Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:43:18 (551375): wrapper (7.7.26015): starting
20:43:18 (551375): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 20:43:18] Arguments: --nthreads 8
[2025-06-02 20:43:18] Threads: 8
[2025-06-02 20:43:18] Checking for CVMFS
[2025-06-02 20:43:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 20:43:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 20:43:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 20:43:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 20:43:19] 2.11.3.0 449023 201892 151276 146729 3 268 36517538 45568001 9981 130560 0 1126328491 99.732 1062090497 20774 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-06-02 20:43:19] CVMFS is ok
[2025-06-02 20:43:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 20:43:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 20:43:19] Further information can be found at the LHC@home message board.
[2025-06-02 20:43:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 20:43:19] Checking for apptainer binary...
[2025-06-02 20:43:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 20:43:19] Running /usr/bin/apptainer --version
[2025-06-02 20:43:19] apptainer version 1.3.3-1.el9
[2025-06-02 20:43:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 20:43:19] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0009.triumf.lcg
[2025-06-02 20:43:19] apptainer works
[2025-06-02 20:43:19] Set ATHENA_PROC_NUMBER=8
[2025-06-02 20:43:19] Set ATHENA_CORE_NUMBER=8
[2025-06-02 20:43:19] Starting ATLAS job with PandaID=6677443143
[2025-06-02 20:43:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 20:47:12]  *** The last 200 lines of the pilot log: ***
[2025-06-02 20:47:12] 2025-06-03 03:46:56,293 | INFO     | extracted standard info from prmon json
[2025-06-02 20:47:12] 2025-06-03 03:46:56,293 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 20:47:12] 2025-06-03 03:46:56,293 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 20:47:12] 2025-06-03 03:46:56,294 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 20:47:12] 2025-06-03 03:46:56,294 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | WARNING  | wrong length of table data, x=[1748922265.0], y=[1072.0] (must be same and length>=4)
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | ..............................
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . Timing measurements:
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . get job = 0 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . initial setup = 4 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . payload setup = 17 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . stage-in = 0 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . payload execution = 36 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . stage-out = 0 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . log creation = 0 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | ..............................
[2025-06-02 20:47:12] 2025-06-03 03:46:56,296 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 20:47:12] 2025-06-03 03:46:56,296 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677443143/pilotlog.txt
[2025-06-02 20:47:12] 2025-06-03 03:46:56,317 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-02 20:47:12] - Log from pilotlog.txt -
[2025-06-02 20:47:12] 2025-06-03 03:46:56,292 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-02 20:47:12] 2025-06-03 03:46:56,292 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677443143/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 20:47:12] 2025-06-03 03:46:56,293 | INFO     | extracted standard info from prmon json
[2025-06-02 20:47:12] 2025-06-03 03:46:56,293 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 20:47:12] 2025-06-03 03:46:56,293 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 20:47:12] 2025-06-03 03:46:56,294 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 20:47:12] 2025-06-03 03:46:56,294 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | WARNING  | wrong length of table data, x=[1748922265.0], y=[1072.0] (must be same and length>=4)
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | ..............................
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . Timing measurements:
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . get job = 0 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . initial setup = 4 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . payload setup = 17 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . stage-in = 0 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . payload execution = 36 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . stage-out = 0 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . log creation = 0 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | ..............................
[2025-06-02 20:47:12] 2025-06-03 03:46:56,296 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 20:47:12] 2025-06-03 03:46:56,296 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677443143/pilotlog.txt
[2025-06-02 20:47:12] 2025-06-03 03:46:56,317 | WARNING  | 
[2025-06-02 20:47:12] [begin log extracts]
[2025-06-02 20:47:12] - Log from pilotlog.txt -
[2025-06-02 20:47:12] 2025-06-03 03:46:56,292 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-02 20:47:12] 2025-06-03 03:46:56,292 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677443143/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 20:47:12] 2025-06-03 03:46:56,293 | INFO     | extracted standard info from prmon json
[2025-06-02 20:47:12] 2025-06-03 03:46:56,293 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 20:47:12] 2025-06-03 03:46:56,293 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 20:47:12] 2025-06-03 03:46:56,294 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 20:47:12] 2025-06-03 03:46:56,294 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | WARNING  | wrong length of table data, x=[1748922265.0], y=[1072.0] (must be same and length>=4)
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | ..............................
