Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:37:21 (11125): wrapper (7.7.26015): starting
13:37:21 (11125): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:37:21] Arguments: --nthreads 8
[2025-06-03 13:37:21] Threads: 8
[2025-06-03 13:37:21] Checking for CVMFS
[2025-06-03 13:37:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:37:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:37:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:37:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:37:24] 2.11.2.0 17186 31883 102520 146741 3 59 14815274 25165825 3874 130560 0 16756232 99.868 17569092 2024 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 13:37:24] CVMFS is ok
[2025-06-03 13:37:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:37:24] Checking for apptainer binary...
[2025-06-03 13:37:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:37:24] Running /usr/bin/apptainer --version
[2025-06-03 13:37:24] apptainer version 1.3.2-1.el7
[2025-06-03 13:37:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:37:32] cg-vwn311.simple-grid.lan
[2025-06-03 13:37:32] apptainer works
[2025-06-03 13:37:32] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:37:32] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:37:32] Starting ATLAS job with PandaID=6677419453
[2025-06-03 13:37:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:40:25]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:40:25] 2025-06-03 15:39:23,420 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:40:25] 2025-06-03 15:39:23,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:40:25] 2025-06-03 15:39:23,421 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:40:25] 2025-06-03 15:39:23,426 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:40:25] 2025-06-03 15:39:23,427 | INFO     | sum of square deviations: 3579276412.5
[2025-06-03 17:40:25] 2025-06-03 15:39:23,428 | INFO     | sum of deviations: 13060692981.000013
[2025-06-03 17:40:25] 2025-06-03 15:39:23,429 | INFO     | mean x: 1748958187.5
[2025-06-03 17:40:25] 2025-06-03 15:39:23,429 | INFO     | mean y: 2513168.1592920353
[2025-06-03 17:40:25] 2025-06-03 15:39:23,429 | INFO     | -- intersect: -6379392918.716237
[2025-06-03 17:40:25] 2025-06-03 15:39:23,429 | INFO     | intersect: -6379392918.716237
[2025-06-03 17:40:25] 2025-06-03 15:39:23,429 | INFO     | chi2: 6.9430971372244015
[2025-06-03 17:40:25] 2025-06-03 15:39:23,430 | INFO     | sum of square deviations: 3346927870.0
[2025-06-03 17:40:25] 2025-06-03 15:39:23,432 | INFO     | sum of deviations: 29640986226.999992
[2025-06-03 17:40:25] 2025-06-03 15:39:23,432 | INFO     | mean x: 1748958035.0
[2025-06-03 17:40:25] 2025-06-03 15:39:23,432 | INFO     | mean y: 2523868.21719457
[2025-06-03 17:40:25] 2025-06-03 15:39:23,432 | INFO     | -- intersect: -15486558370.963528
[2025-06-03 17:40:25] 2025-06-03 15:39:23,432 | INFO     | intersect: -15486558370.963528
[2025-06-03 17:40:25] 2025-06-03 15:39:23,433 | INFO     | chi2: 6.17186906436556
[2025-06-03 17:40:25] 2025-06-03 15:39:23,433 | INFO     | current chi2=6.17186906436556 (change=11.107839305949138 %)
[2025-06-03 17:40:25] 2025-06-03 15:39:23,433 | INFO     | right removable region: 220
[2025-06-03 17:40:25] 2025-06-03 15:39:23,433 | INFO     | sum of square deviations: 3346927870.0
[2025-06-03 17:40:25] 2025-06-03 15:39:23,435 | INFO     | sum of deviations: -67751743214.999985
[2025-06-03 17:40:25] 2025-06-03 15:39:23,436 | INFO     | mean x: 1748958340.0
[2025-06-03 17:40:25] 2025-06-03 15:39:23,436 | INFO     | mean y: 2566162.5339366514
