Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:41:32 (4116319): wrapper (7.7.26015): starting
18:41:32 (4116319): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 18:41:32] Arguments: --nthreads 4
[2025-06-04 18:41:32] Threads: 4
[2025-06-04 18:41:32] Checking for CVMFS
[2025-06-04 18:41:32] No cvmfs_config command found, will try listing directly
[2025-06-04 18:41:32] CVMFS is ok
[2025-06-04 18:41:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 18:41:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 18:41:32] Further information can be found at the LHC@home message board.
[2025-06-04 18:41:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:41:32] Checking for apptainer binary...
[2025-06-04 18:41:32] which: no apptainer in ((null))
[2025-06-04 18:41:32] apptainer is not installed, using version from CVMFS
[2025-06-04 18:41:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:41:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-06-04 18:41:32] apptainer works
[2025-06-04 18:41:32] Set ATHENA_PROC_NUMBER=4
[2025-06-04 18:41:32] Set ATHENA_CORE_NUMBER=4
[2025-06-04 18:41:32] Starting ATLAS job with PandaID=6677419657
[2025-06-04 18:41:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:05:13]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:05:13] 2025-06-04 19:04:10,518 | INFO     | -- intersect: -16490087775.57109
[2025-06-04 21:05:13] 2025-06-04 19:04:10,518 | INFO     | intersect: -16490087775.57109
[2025-06-04 21:05:13] 2025-06-04 19:04:10,518 | INFO     | chi2: 2.3883141933582532
[2025-06-04 21:05:13] 2025-06-04 19:04:10,518 | INFO     | sum of square deviations: 762879420.0
[2025-06-04 21:05:13] 2025-06-04 19:04:10,519 | INFO     | sum of deviations: 16353942010.0
[2025-06-04 21:05:13] 2025-06-04 19:04:10,519 | INFO     | mean x: 1749059428.0
[2025-06-04 21:05:13] 2025-06-04 19:04:10,519 | INFO     | mean y: 2301056.6
[2025-06-04 21:05:13] 2025-06-04 19:04:10,519 | INFO     | -- intersect: -37492505734.17143
[2025-06-04 21:05:13] 2025-06-04 19:04:10,519 | INFO     | intersect: -37492505734.17143
[2025-06-04 21:05:13] 2025-06-04 19:04:10,519 | INFO     | chi2: 1.5855358445367356
[2025-06-04 21:05:13] 2025-06-04 19:04:10,520 | INFO     | current chi2=1.5855358445367356 (change=33.61276129639862 %)
[2025-06-04 21:05:13] 2025-06-04 19:04:10,520 | INFO     | sum of square deviations: 681212772.5
[2025-06-04 21:05:13] 2025-06-04 19:04:10,520 | INFO     | sum of deviations: 15745244543.000002
[2025-06-04 21:05:13] 2025-06-04 19:04:10,521 | INFO     | mean x: 1749059275.5
[2025-06-04 21:05:13] 2025-06-04 19:04:10,521 | INFO     | mean y: 2299919.446153846
[2025-06-04 21:05:13] 2025-06-04 19:04:10,521 | INFO     | -- intersect: -40424666697.58085
[2025-06-04 21:05:13] 2025-06-04 19:04:10,521 | INFO     | intersect: -40424666697.58085
[2025-06-04 21:05:13] 2025-06-04 19:04:10,521 | INFO     | chi2: 1.5878263303297262
[2025-06-04 21:05:13] 2025-06-04 19:04:10,521 | INFO     | current chi2=1.5878263303297262 (change=-0.1444613063074499 %)
[2025-06-04 21:05:13] 2025-06-04 19:04:10,521 | INFO     | right removable region: 129
[2025-06-04 21:05:13] 2025-06-04 19:04:10,522 | INFO     | sum of square deviations: 762879420.0
