Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:48:15 (2827198): wrapper (7.7.26015): starting
13:48:15 (2827198): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 13:48:15] Arguments: --nthreads 4
[2025-06-04 13:48:15] Threads: 4
[2025-06-04 13:48:15] Checking for CVMFS
[2025-06-04 13:48:15] No cvmfs_config command found, will try listing directly
[2025-06-04 13:48:15] CVMFS is ok
[2025-06-04 13:48:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 13:48:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 13:48:15] Further information can be found at the LHC@home message board.
[2025-06-04 13:48:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:48:15] Checking for apptainer binary...
[2025-06-04 13:48:15] which: no apptainer in ((null))
[2025-06-04 13:48:15] apptainer is not installed, using version from CVMFS
[2025-06-04 13:48:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:48:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-06-04 13:48:15] apptainer works
[2025-06-04 13:48:15] Set ATHENA_PROC_NUMBER=4
[2025-06-04 13:48:15] Set ATHENA_CORE_NUMBER=4
[2025-06-04 13:48:15] Starting ATLAS job with PandaID=6677419947
[2025-06-04 13:48:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:03:46]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:03:46] 2025-06-04 14:03:22,623 | INFO     | maximum number of monitored processes: 6
[2025-06-04 16:03:46] 2025-06-04 14:03:25,127 | INFO     | monitor loop #560: job 0:6677419947 is in state 'finished'
[2025-06-04 16:03:46] 2025-06-04 14:03:25,127 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:03:46] 2025-06-04 14:03:26,644 [wrapper] supervise_pilot (15 min periods counter: 10)
[2025-06-04 16:03:46] 2025-06-04 14:03:27,632 | INFO     | monitor loop #561: job 0:6677419947 is in state 'finished'
[2025-06-04 16:03:46] 2025-06-04 14:03:27,632 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:03:46] 2025-06-04 14:03:29,297 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 16:03:46] 2025-06-04 14:03:29,298 | INFO     | using path: /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6677419947/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:03:46] 2025-06-04 14:03:29,298 | INFO     | extracted standard info from prmon json
[2025-06-04 16:03:46] 2025-06-04 14:03:29,298 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:03:46] 2025-06-04 14:03:29,299 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:03:46] 2025-06-04 14:03:29,299 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:03:46] 2025-06-04 14:03:29,299 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:03:46] 2025-06-04 14:03:29,301 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:03:46] 2025-06-04 14:03:29,302 | INFO     | sum of square deviations: 713140813.0
[2025-06-04 16:03:46] 2025-06-04 14:03:29,302 | INFO     | sum of deviations: 10400039206.000002
[2025-06-04 16:03:46] 2025-06-04 14:03:29,303 | INFO     | mean x: 1749041741.5
[2025-06-04 16:03:46] 2025-06-04 14:03:29,303 | INFO     | mean y: 2304920.4393939395
[2025-06-04 16:03:46] 2025-06-04 14:03:29,303 | INFO     | -- intersect: -25504723078.71471
[2025-06-04 16:03:46] 2025-06-04 14:03:29,303 | INFO     | intersect: -25504723078.71471
[2025-06-04 16:03:46] 2025-06-04 14:03:29,303 | INFO     | chi2: 1.5488510385432048
[2025-06-04 16:03:46] 2025-06-04 14:03:29,303 | INFO     | sum of square deviations: 635130048.0
[2025-06-04 16:03:46] 2025-06-04 14:03:29,304 | INFO     | sum of deviations: 9968389480.999998
[2025-06-04 16:03:46] 2025-06-04 14:03:29,304 | INFO     | mean x: 1749041589.0
[2025-06-04 16:03:46] 2025-06-04 14:03:29,304 | INFO     | mean y: 2304076.2598425196
