Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:26:17 (1724410): wrapper (7.7.26015): starting
15:26:17 (1724410): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 15:26:17] Arguments: --nthreads 4
[2025-06-04 15:26:17] Threads: 4
[2025-06-04 15:26:17] Checking for CVMFS
[2025-06-04 15:26:17] No cvmfs_config command found, will try listing directly
[2025-06-04 15:26:17] CVMFS is ok
[2025-06-04 15:26:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 15:26:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 15:26:17] Further information can be found at the LHC@home message board.
[2025-06-04 15:26:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:26:17] Checking for apptainer binary...
[2025-06-04 15:26:17] which: no apptainer in ((null))
[2025-06-04 15:26:17] apptainer is not installed, using version from CVMFS
[2025-06-04 15:26:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:26:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-06-04 15:26:18] apptainer works
[2025-06-04 15:26:18] Set ATHENA_PROC_NUMBER=4
[2025-06-04 15:26:18] Set ATHENA_CORE_NUMBER=4
[2025-06-04 15:26:18] Starting ATLAS job with PandaID=6677419894
[2025-06-04 15:26:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:27:26]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:27:26] 2025-06-04 15:26:35,517 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 17:27:26] 2025-06-04 15:26:35,518 | INFO     | using path: /scratch/boinc/var/slot100/slots/0/PanDA_Pilot-6677419894/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:27:26] 2025-06-04 15:26:35,519 | INFO     | extracted standard info from prmon json
[2025-06-04 17:27:26] 2025-06-04 15:26:35,519 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:27:26] 2025-06-04 15:26:35,519 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:27:26] 2025-06-04 15:26:35,520 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:27:26] 2025-06-04 15:26:35,520 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:27:26] 2025-06-04 15:26:35,522 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:27:26] 2025-06-04 15:26:35,522 | INFO     | sum of square deviations: 509440249.5
[2025-06-04 17:27:26] 2025-06-04 15:26:35,523 | INFO     | sum of deviations: 4554981507.999996
[2025-06-04 17:27:26] 2025-06-04 15:26:35,523 | INFO     | mean x: 1749047191.5
[2025-06-04 17:27:26] 2025-06-04 15:26:35,523 | INFO     | mean y: 2296945.694915254
[2025-06-04 17:27:26] 2025-06-04 15:26:35,523 | INFO     | -- intersect: -15636195736.65807
[2025-06-04 17:27:26] 2025-06-04 15:26:35,523 | INFO     | intersect: -15636195736.65807
[2025-06-04 17:27:26] 2025-06-04 15:26:35,523 | INFO     | chi2: 2.2427382988700755
[2025-06-04 17:27:26] 2025-06-04 15:26:35,523 | INFO     | sum of square deviations: 447383272.0
[2025-06-04 17:27:26] 2025-06-04 15:26:35,524 | INFO     | sum of deviations: 11549140065.000002
[2025-06-04 17:27:26] 2025-06-04 15:26:35,524 | INFO     | mean x: 1749047039.0
[2025-06-04 17:27:26] 2025-06-04 15:26:35,524 | INFO     | mean y: 2313525.5044247787
[2025-06-04 17:27:26] 2025-06-04 15:26:35,524 | INFO     | -- intersect: -45149104727.98029
[2025-06-04 17:27:26] 2025-06-04 15:26:35,524 | INFO     | intersect: -45149104727.98029
[2025-06-04 17:27:26] 2025-06-04 15:26:35,524 | INFO     | chi2: 1.4783337354694777
[2025-06-04 17:27:26] 2025-06-04 15:26:35,524 | INFO     | current chi2=1.4783337354694777 (change=34.08353813664822 %)
