Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:06:24 (949934): wrapper (7.7.26015): starting
13:06:24 (949934): wrapper: running run_atlas (--nthreads 2)
[2025-06-03 13:06:24] Arguments: --nthreads 2
[2025-06-03 13:06:24] Threads: 2
[2025-06-03 13:06:24] Checking for CVMFS
[2025-06-03 13:06:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:06:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:06:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:06:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:06:24] 2.9.2.0 729231 952 53792 146737 1 56 31590810 36864001 0 130560 0 590898 99.989 288635 73781 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-03 13:06:24] CVMFS is ok
[2025-06-03 13:06:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:06:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:06:24] Further information can be found at the LHC@home message board.
[2025-06-03 13:06:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:06:24] Checking for apptainer binary...
[2025-06-03 13:06:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:06:24] Running /usr/bin/apptainer --version
[2025-06-03 13:06:24] apptainer version 1.3.6-6.1
[2025-06-03 13:06:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:06:25] thA354a
[2025-06-03 13:06:25] apptainer works
[2025-06-03 13:06:25] Set ATHENA_PROC_NUMBER=2
[2025-06-03 13:06:25] Set ATHENA_CORE_NUMBER=2
[2025-06-03 13:06:25] Starting ATLAS job with PandaID=6677419674
[2025-06-03 13:06:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:53:34]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:53:34] 2025-06-03 12:53:14,562 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:53:34] 2025-06-03 12:53:14,562 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:53:34] 2025-06-03 12:53:14,563 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:53:34] 2025-06-03 12:53:14,563 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:53:34] 2025-06-03 12:53:14,563 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:53:34] 2025-06-03 12:53:14,563 | INFO     | sum of square deviations: 358927660.0
[2025-06-03 14:53:34] 2025-06-03 12:53:14,564 | INFO     | sum of deviations: -4145831938.0
[2025-06-03 14:53:34] 2025-06-03 12:53:14,564 | INFO     | mean x: 1748951999.0
[2025-06-03 14:53:34] 2025-06-03 12:53:14,564 | INFO     | mean y: 2296387.9523809524
[2025-06-03 14:53:34] 2025-06-03 12:53:14,564 | INFO     | -- intersect: 20203751621.25244
[2025-06-03 14:53:34] 2025-06-03 12:53:14,564 | INFO     | intersect: 20203751621.25244
[2025-06-03 14:53:34] 2025-06-03 12:53:14,564 | INFO     | chi2: 2.2808567426976762
[2025-06-03 14:53:34] 2025-06-03 12:53:14,564 | INFO     | sum of square deviations: 310052325.0
[2025-06-03 14:53:34] 2025-06-03 12:53:14,564 | INFO     | sum of deviations: 1649231654.5000021
[2025-06-03 14:53:34] 2025-06-03 12:53:14,564 | INFO     | mean x: 1748951846.5
[2025-06-03 14:53:34] 2025-06-03 12:53:14,564 | INFO     | mean y: 2313772.77
[2025-06-03 14:53:34] 2025-06-03 12:53:14,564 | INFO     | -- intersect: -9300718376.542309
[2025-06-03 14:53:34] 2025-06-03 12:53:14,564 | INFO     | intersect: -9300718376.542309
[2025-06-03 14:53:34] 2025-06-03 12:53:14,564 | INFO     | chi2: 1.6627555853711746
[2025-06-03 14:53:34] 2025-06-03 12:53:14,564 | INFO     | current chi2=1.6627555853711746 (change=27.099516850648165 %)
[2025-06-03 14:53:34] 2025-06-03 12:53:14,565 | INFO     | sum of square deviations: 265828240.0
[2025-06-03 14:53:34] 2025-06-03 12:53:14,565 | INFO     | sum of deviations: 1564085140.0000005
[2025-06-03 14:53:34] 2025-06-03 12:53:14,565 | INFO     | mean x: 1748951694.0
[2025-06-03 14:53:34] 2025-06-03 12:53:14,565 | INFO     | mean y: 2313479.136842105