[2025-06-04 16:03:46] 2025-06-04 14:03:29,304 | INFO     | -- intersect: -27448968041.193375
[2025-06-04 16:03:46] 2025-06-04 14:03:29,304 | INFO     | intersect: -27448968041.193375
[2025-06-04 16:03:46] 2025-06-04 14:03:29,304 | INFO     | chi2: 1.5511995648029786
[2025-06-04 16:03:46] 2025-06-04 14:03:29,305 | INFO     | current chi2=1.5511995648029786 (change=-0.15163022145646216 %)
[2025-06-04 16:03:46] 2025-06-04 14:03:29,305 | INFO     | right removable region: 126
[2025-06-04 16:03:46] 2025-06-04 14:03:29,305 | INFO     | sum of square deviations: 635130048.0
[2025-06-04 16:03:46] 2025-06-04 14:03:29,305 | INFO     | sum of deviations: -7874577047.0
[2025-06-04 16:03:46] 2025-06-04 14:03:29,306 | INFO     | mean x: 1749041894.0
[2025-06-04 16:03:46] 2025-06-04 14:03:29,306 | INFO     | mean y: 2339976.05511811
[2025-06-04 16:03:46] 2025-06-04 14:03:29,306 | INFO     | -- intersect: 21687607735.161057
[2025-06-04 16:03:46] 2025-06-04 14:03:29,306 | INFO     | intersect: 21687607735.161057
[2025-06-04 16:03:46] 2025-06-04 14:03:29,306 | INFO     | chi2: 0.044452649823011246
[2025-06-04 16:03:46] 2025-06-04 14:03:29,306 | INFO     | current chi2=0.044452649823011246 (change=97.1299596464214 %)
[2025-06-04 16:03:46] 2025-06-04 14:03:29,306 | INFO     | sum of square deviations: 563026370.5
[2025-06-04 16:03:46] 2025-06-04 14:03:29,307 | INFO     | sum of deviations: -5106155731.000006
[2025-06-04 16:03:46] 2025-06-04 14:03:29,307 | INFO     | mean x: 1749042046.5
[2025-06-04 16:03:46] 2025-06-04 14:03:29,307 | INFO     | mean y: 2334105.704918033
[2025-06-04 16:03:46] 2025-06-04 14:03:29,307 | INFO     | -- intersect: 15864612566.240993
[2025-06-04 16:03:46] 2025-06-04 14:03:29,307 | INFO     | intersect: 15864612566.240993
[2025-06-04 16:03:46] 2025-06-04 14:03:29,308 | INFO     | chi2: 0.03472361801243081
[2025-06-04 16:03:46] 2025-06-04 14:03:29,308 | INFO     | current chi2=0.03472361801243081 (change=21.88628090635022 %)
[2025-06-04 16:03:46] 2025-06-04 14:03:29,308 | INFO     | left removable region: 20
[2025-06-04 16:03:46] 2025-06-04 14:03:29,308 | INFO     | sum of square deviations: 369281342.5
[2025-06-04 16:03:46] 2025-06-04 14:03:29,308 | INFO     | sum of deviations: -409375087.0000001
[2025-06-04 16:03:46] 2025-06-04 14:03:29,309 | INFO     | mean x: 1749042168.5
[2025-06-04 16:03:46] 2025-06-04 14:03:29,309 | INFO     | mean y: 2322630.2264150945
[2025-06-04 16:03:46] 2025-06-04 14:03:29,309 | INFO     | -- intersect: 1941262423.5260358
[2025-06-04 16:03:46] 2025-06-04 14:03:29,309 | INFO     | intersect: 1941262423.5260358
[2025-06-04 16:03:46] 2025-06-04 14:03:29,309 | INFO     | chi2: 0.008266584244829936
[2025-06-04 16:03:46] 2025-06-04 14:03:29,309 | INFO     | -- intersect: 1941262423.5260358
[2025-06-04 16:03:46] 2025-06-04 14:03:29,309 | INFO     | current memory leak: -1.11 B/s (using 106 data points, chi2=0.01)
[2025-06-04 16:03:46] 2025-06-04 14:03:29,310 | INFO     | ..............................
[2025-06-04 16:03:46] 2025-06-04 14:03:29,310 | INFO     | . Timing measurements:
[2025-06-04 16:03:46] 2025-06-04 14:03:29,310 | INFO     | . get job = 0 s
[2025-06-04 16:03:46] 2025-06-04 14:03:29,310 | INFO     | . initial setup = 1 s
[2025-06-04 16:03:46] 2025-06-04 14:03:29,310 | INFO     | . payload setup = 10 s
[2025-06-04 16:03:46] 2025-06-04 14:03:29,310 | INFO     | . stage-in = 0 s
[2025-06-04 16:03:46] 2025-06-04 14:03:29,310 | INFO     | . payload execution = 8058 s
[2025-06-04 16:03:46] 2025-06-04 14:03:29,310 | INFO     | . stage-out = 0 s
[2025-06-04 16:03:46] 2025-06-04 14:03:29,310 | INFO     | . log creation = 0 s
[2025-06-04 16:03:46] 2025-06-04 14:03:29,310 | INFO     | ..............................
