Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:52:10 (12367): wrapper (7.7.26015): starting
10:52:10 (12367): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 10:52:10] Arguments: --nthreads 8
[2025-06-03 10:52:10] Threads: 8
[2025-06-03 10:52:10] Checking for CVMFS
[2025-06-03 10:52:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:52:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:52:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:52:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:52:12] 2.11.2.0 22848 31678 101316 146735 3 59 17175349 25165825 4635 130560 0 16705876 99.831 17148379 2496 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 10:52:12] CVMFS is ok
[2025-06-03 10:52:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:52:12] Checking for apptainer binary...
[2025-06-03 10:52:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:52:12] Running /usr/bin/apptainer --version
[2025-06-03 10:52:12] apptainer version 1.3.2-1.el7
[2025-06-03 10:52:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 10:52:20] cg-vwn482.simple-grid.lan
[2025-06-03 10:52:20] apptainer works
[2025-06-03 10:52:20] Set ATHENA_PROC_NUMBER=8
[2025-06-03 10:52:20] Set ATHENA_CORE_NUMBER=8
[2025-06-03 10:52:20] Starting ATLAS job with PandaID=6677401894
[2025-06-03 10:52:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:35:53]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:35:53] 2025-06-03 12:23:10,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:35:53] 2025-06-03 12:23:10,405 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:35:53] 2025-06-03 12:23:10,405 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:35:53] 2025-06-03 12:23:10,409 | INFO     | fitting pss+swap vs Time
[2025-06-03 15:35:53] 2025-06-03 12:23:10,410 | INFO     | sum of square deviations: 2299168690.0
[2025-06-03 15:35:53] 2025-06-03 12:23:10,411 | INFO     | sum of deviations: -36286684174.99998
[2025-06-03 15:35:53] 2025-06-03 12:23:10,411 | INFO     | mean x: 1748947376.0
[2025-06-03 15:35:53] 2025-06-03 12:23:10,412 | INFO     | mean y: 2482318.748717949
[2025-06-03 15:35:53] 2025-06-03 12:23:10,412 | INFO     | -- intersect: 27605285604.838585
[2025-06-03 15:35:53] 2025-06-03 12:23:10,412 | INFO     | intersect: 27605285604.838585
[2025-06-03 15:35:53] 2025-06-03 12:23:10,412 | INFO     | chi2: 3.614245389654833
[2025-06-03 15:35:53] 2025-06-03 12:23:10,413 | INFO     | sum of square deviations: 2126802667.5
[2025-06-03 15:35:53] 2025-06-03 12:23:10,414 | INFO     | sum of deviations: -7499074375.499995
[2025-06-03 15:35:53] 2025-06-03 12:23:10,414 | INFO     | mean x: 1748947223.5
[2025-06-03 15:35:53] 2025-06-03 12:23:10,414 | INFO     | mean y: 2507397.6578947366
[2025-06-03 15:35:53] 2025-06-03 12:23:10,414 | INFO     | -- intersect: 6169269132.665318
[2025-06-03 15:35:53] 2025-06-03 12:23:10,415 | INFO     | intersect: 6169269132.665318
[2025-06-03 15:35:53] 2025-06-03 12:23:10,415 | INFO     | chi2: 1.7221109865237594
[2025-06-03 15:35:53] 2025-06-03 12:23:10,415 | INFO     | current chi2=1.7221109865237594 (change=52.35212884401786 %)
[2025-06-03 15:35:53] 2025-06-03 12:23:10,415 | INFO     | sum of square deviations: 1963274020.0
[2025-06-03 15:35:53] 2025-06-03 12:23:10,417 | INFO     | sum of deviations: -7225788488.999992
[2025-06-03 15:35:53] 2025-06-03 12:23:10,417 | INFO     | mean x: 1748947071.0
[2025-06-03 15:35:53] 2025-06-03 12:23:10,417 | INFO     | mean y: 2507652.572972973
[2025-06-03 15:35:53] 2025-06-03 12:23:10,417 | INFO     | -- intersect: 6439470340.798253