[2025-06-03 17:40:25] 2025-06-03 15:39:23,436 | INFO     | -- intersect: 35406668356.529724
[2025-06-03 17:40:25] 2025-06-03 15:39:23,436 | INFO     | intersect: 35406668356.529724
[2025-06-03 17:40:25] 2025-06-03 15:39:23,436 | INFO     | chi2: 2.0511460761047453
[2025-06-03 17:40:25] 2025-06-03 15:39:23,437 | INFO     | current chi2=2.0511460761047453 (change=70.45776494890407 %)
[2025-06-03 17:40:25] 2025-06-03 15:39:23,437 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 17:40:25] 2025-06-03 15:39:23,439 | INFO     | sum of deviations: -97437792734.5
[2025-06-03 17:40:25] 2025-06-03 15:39:23,439 | INFO     | mean x: 1748958492.5
[2025-06-03 17:40:25] 2025-06-03 15:39:23,439 | INFO     | mean y: 2586392.1157407407
[2025-06-03 17:40:25] 2025-06-03 15:39:23,439 | INFO     | -- intersect: 54537743803.33753
[2025-06-03 17:40:25] 2025-06-03 15:39:23,439 | INFO     | intersect: 54537743803.33753
[2025-06-03 17:40:25] 2025-06-03 15:39:23,440 | INFO     | chi2: 1.089578331579462
[2025-06-03 17:40:25] 2025-06-03 15:39:23,440 | INFO     | current chi2=1.089578331579462 (change=46.8795350914919 %)
[2025-06-03 17:40:25] 2025-06-03 15:39:23,440 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 17:40:25] 2025-06-03 15:39:23,442 | INFO     | sum of deviations: -99223708675.0
[2025-06-03 17:40:25] 2025-06-03 15:39:23,442 | INFO     | mean x: 1748958645.0
[2025-06-03 17:40:25] 2025-06-03 15:39:23,443 | INFO     | mean y: 2587639.616113744
[2025-06-03 17:40:25] 2025-06-03 15:39:23,443 | INFO     | -- intersect: 59579632993.467926
[2025-06-03 17:40:25] 2025-06-03 15:39:23,443 | INFO     | intersect: 59579632993.467926
[2025-06-03 17:40:25] 2025-06-03 15:39:23,443 | INFO     | chi2: 1.0399910427707941
[2025-06-03 17:40:25] 2025-06-03 15:39:23,443 | INFO     | current chi2=1.0399910427707941 (change=4.551053134177674 %)
[2025-06-03 17:40:25] 2025-06-03 15:39:23,443 | INFO     | left removable region: 30
[2025-06-03 17:40:25] 2025-06-03 15:39:23,444 | INFO     | sum of square deviations: 2126802667.5
[2025-06-03 17:40:25] 2025-06-03 15:39:23,445 | INFO     | sum of deviations: -67223240373.99999
[2025-06-03 17:40:25] 2025-06-03 15:39:23,445 | INFO     | mean x: 1748958919.5
[2025-06-03 17:40:25] 2025-06-03 15:39:23,446 | INFO     | mean y: 2590042.9263157896
[2025-06-03 17:40:25] 2025-06-03 15:39:23,446 | INFO     | -- intersect: 55283076402.29365
[2025-06-03 17:40:25] 2025-06-03 15:39:23,446 | INFO     | intersect: 55283076402.29365
[2025-06-03 17:40:25] 2025-06-03 15:39:23,446 | INFO     | chi2: 0.17496530315125375
[2025-06-03 17:40:25] 2025-06-03 15:39:23,446 | INFO     | -- intersect: 55283076402.29365
[2025-06-03 17:40:25] 2025-06-03 15:39:23,447 | INFO     | current memory leak: -31.61 B/s (using 190 data points, chi2=0.17)
[2025-06-03 17:40:25] 2025-06-03 15:39:23,447 | INFO     | ..............................
[2025-06-03 17:40:25] 2025-06-03 15:39:23,448 | INFO     | . Timing measurements:
[2025-06-03 17:40:25] 2025-06-03 15:39:23,448 | INFO     | . get job = 0 s
[2025-06-03 17:40:25] 2025-06-03 15:39:23,448 | INFO     | . initial setup = 5 s
[2025-06-03 17:40:25] 2025-06-03 15:39:23,448 | INFO     | . payload setup = 148 s
[2025-06-03 17:40:25] 2025-06-03 15:39:23,448 | INFO     | . stage-in = 0 s
[2025-06-03 17:40:25] 2025-06-03 15:39:23,448 | INFO     | . payload execution = 13900 s
[2025-06-03 17:40:25] 2025-06-03 15:39:23,448 | INFO     | . stage-out = 4 s
[2025-06-03 17:40:25] 2025-06-03 15:39:23,448 | INFO     | . log creation = 1 s
[2025-06-03 17:40:25] 2025-06-03 15:39:23,448 | INFO     | ..............................
