20:43:29] 2025-06-04 18:42:40,415 | INFO     | chi2: 1.5205453138711613
[2025-06-04 20:43:29] 2025-06-04 18:42:40,415 | INFO     | current chi2=1.5205453138711613 (change=-0.13828764935593976 %)
[2025-06-04 20:43:29] 2025-06-04 18:42:40,415 | INFO     | right removable region: 131
[2025-06-04 20:43:29] 2025-06-04 18:42:40,415 | INFO     | sum of square deviations: 713140813.0
[2025-06-04 20:43:29] 2025-06-04 18:42:40,416 | INFO     | sum of deviations: -10405136701.500004
[2025-06-04 20:43:29] 2025-06-04 18:42:40,416 | INFO     | mean x: 1749058497.5
[2025-06-04 20:43:29] 2025-06-04 18:42:40,416 | INFO     | mean y: 2353084.053030303
[2025-06-04 20:43:29] 2025-06-04 18:42:40,416 | INFO     | -- intersect: 25522127627.38393
[2025-06-04 20:43:29] 2025-06-04 18:42:40,416 | INFO     | intersect: 25522127627.38393
[2025-06-04 20:43:29] 2025-06-04 18:42:40,416 | INFO     | chi2: 0.01799327206242227
[2025-06-04 20:43:29] 2025-06-04 18:42:40,417 | INFO     | current chi2=0.01799327206242227 (change=98.81502021866568 %)
[2025-06-04 20:43:29] 2025-06-04 18:42:40,417 | INFO     | sum of square deviations: 635130048.0
[2025-06-04 20:43:29] 2025-06-04 18:42:40,417 | INFO     | sum of deviations: -9691024859.999994
[2025-06-04 20:43:29] 2025-06-04 18:42:40,417 | INFO     | mean x: 1749058650.0
[2025-06-04 20:43:29] 2025-06-04 18:42:40,418 | INFO     | mean y: 2351660.7874015747
[2025-06-04 20:43:29] 2025-06-04 18:42:40,418 | INFO     | -- intersect: 26690068471.105953
[2025-06-04 20:43:29] 2025-06-04 18:42:40,418 | INFO     | intersect: 26690068471.105953
[2025-06-04 20:43:29] 2025-06-04 18:42:40,418 | INFO     | chi2: 0.01654995984069159
[2025-06-04 20:43:29] 2025-06-04 18:42:40,418 | INFO     | current chi2=0.01654995984069159 (change=8.02139942487137 %)
[2025-06-04 20:43:29] 2025-06-04 18:42:40,418 | INFO     | left removable region: 20
[2025-06-04 20:43:29] 2025-06-04 18:42:40,418 | INFO     | sum of square deviations: 424045160.0
[2025-06-04 20:43:29] 2025-06-04 18:42:40,419 | INFO     | sum of deviations: -5712643534.000006
[2025-06-04 20:43:29] 2025-06-04 18:42:40,419 | INFO     | mean x: 1749058772.0
[2025-06-04 20:43:29] 2025-06-04 18:42:40,419 | INFO     | mean y: 2344602.4234234234
[2025-06-04 20:43:29] 2025-06-04 18:42:40,419 | INFO     | -- intersect: 23565281352.96148
[2025-06-04 20:43:29] 2025-06-04 18:42:40,419 | INFO     | intersect: 23565281352.96148
[2025-06-04 20:43:29] 2025-06-04 18:42:40,419 | INFO     | chi2: 0.011749478475856587
[2025-06-04 20:43:29] 2025-06-04 18:42:40,420 | INFO     | -- intersect: 23565281352.96148
[2025-06-04 20:43:29] 2025-06-04 18:42:40,420 | INFO     | current memory leak: -13.47 B/s (using 111 data points, chi2=0.01)
[2025-06-04 20:43:29] 2025-06-04 18:42:40,420 | INFO     | ..............................