[2025-06-03 14:53:34] 2025-06-03 12:53:14,565 | INFO     | -- intersect: -10288201009.328445
[2025-06-03 14:53:34] 2025-06-03 12:53:14,565 | INFO     | intersect: -10288201009.328445
[2025-06-03 14:53:34] 2025-06-03 12:53:14,565 | INFO     | chi2: 1.664106808640565
[2025-06-03 14:53:34] 2025-06-03 12:53:14,565 | INFO     | current chi2=1.664106808640565 (change=-0.08126409445130685 %)
[2025-06-03 14:53:34] 2025-06-03 12:53:14,565 | INFO     | right removable region: 94
[2025-06-03 14:53:34] 2025-06-03 12:53:14,565 | INFO     | sum of square deviations: 310052325.0
[2025-06-03 14:53:34] 2025-06-03 12:53:14,565 | INFO     | sum of deviations: -15771455206.0
[2025-06-03 14:53:34] 2025-06-03 12:53:14,565 | INFO     | mean x: 1748952151.5
[2025-06-03 14:53:34] 2025-06-03 12:53:14,565 | INFO     | mean y: 2331464.2
[2025-06-03 14:53:34] 2025-06-03 12:53:14,565 | INFO     | -- intersect: 88966413622.97618
[2025-06-03 14:53:34] 2025-06-03 12:53:14,565 | INFO     | intersect: 88966413622.97618
[2025-06-03 14:53:34] 2025-06-03 12:53:14,565 | INFO     | chi2: 0.8602101447131225
[2025-06-03 14:53:34] 2025-06-03 12:53:14,565 | INFO     | current chi2=0.8602101447131225 (change=62.2856565864057 %)
[2025-06-03 14:53:34] 2025-06-03 12:53:14,566 | INFO     | sum of square deviations: 265828240.0
[2025-06-03 14:53:34] 2025-06-03 12:53:14,566 | INFO     | sum of deviations: -10509052184.0
[2025-06-03 14:53:34] 2025-06-03 12:53:14,566 | INFO     | mean x: 1748952304.0
[2025-06-03 14:53:34] 2025-06-03 12:53:14,566 | INFO     | mean y: 2313290.642105263
[2025-06-03 14:53:34] 2025-06-03 12:53:14,566 | INFO     | -- intersect: 69144068245.13089
[2025-06-03 14:53:34] 2025-06-03 12:53:14,566 | INFO     | intersect: 69144068245.13089
[2025-06-03 14:53:34] 2025-06-03 12:53:14,566 | INFO     | chi2: 0.8109217866694965
[2025-06-03 14:53:34] 2025-06-03 12:53:14,566 | INFO     | current chi2=0.8109217866694965 (change=5.729804321252627 %)
[2025-06-03 14:53:34] 2025-06-03 12:53:14,566 | INFO     | left removable region: 20
[2025-06-03 14:53:34] 2025-06-03 12:53:14,566 | INFO     | sum of square deviations: 125630262.5
[2025-06-03 14:53:34] 2025-06-03 12:53:14,566 | INFO     | sum of deviations: 1330539899.5
[2025-06-03 14:53:34] 2025-06-03 12:53:14,566 | INFO     | mean x: 1748952273.5
[2025-06-03 14:53:34] 2025-06-03 12:53:14,566 | INFO     | mean y: 2303837.6621621624
[2025-06-03 14:53:34] 2025-06-03 12:53:14,566 | INFO     | -- intersect: -18520707544.35247
[2025-06-03 14:53:34] 2025-06-03 12:53:14,566 | INFO     | intersect: -18520707544.35247
[2025-06-03 14:53:34] 2025-06-03 12:53:14,566 | INFO     | chi2: 0.00027366892710065744
[2025-06-03 14:53:34] 2025-06-03 12:53:14,566 | INFO     | -- intersect: -18520707544.35247
[2025-06-03 14:53:34] 2025-06-03 12:53:14,566 | INFO     | current memory leak: 10.59 B/s (using 74 data points, chi2=0.00)
[2025-06-03 14:53:34] 2025-06-03 12:53:14,567 | INFO     | ..............................
[2025-06-03 14:53:34] 2025-06-03 12:53:14,567 | INFO     | . Timing measurements:
[2025-06-03 14:53:34] 2025-06-03 12:53:14,567 | INFO     | . get job = 0 s
[2025-06-03 14:53:34] 2025-06-03 12:53:14,567 | INFO     | . initial setup = 1 s
[2025-06-03 14:53:34] 2025-06-03 12:53:14,567 | INFO     | . payload setup = 8 s
[2025-06-03 14:53:34] 2025-06-03 12:53:14,567 | INFO     | . stage-in = 0 s
[2025-06-03 14:53:34] 2025-06-03 12:53:14,567 | INFO     | . payload execution = 6354 s
[2025-06-03 14:53:34] 2025-06-03 12:53:14,567 | INFO     | . stage-out = 0 s
[2025-06-03 14:53:34] 2025-06-03 12:53:14,567 | INFO     | . log creation = 0 s
[2025-06-03 14:53:34] 2025-06-03 12:53:14,567 | INFO     | ..............................