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . Timing measurements:
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . get job = 0 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . initial setup = 4 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . payload setup = 17 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . stage-in = 0 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . payload execution = 36 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . stage-out = 0 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | . log creation = 0 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,295 | INFO     | ..............................
[2025-06-02 20:47:12] 2025-06-03 03:46:56,296 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 20:47:12] 2025-06-03 03:46:56,296 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677443143/pilotlog.txt
[2025-06-02 20:47:12] [end log extracts]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,318 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-02 20:47:12] 2025-06-03 03:46:56,319 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-02 20:47:12] 2025-06-03 03:46:56,521 | INFO     | 
[2025-06-02 20:47:12] 2025-06-03 03:46:56,521 | INFO     | job summary report
[2025-06-02 20:47:12] 2025-06-03 03:46:56,522 | INFO     | --------------------------------------------------
[2025-06-02 20:47:12] 2025-06-03 03:46:56,522 | INFO     | PanDA job id: 6677443143
[2025-06-02 20:47:12] 2025-06-03 03:46:56,522 | INFO     | task id: 45006595
[2025-06-02 20:47:12] 2025-06-03 03:46:56,522 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-02 20:44:43,926 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-02 20:47:12] 2025-06-03 03:46:56,522 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 20:47:12] 2025-06-03 03:46:56,522 | INFO     | pilot state: failed 
[2025-06-02 20:47:12] 2025-06-03 03:46:56,522 | INFO     | transexitcode: 65
[2025-06-02 20:47:12] 2025-06-03 03:46:56,522 | INFO     | exeerrorcode: 65
[2025-06-02 20:47:12] 2025-06-03 03:46:56,522 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 20:47:12] 2025-06-03 03:46:56,522 | INFO     | exitcode: 65
[2025-06-02 20:47:12] 2025-06-03 03:46:56,522 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 20:47:12] 2025-06-03 03:46:56,522 | INFO     | cpuconsumptiontime: 17 s
[2025-06-02 20:47:12] 2025-06-03 03:46:56,522 | INFO     | nevents: 0
[2025-06-02 20:47:12] 2025-06-03 03:46:56,522 | INFO     | neventsw: 0
[2025-06-02 20:47:12] 2025-06-03 03:46:56,523 | INFO     | pid: 575051
[2025-06-02 20:47:12] 2025-06-03 03:46:56,523 | INFO     | pgrp: 575051
[2025-06-02 20:47:12] 2025-06-03 03:46:56,523 | INFO     | corecount: 8
[2025-06-02 20:47:12] 2025-06-03 03:46:56,523 | INFO     | event service: False
[2025-06-02 20:47:12] 2025-06-03 03:46:56,523 | INFO     | sizes: {0: 2404353, 1: 2405206, 11: 2405412, 12: 2405440, 57: 2428723, 59: 2433114, 181: 2433228}
[2025-06-02 20:47:12] 2025-06-03 03:46:56,523 | INFO     | --------------------------------------------------
[2025-06-02 20:47:12] 2025-06-03 03:46:56,523 | INFO     | 
[2025-06-02 20:47:12] 2025-06-03 03:46:56,523 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-02 20:47:12] 2025-06-03 03:46:56,565 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,565 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,565 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,565 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,566 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,566 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,566 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,566 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,566 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,566 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,566 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,566 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,566 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,566 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,566 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,566 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,566 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,566 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 20:47:12] 2025-06-03 03:46:56,567 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,567 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 20:47:12] 2025-06-03 03:46:56,567 | INFO     | job 6677443143 has completed (purged errors)