[2025-06-04 21:05:13] 2025-06-04 19:04:10,522 | INFO     | sum of deviations: -12658825774.0
[2025-06-04 21:05:13] 2025-06-04 19:04:10,522 | INFO     | mean x: 1749059733.0
[2025-06-04 21:05:13] 2025-06-04 19:04:10,522 | INFO     | mean y: 2322341.1037037037
[2025-06-04 21:05:13] 2025-06-04 19:04:10,523 | INFO     | -- intersect: 29025313193.794365
[2025-06-04 21:05:13] 2025-06-04 19:04:10,523 | INFO     | intersect: 29025313193.794365
[2025-06-04 21:05:13] 2025-06-04 19:04:10,523 | INFO     | chi2: 0.8430994650933957
[2025-06-04 21:05:13] 2025-06-04 19:04:10,523 | INFO     | current chi2=0.8430994650933957 (change=64.69897187572721 %)
[2025-06-04 21:05:13] 2025-06-04 19:04:10,523 | INFO     | sum of square deviations: 681212772.5
[2025-06-04 21:05:13] 2025-06-04 19:04:10,524 | INFO     | sum of deviations: -11565669509.5
[2025-06-04 21:05:13] 2025-06-04 19:04:10,524 | INFO     | mean x: 1749059885.5
[2025-06-04 21:05:13] 2025-06-04 19:04:10,524 | INFO     | mean y: 2320293.1461538463
[2025-06-04 21:05:13] 2025-06-04 19:04:10,524 | INFO     | -- intersect: 29697959313.210052
[2025-06-04 21:05:13] 2025-06-04 19:04:10,524 | INFO     | intersect: 29697959313.210052
[2025-06-04 21:05:13] 2025-06-04 19:04:10,524 | INFO     | chi2: 0.8435574247942924
[2025-06-04 21:05:13] 2025-06-04 19:04:10,524 | INFO     | current chi2=0.8435574247942924 (change=-0.054318585156017216 %)
[2025-06-04 21:05:13] 2025-06-04 19:04:10,524 | INFO     | left removable region: 20
[2025-06-04 21:05:13] 2025-06-04 19:04:10,525 | INFO     | sum of square deviations: 401533110.0
[2025-06-04 21:05:13] 2025-06-04 19:04:10,525 | INFO     | sum of deviations: -1604068993.0000007
[2025-06-04 21:05:13] 2025-06-04 19:04:10,525 | INFO     | mean x: 1749059855.0
[2025-06-04 21:05:13] 2025-06-04 19:04:10,525 | INFO     | mean y: 2333506.3944954127
[2025-06-04 21:05:13] 2025-06-04 19:04:10,525 | INFO     | -- intersect: 6989584645.67558
[2025-06-04 21:05:13] 2025-06-04 19:04:10,525 | INFO     | intersect: 6989584645.67558
[2025-06-04 21:05:13] 2025-06-04 19:04:10,526 | INFO     | chi2: 0.004280530010793662
[2025-06-04 21:05:13] 2025-06-04 19:04:10,526 | INFO     | -- intersect: 6989584645.67558
[2025-06-04 21:05:13] 2025-06-04 19:04:10,526 | INFO     | current memory leak: -3.99 B/s (using 109 data points, chi2=0.00)
[2025-06-04 21:05:13] 2025-06-04 19:04:10,526 | INFO     | ..............................
[2025-06-04 21:05:13] 2025-06-04 19:04:10,526 | INFO     | . Timing measurements:
[2025-06-04 21:05:13] 2025-06-04 19:04:10,527 | INFO     | . get job = 0 s
[2025-06-04 21:05:13] 2025-06-04 19:04:10,527 | INFO     | . initial setup = 1 s
[2025-06-04 21:05:13] 2025-06-04 19:04:10,527 | INFO     | . payload setup = 9 s
[2025-06-04 21:05:13] 2025-06-04 19:04:10,527 | INFO     | . stage-in = 0 s
[2025-06-04 21:05:13] 2025-06-04 19:04:10,527 | INFO     | . payload execution = 8504 s
[2025-06-04 21:05:13] 2025-06-04 19:04:10,527 | INFO     | . stage-out = 0 s
[2025-06-04 21:05:13] 2025-06-04 19:04:10,527 | INFO     | . log creation = 0 s
[2025-06-04 21:05:13] 2025-06-04 19:04:10,527 | INFO     | ..............................