[2025-06-03 17:40:25] 2025-06-03 15:39:23,866 | INFO     | 
[2025-06-03 17:40:25] 2025-06-03 15:39:23,866 | INFO     | job summary report
[2025-06-03 17:40:25] 2025-06-03 15:39:23,867 | INFO     | --------------------------------------------------
[2025-06-03 17:40:25] 2025-06-03 15:39:23,867 | INFO     | PanDA job id: 6677419453
[2025-06-03 17:40:25] 2025-06-03 15:39:23,867 | INFO     | task id: 45006595
[2025-06-03 17:40:25] 2025-06-03 15:39:23,867 | INFO     | errors: (none)
[2025-06-03 17:40:25] 2025-06-03 15:39:23,867 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:40:25] 2025-06-03 15:39:23,867 | INFO     | pilot state: finished 
[2025-06-03 17:40:25] 2025-06-03 15:39:23,867 | INFO     | transexitcode: 0
[2025-06-03 17:40:25] 2025-06-03 15:39:23,867 | INFO     | exeerrorcode: 0
[2025-06-03 17:40:25] 2025-06-03 15:39:23,867 | INFO     | exeerrordiag: 
[2025-06-03 17:40:25] 2025-06-03 15:39:23,867 | INFO     | exitcode: 0
[2025-06-03 17:40:25] 2025-06-03 15:39:23,868 | INFO     | exitmsg: OK
[2025-06-03 17:40:25] 2025-06-03 15:39:23,868 | INFO     | cpuconsumptiontime: 49581 s
[2025-06-03 17:40:25] 2025-06-03 15:39:23,868 | INFO     | nevents: 400
[2025-06-03 17:40:25] 2025-06-03 15:39:23,868 | INFO     | neventsw: 0
[2025-06-03 17:40:25] 2025-06-03 15:39:23,868 | INFO     | pid: 25643
[2025-06-03 17:40:25] 2025-06-03 15:39:23,868 | INFO     | pgrp: 25643
[2025-06-03 17:40:25] 2025-06-03 15:39:23,868 | INFO     | corecount: 8
[2025-06-03 17:40:25] 2025-06-03 15:39:23,868 | INFO     | event service: False
[2025-06-03 17:40:25] 2025-06-03 15:39:23,868 | INFO     | sizes: {0: 2405011, 1: 2405210, 12: 2405210, 23: 2405238, 33: 2405266, 44: 2405322, 55: 2405478, 66: 2405506, 76: 2405534, 82: 2405796, 87: 2405852, 14053: 2435862
[2025-06-03 17:40:25] 2025-06-03 15:39:23,869 | INFO     | --------------------------------------------------
[2025-06-03 17:40:25] 2025-06-03 15:39:23,869 | INFO     | 
[2025-06-03 17:40:25] 2025-06-03 15:39:23,869 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-03 17:40:25] 2025-06-03 15:39:23,899 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:40:25] 2025-06-03 15:39:23,899 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:40:25] 2025-06-03 15:39:23,899 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:40:25] 2025-06-03 15:39:23,899 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:40:25] 2025-06-03 15:39:23,899 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:40:25] 2025-06-03 15:39:23,899 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:40:25] 2025-06-03 15:39:23,900 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:40:25] 2025-06-03 15:39:23,900 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:40:25] 2025-06-03 15:39:23,900 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:40:25] 2025-06-03 15:39:23,900 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:40:25] 2025-06-03 15:39:23,900 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:40:25] 2025-06-03 15:39:23,900 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:40:25] 2025-06-03 15:39:23,900 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:40:25] 2025-06-03 15:39:23,900 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:40:25] 2025-06-03 15:39:23,900 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:40:25] 2025-06-03 15:39:23,900 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:40:25] 2025-06-03 15:39:23,901 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:40:25] 2025-06-03 15:39:23,901 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:40:25] 2025-06-03 15:39:23,901 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:40:25] 2025-06-03 15:39:23,901 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:40:25] 2025-06-03 15:39:23,901 | INFO     | job 6677419453 has completed (purged errors)