[2025-06-02 20:47:12] 2025-06-03 03:46:56,567 | INFO     | overall cleanup function is called
[2025-06-02 20:47:12] 2025-06-03 03:46:57,575 | INFO     | --- collectZombieJob: --- 10, [575051]
[2025-06-02 20:47:12] 2025-06-03 03:46:57,575 | INFO     | zombie collector waiting for pid 575051
[2025-06-02 20:47:12] 2025-06-03 03:46:57,576 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 20:47:12] 2025-06-03 03:46:57,576 | INFO     | collected zombie processes
[2025-06-02 20:47:12] 2025-06-03 03:46:57,576 | INFO     | will attempt to kill all subprocesses of pid=575051
[2025-06-02 20:47:12] 2025-06-03 03:46:57,786 | INFO     | process IDs to be killed: [575051] (in reverse order)
[2025-06-02 20:47:12] 2025-06-03 03:46:57,852 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 20:47:12] 2025-06-03 03:46:57,853 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 20:47:12] 2025-06-03 03:46:57,879 | INFO     | did not find any defunct processes belonging to 575051
[2025-06-02 20:47:12] 2025-06-03 03:46:57,929 | INFO     | did not find any defunct processes belonging to 575051
[2025-06-02 20:47:12] 2025-06-03 03:46:57,929 | INFO     | ready for new job
[2025-06-02 20:47:12] 2025-06-03 03:46:57,943 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 20:47:12] 2025-06-03 03:46:57,945 | INFO     | **************************************
[2025-06-02 20:47:12] 2025-06-03 03:46:57,945 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 20:47:12] 2025-06-03 03:46:57,945 | INFO     | **************************************
[2025-06-02 20:47:12] 2025-06-03 03:46:57,945 | INFO     | 
[2025-06-02 20:47:12] 2025-06-03 03:46:57,957 | INFO     | architecture information:
[2025-06-02 20:47:12] 2025-06-03 03:46:57,966 | INFO     | executing command: cat /etc/os-release
[2025-06-02 20:47:12] 2025-06-03 03:46:58,098 | INFO     | cat /etc/os-release:
[2025-06-02 20:47:12] NAME="CentOS Linux"
[2025-06-02 20:47:12] VERSION="7 (Core)"
[2025-06-02 20:47:12] ID="centos"
[2025-06-02 20:47:12] ID_LIKE="rhel fedora"
[2025-06-02 20:47:12] VERSION_ID="7"
[2025-06-02 20:47:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 20:47:12] ANSI_COLOR="0;31"
[2025-06-02 20:47:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 20:47:12] HOME_URL="https://www.centos.org/"
[2025-06-02 20:47:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 20:47:12] 
[2025-06-02 20:47:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 20:47:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 20:47:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 20:47:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 20:47:12] 
[2025-06-02 20:47:12] 2025-06-03 03:46:58,099 | INFO     | **************************************
[2025-06-02 20:47:12] 2025-06-03 03:46:58,611 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-02 20:47:12] 2025-06-03 03:46:58,628 | INFO     | sufficient remaining disk space (1325532184576 B)
[2025-06-02 20:47:12] 2025-06-03 03:46:58,629 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 20:47:12] 2025-06-03 03:46:58,629 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 20:47:12] 2025-06-03 03:46:58,629 | INFO     | update_server=False
[2025-06-02 20:47:12] 2025-06-03 03:46:58,629 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 20:47:12] 2025-06-03 03:46:58,673 | INFO     | PID=558972 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-02 20:47:12] 2025-06-03 03:46:58,673 | INFO     | .. there are 19 such processes running