[2025-06-03 15:35:53] 2025-06-03 12:23:10,417 | INFO     | intersect: 6439470340.798253
[2025-06-03 15:35:53] 2025-06-03 12:23:10,417 | INFO     | chi2: 1.7212732244436166
[2025-06-03 15:35:53] 2025-06-03 12:23:10,418 | INFO     | current chi2=1.7212732244436166 (change=0.04864739187535443 %)
[2025-06-03 15:35:53] 2025-06-03 12:23:10,418 | INFO     | right removable region: 184
[2025-06-03 15:35:53] 2025-06-03 12:23:10,418 | INFO     | sum of square deviations: 2126802667.5
[2025-06-03 15:35:53] 2025-06-03 12:23:10,419 | INFO     | sum of deviations: -66027583491.50001
[2025-06-03 15:35:53] 2025-06-03 12:23:10,419 | INFO     | mean x: 1748947528.5
[2025-06-03 15:35:53] 2025-06-03 12:23:10,419 | INFO     | mean y: 2508328.594736842
[2025-06-03 15:35:53] 2025-06-03 12:23:10,420 | INFO     | -- intersect: 54299402311.72509
[2025-06-03 15:35:53] 2025-06-03 12:23:10,420 | INFO     | intersect: 54299402311.72509
[2025-06-03 15:35:53] 2025-06-03 12:23:10,426 | INFO     | chi2: 2.1535545971240664
[2025-06-03 15:35:53] 2025-06-03 12:23:10,427 | INFO     | current chi2=2.1535545971240664 (change=40.41482066247487 %)
[2025-06-03 15:35:53] 2025-06-03 12:23:10,427 | INFO     | sum of square deviations: 1963274020.0
[2025-06-03 15:35:53] 2025-06-03 12:23:10,428 | INFO     | sum of deviations: -61971951978.999985
[2025-06-03 15:35:53] 2025-06-03 12:23:10,428 | INFO     | mean x: 1748947681.0
[2025-06-03 15:35:53] 2025-06-03 12:23:10,428 | INFO     | mean y: 2504509.7405405403
[2025-06-03 15:35:53] 2025-06-03 12:23:10,429 | INFO     | -- intersect: 55209113773.95083
[2025-06-03 15:35:53] 2025-06-03 12:23:10,429 | INFO     | intersect: 55209113773.95083
[2025-06-03 15:35:53] 2025-06-03 12:23:10,429 | INFO     | chi2: 2.1459085573062824
[2025-06-03 15:35:53] 2025-06-03 12:23:10,429 | INFO     | current chi2=2.1459085573062824 (change=0.35504276641023147 %)
[2025-06-03 15:35:53] 2025-06-03 12:23:10,429 | INFO     | left removable region: 20
[2025-06-03 15:35:53] 2025-06-03 12:23:10,430 | INFO     | sum of square deviations: 1367709365.0
[2025-06-03 15:35:53] 2025-06-03 12:23:10,431 | INFO     | sum of deviations: -21386250927.5
[2025-06-03 15:35:53] 2025-06-03 12:23:10,431 | INFO     | mean x: 1748947650.5
[2025-06-03 15:35:53] 2025-06-03 12:23:10,431 | INFO     | mean y: 2519504.176829268
[2025-06-03 15:35:53] 2025-06-03 12:23:10,431 | INFO     | -- intersect: 27350020566.76886
[2025-06-03 15:35:53] 2025-06-03 12:23:10,431 | INFO     | intersect: 27350020566.76886
[2025-06-03 15:35:53] 2025-06-03 12:23:10,431 | INFO     | chi2: 0.1554411244208903
[2025-06-03 15:35:53] 2025-06-03 12:23:10,432 | INFO     | -- intersect: 27350020566.76886
[2025-06-03 15:35:53] 2025-06-03 12:23:10,432 | INFO     | current memory leak: -15.64 B/s (using 164 data points, chi2=0.16)
[2025-06-03 15:35:53] 2025-06-03 12:23:10,433 | INFO     | ..............................
[2025-06-03 15:35:53] 2025-06-03 12:23:10,433 | INFO     | . Timing measurements:
[2025-06-03 15:35:53] 2025-06-03 12:23:10,433 | INFO     | . get job = 0 s
[2025-06-03 15:35:53] 2025-06-03 12:23:10,433 | INFO     | . initial setup = 11 s
[2025-06-03 15:35:53] 2025-06-03 12:23:10,433 | INFO     | . payload setup = 177 s
[2025-06-03 15:35:53] 2025-06-03 12:23:10,433 | INFO     | . stage-in = 0 s
[2025-06-03 15:35:53] 2025-06-03 12:23:10,433 | INFO     | . payload execution = 11964 s
[2025-06-03 15:35:53] 2025-06-03 12:23:10,433 | INFO     | . stage-out = 2 s
[2025-06-03 15:35:53] 2025-06-03 12:23:10,433 | INFO     | . log creation = 0 s
[2025-06-03 15:35:53] 2025-06-03 12:23:10,433 | INFO     | ..............................