[2025-06-04 16:03:46] 2025-06-04 14:03:29,399 | INFO     | 
[2025-06-04 16:03:46] 2025-06-04 14:03:29,399 | INFO     | job summary report
[2025-06-04 16:03:46] 2025-06-04 14:03:29,399 | INFO     | --------------------------------------------------
[2025-06-04 16:03:46] 2025-06-04 14:03:29,400 | INFO     | PanDA job id: 6677419947
[2025-06-04 16:03:46] 2025-06-04 14:03:29,400 | INFO     | task id: 45006595
[2025-06-04 16:03:46] 2025-06-04 14:03:29,400 | INFO     | errors: (none)
[2025-06-04 16:03:46] 2025-06-04 14:03:29,400 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:03:46] 2025-06-04 14:03:29,400 | INFO     | pilot state: finished 
[2025-06-04 16:03:46] 2025-06-04 14:03:29,400 | INFO     | transexitcode: 0
[2025-06-04 16:03:46] 2025-06-04 14:03:29,400 | INFO     | exeerrorcode: 0
[2025-06-04 16:03:46] 2025-06-04 14:03:29,400 | INFO     | exeerrordiag: 
[2025-06-04 16:03:46] 2025-06-04 14:03:29,400 | INFO     | exitcode: 0
[2025-06-04 16:03:46] 2025-06-04 14:03:29,400 | INFO     | exitmsg: OK
[2025-06-04 16:03:46] 2025-06-04 14:03:29,400 | INFO     | cpuconsumptiontime: 30547 s
[2025-06-04 16:03:46] 2025-06-04 14:03:29,400 | INFO     | nevents: 400
[2025-06-04 16:03:46] 2025-06-04 14:03:29,400 | INFO     | neventsw: 0
[2025-06-04 16:03:46] 2025-06-04 14:03:29,400 | INFO     | pid: 2838625
[2025-06-04 16:03:46] 2025-06-04 14:03:29,401 | INFO     | pgrp: 2838625
[2025-06-04 16:03:46] 2025-06-04 14:03:29,401 | INFO     | corecount: 4
[2025-06-04 16:03:46] 2025-06-04 14:03:29,401 | INFO     | event service: False
[2025-06-04 16:03:46] 2025-06-04 14:03:29,401 | INFO     | sizes: {0: 2397180, 1: 2397379, 8: 2397585, 11: 2397613, 8072: 2425598, 8073: 2434561, 8075: 2434745, 8082: 2434915}
[2025-06-04 16:03:46] 2025-06-04 14:03:29,401 | INFO     | --------------------------------------------------
[2025-06-04 16:03:46] 2025-06-04 14:03:29,401 | INFO     | 
[2025-06-04 16:03:46] 2025-06-04 14:03:29,401 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/0
[2025-06-04 16:03:46] 2025-06-04 14:03:29,432 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:03:46] 2025-06-04 14:03:29,433 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:03:46] 2025-06-04 14:03:29,433 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:03:46] 2025-06-04 14:03:29,433 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:03:46] 2025-06-04 14:03:29,433 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:03:46] 2025-06-04 14:03:29,433 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:03:46] 2025-06-04 14:03:29,433 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:03:46] 2025-06-04 14:03:29,433 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:03:46] 2025-06-04 14:03:29,433 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:03:46] 2025-06-04 14:03:29,433 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:03:46] 2025-06-04 14:03:29,433 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:03:46] 2025-06-04 14:03:29,434 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:03:46] 2025-06-04 14:03:29,434 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:03:46] 2025-06-04 14:03:29,434 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:03:46] 2025-06-04 14:03:29,434 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:03:46] 2025-06-04 14:03:29,434 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:03:46] 2025-06-04 14:03:29,434 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:03:46] 2025-06-04 14:03:29,434 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:03:46] 2025-06-04 14:03:29,434 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:03:46] 2025-06-04 14:03:29,434 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:03:46] 2025-06-04 14:03:29,434 | INFO     | job 6677419947 has completed (purged errors)