[2025-06-04 20:43:29] 2025-06-04 18:42:40,420 | INFO     | . Timing measurements:
[2025-06-04 20:43:29] 2025-06-04 18:42:40,420 | INFO     | . get job = 0 s
[2025-06-04 20:43:29] 2025-06-04 18:42:40,420 | INFO     | . initial setup = 1 s
[2025-06-04 20:43:29] 2025-06-04 18:42:40,420 | INFO     | . payload setup = 10 s
[2025-06-04 20:43:29] 2025-06-04 18:42:40,421 | INFO     | . stage-in = 0 s
[2025-06-04 20:43:29] 2025-06-04 18:42:40,421 | INFO     | . payload execution = 8355 s
[2025-06-04 20:43:29] 2025-06-04 18:42:40,421 | INFO     | . stage-out = 0 s
[2025-06-04 20:43:29] 2025-06-04 18:42:40,421 | INFO     | . log creation = 0 s
[2025-06-04 20:43:29] 2025-06-04 18:42:40,421 | INFO     | ..............................
[2025-06-04 20:43:29] 2025-06-04 18:42:40,765 | INFO     | 
[2025-06-04 20:43:29] 2025-06-04 18:42:40,766 | INFO     | job summary report
[2025-06-04 20:43:29] 2025-06-04 18:42:40,766 | INFO     | --------------------------------------------------
[2025-06-04 20:43:29] 2025-06-04 18:42:40,766 | INFO     | PanDA job id: 6677420419
[2025-06-04 20:43:29] 2025-06-04 18:42:40,766 | INFO     | task id: 45006595
[2025-06-04 20:43:29] 2025-06-04 18:42:40,766 | INFO     | errors: (none)
[2025-06-04 20:43:29] 2025-06-04 18:42:40,766 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:43:29] 2025-06-04 18:42:40,766 | INFO     | pilot state: finished 
[2025-06-04 20:43:29] 2025-06-04 18:42:40,766 | INFO     | transexitcode: 0
[2025-06-04 20:43:29] 2025-06-04 18:42:40,766 | INFO     | exeerrorcode: 0
[2025-06-04 20:43:29] 2025-06-04 18:42:40,766 | INFO     | exeerrordiag: 
[2025-06-04 20:43:29] 2025-06-04 18:42:40,766 | INFO     | exitcode: 0
[2025-06-04 20:43:29] 2025-06-04 18:42:40,767 | INFO     | exitmsg: OK
[2025-06-04 20:43:29] 2025-06-04 18:42:40,767 | INFO     | cpuconsumptiontime: 31433 s
[2025-06-04 20:43:29] 2025-06-04 18:42:40,767 | INFO     | nevents: 400
[2025-06-04 20:43:29] 2025-06-04 18:42:40,767 | INFO     | neventsw: 0
[2025-06-04 20:43:29] 2025-06-04 18:42:40,767 | INFO     | pid: 3829373
[2025-06-04 20:43:29] 2025-06-04 18:42:40,767 | INFO     | pgrp: 3829373
[2025-06-04 20:43:29] 2025-06-04 18:42:40,767 | INFO     | corecount: 4
[2025-06-04 20:43:29] 2025-06-04 18:42:40,767 | INFO     | event service: False
[2025-06-04 20:43:29] 2025-06-04 18:42:40,767 | INFO     | sizes: {0: 2397129, 1: 2397328, 8: 2397534, 12: 2397562, 8370: 2425659, 8372: 2434622, 8373: 2434806, 8382: 2434976}
[2025-06-04 20:43:29] 2025-06-04 18:42:40,767 | INFO     | --------------------------------------------------
[2025-06-04 20:43:29] 2025-06-04 18:42:40,767 | INFO     | 
[2025-06-04 20:43:29] 2025-06-04 18:42:40,767 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/0
[2025-06-04 20:43:29] 2025-06-04 18:42:40,797 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:43:29] 2025-06-04 18:42:40,797 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:43:29] 2025-06-04 18:42:40,797 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:43:29] 2025-06-04 18:42:40,797 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:43:29] 2025-06-04 18:42:40,797 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:43:29] 2025-06-04 18:42:40,798 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:43:29] 2025-06-04 18:42:40,798 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:43:29] 2025-06-04 18:42:40,798 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:43:29] 2025-06-04 18:42:40,798 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:43:29] 2025-06-04 18:42:40,798 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:43:29] 2025-06-04 18:42:40,798 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:43:29] 2025-06-04 18:42:40,798 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:43:29] 2025-06-04 18:42:40,798 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:43:29] 2025-06-04 18:42:40,798 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:43:29] 2025-06-04 18:42:40,798 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:43:29] 2025-06-04 18:42:40,798 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:43:29] 2025-06-04 18:42:40,798 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:43:29] 2025-06-04 18:42:40,798 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:43:29] 2025-06-04 18:42:40,799 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:43:29] 2025-06-04 18:42:40,799 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:43:29] 2025-06-04 18:42:40,799 | INFO     | job 6677420419 has completed (purged errors)