[2025-06-04 21:05:13] 2025-06-04 19:04:10,528 | INFO     | sufficient remaining disk space (3245189627904 B)
[2025-06-04 21:05:13] 2025-06-04 19:04:10,529 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 21:05:13] 2025-06-04 19:04:10,622 | INFO     | size of work directory /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6677419657: 3202045 B (within 2537553920 B limit)
[2025-06-04 21:05:13] 2025-06-04 19:04:10,622 | INFO     | pfn file=/scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6677419657/HITS.45006595._014327.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 21:05:13] 2025-06-04 19:04:10,622 | INFO     | total size of present files: 0 B (workdir size: 3202045 B)
[2025-06-04 21:05:13] 2025-06-04 19:04:10,623 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6677419657/HITS.45006595._014327.pool.root.1 since it does not exist
[2025-06-04 21:05:13] 2025-06-04 19:04:10,824 | INFO     | 
[2025-06-04 21:05:13] 2025-06-04 19:04:10,824 | INFO     | job summary report
[2025-06-04 21:05:13] 2025-06-04 19:04:10,824 | INFO     | --------------------------------------------------
[2025-06-04 21:05:13] 2025-06-04 19:04:10,824 | INFO     | PanDA job id: 6677419657
[2025-06-04 21:05:13] 2025-06-04 19:04:10,824 | INFO     | task id: 45006595
[2025-06-04 21:05:13] 2025-06-04 19:04:10,825 | INFO     | errors: (none)
[2025-06-04 21:05:13] 2025-06-04 19:04:10,825 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:05:13] 2025-06-04 19:04:10,825 | INFO     | pilot state: finished 
[2025-06-04 21:05:13] 2025-06-04 19:04:10,825 | INFO     | transexitcode: 0
[2025-06-04 21:05:13] 2025-06-04 19:04:10,825 | INFO     | exeerrorcode: 0
[2025-06-04 21:05:13] 2025-06-04 19:04:10,825 | INFO     | exeerrordiag: 
[2025-06-04 21:05:13] 2025-06-04 19:04:10,825 | INFO     | exitcode: 0
[2025-06-04 21:05:13] 2025-06-04 19:04:10,825 | INFO     | exitmsg: OK
[2025-06-04 21:05:13] 2025-06-04 19:04:10,825 | INFO     | cpuconsumptiontime: 32445 s
[2025-06-04 21:05:13] 2025-06-04 19:04:10,825 | INFO     | nevents: 400
[2025-06-04 21:05:13] 2025-06-04 19:04:10,825 | INFO     | neventsw: 0
[2025-06-04 21:05:13] 2025-06-04 19:04:10,825 | INFO     | pid: 4127851
[2025-06-04 21:05:13] 2025-06-04 19:04:10,826 | INFO     | pgrp: 4127851
[2025-06-04 21:05:13] 2025-06-04 19:04:10,826 | INFO     | corecount: 4
[2025-06-04 21:05:13] 2025-06-04 19:04:10,826 | INFO     | event service: False
[2025-06-04 21:05:13] 2025-06-04 19:04:10,826 | INFO     | sizes: {0: 2397181, 1: 2397380, 8: 2397586, 12: 2397614, 8517: 2425768, 8519: 2434733, 8520: 2434917, 8527: 2435087}
[2025-06-04 21:05:13] 2025-06-04 19:04:10,826 | INFO     | --------------------------------------------------
[2025-06-04 21:05:13] 2025-06-04 19:04:10,826 | INFO     | 
[2025-06-04 21:05:13] 2025-06-04 19:04:10,826 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2025-06-04 21:05:13] 2025-06-04 19:04:10,855 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:05:13] 2025-06-04 19:04:10,855 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:05:13] 2025-06-04 19:04:10,856 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:05:13] 2025-06-04 19:04:10,856 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:05:13] 2025-06-04 19:04:10,856 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:05:13] 2025-06-04 19:04:10,856 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:05:13] 2025-06-04 19:04:10,856 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:05:13] 2025-06-04 19:04:10,856 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:05:13] 2025-06-04 19:04:10,856 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:05:13] 2025-06-04 19:04:10,856 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:05:13] 2025-06-04 19:04:10,856 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:05:13] 2025-06-04 19:04:10,856 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:05:13] 2025-06-04 19:04:10,857 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:05:13] 2025-06-04 19:04:10,857 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:05:13] 2025-06-04 19:04:10,857 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:05:13] 2025-06-04 19:04:10,857 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:05:13] 2025-06-04 19:04:10,857 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:05:13] 2025-06-04 19:04:10,857 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:05:13] 2025-06-04 19:04:10,857 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:05:13] 2025-06-04 19:04:10,857 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:05:13] 2025-06-04 19:04:10,857 | INFO     | job 6677419657 has completed (purged errors)