[2025-06-03 14:53:34] 2025-06-03 12:53:14,596 | INFO     | 
[2025-06-03 14:53:34] 2025-06-03 12:53:14,596 | INFO     | job summary report
[2025-06-03 14:53:34] 2025-06-03 12:53:14,596 | INFO     | --------------------------------------------------
[2025-06-03 14:53:34] 2025-06-03 12:53:14,596 | INFO     | PanDA job id: 6677419674
[2025-06-03 14:53:34] 2025-06-03 12:53:14,596 | INFO     | task id: 45006595
[2025-06-03 14:53:34] 2025-06-03 12:53:14,596 | INFO     | errors: (none)
[2025-06-03 14:53:34] 2025-06-03 12:53:14,596 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:53:34] 2025-06-03 12:53:14,597 | INFO     | pilot state: finished 
[2025-06-03 14:53:34] 2025-06-03 12:53:14,597 | INFO     | transexitcode: 0
[2025-06-03 14:53:34] 2025-06-03 12:53:14,597 | INFO     | exeerrorcode: 0
[2025-06-03 14:53:34] 2025-06-03 12:53:14,597 | INFO     | exeerrordiag: 
[2025-06-03 14:53:34] 2025-06-03 12:53:14,597 | INFO     | exitcode: 0
[2025-06-03 14:53:34] 2025-06-03 12:53:14,597 | INFO     | exitmsg: OK
[2025-06-03 14:53:34] 2025-06-03 12:53:14,597 | INFO     | cpuconsumptiontime: 12356 s
[2025-06-03 14:53:34] 2025-06-03 12:53:14,597 | INFO     | nevents: 400
[2025-06-03 14:53:34] 2025-06-03 12:53:14,597 | INFO     | neventsw: 0
[2025-06-03 14:53:34] 2025-06-03 12:53:14,597 | INFO     | pid: 960024
[2025-06-03 14:53:34] 2025-06-03 12:53:14,597 | INFO     | pgrp: 960024
[2025-06-03 14:53:34] 2025-06-03 12:53:14,597 | INFO     | corecount: 2
[2025-06-03 14:53:34] 2025-06-03 12:53:14,597 | INFO     | event service: False
[2025-06-03 14:53:34] 2025-06-03 12:53:14,597 | INFO     | sizes: {0: 2405185, 7: 2405391, 11: 2405419, 6366: 2432399, 6367: 2441346, 6370: 2441402, 6378: 2441700}
[2025-06-03 14:53:34] 2025-06-03 12:53:14,597 | INFO     | --------------------------------------------------
[2025-06-03 14:53:34] 2025-06-03 12:53:14,597 | INFO     | 
[2025-06-03 14:53:34] 2025-06-03 12:53:14,597 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-03 14:53:34] 2025-06-03 12:53:14,608 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:53:34] 2025-06-03 12:53:14,608 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:53:34] 2025-06-03 12:53:14,608 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:53:34] 2025-06-03 12:53:14,608 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:53:34] 2025-06-03 12:53:14,608 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:53:34] 2025-06-03 12:53:14,608 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:53:34] 2025-06-03 12:53:14,608 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:53:34] 2025-06-03 12:53:14,608 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:53:34] 2025-06-03 12:53:14,609 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:53:34] 2025-06-03 12:53:14,609 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:53:34] 2025-06-03 12:53:14,609 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:53:34] 2025-06-03 12:53:14,609 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:53:34] 2025-06-03 12:53:14,609 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:53:34] 2025-06-03 12:53:14,609 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:53:34] 2025-06-03 12:53:14,609 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:53:34] 2025-06-03 12:53:14,609 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:53:34] 2025-06-03 12:53:14,609 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:53:34] 2025-06-03 12:53:14,609 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:53:34] 2025-06-03 12:53:14,609 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:53:34] 2025-06-03 12:53:14,609 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:53:34] 2025-06-03 12:53:14,609 | INFO     | job 6677419674 has completed (purged errors)