[2025-06-04 16:03:46] 2025-06-04 14:03:29,434 | INFO     | overall cleanup function is called
[2025-06-04 16:03:46] 2025-06-04 14:03:30,445 | INFO     | --- collectZombieJob: --- 10, [2838625]
[2025-06-04 16:03:46] 2025-06-04 14:03:30,448 | INFO     | zombie collector waiting for pid 2838625
[2025-06-04 16:03:46] 2025-06-04 14:03:30,448 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:03:46] 2025-06-04 14:03:30,448 | INFO     | collected zombie processes
[2025-06-04 16:03:46] 2025-06-04 14:03:30,448 | INFO     | will attempt to kill all subprocesses of pid=2838625
[2025-06-04 16:03:46] 2025-06-04 14:03:31,785 | INFO     | PID=2831138 has CPU usage=20.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 16:03:46] 2025-06-04 14:03:31,785 | INFO     | .. there are 14 such processes running
[2025-06-04 16:03:46] 2025-06-04 14:03:32,011 | INFO     | process IDs to be killed: [2838625] (in reverse order)
[2025-06-04 16:03:46] 2025-06-04 14:03:32,268 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:03:46] 2025-06-04 14:03:32,269 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:03:46] 2025-06-04 14:03:32,298 | INFO     | did not find any defunct processes belonging to 2838625
[2025-06-04 16:03:46] 2025-06-04 14:03:32,323 | INFO     | did not find any defunct processes belonging to 2838625
[2025-06-04 16:03:46] 2025-06-04 14:03:32,323 | INFO     | ready for new job
[2025-06-04 16:03:46] 2025-06-04 14:03:32,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:03:46] 2025-06-04 14:03:32,326 | INFO     | **************************************
[2025-06-04 16:03:46] 2025-06-04 14:03:32,326 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:03:46] 2025-06-04 14:03:32,326 | INFO     | **************************************
[2025-06-04 16:03:46] 2025-06-04 14:03:32,326 | INFO     | 
[2025-06-04 16:03:46] 2025-06-04 14:03:32,334 | INFO     | architecture information:
[2025-06-04 16:03:46] 2025-06-04 14:03:32,335 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:03:46] 2025-06-04 14:03:32,358 | INFO     | cat /etc/os-release:
[2025-06-04 16:03:46] NAME="CentOS Linux"
[2025-06-04 16:03:46] VERSION="7 (Core)"
[2025-06-04 16:03:46] ID="centos"
[2025-06-04 16:03:46] ID_LIKE="rhel fedora"
[2025-06-04 16:03:46] VERSION_ID="7"
[2025-06-04 16:03:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:03:46] ANSI_COLOR="0;31"
[2025-06-04 16:03:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:03:46] HOME_URL="https://www.centos.org/"
[2025-06-04 16:03:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:03:46] 
[2025-06-04 16:03:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:03:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:03:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:03:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:03:46] 
[2025-06-04 16:03:46] 2025-06-04 14:03:32,359 | INFO     | **************************************
[2025-06-04 16:03:46] 2025-06-04 14:03:32,862 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/0
[2025-06-04 16:03:46] 2025-06-04 14:03:32,889 | INFO     | sufficient remaining disk space (3247038267392 B)
[2025-06-04 16:03:46] 2025-06-04 14:03:32,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:03:46] 2025-06-04 14:03:32,890 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:03:46] 2025-06-04 14:03:32,890 | INFO     | update_server=False
[2025-06-04 16:03:46] 2025-06-04 14:03:32,890 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:03:46] 2025-06-04 14:03:32,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:03:46] 2025-06-04 14:03:33,654 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:03:46] 2025-06-04 14:03:33,654 | INFO     | aborting loop
[2025-06-04 16:03:46] 2025-06-04 14:03:33,694 | INFO     | all payload control threads have been joined