[2025-06-04 21:05:13] 2025-06-04 19:04:10,858 | INFO     | overall cleanup function is called
[2025-06-04 21:05:13] 2025-06-04 19:04:11,294 | INFO     | number of running child processes to parent process 4127851: 1
[2025-06-04 21:05:13] 2025-06-04 19:04:11,297 | INFO     | maximum number of monitored processes: 6
[2025-06-04 21:05:13] 2025-06-04 19:04:11,297 | INFO     | aborting job monitoring since job object (job id=6677419657) has expired
[2025-06-04 21:05:13] 2025-06-04 19:04:11,868 | INFO     | --- collectZombieJob: --- 10, [4127851]
[2025-06-04 21:05:13] 2025-06-04 19:04:11,868 | INFO     | zombie collector waiting for pid 4127851
[2025-06-04 21:05:13] 2025-06-04 19:04:11,868 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:05:13] 2025-06-04 19:04:11,868 | INFO     | collected zombie processes
[2025-06-04 21:05:13] 2025-06-04 19:04:11,868 | INFO     | will attempt to kill all subprocesses of pid=4127851
[2025-06-04 21:05:13] 2025-06-04 19:04:12,537 | INFO     | process IDs to be killed: [4127851] (in reverse order)
[2025-06-04 21:05:13] 2025-06-04 19:04:12,771 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:05:13] 2025-06-04 19:04:12,772 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:05:13] 2025-06-04 19:04:12,797 | INFO     | did not find any defunct processes belonging to 4127851
[2025-06-04 21:05:13] 2025-06-04 19:04:12,825 | INFO     | did not find any defunct processes belonging to 4127851
[2025-06-04 21:05:13] 2025-06-04 19:04:12,825 | INFO     | ready for new job
[2025-06-04 21:05:13] 2025-06-04 19:04:12,825 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:05:13] 2025-06-04 19:04:12,827 | INFO     | **************************************
[2025-06-04 21:05:13] 2025-06-04 19:04:12,827 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:05:13] 2025-06-04 19:04:12,827 | INFO     | **************************************
[2025-06-04 21:05:13] 2025-06-04 19:04:12,828 | INFO     | 
[2025-06-04 21:05:13] 2025-06-04 19:04:12,836 | INFO     | architecture information:
[2025-06-04 21:05:13] 2025-06-04 19:04:12,836 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:05:13] 2025-06-04 19:04:12,862 | INFO     | cat /etc/os-release:
[2025-06-04 21:05:13] NAME="CentOS Linux"
[2025-06-04 21:05:13] VERSION="7 (Core)"
[2025-06-04 21:05:13] ID="centos"
[2025-06-04 21:05:13] ID_LIKE="rhel fedora"
[2025-06-04 21:05:13] VERSION_ID="7"
[2025-06-04 21:05:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:05:13] ANSI_COLOR="0;31"
[2025-06-04 21:05:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:05:13] HOME_URL="https://www.centos.org/"
[2025-06-04 21:05:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:05:13] 
[2025-06-04 21:05:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:05:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:05:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:05:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:05:13] 
[2025-06-04 21:05:13] 2025-06-04 19:04:12,862 | INFO     | **************************************
[2025-06-04 21:05:13] 2025-06-04 19:04:13,365 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2025-06-04 21:05:13] 2025-06-04 19:04:13,390 | INFO     | sufficient remaining disk space (3245191725056 B)
[2025-06-04 21:05:13] 2025-06-04 19:04:13,391 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:05:13] 2025-06-04 19:04:13,391 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:05:13] 2025-06-04 19:04:13,391 | INFO     | update_server=False