[2025-06-02 20:47:12] 2025-06-03 03:46:58,673 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 20:47:12] 2025-06-03 03:46:58,674 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 20:47:12] 2025-06-03 03:46:58,674 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 20:47:12] 2025-06-03 03:46:58,759 | INFO     | all job control threads have been joined
[2025-06-02 20:47:12] 2025-06-03 03:46:58,834 | INFO     | all data control threads have been joined
[2025-06-02 20:47:12] 2025-06-03 03:46:59,068 | INFO     | all payload control threads have been joined
[2025-06-02 20:47:12] 2025-06-03 03:46:59,397 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 20:47:12] 2025-06-03 03:46:59,397 | INFO     | aborting loop
[2025-06-02 20:47:12] 2025-06-03 03:46:59,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 20:47:12] 2025-06-03 03:46:59,636 | INFO     | [job] retrieve thread has finished
[2025-06-02 20:47:12] 2025-06-03 03:46:59,681 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 20:47:12] 2025-06-03 03:46:59,734 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 20:47:12] 2025-06-03 03:46:59,763 | INFO     | [job] control thread has finished
[2025-06-02 20:47:12] 2025-06-03 03:46:59,839 | INFO     | [data] control thread has finished
[2025-06-02 20:47:12] 2025-06-03 03:47:00,073 | INFO     | [payload] control thread has finished
[2025-06-02 20:47:12] 2025-06-03 03:47:00,200 | INFO     | [payload] failed_post thread has finished
[2025-06-02 20:47:12] 2025-06-03 03:47:00,404 | INFO     | [job] job monitor thread has finished
[2025-06-02 20:47:12] 2025-06-03 03:47:00,596 | INFO     | [job] validate thread has finished
[2025-06-02 20:47:12] 2025-06-03 03:47:00,629 | INFO     | [data] copytool_in thread has finished
[2025-06-02 20:47:12] 2025-06-03 03:47:00,809 | INFO     | [payload] validate_post thread has finished
[2025-06-02 20:47:12] 2025-06-03 03:47:00,959 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 20:47:12] 2025-06-03 03:47:00,986 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 20:47:12] 2025-06-03 03:47:01,426 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 20:47:12] 2025-06-03 03:47:01,648 | INFO     | [data] copytool_out thread has finished
[2025-06-02 20:47:12] 2025-06-03 03:47:01,702 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 20:47:12] 2025-06-03 03:47:02,432 | INFO     | [job] queue monitor thread has finished
[2025-06-02 20:47:12] 2025-06-03 03:47:05,716 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 20:47:12] 2025-06-03 03:47:07,544 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140459302385472)>', '<ExcThread(monitor, started 140458776848128)>']
[2025-06-02 20:47:12] 2025-06-03 03:47:07,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 20:47:12] 2025-06-03 03:47:07,741 | INFO     | [monitor] control thread has ended
[2025-06-02 20:47:12] 2025-06-03 03:47:12,569 | INFO     | all workflow threads have been joined
[2025-06-02 20:47:12] 2025-06-03 03:47:12,573 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 20:47:12] 2025-06-03 03:47:12,576 | INFO     | traces error code: 0
[2025-06-02 20:47:12] 2025-06-03 03:47:12,576 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 20:47:12] 2025-06-03 03:47:12,776 [wrapper] ==== pilot stdout END ====
[2025-06-02 20:47:12] 2025-06-03 03:47:12,803 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 20:47:12] 2025-06-03 03:47:12,806 [wrapper] pilotpid: 558972
[2025-06-02 20:47:12] 2025-06-03 03:47:12,829 [wrapper] Pilot exit status: 0
[2025-06-02 20:47:12] 2025-06-03 03:47:12,878 [wrapper] pandaids: 6677443143
[2025-06-02 20:47:12] 2025-06-03 03:47:12,915 [wrapper] cleanup supervisor_pilot  558978 558973
[2025-06-02 20:47:12] 2025-06-03 03:47:12,918 [wrapper] Test setup, not cleaning
[2025-06-02 20:47:12] 2025-06-03 03:47:12,920 [wrapper] apfmon messages muted
[2025-06-02 20:47:12] 2025-06-03 03:47:12,922 [wrapper] ==== wrapper stdout END ====