[2025-06-04 20:43:29] 2025-06-04 18:42:40,799 | INFO     | overall cleanup function is called
[2025-06-04 20:43:29] 2025-06-04 18:42:41,808 | INFO     | --- collectZombieJob: --- 10, [3829373]
[2025-06-04 20:43:29] 2025-06-04 18:42:41,808 | INFO     | zombie collector waiting for pid 3829373
[2025-06-04 20:43:29] 2025-06-04 18:42:41,808 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:43:29] 2025-06-04 18:42:41,808 | INFO     | collected zombie processes
[2025-06-04 20:43:29] 2025-06-04 18:42:41,808 | INFO     | will attempt to kill all subprocesses of pid=3829373
[2025-06-04 20:43:29] 2025-06-04 18:42:42,467 | INFO     | process IDs to be killed: [3829373] (in reverse order)
[2025-06-04 20:43:29] 2025-06-04 18:42:42,710 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:43:29] 2025-06-04 18:42:42,711 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:43:29] 2025-06-04 18:42:42,780 | INFO     | did not find any defunct processes belonging to 3829373
[2025-06-04 20:43:29] 2025-06-04 18:42:42,848 | INFO     | did not find any defunct processes belonging to 3829373
[2025-06-04 20:43:29] 2025-06-04 18:42:42,849 | INFO     | ready for new job
[2025-06-04 20:43:29] 2025-06-04 18:42:42,849 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:43:29] 2025-06-04 18:42:42,851 | INFO     | **************************************
[2025-06-04 20:43:29] 2025-06-04 18:42:42,851 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:43:29] 2025-06-04 18:42:42,851 | INFO     | **************************************
[2025-06-04 20:43:29] 2025-06-04 18:42:42,851 | INFO     | 
[2025-06-04 20:43:29] 2025-06-04 18:42:42,862 | INFO     | architecture information:
[2025-06-04 20:43:29] 2025-06-04 18:42:42,863 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:43:29] 2025-06-04 18:42:42,890 | INFO     | cat /etc/os-release:
[2025-06-04 20:43:29] NAME="CentOS Linux"
[2025-06-04 20:43:29] VERSION="7 (Core)"
[2025-06-04 20:43:29] ID="centos"
[2025-06-04 20:43:29] ID_LIKE="rhel fedora"
[2025-06-04 20:43:29] VERSION_ID="7"
[2025-06-04 20:43:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:43:29] ANSI_COLOR="0;31"
[2025-06-04 20:43:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:43:29] HOME_URL="https://www.centos.org/"
[2025-06-04 20:43:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:43:29] 
[2025-06-04 20:43:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:43:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:43:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:43:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:43:29] 
[2025-06-04 20:43:29] 2025-06-04 18:42:42,890 | INFO     | **************************************
[2025-06-04 20:43:29] 2025-06-04 18:42:43,393 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/0
[2025-06-04 20:43:29] 2025-06-04 18:42:43,420 | INFO     | sufficient remaining disk space (3251213697024 B)
[2025-06-04 20:43:29] 2025-06-04 18:42:43,421 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:43:29] 2025-06-04 18:42:43,421 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:43:29] 2025-06-04 18:42:43,421 | INFO     | update_server=False
[2025-06-04 20:43:29] 2025-06-04 18:42:43,421 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:43:29] 2025-06-04 18:42:43,449 | INFO     | all job control threads have been joined
[2025-06-04 20:43:29] 2025-06-04 18:42:43,493 | INFO     | PID=3821595 has CPU usage=19.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 20:43:29] 2025-06-04 18:42:43,493 | INFO     | .. there are 14 such processes running