[2025-06-04 17:27:26] 2025-06-04 15:26:35,525 | INFO     | sum of square deviations: 390582207.0
[2025-06-04 17:27:26] 2025-06-04 15:26:35,525 | INFO     | sum of deviations: 11169040586.000002
[2025-06-04 17:27:26] 2025-06-04 15:26:35,525 | INFO     | mean x: 1749046886.5
[2025-06-04 17:27:26] 2025-06-04 15:26:35,525 | INFO     | mean y: 2312504.314814815
[2025-06-04 17:27:26] 2025-06-04 15:26:35,525 | INFO     | -- intersect: -50013216395.944176
[2025-06-04 17:27:26] 2025-06-04 15:26:35,525 | INFO     | intersect: -50013216395.944176
[2025-06-04 17:27:26] 2025-06-04 15:26:35,526 | INFO     | chi2: 1.4809643650721478
[2025-06-04 17:27:26] 2025-06-04 15:26:35,526 | INFO     | current chi2=1.4809643650721478 (change=-0.1779455842448672 %)
[2025-06-04 17:27:26] 2025-06-04 15:26:35,526 | INFO     | right removable region: 107
[2025-06-04 17:27:26] 2025-06-04 15:26:35,526 | INFO     | sum of square deviations: 447383272.0
[2025-06-04 17:27:26] 2025-06-04 15:26:35,526 | INFO     | sum of deviations: -11125801895.0
[2025-06-04 17:27:26] 2025-06-04 15:26:35,526 | INFO     | mean x: 1749047344.0
[2025-06-04 17:27:26] 2025-06-04 15:26:35,527 | INFO     | mean y: 2334632.3274336285
[2025-06-04 17:27:26] 2025-06-04 15:26:35,527 | INFO     | -- intersect: 43498717872.87005
[2025-06-04 17:27:26] 2025-06-04 15:26:35,527 | INFO     | intersect: 43498717872.87005
[2025-06-04 17:27:26] 2025-06-04 15:26:35,527 | INFO     | chi2: 0.8018940996714472
[2025-06-04 17:27:26] 2025-06-04 15:26:35,527 | INFO     | current chi2=0.8018940996714472 (change=64.24486530258777 %)
[2025-06-04 17:27:26] 2025-06-04 15:26:35,527 | INFO     | sum of square deviations: 390582207.0
[2025-06-04 17:27:26] 2025-06-04 15:26:35,528 | INFO     | sum of deviations: -9979882460.5
[2025-06-04 17:27:26] 2025-06-04 15:26:35,528 | INFO     | mean x: 1749047496.5
[2025-06-04 17:27:26] 2025-06-04 15:26:35,528 | INFO     | mean y: 2331566.546296296
[2025-06-04 17:27:26] 2025-06-04 15:26:35,528 | INFO     | -- intersect: 44692765795.419876
[2025-06-04 17:27:26] 2025-06-04 15:26:35,528 | INFO     | intersect: 44692765795.419876
[2025-06-04 17:27:26] 2025-06-04 15:26:35,528 | INFO     | chi2: 0.8023769542144501
[2025-06-04 17:27:26] 2025-06-04 15:26:35,528 | INFO     | current chi2=0.8023769542144501 (change=-0.06021425312902702 %)
[2025-06-04 17:27:26] 2025-06-04 15:26:35,528 | INFO     | left removable region: 20
[2025-06-04 17:27:26] 2025-06-04 15:26:35,529 | INFO     | sum of square deviations: 204163828.0
[2025-06-04 17:27:26] 2025-06-04 15:26:35,529 | INFO     | sum of deviations: -2149959457.0
[2025-06-04 17:27:26] 2025-06-04 15:26:35,529 | INFO     | mean x: 1749047466.0
[2025-06-04 17:27:26] 2025-06-04 15:26:35,529 | INFO     | mean y: 2350316.2988505745
[2025-06-04 17:27:26] 2025-06-04 15:26:35,529 | INFO     | -- intersect: 18420799740.49649
[2025-06-04 17:27:26] 2025-06-04 15:26:35,529 | INFO     | intersect: 18420799740.49649
[2025-06-04 17:27:26] 2025-06-04 15:26:35,529 | INFO     | chi2: 0.0014372230328713851
[2025-06-04 17:27:26] 2025-06-04 15:26:35,529 | INFO     | -- intersect: 18420799740.49649
[2025-06-04 17:27:26] 2025-06-04 15:26:35,530 | INFO     | current memory leak: -10.53 B/s (using 87 data points, chi2=0.00)
[2025-06-04 17:27:26] 2025-06-04 15:26:35,530 | INFO     | ..............................