[2025-06-04 21:05:13] 2025-06-04 19:04:13,391 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:05:13] 2025-06-04 19:04:13,407 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:05:13] 2025-06-04 19:04:13,800 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 21:05:13] 2025-06-04 19:04:13,800 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 21:05:13] 2025-06-04 19:04:13,800 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:05:13] 2025-06-04 19:04:13,800 | INFO     | will abort loop
[2025-06-04 21:05:13] 2025-06-04 19:04:13,891 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:05:13] 2025-06-04 19:04:13,891 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:05:13] 2025-06-04 19:04:13,891 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:05:13] 2025-06-04 19:04:14,283 | INFO     | all data control threads have been joined
[2025-06-04 21:05:13] 2025-06-04 19:04:14,397 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:05:13] 2025-06-04 19:04:14,410 | INFO     | all payload control threads have been joined
[2025-06-04 21:05:13] 2025-06-04 19:04:14,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:05:13] 2025-06-04 19:04:14,668 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:05:13] 2025-06-04 19:04:14,806 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:05:13] 2025-06-04 19:04:14,815 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:05:13] 2025-06-04 19:04:14,903 | INFO     | [job] validate thread has finished
[2025-06-04 21:05:13] 2025-06-04 19:04:14,906 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:05:13] 2025-06-04 19:04:14,959 | INFO     | all job control threads have been joined
[2025-06-04 21:05:13] 2025-06-04 19:04:15,132 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:05:13] 2025-06-04 19:04:15,288 | INFO     | [data] control thread has finished
[2025-06-04 21:05:13] 2025-06-04 19:04:15,412 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:05:13] 2025-06-04 19:04:15,415 | INFO     | [payload] control thread has finished
[2025-06-04 21:05:13] 2025-06-04 19:04:15,501 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:05:13] 2025-06-04 19:04:15,632 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:05:13] 2025-06-04 19:04:15,645 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:05:13] 2025-06-04 19:04:15,964 | INFO     | [job] control thread has finished
[2025-06-04 21:05:13] 2025-06-04 19:04:16,637 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:05:13] 2025-06-04 19:04:18,559 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:05:13] 2025-06-04 19:04:23,495 | INFO     | job.realtimelogging is not enabled
[2025-06-04 21:05:13] 2025-06-04 19:04:24,500 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:05:13] 2025-06-04 19:04:26,446 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23264021428032)>', '<ExcThread(monitor, started 23263784699648)>']
[2025-06-04 21:05:13] 2025-06-04 19:04:26,953 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:05:13] 2025-06-04 19:04:26,953 | INFO     | [monitor] control thread has ended
[2025-06-04 21:05:13] 2025-06-04 19:04:31,472 | INFO     | all workflow threads have been joined
[2025-06-04 21:05:13] 2025-06-04 19:04:31,472 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:05:13] 2025-06-04 19:04:31,472 | INFO     | traces error code: 0
[2025-06-04 21:05:13] 2025-06-04 19:04:31,473 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:05:13] 2025-06-04 19:04:31,655 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:05:13] 2025-06-04 19:04:31,659 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:05:13] 2025-06-04 19:04:31,662 [wrapper] pilotpid: 4120219
[2025-06-04 21:05:13] 2025-06-04 19:04:31,667 [wrapper] Pilot exit status: 0
[2025-06-04 21:05:13] 2025-06-04 19:04:31,683 [wrapper] pandaids: 6677419657
[2025-06-04 21:05:13] 2025-06-04 19:04:31,840 [wrapper] cleanup supervisor_pilot  429025 4120220
[2025-06-04 21:05:13] 2025-06-04 19:04:31,844 [wrapper] Test setup, not cleaning
[2025-06-04 21:05:13] 2025-06-04 19:04:31,848 [wrapper] apfmon messages muted
[2025-06-04 21:05:13] 2025-06-04 19:04:31,852 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:05:13] 2025-06-04 19:04:31,856 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:05:13]  *** Error codes and diagnostics ***