[2025-06-04 16:03:46] 2025-06-04 14:03:33,695 | INFO     | all data control threads have been joined
[2025-06-04 16:03:46] 2025-06-04 14:03:33,695 | INFO     | all job control threads have been joined
[2025-06-04 16:03:46] 2025-06-04 14:03:33,793 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:03:46] 2025-06-04 14:03:33,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:03:46] 2025-06-04 14:03:33,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:03:46] 2025-06-04 14:03:33,895 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:03:46] 2025-06-04 14:03:33,952 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:03:46] 2025-06-04 14:03:33,955 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:03:46] 2025-06-04 14:03:34,026 | INFO     | [job] validate thread has finished
[2025-06-04 16:03:46] 2025-06-04 14:03:34,082 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:03:46] 2025-06-04 14:03:34,350 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:03:46] 2025-06-04 14:03:34,414 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:03:46] 2025-06-04 14:03:34,544 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:03:46] 2025-06-04 14:03:34,546 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:03:46] 2025-06-04 14:03:34,603 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:03:46] 2025-06-04 14:03:34,659 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:03:46] 2025-06-04 14:03:34,699 | INFO     | [payload] control thread has finished
[2025-06-04 16:03:46] 2025-06-04 14:03:34,700 | INFO     | [job] control thread has finished
[2025-06-04 16:03:46] 2025-06-04 14:03:34,701 | INFO     | [data] control thread has finished
[2025-06-04 16:03:46] 2025-06-04 14:03:35,363 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:03:46] 2025-06-04 14:03:35,419 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:03:46] 2025-06-04 14:03:36,087 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:03:46] 2025-06-04 14:03:36,896 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:03:46] 2025-06-04 14:03:37,467 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22562101688128)>', '<ExcThread(monitor, started 22561656125184)>']
[2025-06-04 16:03:46] 2025-06-04 14:03:37,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:03:46] 2025-06-04 14:03:37,813 | INFO     | [monitor] control thread has ended
[2025-06-04 16:03:46] 2025-06-04 14:03:42,492 | INFO     | all workflow threads have been joined
[2025-06-04 16:03:46] 2025-06-04 14:03:42,492 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:03:46] 2025-06-04 14:03:42,492 | INFO     | traces error code: 0
[2025-06-04 16:03:46] 2025-06-04 14:03:42,493 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:03:46] 2025-06-04 14:03:42,668 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:03:46] 2025-06-04 14:03:42,673 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:03:46] 2025-06-04 14:03:42,677 [wrapper] pilotpid: 2831138
[2025-06-04 16:03:46] 2025-06-04 14:03:42,681 [wrapper] Pilot exit status: 0
[2025-06-04 16:03:46] 2025-06-04 14:03:42,698 [wrapper] pandaids: 6677419947
[2025-06-04 16:03:46] 2025-06-04 14:03:42,855 [wrapper] cleanup supervisor_pilot 3301070 2831139
[2025-06-04 16:03:46] 2025-06-04 14:03:42,859 [wrapper] Test setup, not cleaning
[2025-06-04 16:03:46] 2025-06-04 14:03:42,864 [wrapper] apfmon messages muted
[2025-06-04 16:03:46] 2025-06-04 14:03:42,868 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:03:46] 2025-06-04 14:03:42,872 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:03:46]  *** Error codes and diagnostics ***
[2025-06-04 16:03:46]     "exeErrorCode": 0,
[2025-06-04 16:03:46]     "exeErrorDiag": "",
[2025-06-04 16:03:46]     "pilotErrorCode": 0,
[2025-06-04 16:03:46]     "pilotErrorDiag": "",
[2025-06-04 16:03:46]  *** Listing of results directory ***