[2025-06-04 17:27:26] 2025-06-04 15:26:35,530 | INFO     | . Timing measurements:
[2025-06-04 17:27:26] 2025-06-04 15:26:35,530 | INFO     | . get job = 0 s
[2025-06-04 17:27:26] 2025-06-04 15:26:35,530 | INFO     | . initial setup = 1 s
[2025-06-04 17:27:26] 2025-06-04 15:26:35,530 | INFO     | . payload setup = 9 s
[2025-06-04 17:27:26] 2025-06-04 15:26:35,530 | INFO     | . stage-in = 0 s
[2025-06-04 17:27:26] 2025-06-04 15:26:35,530 | INFO     | . payload execution = 7162 s
[2025-06-04 17:27:26] 2025-06-04 15:26:35,531 | INFO     | . stage-out = 0 s
[2025-06-04 17:27:26] 2025-06-04 15:26:35,531 | INFO     | . log creation = 0 s
[2025-06-04 17:27:26] 2025-06-04 15:26:35,531 | INFO     | ..............................
[2025-06-04 17:27:26] 2025-06-04 15:26:36,054 | INFO     | 
[2025-06-04 17:27:26] 2025-06-04 15:26:36,055 | INFO     | job summary report
[2025-06-04 17:27:26] 2025-06-04 15:26:36,055 | INFO     | --------------------------------------------------
[2025-06-04 17:27:26] 2025-06-04 15:26:36,055 | INFO     | PanDA job id: 6677419894
[2025-06-04 17:27:26] 2025-06-04 15:26:36,055 | INFO     | task id: 45006595
[2025-06-04 17:27:26] 2025-06-04 15:26:36,055 | INFO     | errors: (none)
[2025-06-04 17:27:26] 2025-06-04 15:26:36,055 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:27:26] 2025-06-04 15:26:36,055 | INFO     | pilot state: finished 
[2025-06-04 17:27:26] 2025-06-04 15:26:36,055 | INFO     | transexitcode: 0
[2025-06-04 17:27:26] 2025-06-04 15:26:36,055 | INFO     | exeerrorcode: 0
[2025-06-04 17:27:26] 2025-06-04 15:26:36,055 | INFO     | exeerrordiag: 
[2025-06-04 17:27:26] 2025-06-04 15:26:36,055 | INFO     | exitcode: 0
[2025-06-04 17:27:26] 2025-06-04 15:26:36,055 | INFO     | exitmsg: OK
[2025-06-04 17:27:26] 2025-06-04 15:26:36,055 | INFO     | cpuconsumptiontime: 27552 s
[2025-06-04 17:27:26] 2025-06-04 15:26:36,056 | INFO     | nevents: 400
[2025-06-04 17:27:26] 2025-06-04 15:26:36,056 | INFO     | neventsw: 0
[2025-06-04 17:27:26] 2025-06-04 15:26:36,056 | INFO     | pid: 1736968
[2025-06-04 17:27:26] 2025-06-04 15:26:36,056 | INFO     | pgrp: 1736968
[2025-06-04 17:27:26] 2025-06-04 15:26:36,056 | INFO     | corecount: 4
[2025-06-04 17:27:26] 2025-06-04 15:26:36,056 | INFO     | event service: False
[2025-06-04 17:27:26] 2025-06-04 15:26:36,056 | INFO     | sizes: {0: 2397125, 1: 2397380, 7: 2397586, 12: 2397614, 7175: 2425020, 7177: 2433985, 7179: 2434169, 7188: 2434339}
[2025-06-04 17:27:26] 2025-06-04 15:26:36,056 | INFO     | --------------------------------------------------
[2025-06-04 17:27:26] 2025-06-04 15:26:36,056 | INFO     | 
[2025-06-04 17:27:26] 2025-06-04 15:26:36,056 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-06-04 17:27:26] 2025-06-04 15:26:36,087 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:27:26] 2025-06-04 15:26:36,087 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:27:26] 2025-06-04 15:26:36,087 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:27:26] 2025-06-04 15:26:36,088 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:27:26] 2025-06-04 15:26:36,088 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:27:26] 2025-06-04 15:26:36,088 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:27:26] 2025-06-04 15:26:36,088 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:27:26] 2025-06-04 15:26:36,088 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:27:26] 2025-06-04 15:26:36,088 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:27:26] 2025-06-04 15:26:36,088 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:27:26] 2025-06-04 15:26:36,088 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:27:26] 2025-06-04 15:26:36,088 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:27:26] 2025-06-04 15:26:36,088 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:27:26] 2025-06-04 15:26:36,088 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:27:26] 2025-06-04 15:26:36,088 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:27:26] 2025-06-04 15:26:36,089 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:27:26] 2025-06-04 15:26:36,089 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:27:26] 2025-06-04 15:26:36,089 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:27:26] 2025-06-04 15:26:36,089 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:27:26] 2025-06-04 15:26:36,089 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:27:26] 2025-06-04 15:26:36,089 | INFO     | job 6677419894 has completed (purged errors)