[2025-06-04 21:05:13]     "exeErrorCode": 0,
[2025-06-04 21:05:13]     "exeErrorDiag": "",
[2025-06-04 21:05:13]     "pilotErrorCode": 0,
[2025-06-04 21:05:13]     "pilotErrorDiag": "",
[2025-06-04 21:05:13]  *** Listing of results directory ***
[2025-06-04 21:05:13] total 395412
[2025-06-04 21:05:13] -rw-r--r-- 1 boinc boinc    495897 Jun  3 01:21 pilot3.tar.gz
[2025-06-04 21:05:13] -rw-r--r-- 1 boinc boinc      5111 Jun  3 01:31 queuedata.json
[2025-06-04 21:05:13] -rwx------ 1 boinc boinc     37140 Jun  3 01:33 runpilot2-wrapper.sh
[2025-06-04 21:05:13] -rw-r--r-- 1 boinc boinc       100 Jun  4 18:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:05:13] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 18:41 run_atlas
[2025-06-04 21:05:13] -rw-r--r-- 1 boinc boinc       105 Jun  4 18:41 job.xml
[2025-06-04 21:05:13] -rw-r--r-- 1 boinc boinc      6686 Jun  4 18:41 init_data.xml
[2025-06-04 21:05:13] -rw-r--r-- 2 boinc boinc 214803718 Jun  4 18:41 EVNT.45006593._000573.pool.root.1
[2025-06-04 21:05:13] -rw-r--r-- 2 boinc boinc     15093 Jun  4 18:41 start_atlas.sh
[2025-06-04 21:05:13] drwxrwx--x 2 boinc boinc      4096 Jun  4 18:41 shared
[2025-06-04 21:05:13] -rw-r--r-- 2 boinc boinc    508880 Jun  4 18:41 input.tar.gz
[2025-06-04 21:05:13] -rw-r--r-- 1 boinc boinc         0 Jun  4 18:41 boinc_lockfile
[2025-06-04 21:05:13] -rw-r--r-- 1 boinc boinc      2524 Jun  4 18:41 pandaJob.out
[2025-06-04 21:05:13] -rw------- 1 boinc boinc    990984 Jun  4 18:41 agis_schedconf.cvmfs.json
[2025-06-04 21:05:13] -rw------- 1 boinc boinc   1598969 Jun  4 18:41 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:05:13] drwx------ 4 boinc boinc      4096 Jun  4 18:41 pilot3
[2025-06-04 21:05:13] -rw------- 1 boinc boinc 184054506 Jun  4 21:03 HITS.45006595._014327.pool.root.1
[2025-06-04 21:05:13] -rw------- 1 boinc boinc        95 Jun  4 21:03 pilot_heartbeat.json
[2025-06-04 21:05:13] -rw-r--r-- 1 boinc boinc       529 Jun  4 21:03 boinc_task_state.xml
[2025-06-04 21:05:13] -rw------- 1 boinc boinc      1030 Jun  4 21:03 memory_monitor_summary.json
[2025-06-04 21:05:13] -rw------- 1 boinc boinc    295943 Jun  4 21:04 log.45006595._014327.job.log.tgz.1
[2025-06-04 21:05:13] -rw------- 1 boinc boinc      7699 Jun  4 21:04 heartbeat.json
[2025-06-04 21:05:13] -rw------- 1 boinc boinc      4623 Jun  4 21:04 pilotlog.txt
[2025-06-04 21:05:13] -rw------- 1 boinc boinc    805343 Jun  4 21:04 log.45006595._014327.job.log.1
[2025-06-04 21:05:13] -rw------- 1 boinc boinc       357 Jun  4 21:04 output.list
[2025-06-04 21:05:13] -rw-r--r-- 1 boinc boinc       620 Jun  4 21:04 runtime_log
[2025-06-04 21:05:13] -rw------- 1 boinc boinc   1116160 Jun  4 21:04 result.tar.gz
[2025-06-04 21:05:13] -rw-r--r-- 1 boinc boinc      9040 Jun  4 21:04 runtime_log.err
[2025-06-04 21:05:13] -rw------- 1 boinc boinc       663 Jun  4 21:04 gVgLDmypTg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmp8gKDmzxRSkn.diag
[2025-06-04 21:05:13] -rw-r--r-- 1 boinc boinc        27 Jun  4 21:04 wrapper_checkpoint.txt
[2025-06-04 21:05:13] -rw-r--r-- 1 boinc boinc      8192 Jun  4 21:05 boinc_mmap_file
[2025-06-04 21:05:13] -rw-r--r-- 1 boinc boinc     21036 Jun  4 21:05 stderr.txt
[2025-06-04 21:05:13] HITS file was successfully produced:
[2025-06-04 21:05:13] -rw------- 1 boinc boinc 184054506 Jun  4 21:03 shared/HITS.pool.root.1
[2025-06-04 21:05:13]  *** Contents of shared directory: ***
[2025-06-04 21:05:13] total 391132
[2025-06-04 21:05:13] -rw-r--r-- 2 boinc boinc 214803718 Jun  4 18:41 ATLAS.root_0
[2025-06-04 21:05:13] -rw-r--r-- 2 boinc boinc     15093 Jun  4 18:41 start_atlas.sh
[2025-06-04 21:05:13] -rw-r--r-- 2 boinc boinc    508880 Jun  4 18:41 input.tar.gz
[2025-06-04 21:05:13] -rw------- 1 boinc boinc 184054506 Jun  4 21:03 HITS.pool.root.1
[2025-06-04 21:05:13] -rw------- 1 boinc boinc   1116160 Jun  4 21:04 result.tar.gz
21:05:14 (4116319): run_atlas exited; CPU time 32929.726976
21:05:14 (4116319): called boinc_finish(0)

</stderr_txt>
]]>

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