[2025-06-04 20:43:29] 2025-06-04 18:42:43,493 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:43:29] 2025-06-04 18:42:43,494 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:43:29] 2025-06-04 18:42:43,494 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:43:29] 2025-06-04 18:42:43,559 | INFO     | all payload control threads have been joined
[2025-06-04 20:43:29] 2025-06-04 18:42:43,665 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:43:29] 2025-06-04 18:42:43,818 | INFO     | all data control threads have been joined
[2025-06-04 20:43:29] 2025-06-04 18:42:44,078 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:43:29] 2025-06-04 18:42:44,078 | INFO     | aborting loop
[2025-06-04 20:43:29] 2025-06-04 18:42:44,426 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:43:29] 2025-06-04 18:42:44,454 | INFO     | [job] control thread has finished
[2025-06-04 20:43:29] 2025-06-04 18:42:44,565 | INFO     | [payload] control thread has finished
[2025-06-04 20:43:29] 2025-06-04 18:42:44,690 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:43:29] 2025-06-04 18:42:44,801 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:43:29] 2025-06-04 18:42:44,823 | INFO     | [data] control thread has finished
[2025-06-04 20:43:29] 2025-06-04 18:42:44,881 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:43:29] 2025-06-04 18:42:44,897 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:43:29] 2025-06-04 18:42:44,952 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:43:29] 2025-06-04 18:42:45,008 | INFO     | [job] validate thread has finished
[2025-06-04 20:43:29] 2025-06-04 18:42:45,083 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:43:29] 2025-06-04 18:42:45,523 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:43:29] 2025-06-04 18:42:45,676 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:43:29] 2025-06-04 18:42:45,794 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:43:29] 2025-06-04 18:42:45,915 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:43:29] 2025-06-04 18:42:46,528 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:43:29] 2025-06-04 18:42:46,675 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:43:29] 2025-06-04 18:42:50,681 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:43:29] 2025-06-04 18:42:52,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23431657334592)>', '<ExcThread(monitor, started 23431416342272)>']
[2025-06-04 20:43:29] 2025-06-04 18:42:52,539 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:43:29] 2025-06-04 18:42:52,539 | INFO     | [monitor] control thread has ended
[2025-06-04 20:43:29] 2025-06-04 18:42:57,067 | INFO     | all workflow threads have been joined
[2025-06-04 20:43:29] 2025-06-04 18:42:57,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:43:29] 2025-06-04 18:42:57,067 | INFO     | traces error code: 0
[2025-06-04 20:43:29] 2025-06-04 18:42:57,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:43:29] 2025-06-04 18:42:57,222 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:43:29] 2025-06-04 18:42:57,226 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:43:29] 2025-06-04 18:42:57,229 [wrapper] pilotpid: 3821595
[2025-06-04 20:43:29] 2025-06-04 18:42:57,234 [wrapper] Pilot exit status: 0
[2025-06-04 20:43:29] 2025-06-04 18:42:57,262 [wrapper] pandaids: 6677420419
[2025-06-04 20:43:29] 2025-06-04 18:42:57,416 [wrapper] cleanup supervisor_pilot  102090 3821596
[2025-06-04 20:43:29] 2025-06-04 18:42:57,420 [wrapper] Test setup, not cleaning
[2025-06-04 20:43:29] 2025-06-04 18:42:57,423 [wrapper] apfmon messages muted
[2025-06-04 20:43:29] 2025-06-04 18:42:57,428 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:43:29] 2025-06-04 18:42:57,432 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:43:29]  *** Error codes and diagnostics ***
[2025-06-04 20:43:29]     "exeErrorCode": 0,