[2025-06-03 15:35:53] 2025-06-03 12:23:10,562 | INFO     | 
[2025-06-03 15:35:53] 2025-06-03 12:23:10,562 | INFO     | job summary report
[2025-06-03 15:35:53] 2025-06-03 12:23:10,562 | INFO     | --------------------------------------------------
[2025-06-03 15:35:53] 2025-06-03 12:23:10,562 | INFO     | PanDA job id: 6677401894
[2025-06-03 15:35:53] 2025-06-03 12:23:10,562 | INFO     | task id: 45006595
[2025-06-03 15:35:53] 2025-06-03 12:23:10,562 | INFO     | errors: (none)
[2025-06-03 15:35:53] 2025-06-03 12:23:10,563 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:35:53] 2025-06-03 12:23:10,563 | INFO     | pilot state: finished 
[2025-06-03 15:35:53] 2025-06-03 12:23:10,563 | INFO     | transexitcode: 0
[2025-06-03 15:35:53] 2025-06-03 12:23:10,563 | INFO     | exeerrorcode: 0
[2025-06-03 15:35:53] 2025-06-03 12:23:10,563 | INFO     | exeerrordiag: 
[2025-06-03 15:35:53] 2025-06-03 12:23:10,563 | INFO     | exitcode: 0
[2025-06-03 15:35:53] 2025-06-03 12:23:10,563 | INFO     | exitmsg: OK
[2025-06-03 15:35:53] 2025-06-03 12:23:10,563 | INFO     | cpuconsumptiontime: 44285 s
[2025-06-03 15:35:53] 2025-06-03 12:23:10,563 | INFO     | nevents: 400
[2025-06-03 15:35:53] 2025-06-03 12:23:10,563 | INFO     | neventsw: 0
[2025-06-03 15:35:53] 2025-06-03 12:23:10,563 | INFO     | pid: 26452
[2025-06-03 15:35:53] 2025-06-03 12:23:10,563 | INFO     | pgrp: 26452
[2025-06-03 15:35:53] 2025-06-03 12:23:10,564 | INFO     | corecount: 8
[2025-06-03 15:35:53] 2025-06-03 12:23:10,564 | INFO     | event service: False
[2025-06-03 15:35:53] 2025-06-03 12:23:10,564 | INFO     | sizes: {0: 2405011, 1: 2405210, 12: 2405210, 22: 2405238, 33: 2405266, 44: 2405322, 55: 2405478, 65: 2405506, 76: 2405534, 87: 2405590, 97: 2405618, 99: 2406132, 1
[2025-06-03 15:35:53] 2025-06-03 12:23:10,564 | INFO     | --------------------------------------------------
[2025-06-03 15:35:53] 2025-06-03 12:23:10,564 | INFO     | 
[2025-06-03 15:35:53] 2025-06-03 12:23:10,564 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-03 15:35:53] 2025-06-03 12:23:11,083 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:35:53] 2025-06-03 12:23:11,084 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:35:53] 2025-06-03 12:23:11,084 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:35:53] 2025-06-03 12:23:11,084 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:35:53] 2025-06-03 12:23:11,084 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:35:53] 2025-06-03 12:23:11,084 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:35:53] 2025-06-03 12:23:11,084 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:35:53] 2025-06-03 12:23:11,084 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:35:53] 2025-06-03 12:23:11,085 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:35:53] 2025-06-03 12:23:11,085 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:35:53] 2025-06-03 12:23:11,085 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:35:53] 2025-06-03 12:23:11,085 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:35:53] 2025-06-03 12:23:11,085 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:35:53] 2025-06-03 12:23:11,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:35:53] 2025-06-03 12:23:11,085 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:35:53] 2025-06-03 12:23:11,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:35:53] 2025-06-03 12:23:11,085 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:35:53] 2025-06-03 12:23:11,085 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:35:53] 2025-06-03 12:23:11,085 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:35:53] 2025-06-03 12:23:11,086 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:35:53] 2025-06-03 12:23:11,086 | INFO     | job 6677401894 has completed (purged errors)