[2025-06-04 17:27:26] 2025-06-04 15:26:36,089 | INFO     | overall cleanup function is called
[2025-06-04 17:27:26] 2025-06-04 15:26:37,097 | INFO     | --- collectZombieJob: --- 10, [1736968]
[2025-06-04 17:27:26] 2025-06-04 15:26:37,098 | INFO     | zombie collector waiting for pid 1736968
[2025-06-04 17:27:26] 2025-06-04 15:26:37,098 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:27:26] 2025-06-04 15:26:37,098 | INFO     | collected zombie processes
[2025-06-04 17:27:26] 2025-06-04 15:26:37,098 | INFO     | will attempt to kill all subprocesses of pid=1736968
[2025-06-04 17:27:26] 2025-06-04 15:26:37,775 | INFO     | process IDs to be killed: [1736968] (in reverse order)
[2025-06-04 17:27:26] 2025-06-04 15:26:38,027 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:27:26] 2025-06-04 15:26:38,027 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:27:26] 2025-06-04 15:26:38,049 | INFO     | did not find any defunct processes belonging to 1736968
[2025-06-04 17:27:26] 2025-06-04 15:26:38,069 | INFO     | did not find any defunct processes belonging to 1736968
[2025-06-04 17:27:26] 2025-06-04 15:26:38,069 | INFO     | ready for new job
[2025-06-04 17:27:26] 2025-06-04 15:26:38,070 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:27:26] 2025-06-04 15:26:38,071 | INFO     | **************************************
[2025-06-04 17:27:26] 2025-06-04 15:26:38,072 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:27:26] 2025-06-04 15:26:38,072 | INFO     | **************************************
[2025-06-04 17:27:26] 2025-06-04 15:26:38,072 | INFO     | 
[2025-06-04 17:27:26] 2025-06-04 15:26:38,079 | INFO     | architecture information:
[2025-06-04 17:27:26] 2025-06-04 15:26:38,079 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:27:26] 2025-06-04 15:26:38,103 | INFO     | cat /etc/os-release:
[2025-06-04 17:27:26] NAME="CentOS Linux"
[2025-06-04 17:27:26] VERSION="7 (Core)"
[2025-06-04 17:27:26] ID="centos"
[2025-06-04 17:27:26] ID_LIKE="rhel fedora"
[2025-06-04 17:27:26] VERSION_ID="7"
[2025-06-04 17:27:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:27:26] ANSI_COLOR="0;31"
[2025-06-04 17:27:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:27:26] HOME_URL="https://www.centos.org/"
[2025-06-04 17:27:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:27:26] 
[2025-06-04 17:27:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:27:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:27:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:27:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:27:26] 
[2025-06-04 17:27:26] 2025-06-04 15:26:38,104 | INFO     | **************************************
[2025-06-04 17:27:26] 2025-06-04 15:26:38,607 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-06-04 17:27:26] 2025-06-04 15:26:38,628 | INFO     | sufficient remaining disk space (3216090595328 B)
[2025-06-04 17:27:26] 2025-06-04 15:26:38,628 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:27:26] 2025-06-04 15:26:38,628 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:27:26] 2025-06-04 15:26:38,628 | INFO     | update_server=False
[2025-06-04 17:27:26] 2025-06-04 15:26:38,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:27:26] 2025-06-04 15:26:38,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:27:26] 2025-06-04 15:26:38,629 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:27:26] 2025-06-04 15:26:38,630 | INFO     | aborting loop