[2025-06-03 17:40:25] 2025-06-03 15:39:23,901 | INFO     | overall cleanup function is called
[2025-06-03 17:40:25] 2025-06-03 15:39:24,911 | INFO     | --- collectZombieJob: --- 10, [25643]
[2025-06-03 17:40:25] 2025-06-03 15:39:24,911 | INFO     | zombie collector waiting for pid 25643
[2025-06-03 17:40:25] 2025-06-03 15:39:24,911 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:40:25] 2025-06-03 15:39:24,912 | INFO     | collected zombie processes
[2025-06-03 17:40:25] 2025-06-03 15:39:24,912 | INFO     | will attempt to kill all subprocesses of pid=25643
[2025-06-03 17:40:25] 2025-06-03 15:39:25,021 | INFO     | process IDs to be killed: [25643] (in reverse order)
[2025-06-03 17:40:25] 2025-06-03 15:39:25,676 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:40:25] 2025-06-03 15:39:25,676 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:40:25] 2025-06-03 15:39:25,679 | INFO     | did not find any defunct processes belonging to 25643
[2025-06-03 17:40:25] 2025-06-03 15:39:25,682 | INFO     | did not find any defunct processes belonging to 25643
[2025-06-03 17:40:25] 2025-06-03 15:39:25,683 | INFO     | ready for new job
[2025-06-03 17:40:25] 2025-06-03 15:39:25,683 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:40:25] 2025-06-03 15:39:25,685 | INFO     | **************************************
[2025-06-03 17:40:25] 2025-06-03 15:39:25,685 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:40:25] 2025-06-03 15:39:25,685 | INFO     | **************************************
[2025-06-03 17:40:25] 2025-06-03 15:39:25,685 | INFO     | 
[2025-06-03 17:40:25] 2025-06-03 15:39:25,686 | INFO     | pilot is running in a VM
[2025-06-03 17:40:25] 2025-06-03 15:39:25,686 | INFO     | architecture information:
[2025-06-03 17:40:25] 2025-06-03 15:39:25,693 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:40:25] 2025-06-03 15:39:25,924 | INFO     | cat /etc/os-release:
[2025-06-03 17:40:25] NAME="CentOS Linux"
[2025-06-03 17:40:25] VERSION="7 (Core)"
[2025-06-03 17:40:25] ID="centos"
[2025-06-03 17:40:25] ID_LIKE="rhel fedora"
[2025-06-03 17:40:25] VERSION_ID="7"
[2025-06-03 17:40:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:40:25] ANSI_COLOR="0;31"
[2025-06-03 17:40:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:40:25] HOME_URL="https://www.centos.org/"
[2025-06-03 17:40:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:40:25] 
[2025-06-03 17:40:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:40:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:40:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:40:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:40:25] 
[2025-06-03 17:40:25] 2025-06-03 15:39:25,924 | INFO     | **************************************
[2025-06-03 17:40:25] 2025-06-03 15:39:26,428 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-03 17:40:25] 2025-06-03 15:39:26,595 | INFO     | sufficient remaining disk space (496912826368 B)
[2025-06-03 17:40:25] 2025-06-03 15:39:26,595 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:40:25] 2025-06-03 15:39:26,595 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:40:25] 2025-06-03 15:39:26,595 | INFO     | update_server=False
[2025-06-03 17:40:25] 2025-06-03 15:39:26,595 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:40:25] 2025-06-03 15:39:26,596 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 17:40:25] 2025-06-03 15:39:26,596 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:40:25] 2025-06-03 15:39:26,597 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:40:25] 2025-06-03 15:39:26,597 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:40:25] 2025-06-03 15:39:26,697 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:40:25] 2025-06-03 15:39:26,886 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 17:40:25] 2025-06-03 15:39:26,886 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 17:40:25] 2025-06-03 15:39:26,887 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:40:25] 2025-06-03 15:39:26,887 | INFO     | will abort loop