[2025-06-04 16:03:46] total 387796
[2025-06-04 16:03:46] -rw-r--r-- 1 boinc boinc    495897 Jun  3 01:21 pilot3.tar.gz
[2025-06-04 16:03:46] -rwx------ 1 boinc boinc     37140 Jun  3 01:44 runpilot2-wrapper.sh
[2025-06-04 16:03:46] -rw-r--r-- 1 boinc boinc      5111 Jun  3 01:44 queuedata.json
[2025-06-04 16:03:46] -rw-r--r-- 1 boinc boinc       100 Jun  4 13:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:03:46] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 13:48 run_atlas
[2025-06-04 16:03:46] -rw-r--r-- 1 boinc boinc       105 Jun  4 13:48 job.xml
[2025-06-04 16:03:46] -rw-r--r-- 1 boinc boinc      6685 Jun  4 13:48 init_data.xml
[2025-06-04 16:03:46] -rw-r--r-- 2 boinc boinc 214184980 Jun  4 13:48 EVNT.45006593._000583.pool.root.1
[2025-06-04 16:03:46] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:48 start_atlas.sh
[2025-06-04 16:03:46] drwxrwx--x 2 boinc boinc      4096 Jun  4 13:48 shared
[2025-06-04 16:03:46] -rw-r--r-- 2 boinc boinc    508875 Jun  4 13:48 input.tar.gz
[2025-06-04 16:03:46] -rw-r--r-- 1 boinc boinc         0 Jun  4 13:48 boinc_lockfile
[2025-06-04 16:03:46] -rw-r--r-- 1 boinc boinc      2524 Jun  4 13:48 pandaJob.out
[2025-06-04 16:03:46] -rw------- 1 boinc boinc    986812 Jun  4 13:48 agis_schedconf.cvmfs.json
[2025-06-04 16:03:46] -rw------- 1 boinc boinc   1598969 Jun  4 13:48 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:03:46] drwx------ 4 boinc boinc      4096 Jun  4 13:48 pilot3
[2025-06-04 16:03:46] -rw------- 1 boinc boinc 176988379 Jun  4 16:02 HITS.45006595._014572.pool.root.1
[2025-06-04 16:03:46] -rw-r--r-- 1 boinc boinc       528 Jun  4 16:02 boinc_task_state.xml
[2025-06-04 16:03:46] -rw------- 1 boinc boinc        95 Jun  4 16:03 pilot_heartbeat.json
[2025-06-04 16:03:46] -rw------- 1 boinc boinc      1029 Jun  4 16:03 memory_monitor_summary.json
[2025-06-04 16:03:46] -rw------- 1 boinc boinc    284769 Jun  4 16:03 log.45006595._014572.job.log.tgz.1
[2025-06-04 16:03:46] -rw------- 1 boinc boinc      7695 Jun  4 16:03 heartbeat.json
[2025-06-04 16:03:46] -rw------- 1 boinc boinc      4364 Jun  4 16:03 pilotlog.txt
[2025-06-04 16:03:46] -rw------- 1 boinc boinc    762975 Jun  4 16:03 log.45006595._014572.job.log.1
[2025-06-04 16:03:46] -rw-r--r-- 1 boinc boinc        26 Jun  4 16:03 wrapper_checkpoint.txt
[2025-06-04 16:03:46] -rw------- 1 boinc boinc       357 Jun  4 16:03 output.list
[2025-06-04 16:03:46] -rw-r--r-- 1 boinc boinc       620 Jun  4 16:03 runtime_log
[2025-06-04 16:03:46] -rw------- 1 boinc boinc   1064960 Jun  4 16:03 result.tar.gz
[2025-06-04 16:03:46] -rw-r--r-- 1 boinc boinc      9025 Jun  4 16:03 runtime_log.err
[2025-06-04 16:03:46] -rw------- 1 boinc boinc       663 Jun  4 16:03 LepMDms0Tg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0sWKDm6AovWn.diag
[2025-06-04 16:03:46] -rw-r--r-- 1 boinc boinc      8192 Jun  4 16:03 boinc_mmap_file
[2025-06-04 16:03:46] -rw-r--r-- 1 boinc boinc     20905 Jun  4 16:03 stderr.txt
[2025-06-04 16:03:46] HITS file was successfully produced:
[2025-06-04 16:03:46] -rw------- 1 boinc boinc 176988379 Jun  4 16:02 shared/HITS.pool.root.1
[2025-06-04 16:03:46]  *** Contents of shared directory: ***
[2025-06-04 16:03:46] total 383576
[2025-06-04 16:03:46] -rw-r--r-- 2 boinc boinc 214184980 Jun  4 13:48 ATLAS.root_0
[2025-06-04 16:03:46] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:48 start_atlas.sh
[2025-06-04 16:03:46] -rw-r--r-- 2 boinc boinc    508875 Jun  4 13:48 input.tar.gz
[2025-06-04 16:03:46] -rw------- 1 boinc boinc 176988379 Jun  4 16:02 HITS.pool.root.1
[2025-06-04 16:03:46] -rw------- 1 boinc boinc   1064960 Jun  4 16:03 result.tar.gz
16:03:48 (2827198): run_atlas exited; CPU time 31009.379472
16:03:48 (2827198): called boinc_finish(0)

</stderr_txt>
]]>

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