[2025-06-03 14:53:34] 2025-06-03 12:53:14,609 | INFO     | overall cleanup function is called
[2025-06-03 14:53:34] 2025-06-03 12:53:15,615 | INFO     | --- collectZombieJob: --- 10, [960024]
[2025-06-03 14:53:34] 2025-06-03 12:53:15,616 | INFO     | zombie collector waiting for pid 960024
[2025-06-03 14:53:34] 2025-06-03 12:53:15,616 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:53:34] 2025-06-03 12:53:15,616 | INFO     | collected zombie processes
[2025-06-03 14:53:34] 2025-06-03 12:53:15,616 | INFO     | will attempt to kill all subprocesses of pid=960024
[2025-06-03 14:53:34] 2025-06-03 12:53:15,649 | INFO     | process IDs to be killed: [960024] (in reverse order)
[2025-06-03 14:53:34] 2025-06-03 12:53:15,671 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:53:34] 2025-06-03 12:53:15,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:53:34] 2025-06-03 12:53:15,672 | INFO     | did not find any defunct processes belonging to 960024
[2025-06-03 14:53:34] 2025-06-03 12:53:15,673 | INFO     | did not find any defunct processes belonging to 960024
[2025-06-03 14:53:34] 2025-06-03 12:53:15,673 | INFO     | ready for new job
[2025-06-03 14:53:34] 2025-06-03 12:53:15,673 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:53:34] 2025-06-03 12:53:15,673 | INFO     | **************************************
[2025-06-03 14:53:34] 2025-06-03 12:53:15,673 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:53:34] 2025-06-03 12:53:15,673 | INFO     | **************************************
[2025-06-03 14:53:34] 2025-06-03 12:53:15,673 | INFO     | 
[2025-06-03 14:53:34] 2025-06-03 12:53:15,674 | INFO     | architecture information:
[2025-06-03 14:53:34] 2025-06-03 12:53:15,674 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:53:34] 2025-06-03 12:53:15,683 | INFO     | cat /etc/os-release:
[2025-06-03 14:53:34] NAME="CentOS Linux"
[2025-06-03 14:53:34] VERSION="7 (Core)"
[2025-06-03 14:53:34] ID="centos"
[2025-06-03 14:53:34] ID_LIKE="rhel fedora"
[2025-06-03 14:53:34] VERSION_ID="7"
[2025-06-03 14:53:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:53:34] ANSI_COLOR="0;31"
[2025-06-03 14:53:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:53:34] HOME_URL="https://www.centos.org/"
[2025-06-03 14:53:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:53:34] 
[2025-06-03 14:53:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:53:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:53:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:53:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:53:34] 
[2025-06-03 14:53:34] 2025-06-03 12:53:15,683 | INFO     | **************************************
[2025-06-03 14:53:34] 2025-06-03 12:53:16,186 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-03 14:53:34] 2025-06-03 12:53:16,198 | INFO     | sufficient remaining disk space (192655917056 B)
[2025-06-03 14:53:34] 2025-06-03 12:53:16,198 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:53:34] 2025-06-03 12:53:16,198 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:53:34] 2025-06-03 12:53:16,198 | INFO     | update_server=False
[2025-06-03 14:53:34] 2025-06-03 12:53:16,198 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:53:34] 2025-06-03 12:53:16,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:53:34] 2025-06-03 12:53:16,198 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:53:34] 2025-06-03 12:53:16,464 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:53:34] 2025-06-03 12:53:16,465 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:53:34] 2025-06-03 12:53:16,465 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:53:34] 2025-06-03 12:53:16,527 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:53:34] 2025-06-03 12:53:16,596 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 14:53:34] 2025-06-03 12:53:16,596 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 14:53:34] 2025-06-03 12:53:16,596 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:53:34] 2025-06-03 12:53:16,597 | INFO     | will abort loop