[2025-06-03 17:40:25] 2025-06-03 15:39:26,922 | INFO     | all job control threads have been joined
[2025-06-03 17:40:25] 2025-06-03 15:39:26,970 | INFO     | all data control threads have been joined
[2025-06-03 17:40:25] 2025-06-03 15:39:27,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:40:25] 2025-06-03 15:39:27,601 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:40:25] 2025-06-03 15:39:27,709 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:40:25] 2025-06-03 15:39:27,893 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:40:25] 2025-06-03 15:39:27,905 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:40:25] 2025-06-03 15:39:27,928 | INFO     | [job] control thread has finished
[2025-06-03 17:40:25] 2025-06-03 15:39:27,930 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:40:25] 2025-06-03 15:39:27,976 | INFO     | [data] control thread has finished
[2025-06-03 17:40:25] 2025-06-03 15:39:27,981 | INFO     | all payload control threads have been joined
[2025-06-03 17:40:25] 2025-06-03 15:39:28,144 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:40:25] 2025-06-03 15:39:28,311 | INFO     | [job] validate thread has finished
[2025-06-03 17:40:25] 2025-06-03 15:39:28,473 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:40:25] 2025-06-03 15:39:28,595 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:40:25] 2025-06-03 15:39:28,877 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:40:25] 2025-06-03 15:39:28,881 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:40:25] 2025-06-03 15:39:28,987 | INFO     | [payload] control thread has finished
[2025-06-03 17:40:25] 2025-06-03 15:39:29,539 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:40:25] 2025-06-03 15:39:29,601 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:40:25] 2025-06-03 15:39:30,705 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:40:25] 2025-06-03 15:39:31,963 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139981266364224)>', '<ExcThread(monitor, started 139980668122880)>']
[2025-06-03 17:40:25] 2025-06-03 15:39:32,631 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:40:25] 2025-06-03 15:39:32,631 | INFO     | [monitor] control thread has ended
[2025-06-03 17:40:25] 2025-06-03 15:39:36,989 | INFO     | all workflow threads have been joined
[2025-06-03 17:40:25] 2025-06-03 15:39:36,989 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:40:25] 2025-06-03 15:39:36,990 | INFO     | traces error code: 0
[2025-06-03 17:40:25] 2025-06-03 15:39:36,990 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:40:25] 2025-06-03 15:39:37,268 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:40:25] 2025-06-03 15:39:37,306 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:40:25] 2025-06-03 15:39:37,338 [wrapper] pilotpid: 14994
[2025-06-03 17:40:25] 2025-06-03 15:39:37,379 [wrapper] Pilot exit status: 0
[2025-06-03 17:40:25] 2025-06-03 15:39:37,764 [wrapper] pandaids: 6677419453
[2025-06-03 17:40:25] 2025-06-03 15:39:38,641 [wrapper] cleanup supervisor_pilot 25128 14995
[2025-06-03 17:40:25] 2025-06-03 15:39:38,691 [wrapper] Test setup, not cleaning
[2025-06-03 17:40:25] 2025-06-03 15:39:38,785 [wrapper] apfmon messages muted
[2025-06-03 17:40:25] 2025-06-03 15:39:38,857 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:40:25] 2025-06-03 15:39:38,969 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:40:25]  *** Error codes and diagnostics ***
[2025-06-03 17:40:25]     "exeErrorCode": 0,
[2025-06-03 17:40:25]     "exeErrorDiag": "",
[2025-06-03 17:40:25]     "pilotErrorCode": 0,
[2025-06-03 17:40:25]     "pilotErrorDiag": "",
[2025-06-03 17:40:25]  *** Listing of results directory ***