[2025-06-03 15:35:53] 2025-06-03 12:23:11,086 | INFO     | overall cleanup function is called
[2025-06-03 15:35:53] 2025-06-03 12:23:11,297 | INFO     | PID=17799 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 15:35:53] 2025-06-03 12:23:11,298 | INFO     | .. there are 9 such processes running
[2025-06-03 15:35:53] 2025-06-03 12:23:12,095 | INFO     | --- collectZombieJob: --- 10, [26452]
[2025-06-03 15:35:53] 2025-06-03 12:23:12,095 | INFO     | zombie collector waiting for pid 26452
[2025-06-03 15:35:53] 2025-06-03 12:23:12,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:35:53] 2025-06-03 12:23:12,095 | INFO     | collected zombie processes
[2025-06-03 15:35:53] 2025-06-03 12:23:12,095 | INFO     | will attempt to kill all subprocesses of pid=26452
[2025-06-03 15:35:53] 2025-06-03 12:23:12,178 | INFO     | process IDs to be killed: [26452] (in reverse order)
[2025-06-03 15:35:53] 2025-06-03 12:23:13,189 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:35:53] 2025-06-03 12:23:13,189 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:35:53] 2025-06-03 12:23:13,194 | INFO     | did not find any defunct processes belonging to 26452
[2025-06-03 15:35:53] 2025-06-03 12:23:13,197 | INFO     | did not find any defunct processes belonging to 26452
[2025-06-03 15:35:53] 2025-06-03 12:23:13,197 | INFO     | ready for new job
[2025-06-03 15:35:53] 2025-06-03 12:23:13,197 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:35:53] 2025-06-03 12:23:13,199 | INFO     | **************************************
[2025-06-03 15:35:53] 2025-06-03 12:23:13,199 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 15:35:53] 2025-06-03 12:23:13,199 | INFO     | **************************************
[2025-06-03 15:35:53] 2025-06-03 12:23:13,200 | INFO     | 
[2025-06-03 15:35:53] 2025-06-03 12:23:13,200 | INFO     | pilot is running in a VM
[2025-06-03 15:35:53] 2025-06-03 12:23:13,200 | INFO     | architecture information:
[2025-06-03 15:35:53] 2025-06-03 12:23:13,209 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:35:53] 2025-06-03 12:23:13,422 | INFO     | cat /etc/os-release:
[2025-06-03 15:35:53] NAME="CentOS Linux"
[2025-06-03 15:35:53] VERSION="7 (Core)"
[2025-06-03 15:35:53] ID="centos"
[2025-06-03 15:35:53] ID_LIKE="rhel fedora"
[2025-06-03 15:35:53] VERSION_ID="7"
[2025-06-03 15:35:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:35:53] ANSI_COLOR="0;31"
[2025-06-03 15:35:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:35:53] HOME_URL="https://www.centos.org/"
[2025-06-03 15:35:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:35:53] 
[2025-06-03 15:35:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:35:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:35:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:35:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:35:53] 
[2025-06-03 15:35:53] 2025-06-03 12:23:13,423 | INFO     | **************************************
[2025-06-03 15:35:53] 2025-06-03 12:23:13,926 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-03 15:35:53] 2025-06-03 12:23:14,130 | INFO     | sufficient remaining disk space (496862494720 B)
[2025-06-03 15:35:53] 2025-06-03 12:23:14,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:35:53] 2025-06-03 12:23:14,131 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:35:53] 2025-06-03 12:23:14,131 | INFO     | update_server=False
[2025-06-03 15:35:53] 2025-06-03 12:23:14,131 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:35:53] 2025-06-03 12:23:14,131 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 15:35:53] 2025-06-03 12:23:14,132 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:35:53] 2025-06-03 12:23:14,132 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:35:53] 2025-06-03 12:23:14,132 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:35:53] 2025-06-03 12:23:14,137 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:35:53] 2025-06-03 12:23:14,137 | INFO     | aborting loop