[2025-06-03 14:53:34] 2025-06-03 12:53:16,808 | INFO     | all data control threads have been joined
[2025-06-03 14:53:34] 2025-06-03 12:53:16,910 | INFO     | all job control threads have been joined
[2025-06-03 14:53:34] 2025-06-03 12:53:17,204 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:53:34] 2025-06-03 12:53:17,204 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:53:34] 2025-06-03 12:53:17,267 | INFO     | all payload control threads have been joined
[2025-06-03 14:53:34] 2025-06-03 12:53:17,328 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:53:34] 2025-06-03 12:53:17,399 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:53:34] 2025-06-03 12:53:17,603 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:53:34] 2025-06-03 12:53:17,662 | INFO     | [job] validate thread has finished
[2025-06-03 14:53:34] 2025-06-03 12:53:17,685 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:53:34] 2025-06-03 12:53:17,751 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:53:34] 2025-06-03 12:53:17,814 | INFO     | [data] control thread has finished
[2025-06-03 14:53:34] 2025-06-03 12:53:17,870 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:53:34] 2025-06-03 12:53:17,916 | INFO     | [job] control thread has finished
[2025-06-03 14:53:34] 2025-06-03 12:53:18,157 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:53:34] 2025-06-03 12:53:18,204 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:53:34] 2025-06-03 12:53:18,273 | INFO     | [payload] control thread has finished
[2025-06-03 14:53:34] 2025-06-03 12:53:20,534 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:53:34] 2025-06-03 12:53:26,480 | INFO     | job.realtimelogging is not enabled
[2025-06-03 14:53:34] 2025-06-03 12:53:27,486 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:53:34] 2025-06-03 12:53:29,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140354035812160)>', '<ExcThread(monitor, started 140352887453440)>']
[2025-06-03 14:53:34] 2025-06-03 12:53:29,535 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:53:34] 2025-06-03 12:53:29,535 | INFO     | [monitor] control thread has ended
[2025-06-03 14:53:34] 2025-06-03 12:53:34,244 | INFO     | all workflow threads have been joined
[2025-06-03 14:53:34] 2025-06-03 12:53:34,244 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:53:34] 2025-06-03 12:53:34,245 | INFO     | traces error code: 0
[2025-06-03 14:53:34] 2025-06-03 12:53:34,245 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:53:34] 2025-06-03 12:53:34,286 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:53:34] 2025-06-03 12:53:34,290 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:53:34] 2025-06-03 12:53:34,292 [wrapper] pilotpid: 953559
[2025-06-03 14:53:34] 2025-06-03 12:53:34,294 [wrapper] Pilot exit status: 0
[2025-06-03 14:53:34] 2025-06-03 12:53:34,301 [wrapper] pandaids: 6677419674
[2025-06-03 14:53:34] 2025-06-03 12:53:34,313 [wrapper] cleanup supervisor_pilot  974469 953560
[2025-06-03 14:53:34] 2025-06-03 12:53:34,315 [wrapper] Test setup, not cleaning
[2025-06-03 14:53:34] 2025-06-03 12:53:34,317 [wrapper] apfmon messages muted
[2025-06-03 14:53:34] 2025-06-03 12:53:34,319 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:53:34] 2025-06-03 12:53:34,321 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:53:34]  *** Error codes and diagnostics ***
[2025-06-03 14:53:34]     "exeErrorCode": 0,
[2025-06-03 14:53:34]     "exeErrorDiag": "",
[2025-06-03 14:53:34]     "pilotErrorCode": 0,
[2025-06-03 14:53:34]     "pilotErrorDiag": "",
[2025-06-03 14:53:34]  *** Listing of results directory ***