[2025-06-04 17:27:26] 2025-06-04 15:26:38,723 | INFO     | all data control threads have been joined
[2025-06-04 17:27:26] 2025-06-04 15:26:38,947 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:27:26] 2025-06-04 15:26:38,948 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:27:26] 2025-06-04 15:26:38,948 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:27:26] 2025-06-04 15:26:39,633 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:27:26] 2025-06-04 15:26:39,634 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:27:26] 2025-06-04 15:26:39,723 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:27:26] 2025-06-04 15:26:39,729 | INFO     | [data] control thread has finished
[2025-06-04 17:27:26] 2025-06-04 15:26:39,884 | INFO     | all payload control threads have been joined
[2025-06-04 17:27:26] 2025-06-04 15:26:39,997 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:27:26] 2025-06-04 15:26:40,081 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:27:26] 2025-06-04 15:26:40,161 | INFO     | [job] validate thread has finished
[2025-06-04 17:27:26] 2025-06-04 15:26:40,168 | INFO     | all job control threads have been joined
[2025-06-04 17:27:26] 2025-06-04 15:26:40,450 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:27:26] 2025-06-04 15:26:40,481 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:27:26] 2025-06-04 15:26:40,624 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:27:26] 2025-06-04 15:26:40,627 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:27:26] 2025-06-04 15:26:40,634 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:27:26] 2025-06-04 15:26:40,890 | INFO     | [payload] control thread has finished
[2025-06-04 17:27:26] 2025-06-04 15:26:41,114 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:27:26] 2025-06-04 15:26:41,174 | INFO     | [job] control thread has finished
[2025-06-04 17:27:26] 2025-06-04 15:26:41,385 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:27:26] 2025-06-04 15:26:41,629 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:27:26] 2025-06-04 15:26:45,391 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:27:26] 2025-06-04 15:26:47,399 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22761100879680)>', '<ExcThread(monitor, started 22760858277632)>']
[2025-06-04 17:27:26] 2025-06-04 15:26:47,994 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:27:26] 2025-06-04 15:26:47,995 | INFO     | [monitor] control thread has ended
[2025-06-04 17:27:26] 2025-06-04 15:26:52,424 | INFO     | all workflow threads have been joined
[2025-06-04 17:27:26] 2025-06-04 15:26:52,424 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:27:26] 2025-06-04 15:26:52,425 | INFO     | traces error code: 0
[2025-06-04 17:27:26] 2025-06-04 15:26:52,425 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:27:26] 2025-06-04 15:26:52,634 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:27:26] 2025-06-04 15:26:52,638 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:27:26] 2025-06-04 15:26:52,642 [wrapper] pilotpid: 1728393
[2025-06-04 17:27:26] 2025-06-04 15:26:52,645 [wrapper] Pilot exit status: 0
[2025-06-04 17:27:26] 2025-06-04 15:26:52,661 [wrapper] pandaids: 6677419894
[2025-06-04 17:27:26] 2025-06-04 15:26:52,800 [wrapper] cleanup supervisor_pilot 2188886 1728394
[2025-06-04 17:27:26] 2025-06-04 15:26:52,804 [wrapper] Test setup, not cleaning
[2025-06-04 17:27:26] 2025-06-04 15:26:52,808 [wrapper] apfmon messages muted
[2025-06-04 17:27:26] 2025-06-04 15:26:52,812 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:27:26] 2025-06-04 15:26:52,815 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:27:26]  *** Error codes and diagnostics ***
[2025-06-04 17:27:26]     "exeErrorCode": 0,
[2025-06-04 17:27:26]     "exeErrorDiag": "",
[2025-06-04 17:27:26]     "pilotErrorCode": 0,