[2025-06-03 15:35:53] 2025-06-03 12:23:14,194 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:35:53] 2025-06-03 12:23:14,652 | INFO     | all data control threads have been joined
[2025-06-03 15:35:53] 2025-06-03 12:23:14,819 | INFO     | all payload control threads have been joined
[2025-06-03 15:35:53] 2025-06-03 12:23:15,111 | INFO     | all job control threads have been joined
[2025-06-03 15:35:53] 2025-06-03 12:23:15,137 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:35:53] 2025-06-03 12:23:15,142 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:35:53] 2025-06-03 12:23:15,147 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:35:53] 2025-06-03 12:23:15,240 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:35:53] 2025-06-03 12:23:15,310 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:35:53] 2025-06-03 12:23:15,476 | INFO     | [job] validate thread has finished
[2025-06-03 15:35:53] 2025-06-03 12:23:15,579 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:35:53] 2025-06-03 12:23:15,658 | INFO     | [data] control thread has finished
[2025-06-03 15:35:53] 2025-06-03 12:23:15,673 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:35:53] 2025-06-03 12:23:15,824 | INFO     | [payload] control thread has finished
[2025-06-03 15:35:53] 2025-06-03 12:23:15,909 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:35:53] 2025-06-03 12:23:16,010 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:35:53] 2025-06-03 12:23:16,117 | INFO     | [job] control thread has finished
[2025-06-03 15:35:53] 2025-06-03 12:23:16,140 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:35:53] 2025-06-03 12:23:16,153 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:35:53] 2025-06-03 12:23:16,585 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:35:53] 2025-06-03 12:23:17,247 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:35:53] 2025-06-03 12:23:18,203 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:35:53] 2025-06-03 12:23:19,044 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140034502952768)>', '<ExcThread(monitor, started 140033851913984)>']
[2025-06-03 15:35:53] 2025-06-03 12:23:19,161 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:35:53] 2025-06-03 12:23:19,161 | INFO     | [monitor] control thread has ended
[2025-06-03 15:35:53] 2025-06-03 12:23:24,070 | INFO     | all workflow threads have been joined
[2025-06-03 15:35:53] 2025-06-03 12:23:24,070 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:35:53] 2025-06-03 12:23:24,070 | INFO     | traces error code: 0
[2025-06-03 15:35:53] 2025-06-03 12:23:24,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:35:53] 2025-06-03 12:23:24,420 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:35:53] 2025-06-03 12:23:24,511 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:35:53] 2025-06-03 12:23:24,612 [wrapper] pilotpid: 17799
[2025-06-03 15:35:53] 2025-06-03 12:23:24,728 [wrapper] Pilot exit status: 0
[2025-06-03 15:35:53] 2025-06-03 12:23:25,130 [wrapper] pandaids: 6677401894
[2025-06-03 15:35:53] 2025-06-03 12:23:25,639 [wrapper] cleanup supervisor_pilot 18217 17800
[2025-06-03 15:35:53] 2025-06-03 12:23:25,703 [wrapper] Test setup, not cleaning
[2025-06-03 15:35:53] 2025-06-03 12:23:25,790 [wrapper] apfmon messages muted
[2025-06-03 15:35:53] 2025-06-03 12:23:25,856 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:35:53] 2025-06-03 12:23:26,001 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:35:53]  *** Error codes and diagnostics ***
[2025-06-03 15:35:53]     "exeErrorCode": 0,
[2025-06-03 15:35:53]     "exeErrorDiag": "",
[2025-06-03 15:35:53]     "pilotErrorCode": 0,
[2025-06-03 15:35:53]     "pilotErrorDiag": "",
[2025-06-03 15:35:53]  *** Listing of results directory ***