[2025-06-02 20:47:12] 2025-06-03 03:47:12,924 [wrapper] ==== wrapper stderr END ====
[2025-06-02 20:47:12]  *** Error codes and diagnostics ***
[2025-06-02 20:47:12]     "exeErrorCode": 65,
[2025-06-02 20:47:12]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 20:47:12]     "pilotErrorCode": 1305,
[2025-06-02 20:47:12]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 20:47:12]  *** Listing of results directory ***
[2025-06-02 20:47:12] total 213088
[2025-06-02 20:47:12] -rw-r--r--. 1 boinc boinc    495897 Jun  2 18:51 pilot3.tar.gz
[2025-06-02 20:47:12] -rwx------. 1 boinc boinc     37140 Jun  2 18:52 runpilot2-wrapper.sh
[2025-06-02 20:47:12] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:52 queuedata.json
[2025-06-02 20:47:12] -rw-r--r--. 1 boinc boinc       100 Jun  2 20:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 20:47:12] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 20:43 run_atlas
[2025-06-02 20:47:12] -rw-r--r--. 1 boinc boinc       105 Jun  2 20:43 job.xml
[2025-06-02 20:47:12] -rw-r--r--. 2 boinc boinc 214169311 Jun  2 20:43 EVNT.45006593._000669.pool.root.1
[2025-06-02 20:47:12] -rw-r--r--. 1 boinc boinc      6451 Jun  2 20:43 init_data.xml
[2025-06-02 20:47:12] -rw-r--r--. 2 boinc boinc     15093 Jun  2 20:43 start_atlas.sh
[2025-06-02 20:47:12] drwxrwx--x. 2 boinc boinc      4096 Jun  2 20:43 shared
[2025-06-02 20:47:12] -rw-r--r--. 2 boinc boinc    508869 Jun  2 20:43 input.tar.gz
[2025-06-02 20:47:12] -rw-r--r--. 1 boinc boinc         0 Jun  2 20:43 boinc_lockfile
[2025-06-02 20:47:12] -rw-r--r--. 1 boinc boinc      2523 Jun  2 20:43 pandaJob.out
[2025-06-02 20:47:12] -rw-------. 1 boinc boinc    988073 Jun  2 20:43 agis_schedconf.cvmfs.json
[2025-06-02 20:47:12] -rw-------. 1 boinc boinc   1603667 Jun  2 20:43 agis_ddmendpoints.agis.ALL.json
[2025-06-02 20:47:12] drwx------. 4 boinc boinc      4096 Jun  2 20:43 pilot3
[2025-06-02 20:47:12] -rw-r--r--. 1 boinc boinc       522 Jun  2 20:44 boinc_task_state.xml
[2025-06-02 20:47:12] -rw-------. 1 boinc boinc       961 Jun  2 20:44 memory_monitor_summary.json
[2025-06-02 20:47:12] -rw-------. 1 boinc boinc     20973 Jun  2 20:44 log.45006595._016719.job.log.tgz.1
[2025-06-02 20:47:12] -rw-------. 1 boinc boinc        95 Jun  2 20:46 pilot_heartbeat.json
[2025-06-02 20:47:12] -rw-------. 1 boinc boinc      8349 Jun  2 20:46 heartbeat.json
[2025-06-02 20:47:12] -rw-r--r--. 1 boinc boinc      8192 Jun  2 20:47 boinc_mmap_file
[2025-06-02 20:47:12] -rw-r--r--. 1 boinc boinc        22 Jun  2 20:47 wrapper_checkpoint.txt
[2025-06-02 20:47:12] -rw-------. 1 boinc boinc      4746 Jun  2 20:47 pilotlog.txt
[2025-06-02 20:47:12] -rw-------. 1 boinc boinc     76272 Jun  2 20:47 log.45006595._016719.job.log.1
[2025-06-02 20:47:12] -rw-------. 1 boinc boinc       188 Jun  2 20:47 output.list
[2025-06-02 20:47:12] -rw-r--r--. 1 boinc boinc       620 Jun  2 20:47 runtime_log
[2025-06-02 20:47:12] -rw-------. 1 boinc boinc    112640 Jun  2 20:47 result.tar.gz
[2025-06-02 20:47:12] -rw-r--r--. 1 boinc boinc      8647 Jun  2 20:47 runtime_log.err
[2025-06-02 20:47:12] -rw-------. 1 boinc boinc       647 Jun  2 20:47 FNIMDmd0Vg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWShKDm82uvsn.diag
[2025-06-02 20:47:12] -rw-r--r--. 1 boinc boinc     21843 Jun  2 20:47 stderr.txt
[2025-06-02 20:47:12] No HITS result produced
[2025-06-02 20:47:12]  *** Contents of shared directory: ***
[2025-06-02 20:47:13] total 209784
[2025-06-02 20:47:13] -rw-r--r--. 2 boinc boinc 214169311 Jun  2 20:43 ATLAS.root_0
[2025-06-02 20:47:13] -rw-r--r--. 2 boinc boinc     15093 Jun  2 20:43 start_atlas.sh
[2025-06-02 20:47:13] -rw-r--r--. 2 boinc boinc    508869 Jun  2 20:43 input.tar.gz
[2025-06-02 20:47:13] -rw-------. 1 boinc boinc    112640 Jun  2 20:47 result.tar.gz
20:47:14 (551375): run_atlas exited; CPU time 24.439802
20:47:14 (551375): called boinc_finish(0)

</stderr_txt>
]]>

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