[2025-06-04 17:27:26]     "pilotErrorDiag": "",
[2025-06-04 17:27:26]  *** Listing of results directory ***
[2025-06-04 17:27:26] total 389336
[2025-06-04 17:27:26] -rw-r--r-- 1 boinc boinc    495897 Jun  3 01:21 pilot3.tar.gz
[2025-06-04 17:27:26] -rw-r--r-- 1 boinc boinc      5111 Jun  3 01:40 queuedata.json
[2025-06-04 17:27:26] -rwx------ 1 boinc boinc     37140 Jun  3 01:40 runpilot2-wrapper.sh
[2025-06-04 17:27:26] -rw-r--r-- 1 boinc boinc       100 Jun  4 15:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:27:26] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 15:26 run_atlas
[2025-06-04 17:27:26] -rw-r--r-- 1 boinc boinc       105 Jun  4 15:26 job.xml
[2025-06-04 17:27:26] -rw-r--r-- 1 boinc boinc      6684 Jun  4 15:26 init_data.xml
[2025-06-04 17:27:26] -rw-r--r-- 2 boinc boinc 215740294 Jun  4 15:26 EVNT.45006593._000581.pool.root.1
[2025-06-04 17:27:26] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:26 start_atlas.sh
[2025-06-04 17:27:26] drwxrwx--x 2 boinc boinc      4096 Jun  4 15:26 shared
[2025-06-04 17:27:26] -rw-r--r-- 2 boinc boinc    508882 Jun  4 15:26 input.tar.gz
[2025-06-04 17:27:26] -rw-r--r-- 1 boinc boinc         0 Jun  4 15:26 boinc_lockfile
[2025-06-04 17:27:26] -rw-r--r-- 1 boinc boinc      2524 Jun  4 15:26 pandaJob.out
[2025-06-04 17:27:26] -rw------- 1 boinc boinc    986819 Jun  4 15:26 agis_schedconf.cvmfs.json
[2025-06-04 17:27:26] -rw------- 1 boinc boinc   1598969 Jun  4 15:26 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:27:26] drwx------ 4 boinc boinc      4096 Jun  4 15:26 pilot3
[2025-06-04 17:27:26] -rw------- 1 boinc boinc 177200287 Jun  4 17:25 HITS.45006595._014519.pool.root.1
[2025-06-04 17:27:26] -rw-r--r-- 1 boinc boinc       528 Jun  4 17:26 boinc_task_state.xml
[2025-06-04 17:27:26] -rw------- 1 boinc boinc      1043 Jun  4 17:26 memory_monitor_summary.json
[2025-06-04 17:27:26] -rw------- 1 boinc boinc    273396 Jun  4 17:26 log.45006595._014519.job.log.tgz.1
[2025-06-04 17:27:26] -rw------- 1 boinc boinc        95 Jun  4 17:26 pilot_heartbeat.json
[2025-06-04 17:27:26] -rw------- 1 boinc boinc      7700 Jun  4 17:26 heartbeat.json
[2025-06-04 17:27:26] -rw------- 1 boinc boinc      4365 Jun  4 17:26 pilotlog.txt
[2025-06-04 17:27:26] -rw------- 1 boinc boinc    682664 Jun  4 17:26 log.45006595._014519.job.log.1
[2025-06-04 17:27:26] -rw------- 1 boinc boinc       357 Jun  4 17:26 output.list
[2025-06-04 17:27:26] -rw-r--r-- 1 boinc boinc       620 Jun  4 17:26 runtime_log
[2025-06-04 17:27:26] -rw------- 1 boinc boinc    972800 Jun  4 17:26 result.tar.gz
[2025-06-04 17:27:26] -rw-r--r-- 1 boinc boinc      9040 Jun  4 17:26 runtime_log.err
[2025-06-04 17:27:26] -rw------- 1 boinc boinc       663 Jun  4 17:26 DiQODmNwTg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmsrWKDmRZbgjm.diag
[2025-06-04 17:27:26] -rw-r--r-- 1 boinc boinc      8192 Jun  4 17:27 boinc_mmap_file
[2025-06-04 17:27:26] -rw-r--r-- 1 boinc boinc        26 Jun  4 17:27 wrapper_checkpoint.txt
[2025-06-04 17:27:26] -rw-r--r-- 1 boinc boinc     20602 Jun  4 17:27 stderr.txt
[2025-06-04 17:27:26] HITS file was successfully produced:
[2025-06-04 17:27:26] -rw------- 1 boinc boinc 177200287 Jun  4 17:25 shared/HITS.pool.root.1
[2025-06-04 17:27:26]  *** Contents of shared directory: ***
[2025-06-04 17:27:26] total 385208
[2025-06-04 17:27:26] -rw-r--r-- 2 boinc boinc 215740294 Jun  4 15:26 ATLAS.root_0
[2025-06-04 17:27:26] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:26 start_atlas.sh
[2025-06-04 17:27:26] -rw-r--r-- 2 boinc boinc    508882 Jun  4 15:26 input.tar.gz
[2025-06-04 17:27:26] -rw------- 1 boinc boinc 177200287 Jun  4 17:25 HITS.pool.root.1
[2025-06-04 17:27:26] -rw------- 1 boinc boinc    972800 Jun  4 17:26 result.tar.gz
17:27:28 (1724410): run_atlas exited; CPU time 27905.461660
17:27:28 (1724410): called boinc_finish(0)

</stderr_txt>
]]>

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