[2025-06-03 15:35:53] total 390472
[2025-06-03 15:35:53] -rw-r--r--. 1 boinc boinc    495897 Jun  2 23:10 pilot3.tar.gz
[2025-06-03 15:35:53] -rwx------. 1 boinc boinc     37140 Jun  2 23:29 runpilot2-wrapper.sh
[2025-06-03 15:35:53] -rw-r--r--. 1 boinc boinc      5111 Jun  2 23:29 queuedata.json
[2025-06-03 15:35:53] -rw-r--r--. 1 boinc boinc       100 Jun  3 10:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:35:53] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 10:52 run_atlas
[2025-06-03 15:35:53] -rw-r--r--. 1 boinc boinc       105 Jun  3 10:52 job.xml
[2025-06-03 15:35:53] -rw-r--r--. 2 boinc boinc 216016929 Jun  3 10:52 EVNT.45006593._000494.pool.root.1
[2025-06-03 15:35:53] -rw-r--r--. 1 boinc boinc      6391 Jun  3 10:52 init_data.xml
[2025-06-03 15:35:53] -rw-r--r--. 2 boinc boinc     15093 Jun  3 10:52 start_atlas.sh
[2025-06-03 15:35:53] drwxrwx--x. 2 boinc boinc        68 Jun  3 10:52 shared
[2025-06-03 15:35:53] -rw-r--r--. 2 boinc boinc    508864 Jun  3 10:52 input.tar.gz
[2025-06-03 15:35:53] -rw-r--r--. 1 boinc boinc         0 Jun  3 10:52 boinc_lockfile
[2025-06-03 15:35:53] -rw-r--r--. 1 boinc boinc      2524 Jun  3 10:52 pandaJob.out
[2025-06-03 15:35:53] -rw-------. 1 boinc boinc    985498 Jun  3 10:55 agis_schedconf.cvmfs.json
[2025-06-03 15:35:53] drwx------. 4 boinc boinc      4096 Jun  3 10:55 pilot3
[2025-06-03 15:35:53] -rw-------. 1 boinc boinc 177116400 Jun  3 14:20 HITS.45006595._012348.pool.root.1
[2025-06-03 15:35:53] -rw-r--r--. 1 boinc boinc       531 Jun  3 14:20 boinc_task_state.xml
[2025-06-03 15:35:53] -rw-------. 1 boinc boinc      1019 Jun  3 14:21 memory_monitor_summary.json
[2025-06-03 15:35:53] -rw-------. 1 boinc boinc   1603667 Jun  3 14:21 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:35:53] -rw-------. 1 boinc boinc    378802 Jun  3 14:21 log.45006595._012348.job.log.tgz.1
[2025-06-03 15:35:53] -rw-------. 1 boinc boinc        95 Jun  3 14:22 pilot_heartbeat.json
[2025-06-03 15:35:53] -rw-------. 1 boinc boinc      7693 Jun  3 14:23 heartbeat.json
[2025-06-03 15:35:53] -rw-------. 1 boinc boinc      4539 Jun  3 14:23 pilotlog.txt
[2025-06-03 15:35:53] -rw-------. 1 boinc boinc   1063038 Jun  3 14:23 log.45006595._012348.job.log.1
[2025-06-03 15:35:53] -rw-------. 1 boinc boinc       357 Jun  3 14:23 output.list
[2025-06-03 15:35:53] -rw-r--r--. 1 boinc boinc       620 Jun  3 14:23 runtime_log
[2025-06-03 15:35:53] -rw-------. 1 boinc boinc   1464320 Jun  3 14:23 result.tar.gz
[2025-06-03 15:35:53] -rw-r--r--. 1 boinc boinc      8659 Jun  3 14:23 runtime_log.err
[2025-06-03 15:35:53] -rw-------. 1 boinc boinc       656 Jun  3 14:23 IJDMDm7tRg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm4fWKDmxWrnkn.diag
[2025-06-03 15:35:53] -rw-r--r--. 1 boinc boinc      8192 Jun  3 15:35 boinc_mmap_file
[2025-06-03 15:35:53] -rw-r--r--. 1 boinc boinc        28 Jun  3 15:35 wrapper_checkpoint.txt
[2025-06-03 15:35:53] -rw-r--r--. 1 boinc boinc     20629 Jun  3 15:35 stderr.txt
[2025-06-03 15:35:53] HITS file was successfully produced:
[2025-06-03 15:35:54] -rw-------. 1 boinc boinc 177116400 Jun  3 14:20 shared/HITS.pool.root.1
[2025-06-03 15:35:54]  *** Contents of shared directory: ***
[2025-06-03 15:35:54] total 385872
[2025-06-03 15:35:54] -rw-r--r--. 2 boinc boinc 216016929 Jun  3 10:52 ATLAS.root_0
[2025-06-03 15:35:54] -rw-r--r--. 2 boinc boinc     15093 Jun  3 10:52 start_atlas.sh
[2025-06-03 15:35:54] -rw-r--r--. 2 boinc boinc    508864 Jun  3 10:52 input.tar.gz
[2025-06-03 15:35:54] -rw-------. 1 boinc boinc 177116400 Jun  3 14:20 HITS.pool.root.1
[2025-06-03 15:35:54] -rw-------. 1 boinc boinc   1464320 Jun  3 14:23 result.tar.gz
15:35:55 (12367): run_atlas exited; CPU time 44437.860638
15:35:55 (12367): called boinc_finish(0)

</stderr_txt>
]]>

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