[2025-06-03 14:53:34] total 392268
[2025-06-03 14:53:34] -rw-r--r-- 1 boinc boinc    495897 Jun  3 01:21 pilot3.tar.gz
[2025-06-03 14:53:34] -rw-r--r-- 1 boinc boinc      5111 Jun  3 01:31 queuedata.json
[2025-06-03 14:53:34] -rwx------ 1 boinc boinc     37140 Jun  3 01:33 runpilot2-wrapper.sh
[2025-06-03 14:53:34] -rw-r--r-- 1 boinc boinc       100 Jun  3 13:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:53:34] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 13:06 run_atlas
[2025-06-03 14:53:34] -rw-r--r-- 1 boinc boinc       105 Jun  3 13:06 job.xml
[2025-06-03 14:53:34] -rw-r--r-- 2 boinc boinc 219701979 Jun  3 13:06 EVNT.45006593._000574.pool.root.1
[2025-06-03 14:53:34] -rw-r--r-- 1 boinc boinc      6690 Jun  3 13:06 init_data.xml
[2025-06-03 14:53:34] drwxrwx--x 2 boinc boinc      4096 Jun  3 13:06 shared
[2025-06-03 14:53:34] -rw-r--r-- 2 boinc boinc    508877 Jun  3 13:06 input.tar.gz
[2025-06-03 14:53:34] -rw-r--r-- 2 boinc boinc     15093 Jun  3 13:06 start_atlas.sh
[2025-06-03 14:53:34] -rw-r--r-- 1 boinc boinc         0 Jun  3 13:06 boinc_lockfile
[2025-06-03 14:53:34] -rw-r--r-- 1 boinc boinc      2524 Jun  3 13:06 pandaJob.out
[2025-06-03 14:53:34] -rw------- 1 boinc boinc    985490 Jun  3 13:06 agis_schedconf.cvmfs.json
[2025-06-03 14:53:34] -rw------- 1 boinc boinc   1603667 Jun  3 13:06 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:53:34] drwx------ 4 boinc boinc      4096 Jun  3 13:06 pilot3
[2025-06-03 14:53:34] -rw------- 1 boinc boinc 176466875 Jun  3 14:52 HITS.45006595._014344.pool.root.1
[2025-06-03 14:53:34] -rw-r--r-- 1 boinc boinc       530 Jun  3 14:52 boinc_task_state.xml
[2025-06-03 14:53:34] -rw------- 1 boinc boinc      1016 Jun  3 14:52 memory_monitor_summary.json
[2025-06-03 14:53:34] -rw------- 1 boinc boinc    230352 Jun  3 14:53 log.45006595._014344.job.log.tgz.1
[2025-06-03 14:53:34] -rw------- 1 boinc boinc        95 Jun  3 14:53 pilot_heartbeat.json
[2025-06-03 14:53:34] -rw------- 1 boinc boinc      7653 Jun  3 14:53 heartbeat.json
[2025-06-03 14:53:34] -rw-r--r-- 1 boinc boinc      8192 Jun  3 14:53 boinc_mmap_file
[2025-06-03 14:53:34] -rw-r--r-- 1 boinc boinc        27 Jun  3 14:53 wrapper_checkpoint.txt
[2025-06-03 14:53:34] -rw------- 1 boinc boinc      4615 Jun  3 14:53 pilotlog.txt
[2025-06-03 14:53:34] -rw------- 1 boinc boinc    609471 Jun  3 14:53 log.45006595._014344.job.log.1
[2025-06-03 14:53:34] -rw------- 1 boinc boinc       357 Jun  3 14:53 output.list
[2025-06-03 14:53:34] -rw-r--r-- 1 boinc boinc       620 Jun  3 14:53 runtime_log
[2025-06-03 14:53:34] -rw------- 1 boinc boinc    860160 Jun  3 14:53 result.tar.gz
[2025-06-03 14:53:34] -rw-r--r-- 1 boinc boinc      8738 Jun  3 14:53 runtime_log.err
[2025-06-03 14:53:34] -rw------- 1 boinc boinc       660 Jun  3 14:53 o13LDmypTg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm58gKDmOpHKfn.diag
[2025-06-03 14:53:34] -rw-r--r-- 1 boinc boinc     20706 Jun  3 14:53 stderr.txt
[2025-06-03 14:53:34] HITS file was successfully produced:
[2025-06-03 14:53:34] -rw------- 1 boinc boinc 176466875 Jun  3 14:52 shared/HITS.pool.root.1
[2025-06-03 14:53:34]  *** Contents of shared directory: ***
[2025-06-03 14:53:34] total 388248
[2025-06-03 14:53:34] -rw-r--r-- 2 boinc boinc 219701979 Jun  3 13:06 ATLAS.root_0
[2025-06-03 14:53:34] -rw-r--r-- 2 boinc boinc    508877 Jun  3 13:06 input.tar.gz
[2025-06-03 14:53:34] -rw-r--r-- 2 boinc boinc     15093 Jun  3 13:06 start_atlas.sh
[2025-06-03 14:53:34] -rw------- 1 boinc boinc 176466875 Jun  3 14:52 HITS.pool.root.1
[2025-06-03 14:53:34] -rw------- 1 boinc boinc    860160 Jun  3 14:53 result.tar.gz
14:53:35 (949934): run_atlas exited; CPU time 12382.544979
14:53:35 (949934): called boinc_finish(0)

</stderr_txt>
]]>

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