[2025-06-03 17:40:25] total 392408
[2025-06-03 17:40:25] -rwx------. 1 boinc boinc     37140 Jun  3 01:14 runpilot2-wrapper.sh
[2025-06-03 17:40:25] -rw-r--r--. 1 boinc boinc      5111 Jun  3 01:14 queuedata.json
[2025-06-03 17:40:25] -rw-r--r--. 1 boinc boinc    495897 Jun  3 01:14 pilot3.tar.gz
[2025-06-03 17:40:25] -rw-r--r--. 1 boinc boinc       100 Jun  3 13:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:40:25] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 13:37 run_atlas
[2025-06-03 17:40:25] -rw-r--r--. 1 boinc boinc       105 Jun  3 13:37 job.xml
[2025-06-03 17:40:25] -rw-r--r--. 1 boinc boinc      6390 Jun  3 13:37 init_data.xml
[2025-06-03 17:40:25] -rw-r--r--. 2 boinc boinc 216111470 Jun  3 13:37 EVNT.45006593._000565.pool.root.1
[2025-06-03 17:40:25] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:37 start_atlas.sh
[2025-06-03 17:40:25] drwxrwx--x. 2 boinc boinc        68 Jun  3 13:37 shared
[2025-06-03 17:40:25] -rw-r--r--. 2 boinc boinc    508868 Jun  3 13:37 input.tar.gz
[2025-06-03 17:40:25] -rw-r--r--. 1 boinc boinc         0 Jun  3 13:37 boinc_lockfile
[2025-06-03 17:40:25] -rw-r--r--. 1 boinc boinc      2524 Jun  3 13:37 pandaJob.out
[2025-06-03 17:40:25] -rw-------. 1 boinc boinc    982666 Jun  3 13:40 agis_schedconf.cvmfs.json
[2025-06-03 17:40:25] drwx------. 4 boinc boinc      4096 Jun  3 13:40 pilot3
[2025-06-03 17:40:25] -rw-------. 1 boinc boinc 178655835 Jun  3 17:36 HITS.45006595._014123.pool.root.1
[2025-06-03 17:40:25] -rw-r--r--. 1 boinc boinc       531 Jun  3 17:36 boinc_task_state.xml
[2025-06-03 17:40:25] -rw-------. 1 boinc boinc      1021 Jun  3 17:37 memory_monitor_summary.json
[2025-06-03 17:40:25] -rw-------. 1 boinc boinc   1603667 Jun  3 17:37 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:40:25] -rw-------. 1 boinc boinc    396286 Jun  3 17:37 log.45006595._014123.job.log.tgz.1
[2025-06-03 17:40:25] -rw-------. 1 boinc boinc        95 Jun  3 17:39 pilot_heartbeat.json
[2025-06-03 17:40:25] -rw-------. 1 boinc boinc      7702 Jun  3 17:39 heartbeat.json
[2025-06-03 17:40:25] -rw-------. 1 boinc boinc      4725 Jun  3 17:39 pilotlog.txt
[2025-06-03 17:40:25] -rw-------. 1 boinc boinc   1225662 Jun  3 17:39 log.45006595._014123.job.log.1
[2025-06-03 17:40:25] -rw-------. 1 boinc boinc       357 Jun  3 17:39 output.list
[2025-06-03 17:40:25] -rw-r--r--. 1 boinc boinc       620 Jun  3 17:39 runtime_log
[2025-06-03 17:40:25] -rw-------. 1 boinc boinc   1638400 Jun  3 17:39 result.tar.gz
[2025-06-03 17:40:25] -rw-------. 1 boinc boinc       656 Jun  3 17:39 wQTKDmlXTg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmY6gKDmR58Fdn.diag
[2025-06-03 17:40:25] -rw-r--r--. 1 boinc boinc      8659 Jun  3 17:39 runtime_log.err
[2025-06-03 17:40:25] -rw-r--r--. 1 boinc boinc      8192 Jun  3 17:40 boinc_mmap_file
[2025-06-03 17:40:25] -rw-r--r--. 1 boinc boinc        28 Jun  3 17:40 wrapper_checkpoint.txt
[2025-06-03 17:40:25] -rw-r--r--. 1 boinc boinc     20535 Jun  3 17:40 stderr.txt
[2025-06-03 17:40:25] HITS file was successfully produced:
[2025-06-03 17:40:25] -rw-------. 1 boinc boinc 178655835 Jun  3 17:36 shared/HITS.pool.root.1
[2025-06-03 17:40:25]  *** Contents of shared directory: ***
[2025-06-03 17:40:25] total 387636
[2025-06-03 17:40:25] -rw-r--r--. 2 boinc boinc 216111470 Jun  3 13:37 ATLAS.root_0
[2025-06-03 17:40:25] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:37 start_atlas.sh
[2025-06-03 17:40:25] -rw-r--r--. 2 boinc boinc    508868 Jun  3 13:37 input.tar.gz
[2025-06-03 17:40:25] -rw-------. 1 boinc boinc 178655835 Jun  3 17:36 HITS.pool.root.1
[2025-06-03 17:40:25] -rw-------. 1 boinc boinc   1638400 Jun  3 17:39 result.tar.gz
17:40:27 (11125): run_atlas exited; CPU time 49772.839228
17:40:27 (11125): called boinc_finish(0)

</stderr_txt>
]]>

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