[2025-06-04 20:43:29]     "exeErrorDiag": "",
[2025-06-04 20:43:29]     "pilotErrorCode": 0,
[2025-06-04 20:43:29]     "pilotErrorDiag": "",
[2025-06-04 20:43:29]  *** Listing of results directory ***
[2025-06-04 20:43:29] total 393212
[2025-06-04 20:43:29] -rw-r--r-- 1 boinc boinc    495897 Jun  3 01:50 pilot3.tar.gz
[2025-06-04 20:43:29] -rwx------ 1 boinc boinc     37140 Jun  3 01:54 runpilot2-wrapper.sh
[2025-06-04 20:43:29] -rw-r--r-- 1 boinc boinc      5111 Jun  3 01:54 queuedata.json
[2025-06-04 20:43:29] -rw-r--r-- 1 boinc boinc       100 Jun  4 18:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:43:29] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 18:22 run_atlas
[2025-06-04 20:43:29] -rw-r--r-- 1 boinc boinc       105 Jun  4 18:22 job.xml
[2025-06-04 20:43:29] -rw-r--r-- 1 boinc boinc      6685 Jun  4 18:22 init_data.xml
[2025-06-04 20:43:29] -rw-r--r-- 2 boinc boinc 216264999 Jun  4 18:22 EVNT.45006593._000589.pool.root.1
[2025-06-04 20:43:29] -rw-r--r-- 2 boinc boinc     15093 Jun  4 18:22 start_atlas.sh
[2025-06-04 20:43:29] drwxrwx--x 2 boinc boinc      4096 Jun  4 18:22 shared
[2025-06-04 20:43:29] -rw-r--r-- 2 boinc boinc    508870 Jun  4 18:22 input.tar.gz
[2025-06-04 20:43:29] -rw-r--r-- 1 boinc boinc         0 Jun  4 18:22 boinc_lockfile
[2025-06-04 20:43:29] -rw-r--r-- 1 boinc boinc      2523 Jun  4 18:22 pandaJob.out
[2025-06-04 20:43:29] -rw------- 1 boinc boinc    990984 Jun  4 18:22 agis_schedconf.cvmfs.json
[2025-06-04 20:43:29] -rw------- 1 boinc boinc   1598969 Jun  4 18:22 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:43:29] drwx------ 4 boinc boinc      4096 Jun  4 18:22 pilot3
[2025-06-04 20:43:29] -rw------- 1 boinc boinc 180414784 Jun  4 20:42 HITS.45006595._014712.pool.root.1
[2025-06-04 20:43:29] -rw-r--r-- 1 boinc boinc       528 Jun  4 20:42 boinc_task_state.xml
[2025-06-04 20:43:29] -rw------- 1 boinc boinc        95 Jun  4 20:42 pilot_heartbeat.json
[2025-06-04 20:43:29] -rw------- 1 boinc boinc      1030 Jun  4 20:42 memory_monitor_summary.json
[2025-06-04 20:43:29] -rw------- 1 boinc boinc    275645 Jun  4 20:42 log.45006595._014712.job.log.tgz.1
[2025-06-04 20:43:29] -rw------- 1 boinc boinc      7699 Jun  4 20:42 heartbeat.json
[2025-06-04 20:43:29] -rw------- 1 boinc boinc      4760 Jun  4 20:42 pilotlog.txt
[2025-06-04 20:43:29] -rw------- 1 boinc boinc    789327 Jun  4 20:42 log.45006595._014712.job.log.1
[2025-06-04 20:43:29] -rw------- 1 boinc boinc       357 Jun  4 20:42 output.list
[2025-06-04 20:43:29] -rw-r--r-- 1 boinc boinc       620 Jun  4 20:42 runtime_log
[2025-06-04 20:43:29] -rw------- 1 boinc boinc   1085440 Jun  4 20:42 result.tar.gz
[2025-06-04 20:43:29] -rw-r--r-- 1 boinc boinc      9025 Jun  4 20:42 runtime_log.err
[2025-06-04 20:43:29] -rw------- 1 boinc boinc       663 Jun  4 20:42 aIpKDmHAUg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmmtWKDm2MaFKm.diag
[2025-06-04 20:43:29] -rw-r--r-- 1 boinc boinc        26 Jun  4 20:43 wrapper_checkpoint.txt
[2025-06-04 20:43:29] -rw-r--r-- 1 boinc boinc      8192 Jun  4 20:43 boinc_mmap_file
[2025-06-04 20:43:29] -rw-r--r-- 1 boinc boinc     21011 Jun  4 20:43 stderr.txt
[2025-06-04 20:43:29] HITS file was successfully produced:
[2025-06-04 20:43:29] -rw------- 1 boinc boinc 180414784 Jun  4 20:42 shared/HITS.pool.root.1
[2025-06-04 20:43:29]  *** Contents of shared directory: ***
[2025-06-04 20:43:29] total 388972
[2025-06-04 20:43:29] -rw-r--r-- 2 boinc boinc 216264999 Jun  4 18:22 ATLAS.root_0
[2025-06-04 20:43:29] -rw-r--r-- 2 boinc boinc     15093 Jun  4 18:22 start_atlas.sh
[2025-06-04 20:43:29] -rw-r--r-- 2 boinc boinc    508870 Jun  4 18:22 input.tar.gz
[2025-06-04 20:43:29] -rw------- 1 boinc boinc 180414784 Jun  4 20:42 HITS.pool.root.1
[2025-06-04 20:43:29] -rw------- 1 boinc boinc   1085440 Jun  4 20:42 result.tar.gz
20:43:31 (3817693): run_atlas exited; CPU time 31909.975135
20:43:31 (3817693): called boinc_finish(0)

</stderr_txt>
]]>

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